Multiple sequence alignment - TraesCS2D01G496100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G496100 chr2D 100.000 5939 0 0 1 5939 592633039 592627101 0.000000e+00 10968.0
1 TraesCS2D01G496100 chr2D 91.609 727 32 16 982 1693 533818515 533819227 0.000000e+00 977.0
2 TraesCS2D01G496100 chr2D 90.857 175 15 1 2990 3164 342099633 342099806 3.580000e-57 233.0
3 TraesCS2D01G496100 chr2D 89.189 148 15 1 3014 3161 78690802 78690948 3.660000e-42 183.0
4 TraesCS2D01G496100 chr2D 82.796 93 8 5 5548 5633 21315112 21315021 6.380000e-10 76.8
5 TraesCS2D01G496100 chr2B 91.986 1984 110 26 52 1994 718601969 718599994 0.000000e+00 2737.0
6 TraesCS2D01G496100 chr2B 93.186 1585 66 19 2549 4126 718599470 718597921 0.000000e+00 2290.0
7 TraesCS2D01G496100 chr2B 91.069 1366 78 21 4130 5478 718597874 718596536 0.000000e+00 1807.0
8 TraesCS2D01G496100 chr2B 93.384 393 21 3 2027 2418 718599926 718599538 1.440000e-160 577.0
9 TraesCS2D01G496100 chr2B 90.857 175 15 1 2990 3164 407236176 407236349 3.580000e-57 233.0
10 TraesCS2D01G496100 chr2B 80.000 130 18 3 3869 3996 590633691 590633568 8.200000e-14 89.8
11 TraesCS2D01G496100 chr2A 93.552 1737 68 17 1795 3521 727188370 727186668 0.000000e+00 2547.0
12 TraesCS2D01G496100 chr2A 89.906 1813 115 42 1 1770 727190151 727188364 0.000000e+00 2272.0
13 TraesCS2D01G496100 chr2A 95.300 1149 39 9 4130 5272 727185919 727184780 0.000000e+00 1808.0
14 TraesCS2D01G496100 chr2A 91.689 746 34 15 982 1714 576661912 576662642 0.000000e+00 1009.0
15 TraesCS2D01G496100 chr2A 92.810 612 38 4 3520 4126 727186576 727185966 0.000000e+00 881.0
16 TraesCS2D01G496100 chr2A 90.286 175 15 2 2990 3164 451810376 451810548 1.670000e-55 228.0
17 TraesCS2D01G496100 chr2A 84.925 199 9 10 5650 5836 727184434 727184245 1.310000e-41 182.0
18 TraesCS2D01G496100 chr2A 93.750 96 4 2 1957 2050 632952997 632952902 6.200000e-30 143.0
19 TraesCS2D01G496100 chr2A 91.525 59 5 0 3734 3792 727186394 727186336 1.370000e-11 82.4
20 TraesCS2D01G496100 chrUn 91.309 886 43 18 982 1852 25807399 25806533 0.000000e+00 1179.0
21 TraesCS2D01G496100 chrUn 91.309 886 43 18 982 1852 287201291 287200425 0.000000e+00 1179.0
22 TraesCS2D01G496100 chrUn 91.299 885 43 18 983 1852 213906387 213905522 0.000000e+00 1177.0
23 TraesCS2D01G496100 chrUn 91.543 875 42 16 983 1842 239203105 239203962 0.000000e+00 1177.0
24 TraesCS2D01G496100 chr1A 88.992 863 70 16 988 1840 419804674 419803827 0.000000e+00 1044.0
25 TraesCS2D01G496100 chr1D 91.010 723 41 15 982 1693 263326807 263327516 0.000000e+00 953.0
26 TraesCS2D01G496100 chr1D 89.143 175 18 1 2989 3163 250738442 250738615 3.600000e-52 217.0
27 TraesCS2D01G496100 chr1D 97.059 34 1 0 4055 4088 164446059 164446092 2.310000e-04 58.4
28 TraesCS2D01G496100 chr6B 87.702 805 65 20 1035 1826 441044500 441043717 0.000000e+00 907.0
29 TraesCS2D01G496100 chr6B 96.591 88 2 1 1959 2045 13827524 13827611 1.730000e-30 145.0
30 TraesCS2D01G496100 chr5A 94.845 97 4 1 1950 2045 450750803 450750707 3.710000e-32 150.0
31 TraesCS2D01G496100 chr5B 96.591 88 2 1 1959 2045 62940321 62940408 1.730000e-30 145.0
32 TraesCS2D01G496100 chr5B 92.784 97 6 1 1950 2045 411034873 411034777 8.030000e-29 139.0
33 TraesCS2D01G496100 chr3B 94.565 92 4 1 1961 2051 65214056 65214147 2.230000e-29 141.0
34 TraesCS2D01G496100 chr5D 92.784 97 6 1 1950 2045 350331960 350331864 8.030000e-29 139.0
35 TraesCS2D01G496100 chr4D 92.000 100 5 3 1961 2058 469582356 469582258 2.890000e-28 137.0
36 TraesCS2D01G496100 chr4D 85.507 69 9 1 2989 3057 68873618 68873551 2.970000e-08 71.3
37 TraesCS2D01G496100 chr3D 80.000 175 18 10 2990 3164 100224840 100224997 4.860000e-21 113.0
38 TraesCS2D01G496100 chr4B 88.406 69 7 1 2989 3057 502396781 502396848 1.370000e-11 82.4
39 TraesCS2D01G496100 chr7A 78.676 136 14 8 2991 3125 468462363 468462484 6.380000e-10 76.8
40 TraesCS2D01G496100 chr7A 83.721 86 8 4 3937 4018 468602336 468602253 6.380000e-10 76.8
41 TraesCS2D01G496100 chr7A 88.679 53 3 1 4059 4108 280283661 280283713 1.790000e-05 62.1
42 TraesCS2D01G496100 chr7A 100.000 28 0 0 4061 4088 19901663 19901636 1.100000e-02 52.8
43 TraesCS2D01G496100 chr1B 97.059 34 1 0 4055 4088 225788042 225788009 2.310000e-04 58.4
44 TraesCS2D01G496100 chr4A 100.000 28 0 0 4061 4088 713520968 713520995 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G496100 chr2D 592627101 592633039 5938 True 10968.00 10968 100.000000 1 5939 1 chr2D.!!$R2 5938
1 TraesCS2D01G496100 chr2D 533818515 533819227 712 False 977.00 977 91.609000 982 1693 1 chr2D.!!$F3 711
2 TraesCS2D01G496100 chr2B 718596536 718601969 5433 True 1852.75 2737 92.406250 52 5478 4 chr2B.!!$R2 5426
3 TraesCS2D01G496100 chr2A 727184245 727190151 5906 True 1295.40 2547 91.336333 1 5836 6 chr2A.!!$R2 5835
4 TraesCS2D01G496100 chr2A 576661912 576662642 730 False 1009.00 1009 91.689000 982 1714 1 chr2A.!!$F2 732
5 TraesCS2D01G496100 chrUn 25806533 25807399 866 True 1179.00 1179 91.309000 982 1852 1 chrUn.!!$R1 870
6 TraesCS2D01G496100 chrUn 287200425 287201291 866 True 1179.00 1179 91.309000 982 1852 1 chrUn.!!$R3 870
7 TraesCS2D01G496100 chrUn 213905522 213906387 865 True 1177.00 1177 91.299000 983 1852 1 chrUn.!!$R2 869
8 TraesCS2D01G496100 chrUn 239203105 239203962 857 False 1177.00 1177 91.543000 983 1842 1 chrUn.!!$F1 859
9 TraesCS2D01G496100 chr1A 419803827 419804674 847 True 1044.00 1044 88.992000 988 1840 1 chr1A.!!$R1 852
10 TraesCS2D01G496100 chr1D 263326807 263327516 709 False 953.00 953 91.010000 982 1693 1 chr1D.!!$F3 711
11 TraesCS2D01G496100 chr6B 441043717 441044500 783 True 907.00 907 87.702000 1035 1826 1 chr6B.!!$R1 791

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
806 847 0.037590 CGGATGGGGTCTTTTCACCA 59.962 55.0 0.00 0.00 45.53 4.17 F
898 942 0.185901 AGAGGGGAAGCAAAGCACAA 59.814 50.0 0.00 0.00 0.00 3.33 F
901 945 0.597377 GGGGAAGCAAAGCACAAACG 60.597 55.0 0.00 0.00 0.00 3.60 F
1924 2006 2.160417 GTGCTTCTAGTTCCACATGTGC 59.840 50.0 20.81 7.08 0.00 4.57 F
3043 3171 1.267121 GTCAGGTGCTGAGTAGGGAA 58.733 55.0 0.00 0.00 41.46 3.97 F
3510 3638 0.183492 ACTTGCAGGTTTGGCTCTCA 59.817 50.0 0.00 0.00 0.00 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2446 2572 0.110295 CAGTCCCCACCATCAACACA 59.890 55.0 0.00 0.00 0.00 3.72 R
2821 2949 0.107643 TTTCTGATGGCACGTGGACA 59.892 50.0 18.88 6.85 40.35 4.02 R
2967 3095 5.591099 TGATTTCTTGCAGAAAAAGTGACC 58.409 37.5 13.04 2.24 46.08 4.02 R
3119 3247 0.179100 ATCGGCATCTCGGTCAGTTG 60.179 55.0 0.00 0.00 0.00 3.16 R
4000 4225 0.657312 TTTTCATCTAGGCATGCGCG 59.343 50.0 12.44 0.00 39.92 6.86 R
5532 5992 0.039527 GTTTTCGTTTCGCCATGCCT 60.040 50.0 0.00 0.00 0.00 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.327214 TGAATTATTGGCTGGTATTTTGAACC 58.673 34.615 0.00 0.00 37.53 3.62
27 28 6.672266 TTATTGGCTGGTATTTTGAACCAA 57.328 33.333 0.00 0.00 46.14 3.67
28 29 4.599047 TTGGCTGGTATTTTGAACCAAG 57.401 40.909 0.00 0.00 46.14 3.61
30 31 4.219115 TGGCTGGTATTTTGAACCAAGAA 58.781 39.130 0.00 0.00 46.14 2.52
31 32 4.038642 TGGCTGGTATTTTGAACCAAGAAC 59.961 41.667 0.00 0.00 46.14 3.01
78 82 7.534085 TTACGACAGTAGCCTTAATCATTTG 57.466 36.000 0.00 0.00 33.87 2.32
112 116 9.216117 ACAGAGTAACCATTTGAAGTACATTAC 57.784 33.333 0.00 0.00 0.00 1.89
121 128 7.964559 CCATTTGAAGTACATTACACATCACTG 59.035 37.037 0.00 0.00 0.00 3.66
232 247 3.501828 CCACATCCGTCTAGAGATCAGAG 59.498 52.174 0.00 0.00 0.00 3.35
233 248 4.133820 CACATCCGTCTAGAGATCAGAGT 58.866 47.826 0.00 0.00 0.00 3.24
