Multiple sequence alignment - TraesCS2D01G496500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G496500 chr2D 100.000 3365 0 0 1 3365 592792849 592789485 0.000000e+00 6215.0
1 TraesCS2D01G496500 chr2D 95.973 149 6 0 3217 3365 83920591 83920443 3.350000e-60 243.0
2 TraesCS2D01G496500 chr2D 98.214 112 2 0 2420 2531 349931349 349931238 2.650000e-46 196.0
3 TraesCS2D01G496500 chr2D 96.581 117 3 1 2417 2532 87030968 87031084 3.430000e-45 193.0
4 TraesCS2D01G496500 chr2A 96.539 1618 48 5 812 2426 727245914 727244302 0.000000e+00 2671.0
5 TraesCS2D01G496500 chr2A 88.866 485 36 9 2724 3197 727244118 727243641 6.260000e-162 580.0
6 TraesCS2D01G496500 chr2A 81.224 490 74 16 1823 2303 727917769 727917289 2.450000e-101 379.0
7 TraesCS2D01G496500 chr2B 95.420 1572 49 9 812 2376 718970527 718968972 0.000000e+00 2483.0
8 TraesCS2D01G496500 chr2B 90.909 451 19 9 19 457 718971390 718970950 1.350000e-163 586.0
9 TraesCS2D01G496500 chr2B 80.290 482 78 15 1823 2294 719293457 719292983 6.910000e-92 348.0
10 TraesCS2D01G496500 chr2B 85.778 225 26 5 2828 3050 718968921 718968701 2.020000e-57 233.0
11 TraesCS2D01G496500 chr2B 92.308 130 8 2 2420 2549 766568159 766568286 2.060000e-42 183.0
12 TraesCS2D01G496500 chr7D 80.160 499 79 18 1813 2303 416237841 416237355 4.130000e-94 355.0
13 TraesCS2D01G496500 chr7D 81.170 393 68 6 1094 1483 416238591 416238202 9.070000e-81 311.0
14 TraesCS2D01G496500 chr7D 87.629 194 15 6 3173 3365 24559375 24559190 2.030000e-52 217.0
15 TraesCS2D01G496500 chr7D 98.182 110 2 0 2422 2531 21093604 21093713 3.430000e-45 193.0
16 TraesCS2D01G496500 chr7D 84.375 96 13 2 632 727 494673681 494673588 3.570000e-15 93.5
17 TraesCS2D01G496500 chr7D 86.250 80 8 1 643 722 510397832 510397756 2.150000e-12 84.2
18 TraesCS2D01G496500 chr7B 80.000 500 78 20 1813 2303 431662987 431662501 1.920000e-92 350.0
19 TraesCS2D01G496500 chr7B 77.953 381 64 14 1121 1483 431663726 431663348 1.570000e-53 220.0
20 TraesCS2D01G496500 chr7B 96.396 111 4 0 2620 2730 523682081 523681971 2.060000e-42 183.0
21 TraesCS2D01G496500 chr7A 79.317 498 85 18 1813 2303 478502748 478502262 1.930000e-87 333.0
22 TraesCS2D01G496500 chr7A 79.847 392 75 4 1094 1483 478503498 478503109 1.980000e-72 283.0
23 TraesCS2D01G496500 chr4D 87.629 194 15 6 3173 3365 348483990 348484175 2.030000e-52 217.0
24 TraesCS2D01G496500 chr4D 87.113 194 16 6 3173 3365 38630501 38630686 9.460000e-51 211.0
25 TraesCS2D01G496500 chr4D 87.113 194 15 7 3173 3365 117267167 117267351 9.460000e-51 211.0
26 TraesCS2D01G496500 chr4D 87.113 194 16 6 3173 3365 397957439 397957254 9.460000e-51 211.0
27 TraesCS2D01G496500 chr4D 84.270 89 11 1 633 721 218516283 218516198 2.150000e-12 84.2
28 TraesCS2D01G496500 chr4D 88.732 71 5 1 643 713 497247569 497247636 2.150000e-12 84.2
29 TraesCS2D01G496500 chr4D 87.671 73 6 1 649 721 161255348 161255417 7.740000e-12 82.4
30 TraesCS2D01G496500 chr4D 84.706 85 10 1 643 727 333063283 333063364 7.740000e-12 82.4
31 TraesCS2D01G496500 chr4D 82.292 96 13 2 633 728 479997578 479997669 2.780000e-11 80.5
32 TraesCS2D01G496500 chr4D 83.529 85 11 1 643 727 371926888 371926807 3.600000e-10 76.8
33 TraesCS2D01G496500 chr4D 87.143 70 6 2 643 712 394295052 394295118 3.600000e-10 76.8
34 TraesCS2D01G496500 chr3D 87.629 194 15 6 3173 3365 392990578 392990763 2.030000e-52 217.0
35 TraesCS2D01G496500 chr3D 89.130 138 10 5 2586 2721 612130603 612130737 2.080000e-37 167.0
36 TraesCS2D01G496500 chr3D 84.783 92 11 1 632 723 441134572 441134484 4.620000e-14 89.8
37 TraesCS2D01G496500 chr3D 84.211 95 12 1 633 727 562507951 562507860 4.620000e-14 89.8
38 TraesCS2D01G496500 chr3D 81.818 99 14 2 629 727 563633892 563633798 2.780000e-11 80.5
39 TraesCS2D01G496500 chr1D 87.565 193 15 6 3174 3365 74584916 74584732 7.310000e-52 215.0
40 TraesCS2D01G496500 chr1D 84.375 96 12 1 627 722 409047047 409047139 1.290000e-14 91.6
41 TraesCS2D01G496500 chr1D 85.542 83 8 3 642 720 354500775 354500693 2.150000e-12 84.2
42 TraesCS2D01G496500 chr1D 84.337 83 8 3 642 724 121317086 121317009 3.600000e-10 76.8
43 TraesCS2D01G496500 chr1D 83.529 85 11 1 642 726 124334412 124334331 3.600000e-10 76.8
44 TraesCS2D01G496500 chrUn 87.113 194 16 7 3173 3365 103856231 103856046 9.460000e-51 211.0
45 TraesCS2D01G496500 chrUn 85.000 80 9 1 643 722 104668882 104668806 1.000000e-10 78.7
46 TraesCS2D01G496500 chrUn 84.810 79 8 2 643 720 84435390 84435465 3.600000e-10 76.8
47 TraesCS2D01G496500 chrUn 84.810 79 9 1 642 720 197752470 197752395 3.600000e-10 76.8
48 TraesCS2D01G496500 chrUn 84.615 78 9 1 643 720 31861220 31861294 1.290000e-09 75.0
49 TraesCS2D01G496500 chrUn 85.135 74 8 1 647 720 65138883 65138953 4.660000e-09 73.1
50 TraesCS2D01G496500 chrUn 93.023 43 3 0 678 720 19086489 19086531 2.800000e-06 63.9
51 TraesCS2D01G496500 chrUn 84.127 63 7 2 643 705 446005898 446005957 1.300000e-04 58.4
52 TraesCS2D01G496500 chr3A 96.581 117 3 1 2422 2537 550641836 550641952 3.430000e-45 193.0
53 TraesCS2D01G496500 chr3A 94.783 115 5 1 2608 2721 308676039 308675925 9.590000e-41 178.0
54 TraesCS2D01G496500 chr5A 95.798 119 4 1 2421 2539 7007325 7007442 1.230000e-44 191.0
55 TraesCS2D01G496500 chr5A 85.106 94 10 2 627 720 373428576 373428665 3.570000e-15 93.5
56 TraesCS2D01G496500 chr4A 96.552 116 3 1 2416 2531 593739138 593739024 1.230000e-44 191.0
57 TraesCS2D01G496500 chr4A 91.603 131 10 1 2418 2548 591880726 591880597 2.670000e-41 180.0
58 TraesCS2D01G496500 chr6B 99.038 104 1 0 2618 2721 20752495 20752598 1.590000e-43 187.0
59 TraesCS2D01G496500 chr6A 92.366 131 7 3 2424 2554 130415885 130415758 2.060000e-42 183.0
60 TraesCS2D01G496500 chr6A 84.043 94 11 2 633 726 594831610 594831699 1.660000e-13 87.9
61 TraesCS2D01G496500 chr6D 95.614 114 3 2 2608 2721 132306862 132306973 7.420000e-42 182.0
62 TraesCS2D01G496500 chr6D 97.059 102 3 0 2620 2721 419759794 419759895 4.460000e-39 172.0
63 TraesCS2D01G496500 chr6D 85.882 85 9 1 643 727 78083089 78083170 1.660000e-13 87.9
64 TraesCS2D01G496500 chr6D 85.366 82 8 2 642 722 120657652 120657574 7.740000e-12 82.4
65 TraesCS2D01G496500 chr6D 85.897 78 8 1 643 720 157587420 157587494 2.780000e-11 80.5
66 TraesCS2D01G496500 chr6D 81.132 106 14 4 617 720 387886091 387885990 2.780000e-11 80.5
67 TraesCS2D01G496500 chr5B 96.364 110 4 0 2612 2721 640126612 640126721 7.420000e-42 182.0
68 TraesCS2D01G496500 chr5B 90.580 138 10 3 2620 2756 697185041 697184906 2.670000e-41 180.0
69 TraesCS2D01G496500 chr1A 96.364 110 4 0 2612 2721 397969075 397969184 7.420000e-42 182.0
70 TraesCS2D01G496500 chr1A 82.828 99 13 2 622 720 544367824 544367918 5.980000e-13 86.1
71 TraesCS2D01G496500 chr1A 81.443 97 14 2 618 713 590819564 590819657 3.600000e-10 76.8
72 TraesCS2D01G496500 chr4B 83.696 92 14 1 633 724 34029046 34029136 5.980000e-13 86.1
73 TraesCS2D01G496500 chr3B 85.484 62 4 3 2504 2563 540460712 540460654 3.630000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G496500 chr2D 592789485 592792849 3364 True 6215.000000 6215 100.000000 1 3365 1 chr2D.!!$R3 3364
1 TraesCS2D01G496500 chr2A 727243641 727245914 2273 True 1625.500000 2671 92.702500 812 3197 2 chr2A.!!$R2 2385
2 TraesCS2D01G496500 chr2B 718968701 718971390 2689 True 1100.666667 2483 90.702333 19 3050 3 chr2B.!!$R2 3031
3 TraesCS2D01G496500 chr7D 416237355 416238591 1236 True 333.000000 355 80.665000 1094 2303 2 chr7D.!!$R4 1209
4 TraesCS2D01G496500 chr7B 431662501 431663726 1225 True 285.000000 350 78.976500 1121 2303 2 chr7B.!!$R2 1182
5 TraesCS2D01G496500 chr7A 478502262 478503498 1236 True 308.000000 333 79.582000 1094 2303 2 chr7A.!!$R1 1209

