Multiple sequence alignment - TraesCS2D01G495200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G495200 chr2D 100.000 2843 0 0 1 2843 592079395 592082237 0.000000e+00 5251.0
1 TraesCS2D01G495200 chr2D 88.206 992 78 22 961 1920 592115409 592116393 0.000000e+00 1147.0
2 TraesCS2D01G495200 chr2D 88.172 930 65 21 961 1848 592092174 592093100 0.000000e+00 1066.0
3 TraesCS2D01G495200 chr2D 83.681 527 61 16 1042 1546 592031200 592031723 9.220000e-130 473.0
4 TraesCS2D01G495200 chr2D 84.236 406 31 14 1007 1382 592274066 592274468 5.790000e-97 364.0
5 TraesCS2D01G495200 chr2D 80.653 429 44 18 1069 1476 591575281 591575691 2.140000e-76 296.0
6 TraesCS2D01G495200 chr2D 83.183 333 31 13 1166 1476 591603175 591603504 6.000000e-72 281.0
7 TraesCS2D01G495200 chr2D 83.133 332 31 9 1166 1475 591704274 591704602 2.160000e-71 279.0
8 TraesCS2D01G495200 chr2D 89.840 187 6 9 607 785 592101418 592101599 7.920000e-56 228.0
9 TraesCS2D01G495200 chr2D 86.957 207 19 6 1177 1382 591320565 591320764 2.850000e-55 226.0
10 TraesCS2D01G495200 chr2D 78.431 306 32 16 2550 2843 592116734 592117017 4.870000e-38 169.0
11 TraesCS2D01G495200 chr2D 84.496 129 12 1 1919 2047 592093109 592093229 1.380000e-23 121.0
12 TraesCS2D01G495200 chr2D 97.778 45 0 1 870 913 592101593 592101637 3.040000e-10 76.8
13 TraesCS2D01G495200 chr2B 87.548 1052 85 24 961 1976 717775709 717776750 0.000000e+00 1175.0
14 TraesCS2D01G495200 chr2B 87.239 862 56 10 1150 1960 717693910 717694768 0.000000e+00 933.0
15 TraesCS2D01G495200 chr2B 90.577 520 32 10 1956 2460 717757992 717758509 0.000000e+00 673.0
16 TraesCS2D01G495200 chr2B 82.314 605 62 23 1071 1649 717678687 717679272 1.530000e-132 483.0
17 TraesCS2D01G495200 chr2B 93.478 276 17 1 220 494 6518517 6518242 2.640000e-110 409.0
18 TraesCS2D01G495200 chr2B 86.070 402 31 14 1003 1382 717895995 717896393 2.640000e-110 409.0
19 TraesCS2D01G495200 chr2B 89.251 307 23 3 2543 2843 717758509 717758811 2.670000e-100 375.0
20 TraesCS2D01G495200 chr2B 87.540 313 23 10 607 911 717693091 717693395 5.830000e-92 348.0
21 TraesCS2D01G495200 chr2B 90.385 208 16 3 707 912 717773721 717773926 1.300000e-68 270.0
22 TraesCS2D01G495200 chr2A 92.965 597 41 1 972 1567 726592704 726593300 0.000000e+00 869.0
23 TraesCS2D01G495200 chr2A 83.779 524 47 18 1050 1550 726560843 726561351 2.000000e-126 462.0
24 TraesCS2D01G495200 chr2A 85.316 395 32 15 1007 1382 726756016 726756403 4.440000e-103 385.0
25 TraesCS2D01G495200 chr2A 86.486 185 10 4 1683 1867 726593412 726593581 3.740000e-44 189.0
26 TraesCS2D01G495200 chr2A 76.615 325 37 20 2552 2841 726595197 726595517 2.950000e-30 143.0
27 TraesCS2D01G495200 chr2A 100.000 30 0 0 853 882 726753073 726753102 3.960000e-04 56.5
28 TraesCS2D01G495200 chr7A 94.203 276 15 1 220 495 688613309 688613583 1.220000e-113 420.0
29 TraesCS2D01G495200 chr7A 95.431 197 6 3 1 195 113429549 113429744 7.650000e-81 311.0
30 TraesCS2D01G495200 chr7A 95.652 184 7 1 1 183 684123479 684123662 7.700000e-76 294.0
31 TraesCS2D01G495200 chr7A 94.845 97 4 1 2449 2545 28026901 28026996 1.760000e-32 150.0
32 TraesCS2D01G495200 chr7D 94.465 271 15 0 224 494 208558115 208557845 4.380000e-113 418.0
33 TraesCS2D01G495200 chr7D 94.792 96 5 0 2450 2545 11420221 11420126 1.760000e-32 150.0
34 TraesCS2D01G495200 chr3A 94.182 275 12 4 221 493 207678038 207678310 1.580000e-112 416.0
35 TraesCS2D01G495200 chr3D 94.139 273 15 1 223 494 57337603 57337331 5.670000e-112 414.0
36 TraesCS2D01G495200 chr3D 94.022 184 11 0 1 184 191495937 191495754 2.160000e-71 279.0
37 TraesCS2D01G495200 chr3D 93.820 178 10 1 1 177 503748666 503748843 1.680000e-67 267.0
38 TraesCS2D01G495200 chr5A 93.796 274 15 2 222 494 674210803 674211075 7.330000e-111 411.0
39 TraesCS2D01G495200 chr5A 93.214 280 15 4 217 494 696885825 696886102 2.640000e-110 409.0
40 TraesCS2D01G495200 chr1D 93.796 274 15 2 217 489 63367319 63367591 7.330000e-111 411.0
41 TraesCS2D01G495200 chr1D 95.604 182 8 0 1 182 3513123 3512942 2.770000e-75 292.0
42 TraesCS2D01G495200 chr7B 93.190 279 17 2 218 495 693311092 693311369 2.640000e-110 409.0
43 TraesCS2D01G495200 chr7B 93.989 183 10 1 1 182 694261663 694261481 2.790000e-70 276.0
44 TraesCS2D01G495200 chr7B 96.703 91 3 0 2455 2545 719465198 719465288 4.910000e-33 152.0
45 TraesCS2D01G495200 chr5D 96.257 187 6 1 1 186 460227000 460227186 3.560000e-79 305.0
46 TraesCS2D01G495200 chr5D 95.161 186 7 2 1 184 543752683 543752868 2.770000e-75 292.0
47 TraesCS2D01G495200 chr4D 93.617 188 11 1 1 187 260694434 260694621 2.160000e-71 279.0