456 473 1.967319 TTGCCATCTCGCCTTATTCC 58.033 50.000 0.00 0.00 0.00 3.01
478 495 0.740868 TGCGCCCAAGAAATCGAGAG 60.741 55.000 4.18 0.00 0.00 3.20
509 526 5.429130 GAGAGGAACTAGGGTTACATTTGG 58.571 45.833 0.00 0.00 41.55 3.28
514 531 3.805207 ACTAGGGTTACATTTGGATCGC 58.195 45.455 0.00 0.00 0.00 4.58
521 538 5.273944 GGTTACATTTGGATCGCAGAAATC 58.726 41.667 0.00 0.00 43.58 2.17
523 540 2.355756 ACATTTGGATCGCAGAAATCGG 59.644 45.455 0.00 0.00 43.58 4.18
540 557 2.072487 GGGTGAGATGGCAGGGCTA 61.072 63.158 0.00 0.00 0.00 3.93
547 564 1.686325 GATGGCAGGGCTAGGAACGA 61.686 60.000 0.00 0.00 0.00 3.85
548 565 1.972660 ATGGCAGGGCTAGGAACGAC 61.973 60.000 0.00 0.00 0.00 4.34
549 566 2.656069 GGCAGGGCTAGGAACGACA 61.656 63.158 0.00 0.00 0.00 4.35
550 567 1.295423 GCAGGGCTAGGAACGACAA 59.705 57.895 0.00 0.00 0.00 3.18
551 568 1.019805 GCAGGGCTAGGAACGACAAC 61.020 60.000 0.00 0.00 0.00 3.32
556 573 2.067013 GGCTAGGAACGACAACAAGAC 58.933 52.381 0.00 0.00 0.00 3.01
558 575 2.606308 GCTAGGAACGACAACAAGACGA 60.606 50.000 0.00 0.00 38.73 4.20
560 577 1.407979 AGGAACGACAACAAGACGAGT 59.592 47.619 0.00 0.00 38.73 4.18
565 582 4.139183 ACGACAACAAGACGAGTAGTAC 57.861 45.455 0.00 0.00 38.73 2.73
740 781 1.150081 GATGGGCCAGGATCCACAG 59.850 63.158 15.82 2.68 35.67 3.66
746 787 1.221840 CCAGGATCCACAGGGTTCG 59.778 63.158 15.82 0.00 34.29 3.95
804 845 1.644786 CGCGGATGGGGTCTTTTCAC 61.645 60.000 0.00 0.00 0.00 3.18
806 847 0.037590 CGGATGGGGTCTTTTCACCA 59.962 55.000 0.00 0.00 45.53 4.17
835 876 5.361857 CCCCTCGACAGAACCTACTAATTTA 59.638 44.000 0.00 0.00 0.00 1.40
873 917 2.103042 CGCCTCCGCAAGAAAGGAG 61.103 63.158 4.61 4.61 43.96 3.69
898 942 0.185901 AGAGGGGAAGCAAAGCACAA 59.814 50.000 0.00 0.00 0.00 3.33
899 943 1.039856 GAGGGGAAGCAAAGCACAAA 58.960 50.000 0.00 0.00 0.00 2.83
900 944 0.752658 AGGGGAAGCAAAGCACAAAC 59.247 50.000 0.00 0.00 0.00 2.93
901 945 0.597377 GGGGAAGCAAAGCACAAACG 60.597 55.000 0.00 0.00 0.00 3.60
1328 1394 4.537433 GCCCTGGCCGTAGCTCTG 62.537 72.222 0.00 0.00 39.73 3.35
1329 1395 3.077556 CCCTGGCCGTAGCTCTGT 61.078 66.667 0.00 0.00 39.73 3.41
1577 1654 3.138304 TGGACTTGCATGTGTAGTTGTC 58.862 45.455 10.37 0.00 0.00 3.18
1752 1834 4.551388 AGAAGCTCTTCTCAGTTTGTACG 58.449 43.478 6.33 0.00 46.13 3.67
1836 1918 2.421619 GTGAACTCTTCAAGGAGGCTG 58.578 52.381 0.00 0.00 42.15 4.85
1868 1950 9.482627 CTCTATGAAGTATTTACCATTCAGTCC 57.517 37.037 0.00 0.00 35.31 3.85
1924 2006 2.160417 GTGCTTCTAGTTCCACATGTGC 59.840 50.000 20.81 7.08 0.00 4.57
2056 2181 3.114065 GAGGGAGTACAAATTAGTCGCG 58.886 50.000 0.00 0.00 35.69 5.87
2079 2204 3.902218 AGCTCCCAAAATGCATAGCTAA 58.098 40.909 16.00 0.00 38.48 3.09
2152 2277 2.691409 TGGCCTTATGTAGAGTGTGC 57.309 50.000 3.32 0.00 0.00 4.57
2207 2332 8.470002 GTTATGAAAGAATTGGCAATCTTAGGT 58.530 33.333 14.04 9.64 34.90 3.08
2211 2336 8.469200 TGAAAGAATTGGCAATCTTAGGTATTG 58.531 33.333 14.04 0.00 34.90 1.90
2289 2415 4.508662 CTCTCCCTCCATCAGTAAACAAC 58.491 47.826 0.00 0.00 0.00 3.32
2319 2445 8.539770 TGTTTAATCAACTTGTTTGCTTGAAA 57.460 26.923 0.00 0.00 36.21 2.69
2320 2446 8.993121 TGTTTAATCAACTTGTTTGCTTGAAAA 58.007 25.926 0.00 0.00 36.21 2.29
2321 2447 9.818796 GTTTAATCAACTTGTTTGCTTGAAAAA 57.181 25.926 0.00 0.00 34.88 1.94
2336 2462 5.418310 TTGAAAAACCGACTCATGACTTC 57.582 39.130 0.00 0.00 0.00 3.01
2342 2468 2.230025 ACCGACTCATGACTTCAGTGAG 59.770 50.000 13.01 13.01 43.76 3.51
2343 2469 2.257894 CGACTCATGACTTCAGTGAGC 58.742 52.381 13.89 8.96 42.33 4.26
2371 2497 7.425606 GTTGCACCTTTATATGATTTCGGAAT 58.574 34.615 0.00 0.00 0.00 3.01
2407 2533 9.697250 CAGTGTTAAAATTACCGTACATACATG 57.303 33.333 0.00 0.00 0.00 3.21
2435 2561 4.443394 GCGTTCACTACCCTTTATGTATCG 59.557 45.833 0.00 0.00 0.00 2.92
2486 2612 3.332187 TGGGTTTGGTGATGGAAGTATCA 59.668 43.478 0.00 0.00 34.83 2.15
2516 2643 5.007682 TGCCACCCTTCTAAACTAATGTTC 58.992 41.667 0.00 0.00 34.96 3.18
2529 2656 7.703058 AAACTAATGTTCTTCCTATGGGTTG 57.297 36.000 0.00 0.00 34.96 3.77
2531 2658 3.669939 ATGTTCTTCCTATGGGTTGGG 57.330 47.619 0.00 0.00 0.00 4.12
2821 2949 5.501156 ACTCAGAAAAGTCAGAAGGTGTTT 58.499 37.500 0.00 0.00 0.00 2.83
2967 3095 4.041049 CAGTCACGCTTTCTGATAGCTAG 58.959 47.826 16.22 9.51 36.49 3.42
2969 3097 3.024547 TCACGCTTTCTGATAGCTAGGT 58.975 45.455 16.22 0.00 36.49 3.08
2970 3098 3.066900 TCACGCTTTCTGATAGCTAGGTC 59.933 47.826 16.22 0.00 36.49 3.85
2971 3099 3.024547 ACGCTTTCTGATAGCTAGGTCA 58.975 45.455 16.22 0.00 36.49 4.02
2972 3100 3.181485 ACGCTTTCTGATAGCTAGGTCAC 60.181 47.826 16.22 0.00 36.49 3.67
2973 3101 3.067461 CGCTTTCTGATAGCTAGGTCACT 59.933 47.826 16.22 0.00 36.49 3.41
2974 3102 4.440802 CGCTTTCTGATAGCTAGGTCACTT 60.441 45.833 16.22 0.00 36.49 3.16
3009 3137 9.775854 AGAAATCAATGTTCAGGATATCTGTAG 57.224 33.333 2.05 0.00 43.76 2.74
3043 3171 1.267121 GTCAGGTGCTGAGTAGGGAA 58.733 55.000 0.00 0.00 41.46 3.97
3052 3180 5.071923 GGTGCTGAGTAGGGAATAAATAGGT 59.928 44.000 0.00 0.00 0.00 3.08
3057 3185 7.389053 GCTGAGTAGGGAATAAATAGGTGAATG 59.611 40.741 0.00 0.00 0.00 2.67
3063 3191 7.062957 AGGGAATAAATAGGTGAATGTTCCAG 58.937 38.462 0.00 0.00 36.47 3.86
3064 3192 6.833933 GGGAATAAATAGGTGAATGTTCCAGT 59.166 38.462 0.00 0.00 36.47 4.00
3065 3193 7.342026 GGGAATAAATAGGTGAATGTTCCAGTT 59.658 37.037 0.00 0.00 36.47 3.16
3066 3194 9.403583 GGAATAAATAGGTGAATGTTCCAGTTA 57.596 33.333 0.00 0.00 35.22 2.24
3070 3198 7.553881 AATAGGTGAATGTTCCAGTTAATCG 57.446 36.000 0.00 0.00 0.00 3.34
3071 3199 4.261801 AGGTGAATGTTCCAGTTAATCGG 58.738 43.478 0.00 0.00 0.00 4.18
3072 3200 3.181500 GGTGAATGTTCCAGTTAATCGGC 60.181 47.826 0.00 0.00 0.00 5.54
3073 3201 3.689649 GTGAATGTTCCAGTTAATCGGCT 59.310 43.478 0.00 0.00 0.00 5.52
3074 3202 3.689161 TGAATGTTCCAGTTAATCGGCTG 59.311 43.478 0.00 0.00 0.00 4.85
3075 3203 3.627395 ATGTTCCAGTTAATCGGCTGA 57.373 42.857 0.00 0.00 34.87 4.26
3076 3204 3.627395 TGTTCCAGTTAATCGGCTGAT 57.373 42.857 0.90 0.90 34.87 2.90
3077 3205 4.746535 TGTTCCAGTTAATCGGCTGATA 57.253 40.909 8.86 0.00 34.87 2.15
3078 3206 5.092554 TGTTCCAGTTAATCGGCTGATAA 57.907 39.130 8.86 1.12 34.87 1.75
3079 3207 5.492895 TGTTCCAGTTAATCGGCTGATAAA 58.507 37.500 8.86 0.00 34.87 1.40
3080 3208 6.119536 TGTTCCAGTTAATCGGCTGATAAAT 58.880 36.000 8.86 0.55 34.87 1.40
3081 3209 6.260050 TGTTCCAGTTAATCGGCTGATAAATC 59.740 38.462 8.86 0.00 34.87 2.17
3082 3210 4.988540 TCCAGTTAATCGGCTGATAAATCG 59.011 41.667 8.86 0.00 34.87 3.34
3119 3247 1.103803 TGACCCACTGAGTAGCGATC 58.896 55.000 0.00 0.00 0.00 3.69
3368 3496 2.929398 GTGCCCCTAATTTTCATTTGCG 59.071 45.455 0.00 0.00 0.00 4.85
3510 3638 0.183492 ACTTGCAGGTTTGGCTCTCA 59.817 50.000 0.00 0.00 0.00 3.27
3642 3863 1.360852 TGTTGCCCCCATGAACCTTAT 59.639 47.619 0.00 0.00 0.00 1.73
3645 3866 4.417183 TGTTGCCCCCATGAACCTTATATA 59.583 41.667 0.00 0.00 0.00 0.86
3789 4011 4.938226 ACTCTCCGGAAGAAAATTGTGATC 59.062 41.667 17.18 0.00 32.23 2.92
3798 4020 8.082242 CGGAAGAAAATTGTGATCCTTTTTAGT 58.918 33.333 0.00 0.00 0.00 2.24
3824 4046 8.966868 TGATGGATGTTTTTCCTTAGGAATTAC 58.033 33.333 15.09 15.03 41.71 1.89
3850 4072 1.065491 AGTTGTGCAACCAGTGAGTGA 60.065 47.619 11.00 0.00 42.06 3.41
3886 4108 1.007238 TCTTAGGCCCTACTCAGTGCT 59.993 52.381 0.00 0.00 0.00 4.40
3887 4109 1.834263 CTTAGGCCCTACTCAGTGCTT 59.166 52.381 0.00 0.00 0.00 3.91
3888 4110 2.840640 TAGGCCCTACTCAGTGCTTA 57.159 50.000 0.00 0.00 0.00 3.09
3930 4152 0.704076 ATGGCTGCCAAGTAGGGAAA 59.296 50.000 27.24 0.00 37.23 3.13
3968 4193 8.374743 GGCAAGATAATTAAGAAGAGAGAGGAT 58.625 37.037 0.00 0.00 0.00 3.24