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.038343 ATGAATTGTTGCCCGTGTGC 60.038 50.0 0.00 0.00 0.00 4.57 F
90 91 0.108089 TGTTGCCCGTGTGCGTATAT 60.108 50.0 0.00 0.00 36.15 0.86 F
138 139 0.250038 AGGAATCCCACATCGATGCG 60.250 55.0 25.11 15.92 33.88 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1839 2121 1.406219 CGATCACCGAGTTGAGCACG 61.406 60.000 0.00 0.0 41.76 5.34 R
2351 2633 2.745281 TCAGTAATTTACGGCAACCAGC 59.255 45.455 2.26 0.0 44.65 4.85 R
2385 2667 0.032952 TATACCGGGATGCAACGCTC 59.967 55.000 10.31 0.0 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.638610 TGTGTGTTCTTTGTTTGAATGGATT 58.361 32.000 0.00 0.00 0.00 3.01
84 85 0.038343 ATGAATTGTTGCCCGTGTGC 60.038 50.000 0.00 0.00 0.00 4.57
87 88 1.167155 AATTGTTGCCCGTGTGCGTA 61.167 50.000 0.00 0.00 36.15 4.42
90 91 0.108089 TGTTGCCCGTGTGCGTATAT 60.108 50.000 0.00 0.00 36.15 0.86
138 139 0.250038 AGGAATCCCACATCGATGCG 60.250 55.000 25.11 15.92 33.88 4.73
153 154 2.178273 GCGGACGCAAACAATCCC 59.822 61.111 12.31 0.00 41.49 3.85
205 206 1.140852 CTGGTCACTCCCAACAGACAA 59.859 52.381 0.00 0.00 33.07 3.18
239 240 2.050714 GTCCACGTCGACGCAGAA 60.051 61.111 35.92 17.34 44.43 3.02
240 241 1.443872 GTCCACGTCGACGCAGAAT 60.444 57.895 35.92 15.18 44.43 2.40
241 242 1.154093 TCCACGTCGACGCAGAATC 60.154 57.895 35.92 0.00 44.43 2.52
242 243 2.497092 CCACGTCGACGCAGAATCG 61.497 63.158 35.92 15.79 44.43 3.34
243 244 1.796355 CACGTCGACGCAGAATCGT 60.796 57.895 35.92 12.80 46.38 3.73
263 264 3.440173 CGTTATCCTTGGATGTGCAGTTT 59.560 43.478 12.08 0.00 0.00 2.66
284 285 1.864029 GCCACGCAACTTCAAAAGTCC 60.864 52.381 0.00 0.00 41.91 3.85
290 291 2.119457 CAACTTCAAAAGTCCTTGCGC 58.881 47.619 0.00 0.00 41.91 6.09
341 342 3.479203 CCCGGGAGCACCAGCATA 61.479 66.667 18.48 0.00 45.49 3.14
347 348 0.322008 GGAGCACCAGCATATAGGCC 60.322 60.000 5.61 0.00 45.49 5.19
374 379 1.710013 TTCGTTCATGTTCTCGCCTC 58.290 50.000 0.00 0.00 0.00 4.70
383 388 4.507756 TCATGTTCTCGCCTCAATATTTCG 59.492 41.667 0.00 0.00 0.00 3.46
391 396 6.934645 TCTCGCCTCAATATTTCGGATATTTT 59.065 34.615 4.35 0.00 0.00 1.82
438 451 0.463833 GTCCCTACATCGCCCCAAAG 60.464 60.000 0.00 0.00 0.00 2.77
457 470 1.004745 AGGTCAAACCAGCATACCCTG 59.995 52.381 0.00 0.00 41.95 4.45
466 479 4.569180 CATACCCTGCTGGCCCCG 62.569 72.222 0.00 0.00 37.83 5.73
467 480 4.815973 ATACCCTGCTGGCCCCGA 62.816 66.667 0.00 0.00 37.83 5.14
468 481 4.815973 TACCCTGCTGGCCCCGAT 62.816 66.667 0.00 0.00 37.83 4.18
470 483 4.447342 CCCTGCTGGCCCCGATTT 62.447 66.667 0.00 0.00 0.00 2.17
471 484 2.362889 CCTGCTGGCCCCGATTTT 60.363 61.111 0.00 0.00 0.00 1.82
472 485 1.077068 CCTGCTGGCCCCGATTTTA 60.077 57.895 0.00 0.00 0.00 1.52
473 486 0.468029 CCTGCTGGCCCCGATTTTAT 60.468 55.000 0.00 0.00 0.00 1.40
474 487 1.402787 CTGCTGGCCCCGATTTTATT 58.597 50.000 0.00 0.00 0.00 1.40
475 488 1.338020 CTGCTGGCCCCGATTTTATTC 59.662 52.381 0.00 0.00 0.00 1.75
476 489 1.341482 TGCTGGCCCCGATTTTATTCA 60.341 47.619 0.00 0.00 0.00 2.57
477 490 1.963515 GCTGGCCCCGATTTTATTCAT 59.036 47.619 0.00 0.00 0.00 2.57
478 491 2.288395 GCTGGCCCCGATTTTATTCATG 60.288 50.000 0.00 0.00 0.00 3.07
479 492 1.686052 TGGCCCCGATTTTATTCATGC 59.314 47.619 0.00 0.00 0.00 4.06
480 493 1.963515 GGCCCCGATTTTATTCATGCT 59.036 47.619 0.00 0.00 0.00 3.79
481 494 2.288395 GGCCCCGATTTTATTCATGCTG 60.288 50.000 0.00 0.00 0.00 4.41
482 495 2.863704 GCCCCGATTTTATTCATGCTGC 60.864 50.000 0.00 0.00 0.00 5.25
483 496 2.605338 CCCCGATTTTATTCATGCTGCG 60.605 50.000 0.00 0.00 0.00 5.18
484 497 2.046313 CCGATTTTATTCATGCTGCGC 58.954 47.619 0.00 0.00 0.00 6.09
485 498 2.287188 CCGATTTTATTCATGCTGCGCT 60.287 45.455 9.73 0.00 0.00 5.92
486 499 3.365832 CGATTTTATTCATGCTGCGCTT 58.634 40.909 9.73 0.00 0.00 4.68
487 500 4.526625 CGATTTTATTCATGCTGCGCTTA 58.473 39.130 9.73 0.00 0.00 3.09
488 501 5.149273 CGATTTTATTCATGCTGCGCTTAT 58.851 37.500 9.73 0.00 0.00 1.73
489 502 5.058856 CGATTTTATTCATGCTGCGCTTATG 59.941 40.000 9.73 10.69 0.00 1.90
490 503 2.975410 TATTCATGCTGCGCTTATGC 57.025 45.000 9.73 8.62 0.00 3.14
491 504 1.315690 ATTCATGCTGCGCTTATGCT 58.684 45.000 9.73 0.00 36.97 3.79
492 505 1.097232 TTCATGCTGCGCTTATGCTT 58.903 45.000 9.73 3.50 36.97 3.91
493 506 1.097232 TCATGCTGCGCTTATGCTTT 58.903 45.000 9.73 0.00 36.97 3.51
494 507 1.197055 CATGCTGCGCTTATGCTTTG 58.803 50.000 9.73 6.66 36.97 2.77
495 508 0.813184 ATGCTGCGCTTATGCTTTGT 59.187 45.000 9.73 0.00 36.97 2.83
496 509 0.597568 TGCTGCGCTTATGCTTTGTT 59.402 45.000 9.73 0.00 36.97 2.83
497 510 1.000385 TGCTGCGCTTATGCTTTGTTT 60.000 42.857 9.73 0.00 36.97 2.83
498 511 2.061028 GCTGCGCTTATGCTTTGTTTT 58.939 42.857 9.73 0.00 36.97 2.43
499 512 2.476241 GCTGCGCTTATGCTTTGTTTTT 59.524 40.909 9.73 0.00 36.97 1.94
522 535 7.739498 TTTGTCAAAGGTCAAATACTACTCC 57.261 36.000 0.00 0.00 29.21 3.85
523 536 5.801380 TGTCAAAGGTCAAATACTACTCCC 58.199 41.667 0.00 0.00 0.00 4.30
524 537 5.546499 TGTCAAAGGTCAAATACTACTCCCT 59.454 40.000 0.00 0.00 0.00 4.20
525 538 6.043938 TGTCAAAGGTCAAATACTACTCCCTT 59.956 38.462 0.00 0.00 32.39 3.95
526 539 6.594547 GTCAAAGGTCAAATACTACTCCCTTC 59.405 42.308 0.00 0.00 30.77 3.46
527 540 6.500751 TCAAAGGTCAAATACTACTCCCTTCT 59.499 38.462 0.00 0.00 30.77 2.85
528 541 6.954352 AAGGTCAAATACTACTCCCTTCTT 57.046 37.500 0.00 0.00 0.00 2.52
529 542 6.547930 AGGTCAAATACTACTCCCTTCTTC 57.452 41.667 0.00 0.00 0.00 2.87
530 543 5.425862 AGGTCAAATACTACTCCCTTCTTCC 59.574 44.000 0.00 0.00 0.00 3.46
531 544 5.349809 GTCAAATACTACTCCCTTCTTCCG 58.650 45.833 0.00 0.00 0.00 4.30
532 545 5.126707 GTCAAATACTACTCCCTTCTTCCGA 59.873 44.000 0.00 0.00 0.00 4.55
534 547 6.211986 TCAAATACTACTCCCTTCTTCCGAAA 59.788 38.462 0.00 0.00 0.00 3.46
536 549 6.809976 ATACTACTCCCTTCTTCCGAAATT 57.190 37.500 0.00 0.00 0.00 1.82
541 554 6.759497 ACTCCCTTCTTCCGAAATTATTTG 57.241 37.500 0.00 0.00 0.00 2.32
543 556 6.719829 ACTCCCTTCTTCCGAAATTATTTGTT 59.280 34.615 0.00 0.00 0.00 2.83
544 557 7.886446 ACTCCCTTCTTCCGAAATTATTTGTTA 59.114 33.333 0.00 0.00 0.00 2.41
545 558 8.047413 TCCCTTCTTCCGAAATTATTTGTTAC 57.953 34.615 0.00 0.00 0.00 2.50
546 559 6.964934 CCCTTCTTCCGAAATTATTTGTTACG 59.035 38.462 0.00 0.00 0.00 3.18
547 560 7.148373 CCCTTCTTCCGAAATTATTTGTTACGA 60.148 37.037 0.00 0.00 0.00 3.43
643 656 6.702723 TGCATGTAAGTACGTACTTCTTTTGT 59.297 34.615 37.09 19.19 44.77 2.83
645 658 7.115947 GCATGTAAGTACGTACTTCTTTTGTCT 59.884 37.037 37.09 17.86 44.77 3.41
647 660 7.706159 TGTAAGTACGTACTTCTTTTGTCTCA 58.294 34.615 37.09 17.78 44.77 3.27
648 661 8.355169 TGTAAGTACGTACTTCTTTTGTCTCAT 58.645 33.333 37.09 16.54 44.77 2.90
649 662 9.831737 GTAAGTACGTACTTCTTTTGTCTCATA 57.168 33.333 37.09 17.13 44.77 2.15
651 664 9.924650 AAGTACGTACTTCTTTTGTCTCATAAT 57.075 29.630 30.57 6.93 42.52 1.28
711 724 8.433126 CAAAAACGCTCTTATATTATAGGACGG 58.567 37.037 15.28 5.50 0.00 4.79
712 725 7.458409 AAACGCTCTTATATTATAGGACGGA 57.542 36.000 15.28 0.00 0.00 4.69
713 726 7.458409 AACGCTCTTATATTATAGGACGGAA 57.542 36.000 15.28 0.00 0.00 4.30
732 745 7.885399 GGACGGAAAGAGTAGTATATACCCTTA 59.115 40.741 9.32 0.00 0.00 2.69
733 746 9.289782 GACGGAAAGAGTAGTATATACCCTTAA 57.710 37.037 9.32 0.00 0.00 1.85
734 747 9.646522 ACGGAAAGAGTAGTATATACCCTTAAA 57.353 33.333 9.32 0.00 0.00 1.52
792 805 8.357402 ACATTTAAGTTATTGGAAGTGTGGAAC 58.643 33.333 0.00 0.00 37.35 3.62
804 817 0.250467 TGTGGAACTCTTGCTCCTGC 60.250 55.000 0.00 0.00 38.04 4.85
810 823 0.907486 ACTCTTGCTCCTGCTGCATA 59.093 50.000 1.31 0.00 40.34 3.14
827 1036 4.119862 TGCATATAGAAACAGGAAGCGTC 58.880 43.478 0.00 0.00 0.00 5.19
849 1058 6.349115 CGTCCACTGAGTATATATACACCACC 60.349 46.154 22.00 8.34 35.74 4.61
881 1090 0.318275 GCGCCAAACAACAATCGGAA 60.318 50.000 0.00 0.00 0.00 4.30
966 1175 3.095421 CCCCCACCCACAGCAATA 58.905 61.111 0.00 0.00 0.00 1.90