48 TraesCS2D01G495200 chrUn 94.949 99 4 1 2456 2553 459259784 459259686 1.360000e-33 154.0
49 TraesCS2D01G495200 chr6B 97.727 88 2 0 2458 2545 8775043 8774956 4.910000e-33 152.0
50 TraesCS2D01G495200 chr6B 90.090 111 6 4 2437 2545 643557512 643557619 3.820000e-29 139.0
51 TraesCS2D01G495200 chr6B 96.970 33 1 0 2294 2326 640908950 640908982 3.960000e-04 56.5
52 TraesCS2D01G495200 chr6D 97.701 87 2 0 2459 2545 464673699 464673613 1.760000e-32 150.0
53 TraesCS2D01G495200 chr6A 95.604 91 4 0 2455 2545 553003285 553003195 2.280000e-31 147.0
54 TraesCS2D01G495200 chr4A 94.737 95 3 2 2453 2545 6801465 6801371 2.280000e-31 147.0
55 TraesCS2D01G495200 chr1B 85.882 85 10 2 2243 2326 360874225 360874308 3.900000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G495200 chr2D 592079395 592082237 2842 False 5251.000000 5251 100.000000 1 2843 1 chr2D.!!$F6 2842
1 TraesCS2D01G495200 chr2D 592115409 592117017 1608 False 658.000000 1147 83.318500 961 2843 2 chr2D.!!$F10 1882
2 TraesCS2D01G495200 chr2D 592092174 592093229 1055 False 593.500000 1066 86.334000 961 2047 2 chr2D.!!$F8 1086
3 TraesCS2D01G495200 chr2D 592031200 592031723 523 False 473.000000 473 83.681000 1042 1546 1 chr2D.!!$F5 504
4 TraesCS2D01G495200 chr2B 717773721 717776750 3029 False 722.500000 1175 88.966500 707 1976 2 chr2B.!!$F5 1269
5 TraesCS2D01G495200 chr2B 717693091 717694768 1677 False 640.500000 933 87.389500 607 1960 2 chr2B.!!$F3 1353
6 TraesCS2D01G495200 chr2B 717757992 717758811 819 False 524.000000 673 89.914000 1956 2843 2 chr2B.!!$F4 887
7 TraesCS2D01G495200 chr2B 717678687 717679272 585 False 483.000000 483 82.314000 1071 1649 1 chr2B.!!$F1 578
8 TraesCS2D01G495200 chr2A 726560843 726561351 508 False 462.000000 462 83.779000 1050 1550 1 chr2A.!!$F1 500
9 TraesCS2D01G495200 chr2A 726592704 726595517 2813 False 400.333333 869 85.355333 972 2841 3 chr2A.!!$F2 1869
10 TraesCS2D01G495200 chr2A 726753073 726756403 3330 False 220.750000 385 92.658000 853 1382 2 chr2A.!!$F3 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
273 274 0.035152 CTGCACCAACTAGGGATGCA 60.035 55.0 5.68 5.68 43.7 3.96 F
452 453 0.037605 AAACTCGGGTCGTTAGGCTG 60.038 55.0 0.00 0.00 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 6355 1.153549 CAAGCCGTACAGAGCCTCC 60.154 63.158 0.0 0.0 0.0 4.30 R
1856 6485 1.266718 TGCAACACGGAGCAATTCTTC 59.733 47.619 0.0 0.0 37.9 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.700109 TGCTCCCAAGACGAGAGG 58.300 61.111 0.00 0.00 0.00 3.69
18 19 1.984570 TGCTCCCAAGACGAGAGGG 60.985 63.158 0.00 0.00 44.22 4.30
22 23 2.977578 CCCAAGACGAGAGGGAAGA 58.022 57.895 0.00 0.00 45.80 2.87
23 24 1.267121 CCCAAGACGAGAGGGAAGAA 58.733 55.000 0.00 0.00 45.80 2.52
24 25 1.205893 CCCAAGACGAGAGGGAAGAAG 59.794 57.143 0.00 0.00 45.80 2.85
25 26 2.171840 CCAAGACGAGAGGGAAGAAGA 58.828 52.381 0.00 0.00 0.00 2.87
26 27 2.165437 CCAAGACGAGAGGGAAGAAGAG 59.835 54.545 0.00 0.00 0.00 2.85
27 28 3.085533 CAAGACGAGAGGGAAGAAGAGA 58.914 50.000 0.00 0.00 0.00 3.10
28 29 2.718563 AGACGAGAGGGAAGAAGAGAC 58.281 52.381 0.00 0.00 0.00 3.36
29 30 1.746787 GACGAGAGGGAAGAAGAGACC 59.253 57.143 0.00 0.00 0.00 3.85
30 31 1.356398 ACGAGAGGGAAGAAGAGACCT 59.644 52.381 0.00 0.00 35.67 3.85
31 32 2.577105 ACGAGAGGGAAGAAGAGACCTA 59.423 50.000 0.00 0.00 32.42 3.08
32 33 3.211045 CGAGAGGGAAGAAGAGACCTAG 58.789 54.545 0.00 0.00 32.42 3.02
33 34 3.562182 GAGAGGGAAGAAGAGACCTAGG 58.438 54.545 7.41 7.41 32.42 3.02
34 35 2.246327 AGAGGGAAGAAGAGACCTAGGG 59.754 54.545 14.81 0.00 32.42 3.53
35 36 1.292546 AGGGAAGAAGAGACCTAGGGG 59.707 57.143 14.81 0.00 38.88 4.79
36 37 1.291335 GGGAAGAAGAGACCTAGGGGA 59.709 57.143 14.81 0.00 36.25 4.81
37 38 2.292984 GGGAAGAAGAGACCTAGGGGAA 60.293 54.545 14.81 0.00 36.25 3.97
38 39 3.451890 GGAAGAAGAGACCTAGGGGAAA 58.548 50.000 14.81 0.00 36.25 3.13
39 40 3.198200 GGAAGAAGAGACCTAGGGGAAAC 59.802 52.174 14.81 0.00 36.25 2.78
40 41 2.458620 AGAAGAGACCTAGGGGAAACG 58.541 52.381 14.81 0.00 36.25 3.60
41 42 0.903236 AAGAGACCTAGGGGAAACGC 59.097 55.000 14.81 1.18 45.13 4.84
42 43 0.976590 AGAGACCTAGGGGAAACGCC 60.977 60.000 14.81 0.00 46.15 5.68
118 119 3.132139 CGCGACGAGGGAGGAGAA 61.132 66.667 0.00 0.00 34.27 2.87
119 120 2.482333 CGCGACGAGGGAGGAGAAT 61.482 63.158 0.00 0.00 34.27 2.40
120 121 1.066587 GCGACGAGGGAGGAGAATG 59.933 63.158 0.00 0.00 0.00 2.67
121 122 1.736586 CGACGAGGGAGGAGAATGG 59.263 63.158 0.00 0.00 0.00 3.16
122 123 1.739338 CGACGAGGGAGGAGAATGGG 61.739 65.000 0.00 0.00 0.00 4.00
123 124 0.397254 GACGAGGGAGGAGAATGGGA 60.397 60.000 0.00 0.00 0.00 4.37