4000 4225 3.190874 CCAGGAAGAAACGATGCTAGAC 58.809 50.000 0.00 0.00 0.00 2.59
4021 4246 1.268743 GCGCATGCCTAGATGAAAACC 60.269 52.381 13.15 0.00 33.98 3.27
4057 4282 6.451064 AAAAAGAAGAAAACTCGTCCACAT 57.549 33.333 0.00 0.00 0.00 3.21
4087 4312 5.789643 AATGAAGGAAGCTTAGCAACAAA 57.210 34.783 7.07 0.00 0.00 2.83
4088 4313 4.568152 TGAAGGAAGCTTAGCAACAAAC 57.432 40.909 7.07 0.00 0.00 2.93
4089 4314 3.003275 TGAAGGAAGCTTAGCAACAAACG 59.997 43.478 7.07 0.00 0.00 3.60
4117 4345 0.906775 ATGCAATGGGAAAGGCCTTG 59.093 50.000 21.33 6.34 36.66 3.61
4126 4354 0.887387 GAAAGGCCTTGGTGCGTGTA 60.887 55.000 21.33 0.00 0.00 2.90
4127 4355 1.170290 AAAGGCCTTGGTGCGTGTAC 61.170 55.000 21.33 0.00 0.00 2.90
4128 4356 2.281208 GGCCTTGGTGCGTGTACA 60.281 61.111 0.00 0.00 0.00 2.90
4150 4421 2.290577 AAGGGTGCTTTAGAGCCTTCAG 60.291 50.000 2.32 0.00 46.14 3.02
4184 4456 9.822727 CTTTGGTTGGGGGATATACTATATTTT 57.177 33.333 0.00 0.00 0.00 1.82
4206 4478 8.545229 TTTTGGTGGTTAAATCATGCTTTATG 57.455 30.769 2.76 0.00 38.17 1.90
4209 4481 7.767261 TGGTGGTTAAATCATGCTTTATGTAC 58.233 34.615 2.76 0.00 38.01 2.90
4392 4664 8.743714 AGTTGAGAATAGTTCAAAATTCATCCC 58.256 33.333 0.00 0.00 36.41 3.85
4416 4689 5.597813 AATTCTGTTACTGAAGCAGTTCG 57.402 39.130 10.23 0.00 42.59 3.95
4426 4699 4.516698 ACTGAAGCAGTTCGACATTTTCAT 59.483 37.500 0.00 0.00 42.59 2.57
4434 4707 6.025896 CAGTTCGACATTTTCATTCATGGAG 58.974 40.000 0.00 0.00 0.00 3.86
4435 4708 5.707298 AGTTCGACATTTTCATTCATGGAGT 59.293 36.000 0.00 0.00 0.00 3.85
4436 4709 5.550232 TCGACATTTTCATTCATGGAGTG 57.450 39.130 0.00 0.00 0.00 3.51
4437 4710 5.003160 TCGACATTTTCATTCATGGAGTGT 58.997 37.500 0.00 0.00 0.00 3.55
4456 4729 9.173021 TGGAGTGTTGTAATATATTTGTTCTGG 57.827 33.333 2.68 0.00 0.00 3.86
4568 4842 2.369532 AGTTTACCAGAACCGGCTTGTA 59.630 45.455 0.00 0.00 0.00 2.41
4573 4847 1.065418 CCAGAACCGGCTTGTATTCCT 60.065 52.381 0.00 0.00 0.00 3.36
4733 5007 6.312645 CAACAAGGTAAGTTGTTTTTGTCG 57.687 37.500 0.00 0.00 46.26 4.35
4762 5036 0.962356 AGCTGTTGCCAATCCTTCCG 60.962 55.000 0.00 0.00 40.80 4.30
4765 5039 0.400213 TGTTGCCAATCCTTCCGTCT 59.600 50.000 0.00 0.00 0.00 4.18
4768 5042 1.533625 TGCCAATCCTTCCGTCTTTG 58.466 50.000 0.00 0.00 0.00 2.77
4771 5045 0.447801 CAATCCTTCCGTCTTTGGCG 59.552 55.000 0.00 0.00 0.00 5.69
4813 5092 9.832445 TGTTGATCTTATGAAGTTATACCCTTC 57.168 33.333 0.00 4.93 39.01 3.46
5177 5457 2.027653 TCATCTGCCGTGTCATGGTTTA 60.028 45.455 12.77 0.00 0.00 2.01
5261 5541 4.267349 TGTCTTGGTACTTTGGTAGAGC 57.733 45.455 0.00 0.00 0.00 4.09
5282 5563 1.542030 CGTCAGGCTCAGAGTTACACT 59.458 52.381 0.00 0.00 0.00 3.55
5304 5595 6.020281 CACTCTTTGGACTAGAATCGATTTCG 60.020 42.308 12.81 6.43 39.46 3.46
5306 5597 6.034591 TCTTTGGACTAGAATCGATTTCGTC 58.965 40.000 12.81 16.81 39.46 4.20
5307 5598 4.976224 TGGACTAGAATCGATTTCGTCA 57.024 40.909 24.11 13.04 39.46 4.35
5313 5604 7.166142 GGACTAGAATCGATTTCGTCAGTAAAG 59.834 40.741 24.11 10.55 39.46 1.85
5335 5626 5.003804 AGTTTTGACATAGCTTGGTACTGG 58.996 41.667 0.00 0.00 0.00 4.00
5342 5633 0.249398 AGCTTGGTACTGGTAAGGCG 59.751 55.000 0.00 0.00 0.00 5.52
5346 5637 0.742505 TGGTACTGGTAAGGCGATCG 59.257 55.000 11.69 11.69 0.00 3.69
5353 5644 1.143969 GGTAAGGCGATCGAACACCG 61.144 60.000 21.57 0.00 40.25 4.94
5354 5645 1.140161 TAAGGCGATCGAACACCGG 59.860 57.895 21.57 0.00 39.14 5.28
5358 5649 2.578713 CGATCGAACACCGGACGG 60.579 66.667 10.26 9.56 39.14 4.79
5363 5654 1.214589 CGAACACCGGACGGAAGAT 59.785 57.895 18.80 4.17 38.96 2.40
5364 5655 0.452987 CGAACACCGGACGGAAGATA 59.547 55.000 18.80 0.00 38.96 1.98
5369 5660 2.019249 CACCGGACGGAAGATAGTACA 58.981 52.381 18.80 0.00 38.96 2.90
5389 5680 7.361127 AGTACATGTACAGTTATATCGACTGC 58.639 38.462 32.02 4.69 46.53 4.40
5390 5681 5.529791 ACATGTACAGTTATATCGACTGCC 58.470 41.667 15.45 9.37 46.53 4.85
5429 5720 1.134551 GGCACAGAAAAGGCAACCAAA 60.135 47.619 0.00 0.00 37.17 3.28
5430 5721 1.933181 GCACAGAAAAGGCAACCAAAC 59.067 47.619 0.00 0.00 37.17 2.93
5431 5722 2.418609 GCACAGAAAAGGCAACCAAACT 60.419 45.455 0.00 0.00 37.17 2.66
5433 5724 3.865164 CACAGAAAAGGCAACCAAACTTC 59.135 43.478 0.00 0.00 37.17 3.01
5435 5726 4.020662 ACAGAAAAGGCAACCAAACTTCAA 60.021 37.500 0.00 0.00 37.17 2.69
5436 5727 4.329801 CAGAAAAGGCAACCAAACTTCAAC 59.670 41.667 0.00 0.00 37.17 3.18
5437 5728 4.222810 AGAAAAGGCAACCAAACTTCAACT 59.777 37.500 0.00 0.00 37.17 3.16
5438 5729 4.551702 AAAGGCAACCAAACTTCAACTT 57.448 36.364 0.00 0.00 37.17 2.66
5439 5730 3.525268 AGGCAACCAAACTTCAACTTG 57.475 42.857 0.00 0.00 37.17 3.16
5440 5731 3.096092 AGGCAACCAAACTTCAACTTGA 58.904 40.909 0.00 0.00 37.17 3.02
5442 5733 4.020662 AGGCAACCAAACTTCAACTTGAAA 60.021 37.500 5.72 0.00 34.09 2.69
5443 5734 4.875536 GGCAACCAAACTTCAACTTGAAAT 59.124 37.500 5.72 0.00 35.73 2.17
5448 5739 6.816136 ACCAAACTTCAACTTGAAATAAGGG 58.184 36.000 5.72 6.53 35.73 3.95
5451 5742 7.984617 CCAAACTTCAACTTGAAATAAGGGAAA 59.015 33.333 5.72 0.00 35.73 3.13
5457 5748 7.125053 TTCAACTTGAAATAAGGGAAACACCTT 59.875 33.333 1.47 2.76 42.43 3.50
5469 5760 2.409948 AACACCTTAGAGATGGCTGC 57.590 50.000 0.00 0.00 0.00 5.25
5479 5770 1.268352 GAGATGGCTGCGAGGTACTAG 59.732 57.143 0.00 0.00 41.55 2.57
5480 5771 1.033574 GATGGCTGCGAGGTACTAGT 58.966 55.000 0.00 0.00 41.55 2.57
5482 5773 0.815734 TGGCTGCGAGGTACTAGTTC 59.184 55.000 0.00 0.00 41.55 3.01
5501 5961 9.449719 ACTAGTTCATATTTAACTTTGGACTGG 57.550 33.333 7.26 6.89 38.18 4.00
5502 5962 9.667107 CTAGTTCATATTTAACTTTGGACTGGA 57.333 33.333 7.26 0.00 38.18 3.86
5503 5963 8.336801 AGTTCATATTTAACTTTGGACTGGAC 57.663 34.615 0.00 0.00 33.39 4.02
5504 5964 7.393515 AGTTCATATTTAACTTTGGACTGGACC 59.606 37.037 0.00 0.00 33.39 4.46
5505 5965 7.027874 TCATATTTAACTTTGGACTGGACCT 57.972 36.000 0.00 0.00 0.00 3.85
5506 5966 6.884295 TCATATTTAACTTTGGACTGGACCTG 59.116 38.462 0.00 0.00 0.00 4.00
5507 5967 3.502123 TTAACTTTGGACTGGACCTGG 57.498 47.619 3.15 0.00 0.00 4.45
5508 5968 1.518367 AACTTTGGACTGGACCTGGA 58.482 50.000 0.00 0.00 0.00 3.86
5509 5969 1.747444 ACTTTGGACTGGACCTGGAT 58.253 50.000 0.00 0.00 0.00 3.41
5510 5970 2.915869 ACTTTGGACTGGACCTGGATA 58.084 47.619 0.00 0.00 0.00 2.59
5511 5971 3.464828 ACTTTGGACTGGACCTGGATAT 58.535 45.455 0.00 0.00 0.00 1.63
5512 5972 3.456277 ACTTTGGACTGGACCTGGATATC 59.544 47.826 0.00 0.00 0.00 1.63
5513 5973 2.103153 TGGACTGGACCTGGATATCC 57.897 55.000 15.39 15.39 35.37 2.59
5514 5974 1.293763 TGGACTGGACCTGGATATCCA 59.706 52.381 23.17 23.17 45.30 3.41
5527 5987 5.715439 TGGATATCCAGTGAAGGTCAAAT 57.285 39.130 20.98 0.00 42.01 2.32
5528 5988 6.078456 TGGATATCCAGTGAAGGTCAAATT 57.922 37.500 20.98 0.00 42.01 1.82
5529 5989 6.493166 TGGATATCCAGTGAAGGTCAAATTT 58.507 36.000 20.98 0.00 42.01 1.82
5530 5990 6.953520 TGGATATCCAGTGAAGGTCAAATTTT 59.046 34.615 20.98 0.00 42.01 1.82
5531 5991 7.454380 TGGATATCCAGTGAAGGTCAAATTTTT 59.546 33.333 20.98 0.00 42.01 1.94
5532 5992 8.966868 GGATATCCAGTGAAGGTCAAATTTTTA 58.033 33.333 17.34 0.00 35.64 1.52
5534 5994 6.648879 TCCAGTGAAGGTCAAATTTTTAGG 57.351 37.500 0.00 0.00 0.00 2.69
5535 5995 5.010617 TCCAGTGAAGGTCAAATTTTTAGGC 59.989 40.000 0.00 0.00 0.00 3.93
5536 5996 5.221422 CCAGTGAAGGTCAAATTTTTAGGCA 60.221 40.000 0.00 0.00 0.00 4.75
5537 5997 6.458210 CAGTGAAGGTCAAATTTTTAGGCAT 58.542 36.000 0.00 0.00 0.00 4.40
5538 5998 6.366877 CAGTGAAGGTCAAATTTTTAGGCATG 59.633 38.462 0.00 0.00 0.00 4.06
5539 5999 5.639082 GTGAAGGTCAAATTTTTAGGCATGG 59.361 40.000 0.00 0.00 0.00 3.66
5540 6000 4.206477 AGGTCAAATTTTTAGGCATGGC 57.794 40.909 12.14 12.14 0.00 4.40