967 1176 1.379843 CCCCCACCCACAGCAATAC 60.380 63.158 0.00 0.00 0.00 1.89
968 1177 1.691219 CCCCACCCACAGCAATACT 59.309 57.895 0.00 0.00 0.00 2.12
969 1178 0.394352 CCCCACCCACAGCAATACTC 60.394 60.000 0.00 0.00 0.00 2.59
970 1179 0.394352 CCCACCCACAGCAATACTCC 60.394 60.000 0.00 0.00 0.00 3.85
2223 2505 2.743538 GTGATGCTGGTCTGCGCA 60.744 61.111 10.98 10.98 40.87 6.09
2385 2667 7.164171 CCGTAAATTACTGAATTGAATGCTTCG 59.836 37.037 1.42 0.00 35.38 3.79
2386 2668 7.902917 CGTAAATTACTGAATTGAATGCTTCGA 59.097 33.333 1.42 0.00 35.38 3.71
2405 2687 0.249741 AGCGTTGCATCCCGGTATAC 60.250 55.000 0.00 0.00 32.36 1.47
2436 2757 4.101119 CCATTTGTATCTACTCCCTCCGTT 59.899 45.833 0.00 0.00 0.00 4.44
2438 2759 2.941480 TGTATCTACTCCCTCCGTTCC 58.059 52.381 0.00 0.00 0.00 3.62
2439 2760 1.878734 GTATCTACTCCCTCCGTTCCG 59.121 57.143 0.00 0.00 0.00 4.30
2442 2763 1.064166 TCTACTCCCTCCGTTCCGAAT 60.064 52.381 0.00 0.00 0.00 3.34
2451 2772 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
2452 2773 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
2453 2774 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
2456 2777 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
2458 2779 2.601763 CCGAATTACTTGTCGCAGGTAC 59.398 50.000 2.27 0.00 35.93 3.34
2462 2783 1.466856 TACTTGTCGCAGGTACGGAT 58.533 50.000 0.00 0.00 0.00 4.18
2463 2784 0.108804 ACTTGTCGCAGGTACGGATG 60.109 55.000 0.00 0.00 0.00 3.51
2465 2786 1.133598 CTTGTCGCAGGTACGGATGTA 59.866 52.381 0.00 0.00 0.00 2.29
2466 2787 1.395635 TGTCGCAGGTACGGATGTAT 58.604 50.000 0.00 0.00 32.11 2.29
2467 2788 1.335810 TGTCGCAGGTACGGATGTATC 59.664 52.381 0.00 0.00 32.11 2.24
2468 2789 1.607628 GTCGCAGGTACGGATGTATCT 59.392 52.381 0.00 0.00 42.88 1.98
2469 2790 2.810274 GTCGCAGGTACGGATGTATCTA 59.190 50.000 0.00 0.00 40.09 1.98
2470 2791 3.072211 TCGCAGGTACGGATGTATCTAG 58.928 50.000 0.00 0.00 40.09 2.43
2471 2792 3.072211 CGCAGGTACGGATGTATCTAGA 58.928 50.000 0.00 0.00 40.09 2.43
2472 2793 3.690139 CGCAGGTACGGATGTATCTAGAT 59.310 47.826 10.73 10.73 40.09 1.98
2473 2794 4.437524 CGCAGGTACGGATGTATCTAGATG 60.438 50.000 15.79 0.00 40.09 2.90
2474 2795 4.459685 GCAGGTACGGATGTATCTAGATGT 59.540 45.833 15.79 5.98 40.09 3.06
2475 2796 5.646793 GCAGGTACGGATGTATCTAGATGTA 59.353 44.000 15.79 5.00 40.09 2.29
2476 2797 6.319152 GCAGGTACGGATGTATCTAGATGTAT 59.681 42.308 15.79 9.11 40.09 2.29
2477 2798 7.148052 GCAGGTACGGATGTATCTAGATGTATT 60.148 40.741 15.79 0.00 40.09 1.89
2478 2799 8.740906 CAGGTACGGATGTATCTAGATGTATTT 58.259 37.037 15.79 0.00 40.09 1.40
2479 2800 9.310449 AGGTACGGATGTATCTAGATGTATTTT 57.690 33.333 15.79 0.00 40.28 1.82
2507 2828 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
2512 2833 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
2515 2836 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
2516 2837 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
2517 2838 4.092821 CCATTTCTGCGACGAGTAATTTGA 59.907 41.667 0.00 0.00 0.00 2.69
2518 2839 5.390461 CCATTTCTGCGACGAGTAATTTGAA 60.390 40.000 0.00 0.00 0.00 2.69
2532 2853 7.427989 AGTAATTTGAAACGGAGGGAGTATA 57.572 36.000 0.00 0.00 0.00 1.47
2533 2854 8.030913 AGTAATTTGAAACGGAGGGAGTATAT 57.969 34.615 0.00 0.00 0.00 0.86
2534 2855 8.148999 AGTAATTTGAAACGGAGGGAGTATATC 58.851 37.037 0.00 0.00 0.00 1.63
2535 2856 6.749036 ATTTGAAACGGAGGGAGTATATCT 57.251 37.500 0.00 0.00 0.00 1.98
2536 2857 7.850935 ATTTGAAACGGAGGGAGTATATCTA 57.149 36.000 0.00 0.00 0.00 1.98
2537 2858 7.850935 TTTGAAACGGAGGGAGTATATCTAT 57.149 36.000 0.00 0.00 0.00 1.98
2539 2860 8.577048 TTGAAACGGAGGGAGTATATCTATAG 57.423 38.462 0.00 0.00 0.00 1.31
2540 2861 7.117397 TGAAACGGAGGGAGTATATCTATAGG 58.883 42.308 0.00 0.00 0.00 2.57
2542 2863 6.905067 ACGGAGGGAGTATATCTATAGGAA 57.095 41.667 0.00 0.00 0.00 3.36
2543 2864 7.281366 ACGGAGGGAGTATATCTATAGGAAA 57.719 40.000 0.00 0.00 0.00 3.13
2544 2865 7.348033 ACGGAGGGAGTATATCTATAGGAAAG 58.652 42.308 0.00 0.00 0.00 2.62
2554 2875 9.828852 GTATATCTATAGGAAAGTTCACGTCTG 57.171 37.037 0.00 0.00 0.00 3.51
2556 2877 7.876936 ATCTATAGGAAAGTTCACGTCTGTA 57.123 36.000 0.00 0.00 0.00 2.74
2557 2878 7.317842 TCTATAGGAAAGTTCACGTCTGTAG 57.682 40.000 0.00 0.00 0.00 2.74
2558 2879 3.027974 AGGAAAGTTCACGTCTGTAGC 57.972 47.619 0.00 0.00 0.00 3.58
2559 2880 2.364324 AGGAAAGTTCACGTCTGTAGCA 59.636 45.455 0.00 0.00 0.00 3.49
2560 2881 2.475487 GGAAAGTTCACGTCTGTAGCAC 59.525 50.000 0.00 0.00 0.00 4.40
2561 2882 1.767289 AAGTTCACGTCTGTAGCACG 58.233 50.000 0.00 0.00 43.13 5.34
2568 2889 2.826979 CGTCTGTAGCACGTACTGAT 57.173 50.000 0.00 0.00 40.53 2.90
2569 2890 3.132629 CGTCTGTAGCACGTACTGATT 57.867 47.619 0.00 0.00 40.53 2.57
2570 2891 3.499048 CGTCTGTAGCACGTACTGATTT 58.501 45.455 0.00 0.00 40.53 2.17
2571 2892 3.542704 CGTCTGTAGCACGTACTGATTTC 59.457 47.826 0.00 0.00 40.53 2.17
2572 2893 4.672024 CGTCTGTAGCACGTACTGATTTCT 60.672 45.833 0.00 0.00 40.53 2.52
2573 2894 4.559251 GTCTGTAGCACGTACTGATTTCTG 59.441 45.833 0.00 0.00 40.53 3.02
2574 2895 4.217767 TCTGTAGCACGTACTGATTTCTGT 59.782 41.667 0.00 0.00 35.33 3.41
2575 2896 4.234574 TGTAGCACGTACTGATTTCTGTG 58.765 43.478 0.00 0.00 32.19 3.66
2576 2897 2.688507 AGCACGTACTGATTTCTGTGG 58.311 47.619 0.00 0.00 0.00 4.17
2577 2898 1.128692 GCACGTACTGATTTCTGTGGC 59.871 52.381 0.00 0.00 0.00 5.01
2619 2940 2.317371 AGGTGACTGTCCTGATGACT 57.683 50.000 5.17 0.00 44.75 3.41
2620 2941 3.458044 AGGTGACTGTCCTGATGACTA 57.542 47.619 5.17 0.00 44.75 2.59
2621 2942 3.093057 AGGTGACTGTCCTGATGACTAC 58.907 50.000 5.17 0.00 44.75 2.73
2622 2943 3.093057 GGTGACTGTCCTGATGACTACT 58.907 50.000 5.17 0.00 44.75 2.57
2623 2944 3.129638 GGTGACTGTCCTGATGACTACTC 59.870 52.174 5.17 0.00 44.75 2.59
2624 2945 3.129638 GTGACTGTCCTGATGACTACTCC 59.870 52.174 5.17 0.00 44.75 3.85
2625 2946 2.691011 GACTGTCCTGATGACTACTCCC 59.309 54.545 0.00 0.00 44.75 4.30
2626 2947 2.313342 ACTGTCCTGATGACTACTCCCT 59.687 50.000 0.00 0.00 44.75 4.20
2627 2948 2.955660 CTGTCCTGATGACTACTCCCTC 59.044 54.545 0.00 0.00 44.75 4.30
2628 2949 2.312390 GTCCTGATGACTACTCCCTCC 58.688 57.143 0.00 0.00 41.03 4.30
2629 2950 1.133761 TCCTGATGACTACTCCCTCCG 60.134 57.143 0.00 0.00 0.00 4.63
2630 2951 0.671251 CTGATGACTACTCCCTCCGC 59.329 60.000 0.00 0.00 0.00 5.54
2631 2952 0.259065 TGATGACTACTCCCTCCGCT 59.741 55.000 0.00 0.00 0.00 5.52
2632 2953 0.955905 GATGACTACTCCCTCCGCTC 59.044 60.000 0.00 0.00 0.00 5.03
2633 2954 0.820074 ATGACTACTCCCTCCGCTCG 60.820 60.000 0.00 0.00 0.00 5.03
2634 2955 2.124236 ACTACTCCCTCCGCTCGG 60.124 66.667 1.14 1.14 0.00 4.63
2635 2956 2.192443 CTACTCCCTCCGCTCGGA 59.808 66.667 10.84 10.84 42.90 4.55
2636 2957 1.453379 CTACTCCCTCCGCTCGGAA 60.453 63.158 12.42 0.00 44.66 4.30
2637 2958 0.824182 CTACTCCCTCCGCTCGGAAT 60.824 60.000 12.42 0.00 44.66 3.01
2638 2959 0.396695 TACTCCCTCCGCTCGGAATT 60.397 55.000 12.42 0.00 44.66 2.17
2639 2960 0.396695 ACTCCCTCCGCTCGGAATTA 60.397 55.000 12.42 0.00 44.66 1.40
2640 2961 0.032267 CTCCCTCCGCTCGGAATTAC 59.968 60.000 12.42 0.00 44.66 1.89
2641 2962 0.396695 TCCCTCCGCTCGGAATTACT 60.397 55.000 12.42 0.00 44.66 2.24
2642 2963 0.464452 CCCTCCGCTCGGAATTACTT 59.536 55.000 12.42 0.00 44.66 2.24
2643 2964 1.571919 CCTCCGCTCGGAATTACTTG 58.428 55.000 12.42 0.00 44.66 3.16
2644 2965 1.134788 CCTCCGCTCGGAATTACTTGT 60.135 52.381 12.42 0.00 44.66 3.16
2645 2966 2.194271 CTCCGCTCGGAATTACTTGTC 58.806 52.381 12.42 0.00 44.66 3.18
2646 2967 1.822990 TCCGCTCGGAATTACTTGTCT 59.177 47.619 8.76 0.00 42.05 3.41
2647 2968 2.159282 TCCGCTCGGAATTACTTGTCTC 60.159 50.000 8.76 0.00 42.05 3.36
2648 2969 1.846782 CGCTCGGAATTACTTGTCTCG 59.153 52.381 0.00 0.00 0.00 4.04
2649 2970 2.194271 GCTCGGAATTACTTGTCTCGG 58.806 52.381 0.00 0.00 0.00 4.63