124 125 0.397816 ACGAGGGAGGAGAATGGGAG 60.398 60.000 0.00 0.00 0.00 4.30
125 126 1.118356 CGAGGGAGGAGAATGGGAGG 61.118 65.000 0.00 0.00 0.00 4.30
126 127 0.766288 GAGGGAGGAGAATGGGAGGG 60.766 65.000 0.00 0.00 0.00 4.30
127 128 2.456443 GGGAGGAGAATGGGAGGGC 61.456 68.421 0.00 0.00 0.00 5.19
128 129 2.812619 GGAGGAGAATGGGAGGGCG 61.813 68.421 0.00 0.00 0.00 6.13
129 130 2.770048 AGGAGAATGGGAGGGCGG 60.770 66.667 0.00 0.00 0.00 6.13
130 131 3.090532 GGAGAATGGGAGGGCGGT 61.091 66.667 0.00 0.00 0.00 5.68
131 132 2.190578 GAGAATGGGAGGGCGGTG 59.809 66.667 0.00 0.00 0.00 4.94
132 133 3.406595 GAGAATGGGAGGGCGGTGG 62.407 68.421 0.00 0.00 0.00 4.61
133 134 4.506255 GAATGGGAGGGCGGTGGG 62.506 72.222 0.00 0.00 0.00 4.61
145 146 4.394712 GGTGGGTGTCGCTGGGAG 62.395 72.222 0.00 0.00 0.00 4.30
146 147 3.626924 GTGGGTGTCGCTGGGAGT 61.627 66.667 0.00 0.00 0.00 3.85
147 148 3.311110 TGGGTGTCGCTGGGAGTC 61.311 66.667 0.00 0.00 0.00 3.36
148 149 4.436998 GGGTGTCGCTGGGAGTCG 62.437 72.222 0.00 0.00 0.00 4.18
170 171 4.135153 CGTGTCGCCAGAGGAGGG 62.135 72.222 0.00 0.00 0.00 4.30
193 194 4.904590 CGGGGGTTGTTGGGTGCA 62.905 66.667 0.00 0.00 0.00 4.57
194 195 3.230990 GGGGGTTGTTGGGTGCAC 61.231 66.667 8.80 8.80 0.00 4.57
195 196 2.123468 GGGGTTGTTGGGTGCACT 60.123 61.111 17.98 0.00 0.00 4.40
196 197 2.200337 GGGGTTGTTGGGTGCACTC 61.200 63.158 17.98 14.58 0.00 3.51
197 198 1.454847 GGGTTGTTGGGTGCACTCA 60.455 57.895 17.47 17.47 0.00 3.41
198 199 1.040339 GGGTTGTTGGGTGCACTCAA 61.040 55.000 28.15 28.15 0.00 3.02
199 200 0.820871 GGTTGTTGGGTGCACTCAAA 59.179 50.000 32.86 19.79 0.00 2.69
200 201 1.470805 GGTTGTTGGGTGCACTCAAAC 60.471 52.381 32.86 26.34 0.00 2.93
201 202 1.203523 GTTGTTGGGTGCACTCAAACA 59.796 47.619 32.86 26.81 0.00 2.83
202 203 1.550327 TGTTGGGTGCACTCAAACAA 58.450 45.000 32.86 18.75 0.00 2.83
203 204 1.895798 TGTTGGGTGCACTCAAACAAA 59.104 42.857 32.86 16.28 0.00 2.83
204 205 2.267426 GTTGGGTGCACTCAAACAAAC 58.733 47.619 32.86 17.85 0.00 2.93
205 206 1.846007 TGGGTGCACTCAAACAAACT 58.154 45.000 19.35 0.00 0.00 2.66
206 207 2.175202 TGGGTGCACTCAAACAAACTT 58.825 42.857 19.35 0.00 0.00 2.66
207 208 3.357203 TGGGTGCACTCAAACAAACTTA 58.643 40.909 19.35 0.00 0.00 2.24
208 209 3.380004 TGGGTGCACTCAAACAAACTTAG 59.620 43.478 19.35 0.00 0.00 2.18
209 210 3.372060 GGTGCACTCAAACAAACTTAGC 58.628 45.455 17.98 0.00 0.00 3.09
210 211 3.066760 GGTGCACTCAAACAAACTTAGCT 59.933 43.478 17.98 0.00 0.00 3.32
211 212 4.274950 GGTGCACTCAAACAAACTTAGCTA 59.725 41.667 17.98 0.00 0.00 3.32
212 213 5.444122 GTGCACTCAAACAAACTTAGCTAG 58.556 41.667 10.32 0.00 0.00 3.42
213 214 4.024048 TGCACTCAAACAAACTTAGCTAGC 60.024 41.667 6.62 6.62 0.00 3.42
214 215 4.024048 GCACTCAAACAAACTTAGCTAGCA 60.024 41.667 18.83 0.00 0.00 3.49
215 216 5.335191 GCACTCAAACAAACTTAGCTAGCAT 60.335 40.000 18.83 4.67 0.00 3.79
216 217 6.082338 CACTCAAACAAACTTAGCTAGCATG 58.918 40.000 18.83 8.73 0.00 4.06
217 218 5.046910 TCAAACAAACTTAGCTAGCATGC 57.953 39.130 18.83 10.51 0.00 4.06
218 219 4.761739 TCAAACAAACTTAGCTAGCATGCT 59.238 37.500 25.99 25.99 46.11 3.79
219 220 5.241506 TCAAACAAACTTAGCTAGCATGCTT 59.758 36.000 28.02 10.94 43.74 3.91
220 221 5.712152 AACAAACTTAGCTAGCATGCTTT 57.288 34.783 28.02 14.42 43.74 3.51
221 222 5.712152 ACAAACTTAGCTAGCATGCTTTT 57.288 34.783 28.02 15.22 43.74 2.27
222 223 6.089249 ACAAACTTAGCTAGCATGCTTTTT 57.911 33.333 28.02 13.68 43.74 1.94
223 224 7.214467 ACAAACTTAGCTAGCATGCTTTTTA 57.786 32.000 28.02 12.64 43.74 1.52
224 225 7.657336 ACAAACTTAGCTAGCATGCTTTTTAA 58.343 30.769 28.02 18.69 43.74 1.52
225 226 8.141268 ACAAACTTAGCTAGCATGCTTTTTAAA 58.859 29.630 28.02 12.93 43.74 1.52
226 227 8.977505 CAAACTTAGCTAGCATGCTTTTTAAAA 58.022 29.630 28.02 11.90 43.74 1.52
227 228 9.710900 AAACTTAGCTAGCATGCTTTTTAAAAT 57.289 25.926 28.02 9.68 43.74 1.82
228 229 9.710900 AACTTAGCTAGCATGCTTTTTAAAATT 57.289 25.926 28.02 14.17 43.74 1.82
229 230 9.143631 ACTTAGCTAGCATGCTTTTTAAAATTG 57.856 29.630 28.02 11.46 43.74 2.32
230 231 6.973229 AGCTAGCATGCTTTTTAAAATTGG 57.027 33.333 28.02 0.00 40.93 3.16
231 232 5.876460 AGCTAGCATGCTTTTTAAAATTGGG 59.124 36.000 28.02 0.00 40.93 4.12
232 233 5.065090 GCTAGCATGCTTTTTAAAATTGGGG 59.935 40.000 28.02 0.00 0.00 4.96
233 234 5.240013 AGCATGCTTTTTAAAATTGGGGA 57.760 34.783 16.30 0.00 0.00 4.81
234 235 5.247862 AGCATGCTTTTTAAAATTGGGGAG 58.752 37.500 16.30 0.00 0.00 4.30
235 236 5.012975 AGCATGCTTTTTAAAATTGGGGAGA 59.987 36.000 16.30 0.00 0.00 3.71
236 237 5.704978 GCATGCTTTTTAAAATTGGGGAGAA 59.295 36.000 11.37 0.00 0.00 2.87