5541 6001 2.929398 GGTCAAATTTTTAGGCATGGCG 59.071 45.455 14.30 0.00 0.00 5.69
5542 6002 3.367910 GGTCAAATTTTTAGGCATGGCGA 60.368 43.478 14.30 5.66 0.00 5.54
5543 6003 4.241681 GTCAAATTTTTAGGCATGGCGAA 58.758 39.130 14.30 12.47 0.00 4.70
5544 6004 4.688413 GTCAAATTTTTAGGCATGGCGAAA 59.312 37.500 20.90 20.90 0.00 3.46
5545 6005 4.688413 TCAAATTTTTAGGCATGGCGAAAC 59.312 37.500 23.74 0.00 0.00 2.78
5546 6006 2.339728 TTTTTAGGCATGGCGAAACG 57.660 45.000 23.74 0.00 0.00 3.60
5547 6007 1.524848 TTTTAGGCATGGCGAAACGA 58.475 45.000 23.74 10.44 0.00 3.85
5548 6008 1.524848 TTTAGGCATGGCGAAACGAA 58.475 45.000 20.90 2.10 0.00 3.85
5549 6009 1.524848 TTAGGCATGGCGAAACGAAA 58.475 45.000 14.30 0.00 0.00 3.46
5550 6010 1.524848 TAGGCATGGCGAAACGAAAA 58.475 45.000 14.30 0.00 0.00 2.29
5551 6011 0.039527 AGGCATGGCGAAACGAAAAC 60.040 50.000 14.30 0.00 0.00 2.43
5552 6012 1.334288 GGCATGGCGAAACGAAAACG 61.334 55.000 2.41 0.00 0.00 3.60
5553 6013 0.384974 GCATGGCGAAACGAAAACGA 60.385 50.000 0.00 0.00 0.00 3.85
5554 6014 1.922444 GCATGGCGAAACGAAAACGAA 60.922 47.619 0.00 0.00 0.00 3.85
5555 6015 2.580589 CATGGCGAAACGAAAACGAAT 58.419 42.857 0.00 0.00 0.00 3.34
5556 6016 2.025544 TGGCGAAACGAAAACGAATG 57.974 45.000 0.00 0.00 0.00 2.67
5557 6017 1.331138 TGGCGAAACGAAAACGAATGT 59.669 42.857 0.00 0.00 0.00 2.71
5558 6018 2.223294 TGGCGAAACGAAAACGAATGTT 60.223 40.909 0.00 0.00 40.98 2.71
5573 6033 7.692908 AACGAATGTTTTTCATGGTAAGTTG 57.307 32.000 0.00 0.00 36.81 3.16
5574 6034 6.801575 ACGAATGTTTTTCATGGTAAGTTGT 58.198 32.000 0.00 0.00 36.81 3.32
5575 6035 6.695278 ACGAATGTTTTTCATGGTAAGTTGTG 59.305 34.615 0.00 0.00 36.81 3.33
5576 6036 6.695278 CGAATGTTTTTCATGGTAAGTTGTGT 59.305 34.615 0.00 0.00 36.81 3.72
5577 6037 7.221838 CGAATGTTTTTCATGGTAAGTTGTGTT 59.778 33.333 0.00 0.00 36.81 3.32
5578 6038 7.769272 ATGTTTTTCATGGTAAGTTGTGTTG 57.231 32.000 0.00 0.00 35.19 3.33
5579 6039 6.102663 TGTTTTTCATGGTAAGTTGTGTTGG 58.897 36.000 0.00 0.00 0.00 3.77
5580 6040 4.314740 TTTCATGGTAAGTTGTGTTGGC 57.685 40.909 0.00 0.00 0.00 4.52
5581 6041 2.235016 TCATGGTAAGTTGTGTTGGCC 58.765 47.619 0.00 0.00 0.00 5.36
5582 6042 1.068610 CATGGTAAGTTGTGTTGGCCG 60.069 52.381 0.00 0.00 0.00 6.13
5583 6043 0.180642 TGGTAAGTTGTGTTGGCCGA 59.819 50.000 0.00 0.00 0.00 5.54
5584 6044 0.872388 GGTAAGTTGTGTTGGCCGAG 59.128 55.000 0.00 0.00 0.00 4.63
5585 6045 0.872388 GTAAGTTGTGTTGGCCGAGG 59.128 55.000 0.00 0.00 0.00 4.63
5586 6046 0.759959 TAAGTTGTGTTGGCCGAGGA 59.240 50.000 0.00 0.00 0.00 3.71
5587 6047 0.110486 AAGTTGTGTTGGCCGAGGAT 59.890 50.000 0.00 0.00 0.00 3.24
5588 6048 0.606401 AGTTGTGTTGGCCGAGGATG 60.606 55.000 0.00 0.00 0.00 3.51
5589 6049 0.605319 GTTGTGTTGGCCGAGGATGA 60.605 55.000 0.00 0.00 0.00 2.92
5590 6050 0.109532 TTGTGTTGGCCGAGGATGAA 59.890 50.000 0.00 0.00 0.00 2.57
5591 6051 0.109532 TGTGTTGGCCGAGGATGAAA 59.890 50.000 0.00 0.00 0.00 2.69
5592 6052 0.804989 GTGTTGGCCGAGGATGAAAG 59.195 55.000 0.00 0.00 0.00 2.62
5593 6053 0.400213 TGTTGGCCGAGGATGAAAGT 59.600 50.000 0.00 0.00 0.00 2.66
5594 6054 1.202879 TGTTGGCCGAGGATGAAAGTT 60.203 47.619 0.00 0.00 0.00 2.66
5595 6055 1.200020 GTTGGCCGAGGATGAAAGTTG 59.800 52.381 0.00 0.00 0.00 3.16
5596 6056 0.322456 TGGCCGAGGATGAAAGTTGG 60.322 55.000 0.00 0.00 0.00 3.77
5597 6057 1.657751 GGCCGAGGATGAAAGTTGGC 61.658 60.000 0.00 0.00 40.25 4.52
5598 6058 1.982073 GCCGAGGATGAAAGTTGGCG 61.982 60.000 0.00 0.00 0.00 5.69
5599 6059 0.391130 CCGAGGATGAAAGTTGGCGA 60.391 55.000 0.00 0.00 0.00 5.54
5600 6060 1.002366 CGAGGATGAAAGTTGGCGAG 58.998 55.000 0.00 0.00 0.00 5.03
5601 6061 0.729690 GAGGATGAAAGTTGGCGAGC 59.270 55.000 0.00 0.00 0.00 5.03
5602 6062 0.036732 AGGATGAAAGTTGGCGAGCA 59.963 50.000 0.00 0.00 0.00 4.26
5603 6063 1.098050 GGATGAAAGTTGGCGAGCAT 58.902 50.000 0.00 0.00 0.00 3.79
5604 6064 1.202222 GGATGAAAGTTGGCGAGCATG 60.202 52.381 0.00 0.00 0.00 4.06
5605 6065 0.813184 ATGAAAGTTGGCGAGCATGG 59.187 50.000 0.00 0.00 0.00 3.66
5606 6066 1.153958 GAAAGTTGGCGAGCATGGC 60.154 57.895 0.00 0.00 40.04 4.40
5607 6067 1.865788 GAAAGTTGGCGAGCATGGCA 61.866 55.000 0.15 0.15 43.90 4.92
5611 6071 2.829914 TGGCGAGCATGGCAATCC 60.830 61.111 1.88 0.00 43.90 3.01
5612 6072 3.957535 GGCGAGCATGGCAATCCG 61.958 66.667 0.00 0.00 43.90 4.18
5613 6073 3.204827 GCGAGCATGGCAATCCGT 61.205 61.111 0.00 0.00 40.68 4.69
5614 6074 3.017323 CGAGCATGGCAATCCGTC 58.983 61.111 0.00 0.00 34.14 4.79
5615 6075 1.522355 CGAGCATGGCAATCCGTCT 60.522 57.895 0.00 0.00 34.14 4.18
5616 6076 1.091771 CGAGCATGGCAATCCGTCTT 61.092 55.000 0.00 0.00 34.14 3.01
5617 6077 1.806247 CGAGCATGGCAATCCGTCTTA 60.806 52.381 0.00 0.00 34.14 2.10
5618 6078 1.869767 GAGCATGGCAATCCGTCTTAG 59.130 52.381 0.00 0.00 34.14 2.18
5619 6079 1.210478 AGCATGGCAATCCGTCTTAGT 59.790 47.619 0.00 0.00 34.14 2.24
5620 6080 2.017049 GCATGGCAATCCGTCTTAGTT 58.983 47.619 0.00 0.00 34.14 2.24
5621 6081 2.032178 GCATGGCAATCCGTCTTAGTTC 59.968 50.000 0.00 0.00 34.14 3.01
5622 6082 3.270027 CATGGCAATCCGTCTTAGTTCA 58.730 45.455 0.00 0.00 34.14 3.18
5623 6083 3.627395 TGGCAATCCGTCTTAGTTCAT 57.373 42.857 0.00 0.00 34.14 2.57
5624 6084 4.746535 TGGCAATCCGTCTTAGTTCATA 57.253 40.909 0.00 0.00 34.14 2.15
5625 6085 5.290493 TGGCAATCCGTCTTAGTTCATAT 57.710 39.130 0.00 0.00 34.14 1.78
5626 6086 5.680619 TGGCAATCCGTCTTAGTTCATATT 58.319 37.500 0.00 0.00 34.14 1.28
5627 6087 6.119536 TGGCAATCCGTCTTAGTTCATATTT 58.880 36.000 0.00 0.00 34.14 1.40
5628 6088 6.601613 TGGCAATCCGTCTTAGTTCATATTTT 59.398 34.615 0.00 0.00 34.14 1.82
5629 6089 7.771361 TGGCAATCCGTCTTAGTTCATATTTTA 59.229 33.333 0.00 0.00 34.14 1.52
5630 6090 8.283291 GGCAATCCGTCTTAGTTCATATTTTAG 58.717 37.037 0.00 0.00 0.00 1.85
5631 6091 7.798982 GCAATCCGTCTTAGTTCATATTTTAGC 59.201 37.037 0.00 0.00 0.00 3.09
5632 6092 7.964604 ATCCGTCTTAGTTCATATTTTAGCC 57.035 36.000 0.00 0.00 0.00 3.93
5633 6093 7.120923 TCCGTCTTAGTTCATATTTTAGCCT 57.879 36.000 0.00 0.00 0.00 4.58
5634 6094 7.562135 TCCGTCTTAGTTCATATTTTAGCCTT 58.438 34.615 0.00 0.00 0.00 4.35
5635 6095 8.044908 TCCGTCTTAGTTCATATTTTAGCCTTT 58.955 33.333 0.00 0.00 0.00 3.11
5636 6096 8.336080 CCGTCTTAGTTCATATTTTAGCCTTTC 58.664 37.037 0.00 0.00 0.00 2.62
5637 6097 8.336080 CGTCTTAGTTCATATTTTAGCCTTTCC 58.664 37.037 0.00 0.00 0.00 3.13
5638 6098 9.174166 GTCTTAGTTCATATTTTAGCCTTTCCA 57.826 33.333 0.00 0.00 0.00 3.53
5639 6099 9.920946 TCTTAGTTCATATTTTAGCCTTTCCAT 57.079 29.630 0.00 0.00 0.00 3.41
5655 6115 6.293407 GCCTTTCCATTAAACTTTTTGAAGCC 60.293 38.462 0.00 0.00 0.00 4.35
5660 6120 5.049474 CCATTAAACTTTTTGAAGCCTTGCC 60.049 40.000 0.00 0.00 0.00 4.52
5672 6132 1.287146 AGCCTTGCCATCTCCAGATTT 59.713 47.619 0.00 0.00 31.21 2.17
5682 6142 3.914426 TCTCCAGATTTAGTTCCAGGC 57.086 47.619 0.00 0.00 0.00 4.85
5703 6163 5.098211 GGCTTGAATTTGTTATCTGCTGTC 58.902 41.667 0.00 0.00 0.00 3.51
5715 6175 2.489971 TCTGCTGTCGAAACCGAATTT 58.510 42.857 0.00 0.00 37.85 1.82
5721 6181 4.679654 GCTGTCGAAACCGAATTTGAATTT 59.320 37.500 0.00 0.00 37.85 1.82
5731 6203 4.090930 CCGAATTTGAATTTGCTGCTGAAG 59.909 41.667 0.00 0.00 0.00 3.02
5748 6220 7.813148 GCTGCTGAAGTAAGAATATACGGATAA 59.187 37.037 0.00 0.00 0.00 1.75
5801 6273 2.382519 GGAACGCGCATAGTAGTACTG 58.617 52.381 13.29 0.00 0.00 2.74
5802 6274 2.223433 GGAACGCGCATAGTAGTACTGT 60.223 50.000 13.29 3.10 0.00 3.55
5803 6275 3.002656 GGAACGCGCATAGTAGTACTGTA 59.997 47.826 13.29 0.00 0.00 2.74
5804 6276 3.599046 ACGCGCATAGTAGTACTGTAC 57.401 47.619 13.29 9.93 0.00 2.90