2650 2971 2.159282 GCTCGGAATTACTTGTCTCGGA 60.159 50.000 0.00 0.00 0.00 4.55
2651 2972 3.675228 GCTCGGAATTACTTGTCTCGGAA 60.675 47.826 0.00 0.00 0.00 4.30
2652 2973 4.491676 CTCGGAATTACTTGTCTCGGAAA 58.508 43.478 0.00 0.00 0.00 3.13
2653 2974 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
2654 2975 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
2655 2976 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
2656 2977 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
2657 2978 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
2658 2979 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
2659 2980 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
2660 2981 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
2661 2982 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
2662 2983 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
2663 2984 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
2664 2985 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
2665 2986 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
2666 2987 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
2667 2988 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
2668 2989 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
2669 2990 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
2670 2991 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
2671 2992 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
2672 2993 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
2673 2994 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
2697 3018 9.698309 AAATACGTCTAGATACATCCATTTCTG 57.302 33.333 0.00 0.00 0.00 3.02
2698 3019 5.533482 ACGTCTAGATACATCCATTTCTGC 58.467 41.667 0.00 0.00 0.00 4.26
2699 3020 4.618912 CGTCTAGATACATCCATTTCTGCG 59.381 45.833 0.00 0.00 0.00 5.18
2700 3021 5.562890 CGTCTAGATACATCCATTTCTGCGA 60.563 44.000 0.00 0.00 0.00 5.10
2701 3022 5.631512 GTCTAGATACATCCATTTCTGCGAC 59.368 44.000 0.00 0.00 0.00 5.19
2702 3023 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
2703 3024 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
2704 3025 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
2705 3026 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
2706 3027 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
2707 3028 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
2708 3029 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
2709 3030 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
2710 3031 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
2711 3032 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
2712 3033 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
2713 3034 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
2714 3035 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
2715 3036 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
2716 3037 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
2717 3038 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
2718 3039 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
2719 3040 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
2720 3041 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
2721 3042 2.301009 ACAAGTAATTCCGAACGGAGGT 59.699 45.455 15.34 10.24 46.06 3.85
2722 3043 3.244318 ACAAGTAATTCCGAACGGAGGTT 60.244 43.478 15.34 15.63 46.06 3.50
2790 3111 1.538512 CCAAACAGTGGTCATGCTCAG 59.461 52.381 0.00 0.00 43.20 3.35
2792 3113 2.175878 AACAGTGGTCATGCTCAGAC 57.824 50.000 0.00 0.00 35.29 3.51
2796 3117 1.627329 AGTGGTCATGCTCAGACACAT 59.373 47.619 0.00 0.00 37.74 3.21
2797 3118 1.736126 GTGGTCATGCTCAGACACATG 59.264 52.381 0.00 0.00 44.05 3.21
2798 3119 1.339342 TGGTCATGCTCAGACACATGG 60.339 52.381 0.00 0.00 43.12 3.66
2799 3120 1.339438 GGTCATGCTCAGACACATGGT 60.339 52.381 0.00 0.00 43.12 3.55
2831 3162 9.499479 AATAAGAATAGATGGTGCTGAAGTATG 57.501 33.333 0.00 0.00 0.00 2.39
2857 3188 2.820178 TGAGGCAGTTGGAGATGTCTA 58.180 47.619 0.00 0.00 29.80 2.59
2870 3201 4.502259 GGAGATGTCTAGGCTTGTATGTGG 60.502 50.000 0.00 0.00 0.00 4.17
2874 3205 3.447586 TGTCTAGGCTTGTATGTGGTCTC 59.552 47.826 0.00 0.00 0.00 3.36
2876 3207 3.701542 TCTAGGCTTGTATGTGGTCTCAG 59.298 47.826 0.00 0.00 0.00 3.35
2879 3210 2.028112 GGCTTGTATGTGGTCTCAGACA 60.028 50.000 7.24 0.00 37.69 3.41
2880 3211 2.996621 GCTTGTATGTGGTCTCAGACAC 59.003 50.000 7.24 3.90 38.88 3.67
2881 3212 3.306364 GCTTGTATGTGGTCTCAGACACT 60.306 47.826 7.24 0.00 38.88 3.55
2882 3213 4.800914 GCTTGTATGTGGTCTCAGACACTT 60.801 45.833 7.24 4.41 38.88 3.16
2883 3214 4.257267 TGTATGTGGTCTCAGACACTTG 57.743 45.455 7.24 0.00 35.15 3.16
2884 3215 2.175878 ATGTGGTCTCAGACACTTGC 57.824 50.000 7.24 0.00 33.68 4.01
2885 3216 1.123077 TGTGGTCTCAGACACTTGCT 58.877 50.000 7.24 0.00 33.68 3.91
2886 3217 1.202568 TGTGGTCTCAGACACTTGCTG 60.203 52.381 7.24 0.00 33.68 4.41
2888 3219 1.762370 TGGTCTCAGACACTTGCTGAA 59.238 47.619 7.24 0.00 41.45 3.02
2892 3223 4.501571 GGTCTCAGACACTTGCTGAAGTAA 60.502 45.833 7.24 0.00 40.68 2.24
2923 3254 0.098200 CAGGTTGCACATCAGCATCG 59.902 55.000 0.00 0.00 45.19 3.84
2942 3274 4.123497 TCGTTCATCTACCATCCAACTG 57.877 45.455 0.00 0.00 0.00 3.16
2945 3277 4.441495 CGTTCATCTACCATCCAACTGCTA 60.441 45.833 0.00 0.00 0.00 3.49
2960 3292 2.238898 ACTGCTAACCCACCCAGTAATC 59.761 50.000 0.00 0.00 36.82 1.75
2997 3329 9.016623 CGTAATTCAGTAGAAATATTCACGACA 57.983 33.333 0.00 0.00 37.29 4.35
3009 3341 1.155889 TCACGACAATCATGGTGCAC 58.844 50.000 8.80 8.80 0.00 4.57
3060 3392 0.321210 CACCACAACGGGCATGTCTA 60.321 55.000 0.00 0.00 40.22 2.59
3098 3430 9.612620 CAAATACACTTTTCCTGATTTACAGTC 57.387 33.333 0.00 0.00 44.40 3.51
3101 3433 5.239525 ACACTTTTCCTGATTTACAGTCTGC 59.760 40.000 0.00 0.00 44.40 4.26
3108 3440 7.004555 TCCTGATTTACAGTCTGCTTTCTAA 57.995 36.000 0.00 0.00 44.40 2.10
3115 3447 4.883083 ACAGTCTGCTTTCTAATTCGTCA 58.117 39.130 0.00 0.00 0.00 4.35
3117 3449 5.758296 ACAGTCTGCTTTCTAATTCGTCAAA 59.242 36.000 0.00 0.00 0.00 2.69
3121 3453 6.575201 GTCTGCTTTCTAATTCGTCAAAAGTG 59.425 38.462 0.00 0.00 31.24 3.16
3134 3466 4.211374 CGTCAAAAGTGAACCAAGGTAGAG 59.789 45.833 0.00 0.00 34.87 2.43
3166 3498 7.486407 AATGGGATTCTTTAGTTTCTGCAAT 57.514 32.000 0.00 0.00 0.00 3.56
3168 3500 6.690530 TGGGATTCTTTAGTTTCTGCAATTG 58.309 36.000 0.00 0.00 0.00 2.32
3175 3507 6.864685 TCTTTAGTTTCTGCAATTGAATGCTG 59.135 34.615 10.34 0.00 46.54 4.41
3193 3525 6.964807 ATGCTGAATAAATTCCAGCATGTA 57.035 33.333 25.14 11.18 46.78 2.29
3197 3529 7.501892 TGCTGAATAAATTCCAGCATGTACATA 59.498 33.333 8.32 0.00 41.44 2.29
3198 3530 7.805071 GCTGAATAAATTCCAGCATGTACATAC 59.195 37.037 8.32 2.44 39.02 2.39
3199 3531 7.860613 TGAATAAATTCCAGCATGTACATACG 58.139 34.615 8.32 0.00 35.97 3.06
3200 3532 7.713073 TGAATAAATTCCAGCATGTACATACGA 59.287 33.333 8.32 0.00 35.97 3.43
3201 3533 5.734855 AAATTCCAGCATGTACATACGAC 57.265 39.130 8.32 0.00 0.00 4.34
3202 3534 3.878160 TTCCAGCATGTACATACGACA 57.122 42.857 8.32 0.00 0.00 4.35
3203 3535 3.878160 TCCAGCATGTACATACGACAA 57.122 42.857 8.32 0.00 0.00 3.18
3204 3536 4.400529 TCCAGCATGTACATACGACAAT 57.599 40.909 8.32 0.00 0.00 2.71
3205 3537 5.523438 TCCAGCATGTACATACGACAATA 57.477 39.130 8.32 0.00 0.00 1.90
3206 3538 5.286438 TCCAGCATGTACATACGACAATAC 58.714 41.667 8.32 0.00 0.00 1.89
3207 3539 5.068591 TCCAGCATGTACATACGACAATACT 59.931 40.000 8.32 0.00 0.00 2.12
3208 3540 5.402568 CCAGCATGTACATACGACAATACTC 59.597 44.000 8.32 0.00 0.00 2.59
3209 3541 5.402568 CAGCATGTACATACGACAATACTCC 59.597 44.000 8.32 0.00 0.00 3.85
3210 3542 4.684703 GCATGTACATACGACAATACTCCC 59.315 45.833 8.32 0.00 0.00 4.30
3211 3543 5.509163 GCATGTACATACGACAATACTCCCT 60.509 44.000 8.32 0.00 0.00 4.20