237 238 6.375174 GCATGCTTTTTAAAATTGGGGAGAAT 59.625 34.615 11.37 0.00 0.00 2.40
238 239 7.094248 GCATGCTTTTTAAAATTGGGGAGAATT 60.094 33.333 11.37 0.00 0.00 2.17
239 240 8.795513 CATGCTTTTTAAAATTGGGGAGAATTT 58.204 29.630 0.55 0.00 37.16 1.82
240 241 8.389779 TGCTTTTTAAAATTGGGGAGAATTTC 57.610 30.769 0.55 0.00 35.01 2.17
241 242 7.995488 TGCTTTTTAAAATTGGGGAGAATTTCA 59.005 29.630 0.55 0.00 35.01 2.69
242 243 8.289618 GCTTTTTAAAATTGGGGAGAATTTCAC 58.710 33.333 0.55 0.00 35.01 3.18
243 244 9.559732 CTTTTTAAAATTGGGGAGAATTTCACT 57.440 29.630 0.55 0.00 35.01 3.41
244 245 9.913310 TTTTTAAAATTGGGGAGAATTTCACTT 57.087 25.926 0.55 0.00 35.01 3.16
245 246 9.554395 TTTTAAAATTGGGGAGAATTTCACTTC 57.446 29.630 0.00 0.00 35.01 3.01
246 247 5.745312 AAATTGGGGAGAATTTCACTTCC 57.255 39.130 0.00 0.00 31.21 3.46
248 249 2.145397 GGGGAGAATTTCACTTCCCC 57.855 55.000 20.02 20.02 45.11 4.81
249 250 1.682087 GGGGAGAATTTCACTTCCCCG 60.682 57.143 20.02 0.00 45.11 5.73
250 251 1.682087 GGGAGAATTTCACTTCCCCGG 60.682 57.143 9.95 0.00 30.77 5.73
251 252 1.095600 GAGAATTTCACTTCCCCGGC 58.904 55.000 0.00 0.00 0.00 6.13
252 253 0.323451 AGAATTTCACTTCCCCGGCC 60.323 55.000 0.00 0.00 0.00 6.13
253 254 0.323451 GAATTTCACTTCCCCGGCCT 60.323 55.000 0.00 0.00 0.00 5.19
254 255 0.323451 AATTTCACTTCCCCGGCCTC 60.323 55.000 0.00 0.00 0.00 4.70
255 256 1.208165 ATTTCACTTCCCCGGCCTCT 61.208 55.000 0.00 0.00 0.00 3.69
256 257 2.124507 TTTCACTTCCCCGGCCTCTG 62.125 60.000 0.00 0.00 0.00 3.35
257 258 4.785453 CACTTCCCCGGCCTCTGC 62.785 72.222 0.00 0.00 0.00 4.26
259 260 4.785453 CTTCCCCGGCCTCTGCAC 62.785 72.222 0.00 0.00 40.13 4.57
264 265 4.335647 CCGGCCTCTGCACCAACT 62.336 66.667 0.00 0.00 40.13 3.16
265 266 2.662596 CGGCCTCTGCACCAACTA 59.337 61.111 0.00 0.00 40.13 2.24
266 267 1.448540 CGGCCTCTGCACCAACTAG 60.449 63.158 0.00 0.00 40.13 2.57
267 268 1.078143 GGCCTCTGCACCAACTAGG 60.078 63.158 0.00 0.00 45.67 3.02
268 269 1.078143 GCCTCTGCACCAACTAGGG 60.078 63.158 0.00 0.00 43.89 3.53
269 270 1.553690 GCCTCTGCACCAACTAGGGA 61.554 60.000 0.00 0.00 43.89 4.20
270 271 1.207791 CCTCTGCACCAACTAGGGAT 58.792 55.000 0.00 0.00 43.89 3.85
271 272 1.134280 CCTCTGCACCAACTAGGGATG 60.134 57.143 0.00 0.00 43.89 3.51
272 273 0.253044 TCTGCACCAACTAGGGATGC 59.747 55.000 0.00 0.00 43.89 3.91
273 274 0.035152 CTGCACCAACTAGGGATGCA 60.035 55.000 5.68 5.68 43.70 3.96
274 275 0.625316 TGCACCAACTAGGGATGCAT 59.375 50.000 0.00 0.00 41.18 3.96
275 276 1.843206 TGCACCAACTAGGGATGCATA 59.157 47.619 0.00 0.00 41.18 3.14
276 277 2.222027 GCACCAACTAGGGATGCATAC 58.778 52.381 0.00 0.00 43.89 2.39
277 278 2.483876 CACCAACTAGGGATGCATACG 58.516 52.381 1.96 0.00 43.89 3.06
278 279 1.416401 ACCAACTAGGGATGCATACGG 59.584 52.381 1.96 0.00 43.89 4.02
279 280 1.512926 CAACTAGGGATGCATACGGC 58.487 55.000 1.96 0.00 45.13 5.68
280 281 0.396811 AACTAGGGATGCATACGGCC 59.603 55.000 1.96 0.00 43.89 6.13
281 282 0.762842 ACTAGGGATGCATACGGCCA 60.763 55.000 2.24 0.00 43.89 5.36
282 283 0.615331 CTAGGGATGCATACGGCCAT 59.385 55.000 2.24 0.00 43.89 4.40
283 284 1.003580 CTAGGGATGCATACGGCCATT 59.996 52.381 2.24 0.00 43.89 3.16
284 285 0.185901 AGGGATGCATACGGCCATTT 59.814 50.000 2.24 0.00 43.89 2.32
285 286 1.039856 GGGATGCATACGGCCATTTT 58.960 50.000 2.24 0.00 43.89 1.82
286 287 2.158534 AGGGATGCATACGGCCATTTTA 60.159 45.455 2.24 0.00 43.89 1.52
287 288 2.228822 GGGATGCATACGGCCATTTTAG 59.771 50.000 2.24 0.00 43.89 1.85
288 289 2.884639 GGATGCATACGGCCATTTTAGT 59.115 45.455 2.24 0.00 43.89 2.24
289 290 4.069304 GGATGCATACGGCCATTTTAGTA 58.931 43.478 2.24 0.00 43.89 1.82
290 291 4.700213 GGATGCATACGGCCATTTTAGTAT 59.300 41.667 2.24 0.00 43.89 2.12
291 292 5.391950 GGATGCATACGGCCATTTTAGTATG 60.392 44.000 17.22 17.22 45.34 2.39
292 293 4.709250 TGCATACGGCCATTTTAGTATGA 58.291 39.130 22.80 10.38 45.38 2.15
293 294 4.754618 TGCATACGGCCATTTTAGTATGAG 59.245 41.667 22.80 5.28 45.38 2.90
294 295 4.755123 GCATACGGCCATTTTAGTATGAGT 59.245 41.667 22.80 3.85 45.38 3.41
295 296 5.929992 GCATACGGCCATTTTAGTATGAGTA 59.070 40.000 22.80 5.76 45.38 2.59
296 297 6.128634 GCATACGGCCATTTTAGTATGAGTAC 60.129 42.308 22.80 7.64 45.38 2.73
297 298 4.700700 ACGGCCATTTTAGTATGAGTACC 58.299 43.478 2.24 0.00 0.00 3.34
298 299 4.162698 ACGGCCATTTTAGTATGAGTACCA 59.837 41.667 2.24 0.00 0.00 3.25
299 300 5.120399 CGGCCATTTTAGTATGAGTACCAA 58.880 41.667 2.24 0.00 0.00 3.67
300 301 5.587043 CGGCCATTTTAGTATGAGTACCAAA 59.413 40.000 2.24 0.00 0.00 3.28
301 302 6.094325 CGGCCATTTTAGTATGAGTACCAAAA 59.906 38.462 2.24 0.00 36.39 2.44
302 303 7.201785 CGGCCATTTTAGTATGAGTACCAAAAT 60.202 37.037 2.24 0.90 40.41 1.82