5805 6277 3.201290 ACGCGCATAGTAGTACTGTACT 58.799 45.455 22.72 22.72 42.68 2.73
5806 6278 3.002042 ACGCGCATAGTAGTACTGTACTG 59.998 47.826 26.45 13.64 39.81 2.74
5807 6279 3.606384 CGCGCATAGTAGTACTGTACTGG 60.606 52.174 26.45 13.39 39.81 4.00
5808 6280 3.562973 GCGCATAGTAGTACTGTACTGGA 59.437 47.826 26.45 13.77 39.81 3.86
5816 6288 7.013823 AGTAGTACTGTACTGGACTCAACTA 57.986 40.000 26.45 0.92 39.81 2.24
5817 6289 6.878389 AGTAGTACTGTACTGGACTCAACTAC 59.122 42.308 26.45 12.61 39.81 2.73
5818 6290 5.878627 AGTACTGTACTGGACTCAACTACT 58.121 41.667 19.09 1.54 37.69 2.57
5820 6292 4.726583 ACTGTACTGGACTCAACTACTCA 58.273 43.478 4.66 0.00 0.00 3.41
5821 6293 5.138276 ACTGTACTGGACTCAACTACTCAA 58.862 41.667 4.66 0.00 0.00 3.02
5844 6316 3.670377 GCCGTGCCCCTGTGTTTC 61.670 66.667 0.00 0.00 0.00 2.78
5845 6317 2.113139 CCGTGCCCCTGTGTTTCT 59.887 61.111 0.00 0.00 0.00 2.52
5846 6318 1.966451 CCGTGCCCCTGTGTTTCTC 60.966 63.158 0.00 0.00 0.00 2.87
5847 6319 1.071471 CGTGCCCCTGTGTTTCTCT 59.929 57.895 0.00 0.00 0.00 3.10
5848 6320 0.951040 CGTGCCCCTGTGTTTCTCTC 60.951 60.000 0.00 0.00 0.00 3.20
5849 6321 0.398318 GTGCCCCTGTGTTTCTCTCT 59.602 55.000 0.00 0.00 0.00 3.10
5850 6322 0.687354 TGCCCCTGTGTTTCTCTCTC 59.313 55.000 0.00 0.00 0.00 3.20
5851 6323 0.390472 GCCCCTGTGTTTCTCTCTCG 60.390 60.000 0.00 0.00 0.00 4.04
5852 6324 0.390472 CCCCTGTGTTTCTCTCTCGC 60.390 60.000 0.00 0.00 0.00 5.03
5853 6325 0.390472 CCCTGTGTTTCTCTCTCGCC 60.390 60.000 0.00 0.00 0.00 5.54
5854 6326 0.734253 CCTGTGTTTCTCTCTCGCCG 60.734 60.000 0.00 0.00 0.00 6.46
5855 6327 0.039074 CTGTGTTTCTCTCTCGCCGT 60.039 55.000 0.00 0.00 0.00 5.68
5856 6328 0.318699 TGTGTTTCTCTCTCGCCGTG 60.319 55.000 0.00 0.00 0.00 4.94
5857 6329 1.372997 TGTTTCTCTCTCGCCGTGC 60.373 57.895 0.00 0.00 0.00 5.34
5858 6330 2.095252 GTTTCTCTCTCGCCGTGCC 61.095 63.158 0.00 0.00 0.00 5.01
5859 6331 3.296709 TTTCTCTCTCGCCGTGCCC 62.297 63.158 0.00 0.00 0.00 5.36
5861 6333 4.069232 CTCTCTCGCCGTGCCCAA 62.069 66.667 0.00 0.00 0.00 4.12
5862 6334 4.373116 TCTCTCGCCGTGCCCAAC 62.373 66.667 0.00 0.00 0.00 3.77
5880 6352 4.123545 CCCCCAACCCCCGTGATC 62.124 72.222 0.00 0.00 0.00 2.92
5881 6353 4.483243 CCCCAACCCCCGTGATCG 62.483 72.222 0.00 0.00 0.00 3.69
5882 6354 3.395702 CCCAACCCCCGTGATCGA 61.396 66.667 0.00 0.00 39.71 3.59
5883 6355 2.742116 CCCAACCCCCGTGATCGAT 61.742 63.158 0.00 0.00 39.71 3.59
5884 6356 1.223487 CCAACCCCCGTGATCGATT 59.777 57.895 0.00 0.00 39.71 3.34
5885 6357 0.814010 CCAACCCCCGTGATCGATTC 60.814 60.000 0.00 0.00 39.71 2.52
5886 6358 0.814010 CAACCCCCGTGATCGATTCC 60.814 60.000 0.00 0.00 39.71 3.01
5887 6359 2.029073 CCCCCGTGATCGATTCCG 59.971 66.667 0.00 4.99 39.71 4.30
5898 6370 2.433868 TCGATTCCGATTCCGATTCC 57.566 50.000 0.00 0.00 40.30 3.01
5899 6371 1.060713 CGATTCCGATTCCGATTCCG 58.939 55.000 0.00 0.00 38.22 4.30
5900 6372 1.602165 CGATTCCGATTCCGATTCCGT 60.602 52.381 0.00 0.00 38.22 4.69
5901 6373 1.792949 GATTCCGATTCCGATTCCGTG 59.207 52.381 0.00 0.00 38.22 4.94
5902 6374 0.808453 TTCCGATTCCGATTCCGTGC 60.808 55.000 0.00 0.00 38.22 5.34
5903 6375 1.520564 CCGATTCCGATTCCGTGCA 60.521 57.895 0.00 0.00 38.22 4.57
5904 6376 1.636340 CGATTCCGATTCCGTGCAC 59.364 57.895 6.82 6.82 38.22 4.57
5905 6377 1.636340 GATTCCGATTCCGTGCACG 59.364 57.895 31.77 31.77 39.44 5.34
5906 6378 2.361427 GATTCCGATTCCGTGCACGC 62.361 60.000 33.17 18.37 38.18 5.34
5933 6405 3.934962 GATCAGCCCCGGGAGCTC 61.935 72.222 27.68 16.53 38.95 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.865834 TGGTTCAAAATACCAGCCAATAAT 57.134 33.333 0.00 0.00 40.65 1.28
25 26 2.541588 CGAACCAAAGTGGCTGTTCTTG 60.542 50.000 0.00 0.00 42.67 3.02
27 28 1.308998 CGAACCAAAGTGGCTGTTCT 58.691 50.000 0.00 0.00 42.67 3.01
28 29 1.002792 GACGAACCAAAGTGGCTGTTC 60.003 52.381 0.00 0.00 42.67 3.18
30 31 0.107410 TGACGAACCAAAGTGGCTGT 60.107 50.000 0.00 0.00 42.67 4.40
31 32 1.238439 ATGACGAACCAAAGTGGCTG 58.762 50.000 0.00 0.00 42.67 4.85
78 82 8.492673 TTCAAATGGTTACTCTGTGATATGTC 57.507 34.615 0.00 0.00 0.00 3.06
121 128 1.068748 CATTCCTGTCAGCACTTGTGC 60.069 52.381 16.98 16.98 0.00 4.57
232 247 1.268032 CGAACTGACTGTGTTTGCCAC 60.268 52.381 0.00 0.00 44.78 5.01
233 248 1.013596 CGAACTGACTGTGTTTGCCA 58.986 50.000 0.00 0.00 0.00 4.92
274 291 3.257393 GTTGCTCATCACATTCGTCTCT 58.743 45.455 0.00 0.00 0.00 3.10
366 383 2.182030 GACTTCGAGCAGGACCCG 59.818 66.667 0.00 0.00 0.00 5.28
456 473 0.740868 TCGATTTCTTGGGCGCAGAG 60.741 55.000 10.83 3.34 0.00 3.35
478 495 1.112950 CTAGTTCCTCTCGGTTCCCC 58.887 60.000 0.00 0.00 0.00 4.81
509 526 1.202417 TCTCACCCGATTTCTGCGATC 60.202 52.381 0.00 0.00 0.00 3.69
514 531 1.303309 GCCATCTCACCCGATTTCTG 58.697 55.000 0.00 0.00 0.00 3.02
521 538 4.864334 GCCCTGCCATCTCACCCG 62.864 72.222 0.00 0.00 0.00 5.28
523 540 1.449353 CTAGCCCTGCCATCTCACC 59.551 63.158 0.00 0.00 0.00 4.02
540 557 1.407979 ACTCGTCTTGTTGTCGTTCCT 59.592 47.619 0.00 0.00 0.00 3.36
547 564 2.291465 TGCGTACTACTCGTCTTGTTGT 59.709 45.455 0.00 0.00 0.00 3.32
548 565 2.909244 CTGCGTACTACTCGTCTTGTTG 59.091 50.000 0.00 0.00 0.00 3.33
549 566 2.095364 CCTGCGTACTACTCGTCTTGTT 60.095 50.000 0.00 0.00 0.00 2.83
550 567 1.467734 CCTGCGTACTACTCGTCTTGT 59.532 52.381 0.00 0.00 0.00 3.16
551 568 1.736126 TCCTGCGTACTACTCGTCTTG 59.264 52.381 0.00 0.00 0.00 3.02
556 573 2.008329 ACTTCTCCTGCGTACTACTCG 58.992 52.381 0.00 0.00 0.00 4.18
558 575 1.473278 GCACTTCTCCTGCGTACTACT 59.527 52.381 0.00 0.00 0.00 2.57
667 698 2.435586 TCGTCTCGTCTCCCGTCC 60.436 66.667 0.00 0.00 37.94 4.79
699 730 3.155861 TTCACCACCGTCCCGTGT 61.156 61.111 0.00 0.00 31.47 4.49
701 732 2.841044 AGTTCACCACCGTCCCGT 60.841 61.111 0.00 0.00 0.00 5.28
702 733 2.357034 CAGTTCACCACCGTCCCG 60.357 66.667 0.00 0.00 0.00 5.14
703 734 2.032071 CCAGTTCACCACCGTCCC 59.968 66.667 0.00 0.00 0.00 4.46
704 735 1.597027 CACCAGTTCACCACCGTCC 60.597 63.158 0.00 0.00 0.00 4.79
708 739 0.609131 CCCATCACCAGTTCACCACC 60.609 60.000 0.00 0.00 0.00 4.61
709 740 1.244019 GCCCATCACCAGTTCACCAC 61.244 60.000 0.00 0.00 0.00 4.16
746 787 0.802607 GCTCGTGGACGGTTCAGATC 60.803 60.000 0.00 0.00 40.29 2.75
790 831 2.557452 GGTGATGGTGAAAAGACCCCAT 60.557 50.000 0.00 0.00 40.34 4.00
798 839 0.037590 CGAGGGGGTGATGGTGAAAA 59.962 55.000 0.00 0.00 0.00 2.29
804 845 1.264749 TTCTGTCGAGGGGGTGATGG 61.265 60.000 0.00 0.00 0.00 3.51
806 847 1.265454 GGTTCTGTCGAGGGGGTGAT 61.265 60.000 0.00 0.00 0.00 3.06
873 917 2.289072 GCTTTGCTTCCCCTCTTTTTCC 60.289 50.000 0.00 0.00 0.00 3.13
1326 1392 1.766143 GCGCCAGCGGATCTAAACAG 61.766 60.000 14.63 0.00 40.19 3.16
1328 1394 3.014856 GCGCCAGCGGATCTAAAC 58.985 61.111 14.63 0.00 40.19 2.01
1577 1654 5.220548 CCGAAACAGCTCATCAGTATTCAAG 60.221 44.000 0.00 0.00 0.00 3.02
1779 1861 8.875803 CAACATTGGTACGTATGTATAAGTTGT 58.124 33.333 10.71 0.00 35.64 3.32
1836 1918 6.817184 TGGTAAATACTTCATAGAGACAGCC 58.183 40.000 0.00 0.00 0.00 4.85
1868 1950 5.940470 AGCAACTGAACCCAAACTAGATTAG 59.060 40.000 0.00 0.00 0.00 1.73
1924 2006 2.487934 CACAGGCGATATTTCTCCAGG 58.512 52.381 0.00 0.00 0.00 4.45
2056 2181 2.692041 AGCTATGCATTTTGGGAGCTTC 59.308 45.455 12.59 0.00 36.93 3.86
2102 2227 1.556911 CCCATTGCTCTGGACAGTAGT 59.443 52.381 6.69 0.00 38.69 2.73
2152 2277 7.833682 ACACCATATATCAGGACATCTAGAGAG 59.166 40.741 0.00 0.00 0.00 3.20
2156 2281 9.249053 ACTAACACCATATATCAGGACATCTAG 57.751 37.037 0.65 0.00 0.00 2.43
2207 2332 2.568956 AGGCTGACTGTTCTCTGCAATA 59.431 45.455 0.00 0.00 36.97 1.90
2211 2336 2.838286 CAGGCTGACTGTTCTCTGC 58.162 57.895 9.42 0.00 42.42 4.26