3212 3544 5.762825 TGTACATACGACAATACTCCCTC 57.237 43.478 0.00 0.00 0.00 4.30
3213 3545 4.581824 TGTACATACGACAATACTCCCTCC 59.418 45.833 0.00 0.00 0.00 4.30
3214 3546 2.621998 ACATACGACAATACTCCCTCCG 59.378 50.000 0.00 0.00 0.00 4.63
3215 3547 2.425143 TACGACAATACTCCCTCCGT 57.575 50.000 0.00 0.00 0.00 4.69
3216 3548 1.553706 ACGACAATACTCCCTCCGTT 58.446 50.000 0.00 0.00 0.00 4.44
3217 3549 1.475682 ACGACAATACTCCCTCCGTTC 59.524 52.381 0.00 0.00 0.00 3.95
3218 3550 1.202382 CGACAATACTCCCTCCGTTCC 60.202 57.143 0.00 0.00 0.00 3.62
3219 3551 0.822164 ACAATACTCCCTCCGTTCCG 59.178 55.000 0.00 0.00 0.00 4.30
3220 3552 0.822164 CAATACTCCCTCCGTTCCGT 59.178 55.000 0.00 0.00 0.00 4.69
3221 3553 1.206371 CAATACTCCCTCCGTTCCGTT 59.794 52.381 0.00 0.00 0.00 4.44
3222 3554 1.565067 ATACTCCCTCCGTTCCGTTT 58.435 50.000 0.00 0.00 0.00 3.60
3223 3555 0.890683 TACTCCCTCCGTTCCGTTTC 59.109 55.000 0.00 0.00 0.00 2.78
3224 3556 0.830866 ACTCCCTCCGTTCCGTTTCT 60.831 55.000 0.00 0.00 0.00 2.52
3225 3557 1.180029 CTCCCTCCGTTCCGTTTCTA 58.820 55.000 0.00 0.00 0.00 2.10
3226 3558 1.547372 CTCCCTCCGTTCCGTTTCTAA 59.453 52.381 0.00 0.00 0.00 2.10
3227 3559 1.969923 TCCCTCCGTTCCGTTTCTAAA 59.030 47.619 0.00 0.00 0.00 1.85
3228 3560 2.568509 TCCCTCCGTTCCGTTTCTAAAT 59.431 45.455 0.00 0.00 0.00 1.40
3229 3561 3.768757 TCCCTCCGTTCCGTTTCTAAATA 59.231 43.478 0.00 0.00 0.00 1.40
3230 3562 4.406649 TCCCTCCGTTCCGTTTCTAAATAT 59.593 41.667 0.00 0.00 0.00 1.28
3231 3563 5.598005 TCCCTCCGTTCCGTTTCTAAATATA 59.402 40.000 0.00 0.00 0.00 0.86
3232 3564 6.098124 TCCCTCCGTTCCGTTTCTAAATATAA 59.902 38.462 0.00 0.00 0.00 0.98
3233 3565 6.423001 CCCTCCGTTCCGTTTCTAAATATAAG 59.577 42.308 0.00 0.00 0.00 1.73
3234 3566 6.982724 CCTCCGTTCCGTTTCTAAATATAAGT 59.017 38.462 0.00 0.00 0.00 2.24
3235 3567 7.168804 CCTCCGTTCCGTTTCTAAATATAAGTC 59.831 40.741 0.00 0.00 0.00 3.01
3236 3568 7.775120 TCCGTTCCGTTTCTAAATATAAGTCT 58.225 34.615 0.00 0.00 0.00 3.24
3237 3569 8.253113 TCCGTTCCGTTTCTAAATATAAGTCTT 58.747 33.333 0.00 0.00 0.00 3.01
3238 3570 8.876790 CCGTTCCGTTTCTAAATATAAGTCTTT 58.123 33.333 0.00 0.00 0.00 2.52
3239 3571 9.685005 CGTTCCGTTTCTAAATATAAGTCTTTG 57.315 33.333 0.00 0.00 0.00 2.77
3258 3590 9.646427 AGTCTTTGTAGAGATTTCACTATGAAC 57.354 33.333 0.00 0.00 35.89 3.18
3259 3591 9.646427 GTCTTTGTAGAGATTTCACTATGAACT 57.354 33.333 0.00 0.00 35.89 3.01
3265 3597 8.973378 GTAGAGATTTCACTATGAACTACATGC 58.027 37.037 10.10 0.00 35.89 4.06
3266 3598 6.699204 AGAGATTTCACTATGAACTACATGCG 59.301 38.462 0.00 0.00 35.89 4.73
3267 3599 5.755375 AGATTTCACTATGAACTACATGCGG 59.245 40.000 0.00 0.00 35.89 5.69
3268 3600 4.729227 TTCACTATGAACTACATGCGGA 57.271 40.909 0.00 0.00 39.77 5.54
3269 3601 4.937201 TCACTATGAACTACATGCGGAT 57.063 40.909 0.00 0.00 39.77 4.18
3270 3602 4.620982 TCACTATGAACTACATGCGGATG 58.379 43.478 16.07 16.07 39.77 3.51
3271 3603 4.099419 TCACTATGAACTACATGCGGATGT 59.901 41.667 26.09 26.09 45.24 3.06
3272 3604 5.300792 TCACTATGAACTACATGCGGATGTA 59.699 40.000 25.54 25.54 41.27 2.29
3273 3605 6.015434 TCACTATGAACTACATGCGGATGTAT 60.015 38.462 27.01 15.48 42.87 2.29
3274 3606 7.175990 TCACTATGAACTACATGCGGATGTATA 59.824 37.037 27.01 17.01 42.87 1.47
3275 3607 7.976175 CACTATGAACTACATGCGGATGTATAT 59.024 37.037 27.01 19.20 42.87 0.86
3276 3608 9.185680 ACTATGAACTACATGCGGATGTATATA 57.814 33.333 27.01 19.97 42.87 0.86
3277 3609 9.670719 CTATGAACTACATGCGGATGTATATAG 57.329 37.037 27.01 23.56 42.87 1.31
3278 3610 7.696992 TGAACTACATGCGGATGTATATAGA 57.303 36.000 27.01 8.81 42.87 1.98
3279 3611 8.293699 TGAACTACATGCGGATGTATATAGAT 57.706 34.615 27.01 13.94 42.87 1.98
3280 3612 8.190784 TGAACTACATGCGGATGTATATAGATG 58.809 37.037 27.01 16.83 42.87 2.90
3281 3613 7.646548 ACTACATGCGGATGTATATAGATGT 57.353 36.000 27.01 17.41 42.87 3.06
3282 3614 8.747538 ACTACATGCGGATGTATATAGATGTA 57.252 34.615 27.01 6.00 42.87 2.29
3283 3615 9.355916 ACTACATGCGGATGTATATAGATGTAT 57.644 33.333 27.01 1.92 42.87 2.29
3312 3644 8.992835 AAGTTTAGATTCATTCATTTTGCTCC 57.007 30.769 0.00 0.00 0.00 4.70
3313 3645 7.253422 AGTTTAGATTCATTCATTTTGCTCCG 58.747 34.615 0.00 0.00 0.00 4.63
3314 3646 6.757897 TTAGATTCATTCATTTTGCTCCGT 57.242 33.333 0.00 0.00 0.00 4.69
3315 3647 7.857734 TTAGATTCATTCATTTTGCTCCGTA 57.142 32.000 0.00 0.00 0.00 4.02
3316 3648 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
3317 3649 9.554395 TTAGATTCATTCATTTTGCTCCGTATA 57.446 29.630 0.00 0.00 0.00 1.47
3318 3650 8.627208 AGATTCATTCATTTTGCTCCGTATAT 57.373 30.769 0.00 0.00 0.00 0.86
3319 3651 9.725019 AGATTCATTCATTTTGCTCCGTATATA 57.275 29.630 0.00 0.00 0.00 0.86
3320 3652 9.979270 GATTCATTCATTTTGCTCCGTATATAG 57.021 33.333 0.00 0.00 0.00 1.31
3321 3653 8.902540 TTCATTCATTTTGCTCCGTATATAGT 57.097 30.769 0.00 0.00 0.00 2.12
3322 3654 8.534333 TCATTCATTTTGCTCCGTATATAGTC 57.466 34.615 0.00 0.00 0.00 2.59
3323 3655 7.602644 TCATTCATTTTGCTCCGTATATAGTCC 59.397 37.037 0.00 0.00 0.00 3.85
3324 3656 6.413783 TCATTTTGCTCCGTATATAGTCCA 57.586 37.500 0.00 0.00 0.00 4.02
3325 3657 6.220930 TCATTTTGCTCCGTATATAGTCCAC 58.779 40.000 0.00 0.00 0.00 4.02
3326 3658 5.864418 TTTTGCTCCGTATATAGTCCACT 57.136 39.130 0.00 0.00 0.00 4.00
3327 3659 5.864418 TTTGCTCCGTATATAGTCCACTT 57.136 39.130 0.00 0.00 0.00 3.16
3328 3660 6.964807 TTTGCTCCGTATATAGTCCACTTA 57.035 37.500 0.00 0.00 0.00 2.24
3329 3661 6.570672 TTGCTCCGTATATAGTCCACTTAG 57.429 41.667 0.00 0.00 0.00 2.18
3330 3662 5.628130 TGCTCCGTATATAGTCCACTTAGT 58.372 41.667 0.00 0.00 0.00 2.24
3331 3663 5.472478 TGCTCCGTATATAGTCCACTTAGTG 59.528 44.000 5.22 5.22 0.00 2.74
3332 3664 5.704515 GCTCCGTATATAGTCCACTTAGTGA 59.295 44.000 14.66 0.00 35.23 3.41
3333 3665 6.206243 GCTCCGTATATAGTCCACTTAGTGAA 59.794 42.308 14.66 0.00 35.23 3.18
3334 3666 7.255381 GCTCCGTATATAGTCCACTTAGTGAAA 60.255 40.741 14.66 0.00 35.23 2.69
3335 3667 8.701908 TCCGTATATAGTCCACTTAGTGAAAT 57.298 34.615 14.66 0.00 35.23 2.17
3336 3668 8.790718 TCCGTATATAGTCCACTTAGTGAAATC 58.209 37.037 14.66 1.46 35.23 2.17
3337 3669 8.794553 CCGTATATAGTCCACTTAGTGAAATCT 58.205 37.037 14.66 8.48 35.23 2.40
3338 3670 9.828852 CGTATATAGTCCACTTAGTGAAATCTC 57.171 37.037 14.66 0.00 35.23 2.75
3342 3674 8.824756 ATAGTCCACTTAGTGAAATCTCTACA 57.175 34.615 14.66 0.00 35.23 2.74
3343 3675 7.540474 AGTCCACTTAGTGAAATCTCTACAA 57.460 36.000 14.66 0.00 35.23 2.41
3344 3676 7.963532 AGTCCACTTAGTGAAATCTCTACAAA 58.036 34.615 14.66 0.00 35.23 2.83
3345 3677 8.091449 AGTCCACTTAGTGAAATCTCTACAAAG 58.909 37.037 14.66 0.00 35.23 2.77
3346 3678 8.088981 GTCCACTTAGTGAAATCTCTACAAAGA 58.911 37.037 14.66 0.00 35.23 2.52
3347 3679 8.816894 TCCACTTAGTGAAATCTCTACAAAGAT 58.183 33.333 14.66 0.00 35.05 2.40
3348 3680 9.442047 CCACTTAGTGAAATCTCTACAAAGATT 57.558 33.333 14.66 0.00 45.67 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 9.676195 CATTCAAACAAAGAACACACATATACA 57.324 29.630 0.00 0.00 0.00 2.29
11 12 9.128107 CCATTCAAACAAAGAACACACATATAC 57.872 33.333 0.00 0.00 0.00 1.47
12 13 9.072375 TCCATTCAAACAAAGAACACACATATA 57.928 29.630 0.00 0.00 0.00 0.86
13 14 7.950512 TCCATTCAAACAAAGAACACACATAT 58.049 30.769 0.00 0.00 0.00 1.78
14 15 7.340122 TCCATTCAAACAAAGAACACACATA 57.660 32.000 0.00 0.00 0.00 2.29
15 16 6.219417 TCCATTCAAACAAAGAACACACAT 57.781 33.333 0.00 0.00 0.00 3.21
16 17 5.651387 TCCATTCAAACAAAGAACACACA 57.349 34.783 0.00 0.00 0.00 3.72
17 18 6.018832 CCAATCCATTCAAACAAAGAACACAC 60.019 38.462 0.00 0.00 0.00 3.82
54 55 5.530543 GGGCAACAATTCATTTTCTTTCCAA 59.469 36.000 0.00 0.00 39.74 3.53
55 56 5.062528 GGGCAACAATTCATTTTCTTTCCA 58.937 37.500 0.00 0.00 39.74 3.53
57 58 4.749598 ACGGGCAACAATTCATTTTCTTTC 59.250 37.500 0.00 0.00 39.74 2.62