303 304 9.127277 GGCCATTTTAGTATGAGTACCAAAATA 57.873 33.333 0.00 0.00 38.90 1.40
312 313 9.174166 AGTATGAGTACCAAAATAAACATGGTC 57.826 33.333 0.00 0.00 34.38 4.02
313 314 6.827586 TGAGTACCAAAATAAACATGGTCC 57.172 37.500 0.00 0.00 34.38 4.46
314 315 6.548321 TGAGTACCAAAATAAACATGGTCCT 58.452 36.000 0.00 0.00 34.38 3.85
315 316 6.657541 TGAGTACCAAAATAAACATGGTCCTC 59.342 38.462 9.13 9.13 36.54 3.71
316 317 6.548321 AGTACCAAAATAAACATGGTCCTCA 58.452 36.000 0.00 0.00 34.38 3.86
317 318 5.982890 ACCAAAATAAACATGGTCCTCAG 57.017 39.130 0.00 0.00 0.00 3.35
318 319 5.640147 ACCAAAATAAACATGGTCCTCAGA 58.360 37.500 0.00 0.00 0.00 3.27
319 320 6.074648 ACCAAAATAAACATGGTCCTCAGAA 58.925 36.000 0.00 0.00 0.00 3.02
320 321 6.725834 ACCAAAATAAACATGGTCCTCAGAAT 59.274 34.615 0.00 0.00 0.00 2.40
321 322 7.235399 ACCAAAATAAACATGGTCCTCAGAATT 59.765 33.333 0.00 0.00 0.00 2.17
322 323 8.096414 CCAAAATAAACATGGTCCTCAGAATTT 58.904 33.333 0.00 0.00 0.00 1.82
323 324 9.492973 CAAAATAAACATGGTCCTCAGAATTTT 57.507 29.630 0.00 0.00 0.00 1.82
376 377 3.904717 TGGTTTCACCATACACCAAACT 58.095 40.909 0.00 0.00 44.79 2.66
377 378 4.282496 TGGTTTCACCATACACCAAACTT 58.718 39.130 0.00 0.00 44.79 2.66
378 379 4.098654 TGGTTTCACCATACACCAAACTTG 59.901 41.667 0.00 0.00 44.79 3.16
379 380 4.339814 GGTTTCACCATACACCAAACTTGA 59.660 41.667 0.00 0.00 38.42 3.02
380 381 5.010617 GGTTTCACCATACACCAAACTTGAT 59.989 40.000 0.00 0.00 38.42 2.57
381 382 5.957842 TTCACCATACACCAAACTTGATC 57.042 39.130 0.00 0.00 0.00 2.92
382 383 4.331968 TCACCATACACCAAACTTGATCC 58.668 43.478 0.00 0.00 0.00 3.36
383 384 4.042809 TCACCATACACCAAACTTGATCCT 59.957 41.667 0.00 0.00 0.00 3.24
384 385 4.396166 CACCATACACCAAACTTGATCCTC 59.604 45.833 0.00 0.00 0.00 3.71
385 386 4.042809 ACCATACACCAAACTTGATCCTCA 59.957 41.667 0.00 0.00 0.00 3.86
386 387 5.009631 CCATACACCAAACTTGATCCTCAA 58.990 41.667 0.00 0.00 34.79 3.02
387 388 5.653769 CCATACACCAAACTTGATCCTCAAT 59.346 40.000 0.00 0.00 35.59 2.57
388 389 6.828273 CCATACACCAAACTTGATCCTCAATA 59.172 38.462 0.00 0.00 35.59 1.90
389 390 7.339212 CCATACACCAAACTTGATCCTCAATAA 59.661 37.037 0.00 0.00 35.59 1.40
390 391 8.739039 CATACACCAAACTTGATCCTCAATAAA 58.261 33.333 0.00 0.00 35.59 1.40
391 392 7.781324 ACACCAAACTTGATCCTCAATAAAT 57.219 32.000 0.00 0.00 35.59 1.40
392 393 7.605449 ACACCAAACTTGATCCTCAATAAATG 58.395 34.615 0.00 0.00 35.59 2.32
393 394 7.451255 ACACCAAACTTGATCCTCAATAAATGA 59.549 33.333 0.00 0.00 35.59 2.57
413 414 3.000815 GGAAACCTCTTGTGCGTCA 57.999 52.632 0.00 0.00 0.00 4.35
414 415 1.523758 GGAAACCTCTTGTGCGTCAT 58.476 50.000 0.00 0.00 0.00 3.06
415 416 1.464997 GGAAACCTCTTGTGCGTCATC 59.535 52.381 0.00 0.00 0.00 2.92
416 417 2.417719 GAAACCTCTTGTGCGTCATCT 58.582 47.619 0.00 0.00 0.00 2.90
417 418 1.800805 AACCTCTTGTGCGTCATCTG 58.199 50.000 0.00 0.00 0.00 2.90
418 419 0.681733 ACCTCTTGTGCGTCATCTGT 59.318 50.000 0.00 0.00 0.00 3.41
419 420 1.073964 CCTCTTGTGCGTCATCTGTG 58.926 55.000 0.00 0.00 0.00 3.66
420 421 1.337167 CCTCTTGTGCGTCATCTGTGA 60.337 52.381 0.00 0.00 0.00 3.58
421 422 2.407090 CTCTTGTGCGTCATCTGTGAA 58.593 47.619 0.00 0.00 35.80 3.18
422 423 2.998670 CTCTTGTGCGTCATCTGTGAAT 59.001 45.455 0.00 0.00 35.80 2.57
423 424 3.402110 TCTTGTGCGTCATCTGTGAATT 58.598 40.909 0.00 0.00 35.80 2.17
424 425 3.814842 TCTTGTGCGTCATCTGTGAATTT 59.185 39.130 0.00 0.00 35.80 1.82
425 426 4.275689 TCTTGTGCGTCATCTGTGAATTTT 59.724 37.500 0.00 0.00 35.80 1.82
426 427 5.468409 TCTTGTGCGTCATCTGTGAATTTTA 59.532 36.000 0.00 0.00 35.80 1.52
427 428 5.681337 TGTGCGTCATCTGTGAATTTTAA 57.319 34.783 0.00 0.00 35.80 1.52
428 429 5.688823 TGTGCGTCATCTGTGAATTTTAAG 58.311 37.500 0.00 0.00 35.80 1.85
429 430 5.468409 TGTGCGTCATCTGTGAATTTTAAGA 59.532 36.000 0.00 0.00 35.80 2.10
430 431 6.017523 TGTGCGTCATCTGTGAATTTTAAGAA 60.018 34.615 0.00 0.00 35.80 2.52
431 432 7.023575 GTGCGTCATCTGTGAATTTTAAGAAT 58.976 34.615 0.00 0.00 35.80 2.40
432 433 7.538678 GTGCGTCATCTGTGAATTTTAAGAATT 59.461 33.333 0.00 0.00 35.80 2.17
433 434 8.726068 TGCGTCATCTGTGAATTTTAAGAATTA 58.274 29.630 0.00 0.00 35.80 1.40
434 435 9.554724 GCGTCATCTGTGAATTTTAAGAATTAA 57.445 29.630 0.00 0.00 35.87 1.40
448 449 7.816945 TTAAGAATTAAACTCGGGTCGTTAG 57.183 36.000 0.00 0.00 37.67 2.34
449 450 4.752146 AGAATTAAACTCGGGTCGTTAGG 58.248 43.478 0.00 0.00 0.00 2.69
450 451 2.368655 TTAAACTCGGGTCGTTAGGC 57.631 50.000 0.00 0.00 0.00 3.93
451 452 1.549203 TAAACTCGGGTCGTTAGGCT 58.451 50.000 0.00 0.00 0.00 4.58
452 453 0.037605 AAACTCGGGTCGTTAGGCTG 60.038 55.000 0.00 0.00 0.00 4.85
453 454 2.202756 CTCGGGTCGTTAGGCTGC 60.203 66.667 0.00 0.00 0.00 5.25