2289 2415 8.816640 AGCAAACAAGTTGATTAAACATTAGG 57.183 30.769 10.54 0.00 41.61 2.69
2319 2445 3.069586 TCACTGAAGTCATGAGTCGGTTT 59.930 43.478 15.23 0.00 0.00 3.27
2320 2446 2.628178 TCACTGAAGTCATGAGTCGGTT 59.372 45.455 15.23 0.00 0.00 4.44
2321 2447 2.230025 CTCACTGAAGTCATGAGTCGGT 59.770 50.000 12.96 12.96 36.02 4.69
2407 2533 1.235724 AAGGGTAGTGAACGCAAAGC 58.764 50.000 0.00 0.00 43.32 3.51
2446 2572 0.110295 CAGTCCCCACCATCAACACA 59.890 55.000 0.00 0.00 0.00 3.72
2492 2619 4.993028 ACATTAGTTTAGAAGGGTGGCAA 58.007 39.130 0.00 0.00 0.00 4.52
2545 2672 3.621715 CGCCTAACAAGGGAATACAAGAC 59.378 47.826 0.00 0.00 0.00 3.01
2600 2728 4.635765 GGAACATAGCTGCACAATGTAAGA 59.364 41.667 13.32 0.00 33.59 2.10
2601 2729 4.637534 AGGAACATAGCTGCACAATGTAAG 59.362 41.667 13.32 0.00 33.59 2.34
2821 2949 0.107643 TTTCTGATGGCACGTGGACA 59.892 50.000 18.88 6.85 40.35 4.02
2967 3095 5.591099 TGATTTCTTGCAGAAAAAGTGACC 58.409 37.500 13.04 2.24 46.08 4.02
2969 3097 7.267128 ACATTGATTTCTTGCAGAAAAAGTGA 58.733 30.769 13.04 2.72 46.08 3.41
2970 3098 7.473027 ACATTGATTTCTTGCAGAAAAAGTG 57.527 32.000 13.04 12.83 46.08 3.16
2971 3099 7.765360 TGAACATTGATTTCTTGCAGAAAAAGT 59.235 29.630 13.04 6.98 46.08 2.66
2972 3100 8.133754 TGAACATTGATTTCTTGCAGAAAAAG 57.866 30.769 13.04 0.00 46.08 2.27
2973 3101 7.225145 CCTGAACATTGATTTCTTGCAGAAAAA 59.775 33.333 13.04 4.57 46.08 1.94
2974 3102 6.702723 CCTGAACATTGATTTCTTGCAGAAAA 59.297 34.615 13.04 6.71 46.08 2.29
3027 3155 5.308237 CCTATTTATTCCCTACTCAGCACCT 59.692 44.000 0.00 0.00 0.00 4.00
3052 3180 3.689161 CAGCCGATTAACTGGAACATTCA 59.311 43.478 0.00 0.00 38.20 2.57
3057 3185 6.564125 CGATTTATCAGCCGATTAACTGGAAC 60.564 42.308 0.00 0.00 34.57 3.62
3063 3191 5.668558 AACCGATTTATCAGCCGATTAAC 57.331 39.130 0.00 0.00 32.73 2.01
3064 3192 7.148705 CGATTAACCGATTTATCAGCCGATTAA 60.149 37.037 0.00 0.00 32.73 1.40
3065 3193 6.309494 CGATTAACCGATTTATCAGCCGATTA 59.691 38.462 0.00 0.00 32.73 1.75
3066 3194 5.120208 CGATTAACCGATTTATCAGCCGATT 59.880 40.000 0.00 0.00 32.73 3.34
3067 3195 4.625742 CGATTAACCGATTTATCAGCCGAT 59.374 41.667 0.00 0.00 35.50 4.18
3068 3196 3.985279 CGATTAACCGATTTATCAGCCGA 59.015 43.478 0.00 0.00 0.00 5.54
3069 3197 3.122948 CCGATTAACCGATTTATCAGCCG 59.877 47.826 0.00 0.00 0.00 5.52
3070 3198 3.120304 GCCGATTAACCGATTTATCAGCC 60.120 47.826 0.00 0.00 0.00 4.85
3071 3199 3.746492 AGCCGATTAACCGATTTATCAGC 59.254 43.478 0.00 0.00 0.00 4.26
3072 3200 7.462856 CGAATAGCCGATTAACCGATTTATCAG 60.463 40.741 0.00 0.00 0.00 2.90
3073 3201 6.309494 CGAATAGCCGATTAACCGATTTATCA 59.691 38.462 0.00 0.00 0.00 2.15
3074 3202 6.237755 CCGAATAGCCGATTAACCGATTTATC 60.238 42.308 0.00 0.00 0.00 1.75
3075 3203 5.579511 CCGAATAGCCGATTAACCGATTTAT 59.420 40.000 0.00 0.00 0.00 1.40
3076 3204 4.925054 CCGAATAGCCGATTAACCGATTTA 59.075 41.667 0.00 0.00 0.00 1.40
3077 3205 3.744426 CCGAATAGCCGATTAACCGATTT 59.256 43.478 0.00 0.00 0.00 2.17
3078 3206 3.243975 ACCGAATAGCCGATTAACCGATT 60.244 43.478 0.00 0.00 0.00 3.34
3079 3207 2.298163 ACCGAATAGCCGATTAACCGAT 59.702 45.455 0.00 0.00 0.00 4.18
3080 3208 1.682854 ACCGAATAGCCGATTAACCGA 59.317 47.619 0.00 0.00 0.00 4.69
3081 3209 1.790623 CACCGAATAGCCGATTAACCG 59.209 52.381 0.00 0.00 0.00 4.44
3082 3210 2.798847 GTCACCGAATAGCCGATTAACC 59.201 50.000 0.00 0.00 0.00 2.85
3119 3247 0.179100 ATCGGCATCTCGGTCAGTTG 60.179 55.000 0.00 0.00 0.00 3.16
3323 3451 1.812571 CTGCAAACTGTATCCACCCAC 59.187 52.381 0.00 0.00 0.00 4.61
3368 3496 1.399791 GCTTGCTGCTGACCTACATTC 59.600 52.381 0.00 0.00 38.95 2.67
3547 3768 7.459486 CAGAAGAAAAGATCGAATGTAACTGG 58.541 38.462 0.00 0.00 0.00 4.00
3548 3769 6.958193 GCAGAAGAAAAGATCGAATGTAACTG 59.042 38.462 0.00 0.00 0.00 3.16
3789 4011 7.670364 AGGAAAAACATCCATCACTAAAAAGG 58.330 34.615 0.00 0.00 42.27 3.11
3798 4020 8.966868 GTAATTCCTAAGGAAAAACATCCATCA 58.033 33.333 0.00 0.00 45.41 3.07
3824 4046 3.117794 CACTGGTTGCACAACTTTCATG 58.882 45.455 12.87 0.00 40.94 3.07
3877 4099 4.503296 CCTGTACAAGGTTAAGCACTGAGT 60.503 45.833 7.52 0.76 41.74 3.41
4000 4225 0.657312 TTTTCATCTAGGCATGCGCG 59.343 50.000 12.44 0.00 39.92 6.86
4041 4266 8.842358 TTTAATTAGATGTGGACGAGTTTTCT 57.158 30.769 0.00 0.00 0.00 2.52
4057 4282 9.461312 TTGCTAAGCTTCCTTCATTTAATTAGA 57.539 29.630 0.00 0.00 32.47 2.10
4109 4337 1.599797 GTACACGCACCAAGGCCTT 60.600 57.895 13.78 13.78 0.00 4.35
4117 4345 1.946267 CACCCTTTGTACACGCACC 59.054 57.895 0.00 0.00 0.00 5.01
4150 4421 2.167662 CCCCCAACCAAAGTGATGTAC 58.832 52.381 0.00 0.00 0.00 2.90
4184 4456 6.849085 ACATAAAGCATGATTTAACCACCA 57.151 33.333 19.15 0.00 38.10 4.17
4206 4478 4.365723 TGAGGACAGAAAAACAGACGTAC 58.634 43.478 0.00 0.00 0.00 3.67
4375 4647 8.869109 ACAGAATTTGGGATGAATTTTGAACTA 58.131 29.630 6.98 0.00 34.22 2.24
4392 4664 5.848036 CGAACTGCTTCAGTAACAGAATTTG 59.152 40.000 0.00 0.00 44.62 2.32
4416 4689 6.449698 ACAACACTCCATGAATGAAAATGTC 58.550 36.000 0.00 0.00 0.00 3.06
4464 4737 3.864003 GGAGCAGATTAAACACGTCCTAC 59.136 47.826 0.00 0.00 0.00 3.18
4465 4738 3.118884 GGGAGCAGATTAAACACGTCCTA 60.119 47.826 0.00 0.00 0.00 2.94
4470 4744 2.107950 TGGGGAGCAGATTAAACACG 57.892 50.000 0.00 0.00 0.00 4.49
4728 5002 3.396260 ACAGCTTAAACTAGCCGACAA 57.604 42.857 0.00 0.00 42.20 3.18
4733 5007 2.159382 TGGCAACAGCTTAAACTAGCC 58.841 47.619 8.46 8.46 46.17 3.93
4762 5036 3.270877 AGACACCAATATCGCCAAAGAC 58.729 45.455 0.00 0.00 0.00 3.01
4765 5039 3.680490 TGAAGACACCAATATCGCCAAA 58.320 40.909 0.00 0.00 0.00 3.28
4768 5042 3.206150 ACATGAAGACACCAATATCGCC 58.794 45.455 0.00 0.00 0.00 5.54
4771 5045 7.798596 AGATCAACATGAAGACACCAATATC 57.201 36.000 0.00 0.00 0.00 1.63
4815 5094 7.862873 ACACTAGAAGTAAAATTTGCAGAAAGC 59.137 33.333 0.00 0.00 45.96 3.51
5261 5541 0.888619 TGTAACTCTGAGCCTGACGG 59.111 55.000 4.19 0.00 0.00 4.79
5282 5563 5.962433 ACGAAATCGATTCTAGTCCAAAGA 58.038 37.500 11.83 0.00 43.02 2.52
5290 5571 7.972623 ACTTTACTGACGAAATCGATTCTAG 57.027 36.000 11.83 8.35 43.02 2.43
5291 5572 8.752766 AAACTTTACTGACGAAATCGATTCTA 57.247 30.769 11.83 0.00 43.02 2.10
5292 5573 7.653767 AAACTTTACTGACGAAATCGATTCT 57.346 32.000 11.83 1.78 43.02 2.40
5293 5574 8.007716 TCAAAACTTTACTGACGAAATCGATTC 58.992 33.333 11.83 4.45 43.02 2.52
5294 5575 7.797123 GTCAAAACTTTACTGACGAAATCGATT 59.203 33.333 10.16 4.39 43.02 3.34
5295 5576 7.042321 TGTCAAAACTTTACTGACGAAATCGAT 60.042 33.333 10.16 0.00 41.94 3.59
5304 5595 7.078228 CCAAGCTATGTCAAAACTTTACTGAC 58.922 38.462 0.00 0.00 39.93 3.51
5306 5597 6.970484 ACCAAGCTATGTCAAAACTTTACTG 58.030 36.000 0.00 0.00 0.00 2.74
5307 5598 7.937394 AGTACCAAGCTATGTCAAAACTTTACT 59.063 33.333 0.00 0.00 0.00 2.24
5313 5604 4.760204 ACCAGTACCAAGCTATGTCAAAAC 59.240 41.667 0.00 0.00 0.00 2.43
5335 5626 1.143969 CCGGTGTTCGATCGCCTTAC 61.144 60.000 20.72 6.65 42.43 2.34
5342 5633 0.801067 CTTCCGTCCGGTGTTCGATC 60.801 60.000 0.00 0.00 42.43 3.69
5346 5637 1.475682 ACTATCTTCCGTCCGGTGTTC 59.524 52.381 0.00 0.00 36.47 3.18
5353 5644 5.298777 ACTGTACATGTACTATCTTCCGTCC 59.701 44.000 30.69 6.04 37.00 4.79
5354 5645 6.374565 ACTGTACATGTACTATCTTCCGTC 57.625 41.667 30.69 6.22 37.00 4.79
5363 5654 8.501580 GCAGTCGATATAACTGTACATGTACTA 58.498 37.037 30.69 18.47 44.79 1.82
5364 5655 7.361127 GCAGTCGATATAACTGTACATGTACT 58.639 38.462 30.69 17.06 44.79 2.73
5369 5660 4.021368 GGGGCAGTCGATATAACTGTACAT 60.021 45.833 15.53 0.00 44.79 2.29
5409 5700 0.463620 TTGGTTGCCTTTTCTGTGCC 59.536 50.000 0.00 0.00 0.00 5.01
5429 5720 7.417456 GGTGTTTCCCTTATTTCAAGTTGAAGT 60.417 37.037 17.36 16.99 37.70 3.01