58 59 4.511082 CACGGGCAACAATTCATTTTCTTT 59.489 37.500 0.00 0.00 39.74 2.52
59 60 4.057432 CACGGGCAACAATTCATTTTCTT 58.943 39.130 0.00 0.00 39.74 2.52
60 61 3.069443 ACACGGGCAACAATTCATTTTCT 59.931 39.130 0.00 0.00 39.74 2.52
61 62 3.184178 CACACGGGCAACAATTCATTTTC 59.816 43.478 0.00 0.00 39.74 2.29
62 63 3.129871 CACACGGGCAACAATTCATTTT 58.870 40.909 0.00 0.00 39.74 1.82
66 67 1.361993 GCACACGGGCAACAATTCA 59.638 52.632 0.00 0.00 39.74 2.57
70 71 0.320508 TATACGCACACGGGCAACAA 60.321 50.000 0.00 0.00 46.04 2.83
84 85 8.589335 AGTAACAGAAATTGGCACTATATACG 57.411 34.615 0.00 0.00 0.00 3.06
90 91 6.183360 TGCAAAAGTAACAGAAATTGGCACTA 60.183 34.615 0.00 0.00 0.00 2.74
138 139 1.500396 GACGGGATTGTTTGCGTCC 59.500 57.895 0.00 0.00 0.00 4.79
153 154 0.591236 CACTTGTTTGTTGGGCGACG 60.591 55.000 0.00 0.00 0.00 5.12
205 206 0.608640 GACGTCAGGACAGGGTCAAT 59.391 55.000 11.55 0.00 33.68 2.57
238 239 3.879295 CTGCACATCCAAGGATAACGATT 59.121 43.478 0.40 0.00 32.93 3.34
239 240 3.118261 ACTGCACATCCAAGGATAACGAT 60.118 43.478 0.40 0.00 32.93 3.73
240 241 2.236146 ACTGCACATCCAAGGATAACGA 59.764 45.455 0.40 0.00 32.93 3.85
241 242 2.632377 ACTGCACATCCAAGGATAACG 58.368 47.619 0.40 0.00 32.93 3.18
242 243 4.737054 CAAACTGCACATCCAAGGATAAC 58.263 43.478 0.40 0.00 32.93 1.89
243 244 3.193267 GCAAACTGCACATCCAAGGATAA 59.807 43.478 0.40 0.00 44.26 1.75
263 264 0.814457 ACTTTTGAAGTTGCGTGGCA 59.186 45.000 0.00 0.00 39.04 4.92
290 291 2.780361 ATCGTTTCGTTGCACGTATG 57.220 45.000 8.22 4.80 43.14 2.39
341 342 4.395959 TGAACGAAAATAGACGGCCTAT 57.604 40.909 0.00 0.00 39.70 2.57
347 348 5.472822 CGAGAACATGAACGAAAATAGACG 58.527 41.667 0.00 0.00 0.00 4.18
391 396 7.067496 ACAAACTCAGATTCTCTAGTGGAAA 57.933 36.000 5.37 0.00 0.00 3.13
394 399 6.090088 CGAAACAAACTCAGATTCTCTAGTGG 59.910 42.308 0.16 0.01 0.00 4.00
395 400 6.642950 ACGAAACAAACTCAGATTCTCTAGTG 59.357 38.462 0.00 0.00 0.00 2.74
438 451 1.463674 CAGGGTATGCTGGTTTGACC 58.536 55.000 0.00 0.00 39.22 4.02
457 470 1.398692 TGAATAAAATCGGGGCCAGC 58.601 50.000 4.39 0.00 0.00 4.85
459 472 1.686052 GCATGAATAAAATCGGGGCCA 59.314 47.619 4.39 0.00 0.00 5.36
461 474 2.863704 GCAGCATGAATAAAATCGGGGC 60.864 50.000 0.00 0.00 39.69 5.80
462 475 2.605338 CGCAGCATGAATAAAATCGGGG 60.605 50.000 0.00 0.00 39.69 5.73
463 476 2.653890 CGCAGCATGAATAAAATCGGG 58.346 47.619 0.00 0.00 39.69 5.14
496 509 8.626526 GGAGTAGTATTTGACCTTTGACAAAAA 58.373 33.333 1.62 0.00 39.06 1.94
497 510 7.229907 GGGAGTAGTATTTGACCTTTGACAAAA 59.770 37.037 1.62 0.00 39.06 2.44
498 511 6.713450 GGGAGTAGTATTTGACCTTTGACAAA 59.287 38.462 0.00 0.00 39.70 2.83
499 512 6.043938 AGGGAGTAGTATTTGACCTTTGACAA 59.956 38.462 0.00 0.00 0.00 3.18
500 513 5.546499 AGGGAGTAGTATTTGACCTTTGACA 59.454 40.000 0.00 0.00 0.00 3.58
501 514 6.051179 AGGGAGTAGTATTTGACCTTTGAC 57.949 41.667 0.00 0.00 0.00 3.18
502 515 6.500751 AGAAGGGAGTAGTATTTGACCTTTGA 59.499 38.462 0.00 0.00 37.01 2.69
503 516 6.712276 AGAAGGGAGTAGTATTTGACCTTTG 58.288 40.000 0.00 0.00 37.01 2.77
504 517 6.954352 AGAAGGGAGTAGTATTTGACCTTT 57.046 37.500 0.00 0.00 37.01 3.11
505 518 6.070136 GGAAGAAGGGAGTAGTATTTGACCTT 60.070 42.308 0.00 0.00 39.38 3.50
506 519 5.425862 GGAAGAAGGGAGTAGTATTTGACCT 59.574 44.000 0.00 0.00 0.00 3.85
507 520 5.672503 GGAAGAAGGGAGTAGTATTTGACC 58.327 45.833 0.00 0.00 0.00 4.02
508 521 5.126707 TCGGAAGAAGGGAGTAGTATTTGAC 59.873 44.000 0.00 0.00 37.03 3.18
509 522 5.266788 TCGGAAGAAGGGAGTAGTATTTGA 58.733 41.667 0.00 0.00 37.03 2.69
510 523 5.593679 TCGGAAGAAGGGAGTAGTATTTG 57.406 43.478 0.00 0.00 37.03 2.32
612 625 9.595823 AGAAGTACGTACTTACATGCAAAATAT 57.404 29.630 34.51 12.91 45.84 1.28
619 632 7.113704 ACAAAAGAAGTACGTACTTACATGC 57.886 36.000 34.51 23.41 45.84 4.06
620 633 8.516811 AGACAAAAGAAGTACGTACTTACATG 57.483 34.615 34.51 29.16 45.84 3.21
621 634 8.355169 TGAGACAAAAGAAGTACGTACTTACAT 58.645 33.333 34.51 22.65 45.84 2.29
622 635 7.706159 TGAGACAAAAGAAGTACGTACTTACA 58.294 34.615 34.51 20.49 45.84 2.41
623 636 8.739649 ATGAGACAAAAGAAGTACGTACTTAC 57.260 34.615 34.51 26.67 45.84 2.34
668 681 8.227791 AGCGTTTTTGACACTACATTACTAATG 58.772 33.333 7.17 7.17 44.48 1.90
669 682 8.319143 AGCGTTTTTGACACTACATTACTAAT 57.681 30.769 0.00 0.00 0.00 1.73
670 683 7.654520 AGAGCGTTTTTGACACTACATTACTAA 59.345 33.333 0.00 0.00 0.00 2.24
673 686 6.224420 AGAGCGTTTTTGACACTACATTAC 57.776 37.500 0.00 0.00 0.00 1.89
689 702 7.458409 TTCCGTCCTATAATATAAGAGCGTT 57.542 36.000 0.00 0.00 0.00 4.84
764 777 9.747898 TCCACACTTCCAATAACTTAAATGTAT 57.252 29.630 0.00 0.00 0.00 2.29
774 787 5.562890 GCAAGAGTTCCACACTTCCAATAAC 60.563 44.000 0.00 0.00 35.01 1.89
792 805 2.257691 ATATGCAGCAGGAGCAAGAG 57.742 50.000 0.00 0.00 46.27 2.85
804 817 4.122776 ACGCTTCCTGTTTCTATATGCAG 58.877 43.478 0.00 0.00 0.00 4.41
810 823 2.567615 AGTGGACGCTTCCTGTTTCTAT 59.432 45.455 11.01 0.00 43.31 1.98
827 1036 5.778241 TGGGTGGTGTATATATACTCAGTGG 59.222 44.000 20.80 0.00 34.41 4.00
859 1068 1.327292 CGATTGTTGTTTGGCGCGAC 61.327 55.000 12.10 8.22 0.00 5.19
881 1090 3.659380 TGGTGATGCCATCCGGAT 58.341 55.556 12.38 12.38 43.61 4.18
968 1177 0.891373 GACTGCTGCAGAGTACTGGA 59.109 55.000 34.28 0.00 43.62 3.86
969 1178 0.457509 CGACTGCTGCAGAGTACTGG 60.458 60.000 34.28 10.48 43.62 4.00
970 1179 0.242286 ACGACTGCTGCAGAGTACTG 59.758 55.000 34.28 18.04 45.91 2.74
995 1204 2.593725 CGGAGGATGCCATGGCTG 60.594 66.667 35.53 13.63 42.51 4.85
996 1205 4.575973 GCGGAGGATGCCATGGCT 62.576 66.667 35.53 21.86 42.51 4.75
1725 1989 4.162690 AGGCCGCGGAAGATGGAC 62.163 66.667 33.48 8.16 36.52 4.02
1839 2121 1.406219 CGATCACCGAGTTGAGCACG 61.406 60.000 0.00 0.00 41.76 5.34
2351 2633 2.745281 TCAGTAATTTACGGCAACCAGC 59.255 45.455 2.26 0.00 44.65 4.85
2385 2667 0.032952 TATACCGGGATGCAACGCTC 59.967 55.000 10.31 0.00 0.00 5.03
2386 2668 0.249741 GTATACCGGGATGCAACGCT 60.250 55.000 10.31 0.00 0.00 5.07
2405 2687 7.042335 GGGAGTAGATACAAATGGATAATCCG 58.958 42.308 0.00 0.00 40.17 4.18
2436 2757 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
2438 2759 2.278094 CGTACCTGCGACAAGTAATTCG 59.722 50.000 0.00 0.00 38.31 3.34
2439 2760 2.601763 CCGTACCTGCGACAAGTAATTC 59.398 50.000 0.00 0.00 0.00 2.17
2442 2763 1.246649 TCCGTACCTGCGACAAGTAA 58.753 50.000 0.00 0.00 0.00 2.24
2451 2772 4.459685 ACATCTAGATACATCCGTACCTGC 59.540 45.833 4.54 0.00 0.00 4.85
2452 2773 7.867305 ATACATCTAGATACATCCGTACCTG 57.133 40.000 4.54 0.00 0.00 4.00
2453 2774 8.880991 AAATACATCTAGATACATCCGTACCT 57.119 34.615 4.54 0.00 0.00 3.08
2477 2798 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
2478 2799 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
2479 2800 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2480 2801 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2481 2802 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
2482 2803 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
2483 2804 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
2484 2805 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
2485 2806 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
2486 2807 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
2487 2808 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
2488 2809 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
2489 2810 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
2490 2811 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
2491 2812 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
2492 2813 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
2493 2814 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
2494 2815 4.092821 TCAAATTACTCGTCGCAGAAATGG 59.907 41.667 0.00 0.00 39.69 3.16
2495 2816 5.203358 TCAAATTACTCGTCGCAGAAATG 57.797 39.130 0.00 0.00 39.69 2.32