454 455 2.992689 TCGGGTCGTTAGGCTGCA 60.993 61.111 0.50 0.00 0.00 4.41
455 456 2.813908 CGGGTCGTTAGGCTGCAC 60.814 66.667 0.50 0.00 0.00 4.57
456 457 2.345991 GGGTCGTTAGGCTGCACA 59.654 61.111 0.50 0.00 0.00 4.57
457 458 1.302192 GGGTCGTTAGGCTGCACAA 60.302 57.895 0.50 0.00 0.00 3.33
458 459 1.574702 GGGTCGTTAGGCTGCACAAC 61.575 60.000 0.50 3.77 0.00 3.32
459 460 1.574702 GGTCGTTAGGCTGCACAACC 61.575 60.000 0.50 0.00 0.00 3.77
460 461 1.666553 TCGTTAGGCTGCACAACCG 60.667 57.895 0.50 0.00 0.00 4.44
461 462 2.561373 GTTAGGCTGCACAACCGC 59.439 61.111 0.50 0.00 0.00 5.68
462 463 2.112087 TTAGGCTGCACAACCGCA 59.888 55.556 0.50 0.00 40.32 5.69
463 464 1.303236 TTAGGCTGCACAACCGCAT 60.303 52.632 0.50 0.00 42.06 4.73
464 465 1.585267 TTAGGCTGCACAACCGCATG 61.585 55.000 0.50 0.00 42.06 4.06
467 468 4.424566 CTGCACAACCGCATGCCC 62.425 66.667 13.15 0.00 42.06 5.36
469 470 3.988525 GCACAACCGCATGCCCAA 61.989 61.111 13.15 0.00 35.73 4.12
470 471 2.049248 CACAACCGCATGCCCAAC 60.049 61.111 13.15 0.00 0.00 3.77
471 472 3.302344 ACAACCGCATGCCCAACC 61.302 61.111 13.15 0.00 0.00 3.77
472 473 3.301554 CAACCGCATGCCCAACCA 61.302 61.111 13.15 0.00 0.00 3.67
473 474 3.302344 AACCGCATGCCCAACCAC 61.302 61.111 13.15 0.00 0.00 4.16
474 475 3.808218 AACCGCATGCCCAACCACT 62.808 57.895 13.15 0.00 0.00 4.00
475 476 3.751246 CCGCATGCCCAACCACTG 61.751 66.667 13.15 0.00 0.00 3.66
476 477 2.672651 CGCATGCCCAACCACTGA 60.673 61.111 13.15 0.00 0.00 3.41
477 478 2.693762 CGCATGCCCAACCACTGAG 61.694 63.158 13.15 0.00 0.00 3.35
478 479 2.998279 GCATGCCCAACCACTGAGC 61.998 63.158 6.36 0.00 0.00 4.26
479 480 2.036256 ATGCCCAACCACTGAGCC 59.964 61.111 0.00 0.00 0.00 4.70
480 481 2.844195 ATGCCCAACCACTGAGCCA 61.844 57.895 0.00 0.00 0.00 4.75
481 482 2.203480 GCCCAACCACTGAGCCAA 60.203 61.111 0.00 0.00 0.00 4.52
482 483 2.270986 GCCCAACCACTGAGCCAAG 61.271 63.158 0.00 0.00 0.00 3.61
483 484 1.604593 CCCAACCACTGAGCCAAGG 60.605 63.158 0.00 0.00 0.00 3.61
484 485 2.270986 CCAACCACTGAGCCAAGGC 61.271 63.158 2.02 2.02 42.33 4.35
499 500 2.361737 GGCTCTCTTTGCCCCCAC 60.362 66.667 0.00 0.00 44.32 4.61
500 501 2.436109 GCTCTCTTTGCCCCCACA 59.564 61.111 0.00 0.00 0.00 4.17
501 502 1.676967 GCTCTCTTTGCCCCCACAG 60.677 63.158 0.00 0.00 0.00 3.66
502 503 1.676967 CTCTCTTTGCCCCCACAGC 60.677 63.158 0.00 0.00 0.00 4.40
503 504 2.115910 CTCTTTGCCCCCACAGCA 59.884 61.111 0.00 0.00 38.81 4.41
507 508 3.312718 TTGCCCCCACAGCAATGC 61.313 61.111 0.00 0.00 44.95 3.56
508 509 4.617556 TGCCCCCACAGCAATGCA 62.618 61.111 8.35 0.00 37.28 3.96
509 510 4.073200 GCCCCCACAGCAATGCAC 62.073 66.667 8.35 0.00 0.00 4.57
510 511 3.751246 CCCCCACAGCAATGCACG 61.751 66.667 8.35 0.00 0.00 5.34
511 512 2.985282 CCCCACAGCAATGCACGT 60.985 61.111 8.35 0.50 0.00 4.49
512 513 1.673993 CCCCACAGCAATGCACGTA 60.674 57.895 8.35 0.00 0.00 3.57
513 514 1.647545 CCCCACAGCAATGCACGTAG 61.648 60.000 8.35 0.00 0.00 3.51
514 515 0.673333 CCCACAGCAATGCACGTAGA 60.673 55.000 8.35 0.00 0.00 2.59
515 516 1.372582 CCACAGCAATGCACGTAGAT 58.627 50.000 8.35 0.00 0.00 1.98
516 517 1.739466 CCACAGCAATGCACGTAGATT 59.261 47.619 8.35 0.00 0.00 2.40
517 518 2.223112 CCACAGCAATGCACGTAGATTC 60.223 50.000 8.35 0.00 0.00 2.52
518 519 1.660607 ACAGCAATGCACGTAGATTCG 59.339 47.619 8.35 0.00 0.00 3.34
519 520 0.652592 AGCAATGCACGTAGATTCGC 59.347 50.000 8.35 0.00 0.00 4.70
520 521 0.316196 GCAATGCACGTAGATTCGCC 60.316 55.000 0.00 0.00 0.00 5.54
521 522 0.304705 CAATGCACGTAGATTCGCCC 59.695 55.000 0.00 0.00 0.00 6.13
522 523 0.814010 AATGCACGTAGATTCGCCCC 60.814 55.000 0.00 0.00 0.00 5.80
523 524 1.686325 ATGCACGTAGATTCGCCCCT 61.686 55.000 0.00 0.00 0.00 4.79
524 525 1.883084 GCACGTAGATTCGCCCCTG 60.883 63.158 0.00 0.00 0.00 4.45
525 526 1.883084 CACGTAGATTCGCCCCTGC 60.883 63.158 0.00 0.00 0.00 4.85
526 527 2.058595 ACGTAGATTCGCCCCTGCT 61.059 57.895 0.00 0.00 34.43 4.24
527 528 1.592669 CGTAGATTCGCCCCTGCTG 60.593 63.158 0.00 0.00 34.43 4.41
528 529 1.889573 GTAGATTCGCCCCTGCTGC 60.890 63.158 0.00 0.00 34.43 5.25
529 530 2.066393 TAGATTCGCCCCTGCTGCT 61.066 57.895 0.00 0.00 34.43 4.24
530 531 1.626356 TAGATTCGCCCCTGCTGCTT 61.626 55.000 0.00 0.00 34.43 3.91
531 532 2.753043 ATTCGCCCCTGCTGCTTG 60.753 61.111 0.00 0.00 34.43 4.01
532 533 3.574074 ATTCGCCCCTGCTGCTTGT 62.574 57.895 0.00 0.00 34.43 3.16
533 534 3.790416 TTCGCCCCTGCTGCTTGTT 62.790 57.895 0.00 0.00 34.43 2.83
534 535 4.047059 CGCCCCTGCTGCTTGTTG 62.047 66.667 0.00 0.00 34.43 3.33
535 536 3.688159 GCCCCTGCTGCTTGTTGG 61.688 66.667 0.00 0.00 33.53 3.77