5430 5721 6.923508 GGTGTTTCCCTTATTTCAAGTTGAAG 59.076 38.462 17.36 6.83 37.70 3.02
5431 5722 6.609616 AGGTGTTTCCCTTATTTCAAGTTGAA 59.390 34.615 14.35 14.35 36.75 2.69
5433 5724 6.405278 AGGTGTTTCCCTTATTTCAAGTTG 57.595 37.500 0.00 0.00 36.75 3.16
5435 5726 7.523415 TCTAAGGTGTTTCCCTTATTTCAAGT 58.477 34.615 0.44 0.00 44.15 3.16
5436 5727 7.883311 TCTCTAAGGTGTTTCCCTTATTTCAAG 59.117 37.037 0.44 0.00 44.15 3.02
5437 5728 7.751646 TCTCTAAGGTGTTTCCCTTATTTCAA 58.248 34.615 0.44 0.00 44.15 2.69
5438 5729 7.324388 TCTCTAAGGTGTTTCCCTTATTTCA 57.676 36.000 0.44 0.00 44.15 2.69
5439 5730 7.283354 CCATCTCTAAGGTGTTTCCCTTATTTC 59.717 40.741 0.44 0.00 44.15 2.17
5440 5731 7.119387 CCATCTCTAAGGTGTTTCCCTTATTT 58.881 38.462 0.44 0.00 44.15 1.40
5442 5733 5.398012 GCCATCTCTAAGGTGTTTCCCTTAT 60.398 44.000 0.44 0.00 44.15 1.73
5443 5734 4.080526 GCCATCTCTAAGGTGTTTCCCTTA 60.081 45.833 0.00 0.00 43.09 2.69
5448 5739 2.680339 GCAGCCATCTCTAAGGTGTTTC 59.320 50.000 0.00 0.00 0.00 2.78
5451 5742 0.176680 CGCAGCCATCTCTAAGGTGT 59.823 55.000 0.00 0.00 0.00 4.16
5457 5748 1.133761 AGTACCTCGCAGCCATCTCTA 60.134 52.381 0.00 0.00 0.00 2.43
5459 5750 1.268352 CTAGTACCTCGCAGCCATCTC 59.732 57.143 0.00 0.00 0.00 2.75
5479 5770 7.393515 AGGTCCAGTCCAAAGTTAAATATGAAC 59.606 37.037 0.00 0.00 0.00 3.18
5480 5771 7.393234 CAGGTCCAGTCCAAAGTTAAATATGAA 59.607 37.037 0.00 0.00 0.00 2.57
5482 5773 6.095440 CCAGGTCCAGTCCAAAGTTAAATATG 59.905 42.308 0.00 0.00 0.00 1.78
5495 5955 2.103153 TGGATATCCAGGTCCAGTCC 57.897 55.000 20.98 0.00 42.01 3.85
5505 5965 5.715439 ATTTGACCTTCACTGGATATCCA 57.285 39.130 23.17 23.17 45.30 3.41
5506 5966 7.410120 AAAATTTGACCTTCACTGGATATCC 57.590 36.000 15.39 15.39 0.00 2.59
5508 5968 8.971073 CCTAAAAATTTGACCTTCACTGGATAT 58.029 33.333 0.00 0.00 0.00 1.63
5509 5969 7.093945 GCCTAAAAATTTGACCTTCACTGGATA 60.094 37.037 0.00 0.00 0.00 2.59
5510 5970 6.295292 GCCTAAAAATTTGACCTTCACTGGAT 60.295 38.462 0.00 0.00 0.00 3.41
5511 5971 5.010617 GCCTAAAAATTTGACCTTCACTGGA 59.989 40.000 0.00 0.00 0.00 3.86
5512 5972 5.221422 TGCCTAAAAATTTGACCTTCACTGG 60.221 40.000 0.00 0.00 0.00 4.00
5513 5973 5.841810 TGCCTAAAAATTTGACCTTCACTG 58.158 37.500 0.00 0.00 0.00 3.66
5514 5974 6.458210 CATGCCTAAAAATTTGACCTTCACT 58.542 36.000 0.00 0.00 0.00 3.41
5515 5975 5.639082 CCATGCCTAAAAATTTGACCTTCAC 59.361 40.000 0.00 0.00 0.00 3.18
5516 5976 5.792741 CCATGCCTAAAAATTTGACCTTCA 58.207 37.500 0.00 0.00 0.00 3.02
5517 5977 4.631377 GCCATGCCTAAAAATTTGACCTTC 59.369 41.667 0.00 0.00 0.00 3.46
5518 5978 4.578871 GCCATGCCTAAAAATTTGACCTT 58.421 39.130 0.00 0.00 0.00 3.50
5519 5979 3.368323 CGCCATGCCTAAAAATTTGACCT 60.368 43.478 0.00 0.00 0.00 3.85
5520 5980 2.929398 CGCCATGCCTAAAAATTTGACC 59.071 45.455 0.00 0.00 0.00 4.02
5521 5981 3.843999 TCGCCATGCCTAAAAATTTGAC 58.156 40.909 0.00 0.00 0.00 3.18
5522 5982 4.527509 TTCGCCATGCCTAAAAATTTGA 57.472 36.364 0.00 0.00 0.00 2.69
5523 5983 4.434067 CGTTTCGCCATGCCTAAAAATTTG 60.434 41.667 0.00 0.00 0.00 2.32
5524 5984 3.677596 CGTTTCGCCATGCCTAAAAATTT 59.322 39.130 0.00 0.00 0.00 1.82
5525 5985 3.057174 TCGTTTCGCCATGCCTAAAAATT 60.057 39.130 0.00 0.00 0.00 1.82
5526 5986 2.490115 TCGTTTCGCCATGCCTAAAAAT 59.510 40.909 0.00 0.00 0.00 1.82
5527 5987 1.880675 TCGTTTCGCCATGCCTAAAAA 59.119 42.857 0.00 0.00 0.00 1.94
5528 5988 1.524848 TCGTTTCGCCATGCCTAAAA 58.475 45.000 0.00 0.00 0.00 1.52
5529 5989 1.524848 TTCGTTTCGCCATGCCTAAA 58.475 45.000 0.00 0.00 0.00 1.85
5530 5990 1.524848 TTTCGTTTCGCCATGCCTAA 58.475 45.000 0.00 0.00 0.00 2.69
5531 5991 1.198178 GTTTTCGTTTCGCCATGCCTA 59.802 47.619 0.00 0.00 0.00 3.93
5532 5992 0.039527 GTTTTCGTTTCGCCATGCCT 60.040 50.000 0.00 0.00 0.00 4.75
5533 5993 1.334288 CGTTTTCGTTTCGCCATGCC 61.334 55.000 0.00 0.00 38.65 4.40
5534 5994 0.384974 TCGTTTTCGTTTCGCCATGC 60.385 50.000 0.00 0.00 44.46 4.06
5535 5995 2.025544 TTCGTTTTCGTTTCGCCATG 57.974 45.000 0.00 0.00 44.46 3.66
5536 5996 2.031508 ACATTCGTTTTCGTTTCGCCAT 60.032 40.909 0.00 0.00 44.46 4.40
5537 5997 1.331138 ACATTCGTTTTCGTTTCGCCA 59.669 42.857 0.00 0.00 44.46 5.69
5538 5998 2.026915 ACATTCGTTTTCGTTTCGCC 57.973 45.000 0.00 0.00 44.46 5.54
5549 6009 7.221838 CACAACTTACCATGAAAAACATTCGTT 59.778 33.333 0.00 0.00 37.07 3.85
5550 6010 6.695278 CACAACTTACCATGAAAAACATTCGT 59.305 34.615 0.00 0.00 37.07 3.85
5551 6011 6.695278 ACACAACTTACCATGAAAAACATTCG 59.305 34.615 0.00 0.00 37.07 3.34
5552 6012 8.327429 CAACACAACTTACCATGAAAAACATTC 58.673 33.333 0.00 0.00 37.07 2.67
5553 6013 7.279758 CCAACACAACTTACCATGAAAAACATT 59.720 33.333 0.00 0.00 37.07 2.71
5554 6014 6.760770 CCAACACAACTTACCATGAAAAACAT 59.239 34.615 0.00 0.00 40.17 2.71
5555 6015 6.102663 CCAACACAACTTACCATGAAAAACA 58.897 36.000 0.00 0.00 0.00 2.83
5556 6016 5.006261 GCCAACACAACTTACCATGAAAAAC 59.994 40.000 0.00 0.00 0.00 2.43
5557 6017 5.112686 GCCAACACAACTTACCATGAAAAA 58.887 37.500 0.00 0.00 0.00 1.94
5558 6018 4.442192 GGCCAACACAACTTACCATGAAAA 60.442 41.667 0.00 0.00 0.00 2.29
5559 6019 3.068873 GGCCAACACAACTTACCATGAAA 59.931 43.478 0.00 0.00 0.00 2.69
5560 6020 2.625790 GGCCAACACAACTTACCATGAA 59.374 45.455 0.00 0.00 0.00 2.57
5561 6021 2.235016 GGCCAACACAACTTACCATGA 58.765 47.619 0.00 0.00 0.00 3.07
5562 6022 1.068610 CGGCCAACACAACTTACCATG 60.069 52.381 2.24 0.00 0.00 3.66
5563 6023 1.202830 TCGGCCAACACAACTTACCAT 60.203 47.619 2.24 0.00 0.00 3.55
5564 6024 0.180642 TCGGCCAACACAACTTACCA 59.819 50.000 2.24 0.00 0.00 3.25
5565 6025 0.872388 CTCGGCCAACACAACTTACC 59.128 55.000 2.24 0.00 0.00 2.85
5566 6026 0.872388 CCTCGGCCAACACAACTTAC 59.128 55.000 2.24 0.00 0.00 2.34
5567 6027 0.759959 TCCTCGGCCAACACAACTTA 59.240 50.000 2.24 0.00 0.00 2.24
5568 6028 0.110486 ATCCTCGGCCAACACAACTT 59.890 50.000 2.24 0.00 0.00 2.66
5569 6029 0.606401 CATCCTCGGCCAACACAACT 60.606 55.000 2.24 0.00 0.00 3.16
5570 6030 0.605319 TCATCCTCGGCCAACACAAC 60.605 55.000 2.24 0.00 0.00 3.32
5571 6031 0.109532 TTCATCCTCGGCCAACACAA 59.890 50.000 2.24 0.00 0.00 3.33
5572 6032 0.109532 TTTCATCCTCGGCCAACACA 59.890 50.000 2.24 0.00 0.00 3.72
5573 6033 0.804989 CTTTCATCCTCGGCCAACAC 59.195 55.000 2.24 0.00 0.00 3.32
5574 6034 0.400213 ACTTTCATCCTCGGCCAACA 59.600 50.000 2.24 0.00 0.00 3.33
5575 6035 1.200020 CAACTTTCATCCTCGGCCAAC 59.800 52.381 2.24 0.00 0.00 3.77
5576 6036 1.533625 CAACTTTCATCCTCGGCCAA 58.466 50.000 2.24 0.00 0.00 4.52
5577 6037 0.322456 CCAACTTTCATCCTCGGCCA 60.322 55.000 2.24 0.00 0.00 5.36
5578 6038 1.657751 GCCAACTTTCATCCTCGGCC 61.658 60.000 0.00 0.00 31.76 6.13
5579 6039 1.803289 GCCAACTTTCATCCTCGGC 59.197 57.895 0.00 0.00 0.00 5.54
5580 6040 0.391130 TCGCCAACTTTCATCCTCGG 60.391 55.000 0.00 0.00 0.00 4.63
5581 6041 1.002366 CTCGCCAACTTTCATCCTCG 58.998 55.000 0.00 0.00 0.00 4.63
5582 6042 0.729690 GCTCGCCAACTTTCATCCTC 59.270 55.000 0.00 0.00 0.00 3.71
5583 6043 0.036732 TGCTCGCCAACTTTCATCCT 59.963 50.000 0.00 0.00 0.00 3.24
5584 6044 1.098050 ATGCTCGCCAACTTTCATCC 58.902 50.000 0.00 0.00 0.00 3.51
5585 6045 1.202222 CCATGCTCGCCAACTTTCATC 60.202 52.381 0.00 0.00 0.00 2.92
5586 6046 0.813184 CCATGCTCGCCAACTTTCAT 59.187 50.000 0.00 0.00 0.00 2.57
5587 6047 1.865788 GCCATGCTCGCCAACTTTCA 61.866 55.000 0.00 0.00 0.00 2.69
5588 6048 1.153958 GCCATGCTCGCCAACTTTC 60.154 57.895 0.00 0.00 0.00 2.62
5589 6049 1.462731 TTGCCATGCTCGCCAACTTT 61.463 50.000 0.00 0.00 0.00 2.66
5590 6050 1.252904 ATTGCCATGCTCGCCAACTT 61.253 50.000 0.00 0.00 0.00 2.66
5591 6051 1.660560 GATTGCCATGCTCGCCAACT 61.661 55.000 0.00 0.00 0.00 3.16