2500 2821 3.395671 CGTTTCAAATTACTCGTCGCAG 58.604 45.455 0.00 0.00 0.00 5.18
2502 2823 2.409378 TCCGTTTCAAATTACTCGTCGC 59.591 45.455 0.00 0.00 0.00 5.19
2507 2828 4.576879 ACTCCCTCCGTTTCAAATTACTC 58.423 43.478 0.00 0.00 0.00 2.59
2512 2833 6.749036 AGATATACTCCCTCCGTTTCAAAT 57.251 37.500 0.00 0.00 0.00 2.32
2515 2836 7.037080 TCCTATAGATATACTCCCTCCGTTTCA 60.037 40.741 0.00 0.00 0.00 2.69
2516 2837 7.344913 TCCTATAGATATACTCCCTCCGTTTC 58.655 42.308 0.00 0.00 0.00 2.78
2517 2838 7.281366 TCCTATAGATATACTCCCTCCGTTT 57.719 40.000 0.00 0.00 0.00 3.60
2518 2839 6.905067 TCCTATAGATATACTCCCTCCGTT 57.095 41.667 0.00 0.00 0.00 4.44
2532 2853 6.777213 ACAGACGTGAACTTTCCTATAGAT 57.223 37.500 0.00 0.00 0.00 1.98
2533 2854 6.183360 GCTACAGACGTGAACTTTCCTATAGA 60.183 42.308 0.00 0.00 0.00 1.98
2534 2855 5.972382 GCTACAGACGTGAACTTTCCTATAG 59.028 44.000 0.00 0.00 0.00 1.31
2535 2856 5.416639 TGCTACAGACGTGAACTTTCCTATA 59.583 40.000 0.00 0.00 0.00 1.31
2536 2857 4.219944 TGCTACAGACGTGAACTTTCCTAT 59.780 41.667 0.00 0.00 0.00 2.57
2537 2858 3.570975 TGCTACAGACGTGAACTTTCCTA 59.429 43.478 0.00 0.00 0.00 2.94
2539 2860 2.475487 GTGCTACAGACGTGAACTTTCC 59.525 50.000 0.00 0.00 0.00 3.13
2540 2861 2.153247 CGTGCTACAGACGTGAACTTTC 59.847 50.000 0.00 0.00 32.06 2.62
2542 2863 1.767289 CGTGCTACAGACGTGAACTT 58.233 50.000 0.00 0.00 32.06 2.66
2543 2864 3.474007 CGTGCTACAGACGTGAACT 57.526 52.632 0.00 0.00 32.06 3.01
2554 2875 3.612860 CCACAGAAATCAGTACGTGCTAC 59.387 47.826 5.64 0.00 0.00 3.58
2556 2877 2.688507 CCACAGAAATCAGTACGTGCT 58.311 47.619 0.00 0.00 0.00 4.40
2557 2878 1.128692 GCCACAGAAATCAGTACGTGC 59.871 52.381 0.00 0.00 0.00 5.34
2558 2879 2.412870 TGCCACAGAAATCAGTACGTG 58.587 47.619 0.00 0.00 0.00 4.49
2559 2880 2.612972 CCTGCCACAGAAATCAGTACGT 60.613 50.000 0.00 0.00 32.44 3.57
2560 2881 2.002586 CCTGCCACAGAAATCAGTACG 58.997 52.381 0.00 0.00 32.44 3.67
2561 2882 3.334583 TCCTGCCACAGAAATCAGTAC 57.665 47.619 0.00 0.00 32.44 2.73
2562 2883 4.365514 TTTCCTGCCACAGAAATCAGTA 57.634 40.909 0.00 0.00 32.44 2.74
2563 2884 2.957402 TTCCTGCCACAGAAATCAGT 57.043 45.000 0.00 0.00 32.44 3.41
2564 2885 4.796038 ATTTTCCTGCCACAGAAATCAG 57.204 40.909 0.00 0.00 32.44 2.90
2565 2886 5.070180 TCAAATTTTCCTGCCACAGAAATCA 59.930 36.000 0.00 0.00 32.44 2.57
2566 2887 5.406477 GTCAAATTTTCCTGCCACAGAAATC 59.594 40.000 0.00 0.00 32.44 2.17
2567 2888 5.070847 AGTCAAATTTTCCTGCCACAGAAAT 59.929 36.000 0.00 0.00 32.44 2.17
2568 2889 4.405358 AGTCAAATTTTCCTGCCACAGAAA 59.595 37.500 0.00 0.00 32.44 2.52
2569 2890 3.960102 AGTCAAATTTTCCTGCCACAGAA 59.040 39.130 0.00 0.00 32.44 3.02
2570 2891 3.318839 CAGTCAAATTTTCCTGCCACAGA 59.681 43.478 0.00 0.00 32.44 3.41
2571 2892 3.645884 CAGTCAAATTTTCCTGCCACAG 58.354 45.455 0.00 0.00 0.00 3.66
2572 2893 2.224018 GCAGTCAAATTTTCCTGCCACA 60.224 45.455 20.67 0.00 43.45 4.17
2573 2894 2.407090 GCAGTCAAATTTTCCTGCCAC 58.593 47.619 20.67 2.52 43.45 5.01
2574 2895 2.818130 GCAGTCAAATTTTCCTGCCA 57.182 45.000 20.67 0.00 43.45 4.92
2577 2898 4.869297 TGTTTGTGCAGTCAAATTTTCCTG 59.131 37.500 5.85 8.77 39.09 3.86
2618 2939 0.824182 ATTCCGAGCGGAGGGAGTAG 60.824 60.000 11.80 0.00 46.06 2.57
2619 2940 0.396695 AATTCCGAGCGGAGGGAGTA 60.397 55.000 11.80 0.00 46.06 2.59
2620 2941 0.396695 TAATTCCGAGCGGAGGGAGT 60.397 55.000 11.80 0.00 46.06 3.85
2621 2942 0.032267 GTAATTCCGAGCGGAGGGAG 59.968 60.000 11.80 0.00 46.06 4.30
2622 2943 0.396695 AGTAATTCCGAGCGGAGGGA 60.397 55.000 11.80 0.00 46.06 4.20
2623 2944 0.464452 AAGTAATTCCGAGCGGAGGG 59.536 55.000 11.80 0.00 46.06 4.30
2624 2945 1.134788 ACAAGTAATTCCGAGCGGAGG 60.135 52.381 11.80 0.74 46.06 4.30
2625 2946 2.159226 AGACAAGTAATTCCGAGCGGAG 60.159 50.000 11.80 1.40 46.06 4.63
2626 2947 1.822990 AGACAAGTAATTCCGAGCGGA 59.177 47.619 7.66 7.66 43.52 5.54
2627 2948 2.194271 GAGACAAGTAATTCCGAGCGG 58.806 52.381 1.74 1.74 0.00 5.52
2628 2949 1.846782 CGAGACAAGTAATTCCGAGCG 59.153 52.381 0.00 0.00 0.00 5.03
2629 2950 2.159282 TCCGAGACAAGTAATTCCGAGC 60.159 50.000 0.00 0.00 0.00 5.03
2630 2951 3.777465 TCCGAGACAAGTAATTCCGAG 57.223 47.619 0.00 0.00 0.00 4.63
2631 2952 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
2632 2953 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
2633 2954 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
2634 2955 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
2635 2956 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
2636 2957 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
2637 2958 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
2638 2959 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
2639 2960 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
2640 2961 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
2641 2962 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
2642 2963 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
2643 2964 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
2644 2965 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
2645 2966 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
2646 2967 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
2647 2968 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
2671 2992 9.698309 CAGAAATGGATGTATCTAGACGTATTT 57.302 33.333 0.00 0.00 0.00 1.40
2672 2993 7.815068 GCAGAAATGGATGTATCTAGACGTATT 59.185 37.037 0.00 0.00 0.00 1.89
2673 2994 7.316640 GCAGAAATGGATGTATCTAGACGTAT 58.683 38.462 0.00 0.00 0.00 3.06
2674 2995 6.567891 CGCAGAAATGGATGTATCTAGACGTA 60.568 42.308 0.00 0.00 0.00 3.57
2675 2996 5.533482 GCAGAAATGGATGTATCTAGACGT 58.467 41.667 0.00 0.00 0.00 4.34
2676 2997 4.618912 CGCAGAAATGGATGTATCTAGACG 59.381 45.833 0.00 0.00 0.00 4.18
2677 2998 5.631512 GTCGCAGAAATGGATGTATCTAGAC 59.368 44.000 0.00 0.00 39.69 2.59
2678 2999 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
2679 3000 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
2680 3001 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
2681 3002 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
2682 3003 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
2683 3004 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
2684 3005 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
2685 3006 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
2686 3007 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
2687 3008 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
2688 3009 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
2689 3010 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
2690 3011 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
2691 3012 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
2692 3013 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
2693 3014 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
2694 3015 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
2695 3016 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
2696 3017 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
2697 3018 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
2698 3019 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
2699 3020 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
2700 3021 2.301009 ACCTCCGTTCGGAATTACTTGT 59.699 45.455 14.79 2.13 33.41 3.16
2701 3022 2.968675 ACCTCCGTTCGGAATTACTTG 58.031 47.619 14.79 1.97 33.41 3.16
2702 3023 3.593096 GAACCTCCGTTCGGAATTACTT 58.407 45.455 14.79 2.67 39.14 2.24
2703 3024 3.242549 GAACCTCCGTTCGGAATTACT 57.757 47.619 14.79 0.00 39.14 2.24
2790 3111 3.857052 TCTTATTCCGTGACCATGTGTC 58.143 45.455 7.22 7.22 44.72 3.67
2792 3113 6.280643 TCTATTCTTATTCCGTGACCATGTG 58.719 40.000 0.00 0.00 0.00 3.21