536 537 2.115910 CCCCTGCTGCTTGTTGGA 59.884 61.111 0.00 0.00 0.00 3.53
537 538 1.975407 CCCCTGCTGCTTGTTGGAG 60.975 63.158 0.00 0.00 37.17 3.86
538 539 1.975407 CCCTGCTGCTTGTTGGAGG 60.975 63.158 0.00 0.00 40.78 4.30
539 540 2.633509 CCTGCTGCTTGTTGGAGGC 61.634 63.158 0.00 0.00 35.14 4.70
540 541 2.974489 CTGCTGCTTGTTGGAGGCG 61.974 63.158 0.00 0.00 34.46 5.52
541 542 2.980233 GCTGCTTGTTGGAGGCGT 60.980 61.111 0.00 0.00 34.46 5.68
542 543 2.555547 GCTGCTTGTTGGAGGCGTT 61.556 57.895 0.00 0.00 34.46 4.84
543 544 1.283793 CTGCTTGTTGGAGGCGTTG 59.716 57.895 0.00 0.00 0.00 4.10
544 545 1.447317 CTGCTTGTTGGAGGCGTTGT 61.447 55.000 0.00 0.00 0.00 3.32
545 546 0.179043 TGCTTGTTGGAGGCGTTGTA 60.179 50.000 0.00 0.00 0.00 2.41
546 547 0.237498 GCTTGTTGGAGGCGTTGTAC 59.763 55.000 0.00 0.00 0.00 2.90
547 548 1.878953 CTTGTTGGAGGCGTTGTACT 58.121 50.000 0.00 0.00 0.00 2.73
548 549 1.798813 CTTGTTGGAGGCGTTGTACTC 59.201 52.381 0.00 0.00 0.00 2.59
549 550 1.045407 TGTTGGAGGCGTTGTACTCT 58.955 50.000 0.00 0.00 34.22 3.24
550 551 1.000506 TGTTGGAGGCGTTGTACTCTC 59.999 52.381 0.00 0.00 34.22 3.20
551 552 1.000506 GTTGGAGGCGTTGTACTCTCA 59.999 52.381 0.00 0.00 34.22 3.27
552 553 0.601558 TGGAGGCGTTGTACTCTCAC 59.398 55.000 0.00 0.00 34.22 3.51
553 554 0.108756 GGAGGCGTTGTACTCTCACC 60.109 60.000 0.00 0.00 34.22 4.02
554 555 0.108756 GAGGCGTTGTACTCTCACCC 60.109 60.000 0.00 0.00 0.00 4.61
555 556 0.542232 AGGCGTTGTACTCTCACCCT 60.542 55.000 0.00 0.00 0.00 4.34
556 557 0.389948 GGCGTTGTACTCTCACCCTG 60.390 60.000 0.00 0.00 0.00 4.45
557 558 0.601558 GCGTTGTACTCTCACCCTGA 59.398 55.000 0.00 0.00 0.00 3.86
558 559 1.402984 GCGTTGTACTCTCACCCTGAG 60.403 57.143 0.00 0.00 45.59 3.35
559 560 1.402984 CGTTGTACTCTCACCCTGAGC 60.403 57.143 0.00 0.00 43.95 4.26
560 561 1.896465 GTTGTACTCTCACCCTGAGCT 59.104 52.381 0.00 0.00 43.95 4.09
561 562 3.090037 GTTGTACTCTCACCCTGAGCTA 58.910 50.000 0.00 0.00 43.95 3.32
562 563 3.451402 TGTACTCTCACCCTGAGCTAA 57.549 47.619 0.00 0.00 43.95 3.09
563 564 3.357203 TGTACTCTCACCCTGAGCTAAG 58.643 50.000 0.00 0.00 43.95 2.18
564 565 1.190643 ACTCTCACCCTGAGCTAAGC 58.809 55.000 0.00 0.00 43.95 3.09
565 566 0.463620 CTCTCACCCTGAGCTAAGCC 59.536 60.000 0.00 0.00 43.95 4.35
566 567 0.978146 TCTCACCCTGAGCTAAGCCC 60.978 60.000 0.00 0.00 43.95 5.19
567 568 2.187946 CACCCTGAGCTAAGCCCG 59.812 66.667 0.00 0.00 0.00 6.13
568 569 3.083997 ACCCTGAGCTAAGCCCGG 61.084 66.667 0.00 0.00 0.00 5.73
569 570 2.764128 CCCTGAGCTAAGCCCGGA 60.764 66.667 0.73 0.00 0.00 5.14
570 571 2.801631 CCCTGAGCTAAGCCCGGAG 61.802 68.421 0.73 0.00 0.00 4.63
590 591 4.374702 GTGCTGCGTGGCTTCGTG 62.375 66.667 0.00 0.91 0.00 4.35
591 592 4.908687 TGCTGCGTGGCTTCGTGT 62.909 61.111 0.00 0.00 0.00 4.49
592 593 4.374702 GCTGCGTGGCTTCGTGTG 62.375 66.667 4.88 0.00 0.00 3.82
593 594 2.967076 CTGCGTGGCTTCGTGTGT 60.967 61.111 4.88 0.00 0.00 3.72
594 595 3.227372 CTGCGTGGCTTCGTGTGTG 62.227 63.158 4.88 0.00 0.00 3.82
595 596 2.964925 GCGTGGCTTCGTGTGTGA 60.965 61.111 4.88 0.00 0.00 3.58
596 597 2.943345 GCGTGGCTTCGTGTGTGAG 61.943 63.158 4.88 0.00 0.00 3.51
597 598 2.310233 CGTGGCTTCGTGTGTGAGG 61.310 63.158 0.00 0.00 0.00 3.86
598 599 2.280797 TGGCTTCGTGTGTGAGGC 60.281 61.111 0.00 0.00 39.99 4.70
599 600 2.031163 GGCTTCGTGTGTGAGGCT 59.969 61.111 0.00 0.00 40.50 4.58
600 601 1.292223 GGCTTCGTGTGTGAGGCTA 59.708 57.895 0.00 0.00 40.50 3.93
601 602 0.737715 GGCTTCGTGTGTGAGGCTAG 60.738 60.000 0.00 0.00 40.50 3.42
602 603 0.737715 GCTTCGTGTGTGAGGCTAGG 60.738 60.000 0.00 0.00 37.91 3.02
603 604 0.108615 CTTCGTGTGTGAGGCTAGGG 60.109 60.000 0.00 0.00 0.00 3.53
604 605 0.830444 TTCGTGTGTGAGGCTAGGGT 60.830 55.000 0.00 0.00 0.00 4.34
605 606 0.830444 TCGTGTGTGAGGCTAGGGTT 60.830 55.000 0.00 0.00 0.00 4.11
614 615 0.608640 AGGCTAGGGTTTCGTGTCAG 59.391 55.000 0.00 0.00 0.00 3.51
632 633 2.744709 ACGATGCGAAAACCCGGG 60.745 61.111 22.25 22.25 0.00 5.73
633 634 3.505184 CGATGCGAAAACCCGGGG 61.505 66.667 27.92 12.73 0.00 5.73
634 635 2.045731 GATGCGAAAACCCGGGGA 60.046 61.111 27.92 0.00 0.00 4.81
638 639 3.053896 CGAAAACCCGGGGAGCAC 61.054 66.667 27.92 11.02 0.00 4.40
639 640 2.434774 GAAAACCCGGGGAGCACT 59.565 61.111 27.92 0.00 0.00 4.40
671 672 2.814604 CCGGGATCGATGACTGCA 59.185 61.111 0.54 0.00 39.00 4.41
672 673 1.592669 CCGGGATCGATGACTGCAC 60.593 63.158 0.54 0.00 39.00 4.57
674 675 1.437573 GGGATCGATGACTGCACGA 59.562 57.895 0.54 0.00 40.18 4.35
675 676 0.596083 GGGATCGATGACTGCACGAG 60.596 60.000 0.54 0.00 39.31 4.18
676 677 1.211818 GGATCGATGACTGCACGAGC 61.212 60.000 0.54 3.59 40.79 5.03