5592 6052 1.226773 GATTGCCATGCTCGCCAAC 60.227 57.895 0.00 0.00 0.00 3.77
5593 6053 2.417257 GGATTGCCATGCTCGCCAA 61.417 57.895 0.00 0.00 0.00 4.52
5594 6054 2.829914 GGATTGCCATGCTCGCCA 60.830 61.111 0.00 0.00 0.00 5.69
5595 6055 3.957535 CGGATTGCCATGCTCGCC 61.958 66.667 0.00 0.00 0.00 5.54
5596 6056 3.173390 GACGGATTGCCATGCTCGC 62.173 63.158 0.00 0.00 0.00 5.03
5597 6057 1.091771 AAGACGGATTGCCATGCTCG 61.092 55.000 0.00 0.00 0.00 5.03
5598 6058 1.869767 CTAAGACGGATTGCCATGCTC 59.130 52.381 0.00 0.00 0.00 4.26
5599 6059 1.210478 ACTAAGACGGATTGCCATGCT 59.790 47.619 0.00 0.00 0.00 3.79
5600 6060 1.668419 ACTAAGACGGATTGCCATGC 58.332 50.000 0.00 0.00 0.00 4.06
5601 6061 3.270027 TGAACTAAGACGGATTGCCATG 58.730 45.455 0.00 0.00 0.00 3.66
5602 6062 3.627395 TGAACTAAGACGGATTGCCAT 57.373 42.857 0.00 0.00 0.00 4.40
5603 6063 3.627395 ATGAACTAAGACGGATTGCCA 57.373 42.857 0.00 0.00 0.00 4.92
5604 6064 6.619801 AAATATGAACTAAGACGGATTGCC 57.380 37.500 0.00 0.00 0.00 4.52
5605 6065 7.798982 GCTAAAATATGAACTAAGACGGATTGC 59.201 37.037 0.00 0.00 0.00 3.56
5606 6066 8.283291 GGCTAAAATATGAACTAAGACGGATTG 58.717 37.037 0.00 0.00 0.00 2.67
5607 6067 8.211629 AGGCTAAAATATGAACTAAGACGGATT 58.788 33.333 0.00 0.00 0.00 3.01
5608 6068 7.736893 AGGCTAAAATATGAACTAAGACGGAT 58.263 34.615 0.00 0.00 0.00 4.18
5609 6069 7.120923 AGGCTAAAATATGAACTAAGACGGA 57.879 36.000 0.00 0.00 0.00 4.69
5610 6070 7.787725 AAGGCTAAAATATGAACTAAGACGG 57.212 36.000 0.00 0.00 0.00 4.79
5611 6071 8.336080 GGAAAGGCTAAAATATGAACTAAGACG 58.664 37.037 0.00 0.00 0.00 4.18
5612 6072 9.174166 TGGAAAGGCTAAAATATGAACTAAGAC 57.826 33.333 0.00 0.00 0.00 3.01
5613 6073 9.920946 ATGGAAAGGCTAAAATATGAACTAAGA 57.079 29.630 0.00 0.00 0.00 2.10
5625 6085 9.892130 TCAAAAAGTTTAATGGAAAGGCTAAAA 57.108 25.926 0.00 0.00 0.00 1.52
5626 6086 9.892130 TTCAAAAAGTTTAATGGAAAGGCTAAA 57.108 25.926 0.00 0.00 0.00 1.85
5627 6087 9.541143 CTTCAAAAAGTTTAATGGAAAGGCTAA 57.459 29.630 0.00 0.00 0.00 3.09
5628 6088 7.655732 GCTTCAAAAAGTTTAATGGAAAGGCTA 59.344 33.333 0.00 0.00 34.79 3.93
5629 6089 6.483307 GCTTCAAAAAGTTTAATGGAAAGGCT 59.517 34.615 0.00 0.00 34.79 4.58
5630 6090 6.293407 GGCTTCAAAAAGTTTAATGGAAAGGC 60.293 38.462 10.60 10.60 34.79 4.35
5631 6091 6.992123 AGGCTTCAAAAAGTTTAATGGAAAGG 59.008 34.615 0.00 0.00 34.79 3.11
5632 6092 8.337532 CAAGGCTTCAAAAAGTTTAATGGAAAG 58.662 33.333 0.00 0.00 34.79 2.62
5633 6093 7.201688 GCAAGGCTTCAAAAAGTTTAATGGAAA 60.202 33.333 0.00 0.00 34.79 3.13
5634 6094 6.259829 GCAAGGCTTCAAAAAGTTTAATGGAA 59.740 34.615 0.00 0.00 34.79 3.53
5635 6095 5.757808 GCAAGGCTTCAAAAAGTTTAATGGA 59.242 36.000 0.00 0.00 34.79 3.41
5636 6096 5.049474 GGCAAGGCTTCAAAAAGTTTAATGG 60.049 40.000 0.00 0.00 34.79 3.16
5637 6097 5.526846 TGGCAAGGCTTCAAAAAGTTTAATG 59.473 36.000 0.00 0.00 34.79 1.90
5638 6098 5.679601 TGGCAAGGCTTCAAAAAGTTTAAT 58.320 33.333 0.00 0.00 34.79 1.40
5639 6099 5.091261 TGGCAAGGCTTCAAAAAGTTTAA 57.909 34.783 0.00 0.00 34.79 1.52
5640 6100 4.744795 TGGCAAGGCTTCAAAAAGTTTA 57.255 36.364 0.00 0.00 34.79 2.01
5641 6101 3.625649 TGGCAAGGCTTCAAAAAGTTT 57.374 38.095 0.00 0.00 34.79 2.66
5642 6102 3.389002 AGATGGCAAGGCTTCAAAAAGTT 59.611 39.130 0.00 0.00 34.79 2.66
5643 6103 2.967887 AGATGGCAAGGCTTCAAAAAGT 59.032 40.909 0.00 0.00 34.79 2.66
5644 6104 3.582780 GAGATGGCAAGGCTTCAAAAAG 58.417 45.455 0.00 0.00 35.47 2.27
5645 6105 2.299867 GGAGATGGCAAGGCTTCAAAAA 59.700 45.455 0.00 0.00 0.00 1.94
5648 6108 0.405198 TGGAGATGGCAAGGCTTCAA 59.595 50.000 0.00 0.00 0.00 2.69
5655 6115 4.578105 GGAACTAAATCTGGAGATGGCAAG 59.422 45.833 0.00 0.00 34.49 4.01
5660 6120 4.133078 GCCTGGAACTAAATCTGGAGATG 58.867 47.826 0.00 0.00 34.49 2.90
5672 6132 7.121168 CAGATAACAAATTCAAGCCTGGAACTA 59.879 37.037 0.00 0.00 0.00 2.24
5682 6142 6.169419 TCGACAGCAGATAACAAATTCAAG 57.831 37.500 0.00 0.00 0.00 3.02
5703 6163 4.663889 GCAGCAAATTCAAATTCGGTTTCG 60.664 41.667 0.00 0.00 37.82 3.46
5715 6175 6.579666 ATTCTTACTTCAGCAGCAAATTCA 57.420 33.333 0.00 0.00 0.00 2.57
5721 6181 5.068591 TCCGTATATTCTTACTTCAGCAGCA 59.931 40.000 0.00 0.00 0.00 4.41
5748 6220 4.243007 CTTCATCCGGTTGAAGCTTTTT 57.757 40.909 31.98 0.00 44.30 1.94
5761 6233 2.676342 CCCCGTCTTTAAACTTCATCCG 59.324 50.000 0.00 0.00 0.00 4.18
5801 6273 4.523558 AGGTTGAGTAGTTGAGTCCAGTAC 59.476 45.833 1.72 1.72 0.00 2.73
5802 6274 4.737578 AGGTTGAGTAGTTGAGTCCAGTA 58.262 43.478 0.00 0.00 0.00 2.74
5803 6275 3.574826 GAGGTTGAGTAGTTGAGTCCAGT 59.425 47.826 0.00 0.00 0.00 4.00
5804 6276 3.056465 GGAGGTTGAGTAGTTGAGTCCAG 60.056 52.174 0.00 0.00 0.00 3.86
5805 6277 2.897969 GGAGGTTGAGTAGTTGAGTCCA 59.102 50.000 0.00 0.00 0.00 4.02
5806 6278 2.094649 CGGAGGTTGAGTAGTTGAGTCC 60.095 54.545 0.00 0.00 0.00 3.85
5807 6279 2.671632 GCGGAGGTTGAGTAGTTGAGTC 60.672 54.545 0.00 0.00 0.00 3.36
5808 6280 1.272769 GCGGAGGTTGAGTAGTTGAGT 59.727 52.381 0.00 0.00 0.00 3.41
5816 6288 4.681978 GCACGGCGGAGGTTGAGT 62.682 66.667 13.24 0.00 0.00 3.41
5836 6308 0.039074 ACGGCGAGAGAGAAACACAG 60.039 55.000 16.62 0.00 0.00 3.66
5837 6309 0.318699 CACGGCGAGAGAGAAACACA 60.319 55.000 16.62 0.00 0.00 3.72
5838 6310 1.618640 GCACGGCGAGAGAGAAACAC 61.619 60.000 16.62 0.00 0.00 3.32
5839 6311 1.372997 GCACGGCGAGAGAGAAACA 60.373 57.895 16.62 0.00 0.00 2.83
5840 6312 2.095252 GGCACGGCGAGAGAGAAAC 61.095 63.158 16.62 0.00 0.00 2.78
5841 6313 2.261671 GGCACGGCGAGAGAGAAA 59.738 61.111 16.62 0.00 0.00 2.52
5842 6314 3.760035 GGGCACGGCGAGAGAGAA 61.760 66.667 16.62 0.00 0.00 2.87
5844 6316 4.069232 TTGGGCACGGCGAGAGAG 62.069 66.667 16.62 0.00 0.00 3.20
5845 6317 4.373116 GTTGGGCACGGCGAGAGA 62.373 66.667 16.62 0.00 0.00 3.10
5863 6335 4.123545 GATCACGGGGGTTGGGGG 62.124 72.222 0.00 0.00 0.00 5.40
5864 6336 4.483243 CGATCACGGGGGTTGGGG 62.483 72.222 0.00 0.00 35.72 4.96
5865 6337 2.265467 AATCGATCACGGGGGTTGGG 62.265 60.000 0.00 0.00 40.21 4.12
5866 6338 0.814010 GAATCGATCACGGGGGTTGG 60.814 60.000 0.00 0.00 40.21 3.77
5867 6339 0.814010 GGAATCGATCACGGGGGTTG 60.814 60.000 0.00 0.00 40.21 3.77
5868 6340 1.525442 GGAATCGATCACGGGGGTT 59.475 57.895 0.00 0.00 40.21 4.11
5869 6341 2.792947 CGGAATCGATCACGGGGGT 61.793 63.158 12.32 0.00 40.21 4.95
5870 6342 2.029073 CGGAATCGATCACGGGGG 59.971 66.667 12.32 0.00 40.21 5.40
5871 6343 3.125607 TCGGAATCGATCACGGGG 58.874 61.111 17.89 0.00 40.88 5.73
5877 6349 6.906694 ACGGAATCGGAATCGGAATCGATC 62.907 50.000 0.00 0.00 46.82 3.69
5879 6351 3.903286 ACGGAATCGGAATCGGAATCGA 61.903 50.000 7.52 0.00 44.66 3.59
5880 6352 1.060713 CGGAATCGGAATCGGAATCG 58.939 55.000 0.00 0.00 36.95 3.34
5881 6353 1.792949 CACGGAATCGGAATCGGAATC 59.207 52.381 7.52 0.00 41.39 2.52
5882 6354 1.865865 CACGGAATCGGAATCGGAAT 58.134 50.000 7.52 0.00 41.39 3.01
5883 6355 0.808453 GCACGGAATCGGAATCGGAA 60.808 55.000 7.52 0.00 41.39 4.30
5884 6356 1.227147 GCACGGAATCGGAATCGGA 60.227 57.895 7.52 0.00 41.39 4.55
5885 6357 1.520564 TGCACGGAATCGGAATCGG 60.521 57.895 0.00 0.00 41.39 4.18
5886 6358 1.636340 GTGCACGGAATCGGAATCG 59.364 57.895 0.00 0.00 41.39 3.34
5887 6359 1.636340 CGTGCACGGAATCGGAATC 59.364 57.895 31.15 0.00 41.39 2.52
5888 6360 2.461110 GCGTGCACGGAATCGGAAT 61.461 57.895 37.47 0.00 41.39 3.01
5889 6361 3.115892 GCGTGCACGGAATCGGAA 61.116 61.111 37.47 0.00 41.39 4.30
5908 6380 4.933064 GGGGCTGATCGCTCGACG 62.933 72.222 8.94 0.00 41.25 5.12
5909 6381 4.933064 CGGGGCTGATCGCTCGAC 62.933 72.222 14.57 0.00 41.25 4.20
5916 6388 3.934962 GAGCTCCCGGGGCTGATC 61.935 72.222 33.03 21.94 40.40 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.