2796 3117 5.365605 ACCATCTATTCTTATTCCGTGACCA 59.634 40.000 0.00 0.00 0.00 4.02
2797 3118 5.696724 CACCATCTATTCTTATTCCGTGACC 59.303 44.000 0.00 0.00 0.00 4.02
2798 3119 5.177696 GCACCATCTATTCTTATTCCGTGAC 59.822 44.000 0.00 0.00 0.00 3.67
2799 3120 5.070446 AGCACCATCTATTCTTATTCCGTGA 59.930 40.000 0.00 0.00 0.00 4.35
2800 3121 5.178252 CAGCACCATCTATTCTTATTCCGTG 59.822 44.000 0.00 0.00 0.00 4.94
2831 3162 1.552337 TCTCCAACTGCCTCATCACTC 59.448 52.381 0.00 0.00 0.00 3.51
2857 3188 2.234908 GTCTGAGACCACATACAAGCCT 59.765 50.000 0.00 0.00 0.00 4.58
2870 3201 3.104843 ACTTCAGCAAGTGTCTGAGAC 57.895 47.619 5.47 5.47 41.64 3.36
2874 3205 5.237127 TGAATGTTACTTCAGCAAGTGTCTG 59.763 40.000 0.00 0.00 43.17 3.51
2876 3207 5.237344 AGTGAATGTTACTTCAGCAAGTGTC 59.763 40.000 0.00 0.00 43.17 3.67
2879 3210 5.368145 TGAGTGAATGTTACTTCAGCAAGT 58.632 37.500 0.00 0.00 45.39 3.16
2880 3211 5.616424 GCTGAGTGAATGTTACTTCAGCAAG 60.616 44.000 16.72 0.00 42.35 4.01
2881 3212 4.214119 GCTGAGTGAATGTTACTTCAGCAA 59.786 41.667 16.72 0.00 42.35 3.91
2882 3213 3.748048 GCTGAGTGAATGTTACTTCAGCA 59.252 43.478 16.72 7.87 42.35 4.41
2883 3214 3.748048 TGCTGAGTGAATGTTACTTCAGC 59.252 43.478 15.24 15.24 42.68 4.26
2884 3215 4.391216 CCTGCTGAGTGAATGTTACTTCAG 59.609 45.833 0.00 0.00 35.88 3.02
2885 3216 4.202357 ACCTGCTGAGTGAATGTTACTTCA 60.202 41.667 0.00 0.00 32.84 3.02
2886 3217 4.319177 ACCTGCTGAGTGAATGTTACTTC 58.681 43.478 0.00 0.00 0.00 3.01
2888 3219 4.067896 CAACCTGCTGAGTGAATGTTACT 58.932 43.478 0.00 0.00 0.00 2.24
2892 3223 1.242076 GCAACCTGCTGAGTGAATGT 58.758 50.000 0.00 0.00 40.96 2.71
2923 3254 3.878778 AGCAGTTGGATGGTAGATGAAC 58.121 45.455 0.00 0.00 0.00 3.18
2942 3274 3.279434 CTTGATTACTGGGTGGGTTAGC 58.721 50.000 0.00 0.00 0.00 3.09
2945 3277 2.041216 GTCCTTGATTACTGGGTGGGTT 59.959 50.000 0.00 0.00 0.00 4.11
2960 3292 7.416154 TCTACTGAATTACGTTTTGTCCTTG 57.584 36.000 0.00 0.00 0.00 3.61
3009 3341 1.098050 CGAAGGAAAGGCAGATTGGG 58.902 55.000 0.00 0.00 0.00 4.12
3060 3392 5.395682 AAGTGTATTTGATGCAATGTGCT 57.604 34.783 0.00 0.00 45.31 4.40
3098 3430 6.658831 TCACTTTTGACGAATTAGAAAGCAG 58.341 36.000 0.00 0.00 32.11 4.24
3101 3433 7.414436 TGGTTCACTTTTGACGAATTAGAAAG 58.586 34.615 0.00 0.00 34.41 2.62
3108 3440 3.951680 ACCTTGGTTCACTTTTGACGAAT 59.048 39.130 0.00 0.00 0.00 3.34
3115 3447 7.898014 ATTTTCTCTACCTTGGTTCACTTTT 57.102 32.000 0.00 0.00 0.00 2.27
3121 3453 9.067986 CCCATTATATTTTCTCTACCTTGGTTC 57.932 37.037 0.00 0.00 0.00 3.62
3145 3477 6.924111 TCAATTGCAGAAACTAAAGAATCCC 58.076 36.000 0.00 0.00 0.00 3.85
3166 3498 6.283544 TGCTGGAATTTATTCAGCATTCAA 57.716 33.333 16.94 1.96 41.44 2.69
3168 3500 6.278363 ACATGCTGGAATTTATTCAGCATTC 58.722 36.000 23.95 0.58 46.66 2.67
3175 3507 8.009974 GTCGTATGTACATGCTGGAATTTATTC 58.990 37.037 18.81 0.00 36.08 1.75
3193 3525 2.621998 CGGAGGGAGTATTGTCGTATGT 59.378 50.000 0.00 0.00 0.00 2.29
3197 3529 1.475682 GAACGGAGGGAGTATTGTCGT 59.524 52.381 0.00 0.00 0.00 4.34
3198 3530 1.202382 GGAACGGAGGGAGTATTGTCG 60.202 57.143 0.00 0.00 0.00 4.35
3199 3531 2.598686 GGAACGGAGGGAGTATTGTC 57.401 55.000 0.00 0.00 0.00 3.18
3232 3564 9.646427 GTTCATAGTGAAATCTCTACAAAGACT 57.354 33.333 0.00 0.00 38.22 3.24
3233 3565 9.646427 AGTTCATAGTGAAATCTCTACAAAGAC 57.354 33.333 0.00 0.00 38.22 3.01
3239 3571 8.973378 GCATGTAGTTCATAGTGAAATCTCTAC 58.027 37.037 0.00 4.24 38.22 2.59
3240 3572 7.862873 CGCATGTAGTTCATAGTGAAATCTCTA 59.137 37.037 0.00 0.00 38.22 2.43
3241 3573 6.699204 CGCATGTAGTTCATAGTGAAATCTCT 59.301 38.462 0.00 0.00 38.22 3.10
3242 3574 6.074088 CCGCATGTAGTTCATAGTGAAATCTC 60.074 42.308 0.00 0.00 38.22 2.75
3243 3575 5.755375 CCGCATGTAGTTCATAGTGAAATCT 59.245 40.000 0.00 0.00 38.22 2.40
3244 3576 5.753438 TCCGCATGTAGTTCATAGTGAAATC 59.247 40.000 0.00 0.00 38.22 2.17
3245 3577 5.670485 TCCGCATGTAGTTCATAGTGAAAT 58.330 37.500 0.00 0.00 38.22 2.17
3246 3578 5.079689 TCCGCATGTAGTTCATAGTGAAA 57.920 39.130 0.00 0.00 38.22 2.69
3247 3579 4.729227 TCCGCATGTAGTTCATAGTGAA 57.271 40.909 0.00 0.00 34.67 3.18
3248 3580 4.099419 ACATCCGCATGTAGTTCATAGTGA 59.901 41.667 0.00 0.00 41.81 3.41
3249 3581 4.371786 ACATCCGCATGTAGTTCATAGTG 58.628 43.478 0.00 0.00 41.81 2.74
3250 3582 4.672587 ACATCCGCATGTAGTTCATAGT 57.327 40.909 0.00 0.00 41.81 2.12
3251 3583 9.670719 CTATATACATCCGCATGTAGTTCATAG 57.329 37.037 5.28 5.81 46.52 2.23
3252 3584 9.403583 TCTATATACATCCGCATGTAGTTCATA 57.596 33.333 5.28 0.00 46.52 2.15
3253 3585 8.293699 TCTATATACATCCGCATGTAGTTCAT 57.706 34.615 5.28 0.00 46.52 2.57
3254 3586 7.696992 TCTATATACATCCGCATGTAGTTCA 57.303 36.000 5.28 0.00 46.52 3.18
3255 3587 8.191446 ACATCTATATACATCCGCATGTAGTTC 58.809 37.037 5.28 0.00 46.52 3.01
3256 3588 8.067751 ACATCTATATACATCCGCATGTAGTT 57.932 34.615 5.28 0.00 46.52 2.24
3257 3589 7.646548 ACATCTATATACATCCGCATGTAGT 57.353 36.000 5.28 0.00 46.52 2.73
3286 3618 9.428097 GGAGCAAAATGAATGAATCTAAACTTT 57.572 29.630 0.00 0.00 0.00 2.66
3287 3619 7.756722 CGGAGCAAAATGAATGAATCTAAACTT 59.243 33.333 0.00 0.00 0.00 2.66
3288 3620 7.094205 ACGGAGCAAAATGAATGAATCTAAACT 60.094 33.333 0.00 0.00 0.00 2.66
3289 3621 7.029563 ACGGAGCAAAATGAATGAATCTAAAC 58.970 34.615 0.00 0.00 0.00 2.01
3290 3622 7.156876 ACGGAGCAAAATGAATGAATCTAAA 57.843 32.000 0.00 0.00 0.00 1.85
3291 3623 6.757897 ACGGAGCAAAATGAATGAATCTAA 57.242 33.333 0.00 0.00 0.00 2.10
3292 3624 9.725019 ATATACGGAGCAAAATGAATGAATCTA 57.275 29.630 0.00 0.00 0.00 1.98
3293 3625 6.949352 ATACGGAGCAAAATGAATGAATCT 57.051 33.333 0.00 0.00 0.00 2.40
3294 3626 9.979270 CTATATACGGAGCAAAATGAATGAATC 57.021 33.333 0.00 0.00 0.00 2.52
3295 3627 9.507329 ACTATATACGGAGCAAAATGAATGAAT 57.493 29.630 0.00 0.00 0.00 2.57
3296 3628 8.902540 ACTATATACGGAGCAAAATGAATGAA 57.097 30.769 0.00 0.00 0.00 2.57
3297 3629 7.602644 GGACTATATACGGAGCAAAATGAATGA 59.397 37.037 0.00 0.00 0.00 2.57
3298 3630 7.387673 TGGACTATATACGGAGCAAAATGAATG 59.612 37.037 0.00 0.00 0.00 2.67
3299 3631 7.387948 GTGGACTATATACGGAGCAAAATGAAT 59.612 37.037 0.00 0.00 0.00 2.57
3300 3632 6.704493 GTGGACTATATACGGAGCAAAATGAA 59.296 38.462 0.00 0.00 0.00 2.57
3301 3633 6.041637 AGTGGACTATATACGGAGCAAAATGA 59.958 38.462 0.00 0.00 0.00 2.57
3302 3634 6.223852 AGTGGACTATATACGGAGCAAAATG 58.776 40.000 0.00 0.00 0.00 2.32
3303 3635 6.420913 AGTGGACTATATACGGAGCAAAAT 57.579 37.500 0.00 0.00 0.00 1.82
3304 3636 5.864418 AGTGGACTATATACGGAGCAAAA 57.136 39.130 0.00 0.00 0.00 2.44
3305 3637 5.864418 AAGTGGACTATATACGGAGCAAA 57.136 39.130 0.00 0.00 0.00 3.68
3306 3638 6.016527 CACTAAGTGGACTATATACGGAGCAA 60.017 42.308 0.00 0.00 0.00 3.91
3307 3639 5.472478 CACTAAGTGGACTATATACGGAGCA 59.528 44.000 0.00 0.00 0.00 4.26
3308 3640 5.704515 TCACTAAGTGGACTATATACGGAGC 59.295 44.000 0.00 0.00 33.87 4.70
3309 3641 7.741027 TTCACTAAGTGGACTATATACGGAG 57.259 40.000 0.00 0.00 33.87 4.63
3310 3642 8.701908 ATTTCACTAAGTGGACTATATACGGA 57.298 34.615 0.00 0.00 33.87 4.69
3311 3643 8.794553 AGATTTCACTAAGTGGACTATATACGG 58.205 37.037 0.00 0.00 33.87 4.02
3312 3644 9.828852 GAGATTTCACTAAGTGGACTATATACG 57.171 37.037 0.00 0.00 33.87 3.06
3316 3648 9.916360 TGTAGAGATTTCACTAAGTGGACTATA 57.084 33.333 0.00 0.00 33.87 1.31
3317 3649 8.824756 TGTAGAGATTTCACTAAGTGGACTAT 57.175 34.615 0.00 0.00 33.87 2.12
3318 3650 8.645814 TTGTAGAGATTTCACTAAGTGGACTA 57.354 34.615 0.00 0.00 33.87 2.59
3319 3651 7.540474 TTGTAGAGATTTCACTAAGTGGACT 57.460 36.000 0.00 0.00 33.87 3.85
3320 3652 8.088981 TCTTTGTAGAGATTTCACTAAGTGGAC 58.911 37.037 0.00 0.00 33.87 4.02
3321 3653 8.190326 TCTTTGTAGAGATTTCACTAAGTGGA 57.810 34.615 0.00 0.00 33.87 4.02
3322 3654 9.442047 AATCTTTGTAGAGATTTCACTAAGTGG 57.558 33.333 0.00 0.00 42.24 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.