788 790 1.477295 AACGATTCCTCGGTCTTCTCC 59.523 52.381 0.00 0.00 42.34 3.71
816 819 1.718396 ACACGCAGATGTGATGTGAG 58.282 50.000 18.39 0.00 42.55 3.51
822 825 3.427098 CGCAGATGTGATGTGAGCATTTT 60.427 43.478 0.00 0.00 35.07 1.82
885 907 1.822371 TGCACGGCTTGTCTGATACTA 59.178 47.619 0.00 0.00 0.00 1.82
932 2669 9.480053 CTTTTTCTTTTTCCTGAAGCATATGAA 57.520 29.630 6.97 0.00 0.00 2.57
988 5487 2.249743 TCCTATAAAACCCCTACCCCGA 59.750 50.000 0.00 0.00 0.00 5.14
1053 5569 0.319728 GACTCAGACCAGCAGCTCAA 59.680 55.000 0.00 0.00 0.00 3.02
1109 5633 1.069978 TCCACAACATCGTCTTGCTCA 59.930 47.619 0.00 0.00 0.00 4.26
1483 6046 1.594293 CGTGTGGTGACTGGTGACC 60.594 63.158 0.00 0.00 37.37 4.02
1486 6051 1.118965 TGTGGTGACTGGTGACCGAT 61.119 55.000 0.00 0.00 39.87 4.18
1488 6053 1.153823 GGTGACTGGTGACCGATCG 60.154 63.158 8.51 8.51 0.00 3.69
1596 6185 2.504274 AACTGGTCTTCCGGACGCA 61.504 57.895 1.83 0.00 45.35 5.24
1781 6407 9.204570 TGACTGTAGTTAGAAGAAATTTGTAGC 57.795 33.333 0.00 0.00 0.00 3.58
1804 6433 7.044181 AGCGATTAGTTCAAGATGAAGATGAA 58.956 34.615 0.00 0.00 37.00 2.57
1856 6485 1.335810 CATTCCTTGCCGGTGATGATG 59.664 52.381 1.90 0.00 32.68 3.07
1869 6503 3.003068 GGTGATGATGAAGAATTGCTCCG 59.997 47.826 0.00 0.00 0.00 4.63
1905 6539 6.073058 TCACTTTCTAATTGTCTGTCATGTGC 60.073 38.462 0.00 0.00 0.00 4.57
1920 6554 3.253921 TCATGTGCTTCAACTCATTGGTG 59.746 43.478 0.00 0.00 36.39 4.17
1995 6636 6.234920 TCCTATCTCTCCATCGACTTAGAAG 58.765 44.000 0.00 0.00 0.00 2.85
2060 6701 6.916387 CGAGATCACATGTTACTTATACGGTT 59.084 38.462 0.00 0.00 0.00 4.44
2061 6702 7.434307 CGAGATCACATGTTACTTATACGGTTT 59.566 37.037 0.00 0.00 0.00 3.27
2064 6705 7.354025 TCACATGTTACTTATACGGTTTGTG 57.646 36.000 0.00 0.00 33.77 3.33
2085 6737 2.209315 GGAGGCCAAAGCTTTGCCA 61.209 57.895 34.14 0.00 39.73 4.92
2092 6744 1.203052 CCAAAGCTTTGCCACATCGAT 59.797 47.619 29.93 0.00 36.86 3.59
2106 6758 7.864686 TGCCACATCGATTAATTATGAAGAAG 58.135 34.615 15.06 4.23 0.00 2.85
2248 6946 5.515270 TCACATGCGACTTAAAATCTACTCG 59.485 40.000 0.00 0.00 0.00 4.18
2249 6947 4.804139 ACATGCGACTTAAAATCTACTCGG 59.196 41.667 0.00 0.00 0.00 4.63
2250 6948 4.707030 TGCGACTTAAAATCTACTCGGA 57.293 40.909 0.00 0.00 0.00 4.55
2315 7166 8.570068 ACCAAAAACGTCTTACATTATGGTAT 57.430 30.769 0.00 0.00 35.79 2.73
2371 7370 2.052690 GGCTACGTGGCAGAGAGGA 61.053 63.158 25.79 0.00 41.37 3.71
2477 8240 7.465353 GAGTTAACTACTCCCTCTGTAAACT 57.535 40.000 8.42 0.00 46.30 2.66
2478 8241 8.572855 GAGTTAACTACTCCCTCTGTAAACTA 57.427 38.462 8.42 0.00 46.30 2.24
2479 8242 8.946797 AGTTAACTACTCCCTCTGTAAACTAA 57.053 34.615 6.26 0.00 28.23 2.24
2480 8243 9.544579 AGTTAACTACTCCCTCTGTAAACTAAT 57.455 33.333 6.26 0.00 28.23 1.73
2488 8251 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2489 8252 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2490 8253 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
2491 8254 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
2492 8255 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
2540 8303 8.571461 AACGCTCTTATATTAGTTTACGAAGG 57.429 34.615 0.00 0.00 0.00 3.46
2541 8304 7.144000 ACGCTCTTATATTAGTTTACGAAGGG 58.856 38.462 0.00 0.00 0.00 3.95
2542 8305 7.013655 ACGCTCTTATATTAGTTTACGAAGGGA 59.986 37.037 0.00 0.00 0.00 4.20
2543 8306 7.537991 CGCTCTTATATTAGTTTACGAAGGGAG 59.462 40.741 0.00 0.00 0.00 4.30
2544 8307 8.358895 GCTCTTATATTAGTTTACGAAGGGAGT 58.641 37.037 0.00 0.00 0.00 3.85
2545 8308 9.680315 CTCTTATATTAGTTTACGAAGGGAGTG 57.320 37.037 0.00 0.00 0.00 3.51
2548 8311 4.796038 TTAGTTTACGAAGGGAGTGGAG 57.204 45.455 0.00 0.00 0.00 3.86
2569 8332 9.827411 GTGGAGACTAAAACAAATCAAGTATTC 57.173 33.333 0.00 0.00 0.00 1.75
2608 8373 4.978083 TGAGGTGAATAGACCGACTTAC 57.022 45.455 0.00 0.00 41.35 2.34
2618 8383 2.497770 CGACTTACGGCGGGGAAT 59.502 61.111 13.24 0.00 38.46 3.01
2619 8384 1.590792 CGACTTACGGCGGGGAATC 60.591 63.158 13.24 0.85 38.46 2.52
2673 8438 1.736645 CCTTCGCACCGTACCACTG 60.737 63.158 0.00 0.00 0.00 3.66
2675 8440 0.241749 CTTCGCACCGTACCACTGTA 59.758 55.000 0.00 0.00 0.00 2.74
2775 8570 7.754924 GTCAATATGACAATCGTGACCAAAAAT 59.245 33.333 5.65 0.00 46.22 1.82
2787 8590 3.071479 GACCAAAAATGGCACTAGTCGA 58.929 45.455 0.00 0.00 0.00 4.20
2791 8594 4.634004 CCAAAAATGGCACTAGTCGACATA 59.366 41.667 19.50 6.45 0.00 2.29
2794 8597 4.937201 AATGGCACTAGTCGACATATCA 57.063 40.909 19.50 8.40 0.00 2.15
2821 8625 6.591062 GCCACATCATCTTAATTTTTGAAGCA 59.409 34.615 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.984570 CCCTCTCGTCTTGGGAGCA 60.985 63.158 0.00 0.00 43.47 4.26
1 2 1.682684 TCCCTCTCGTCTTGGGAGC 60.683 63.158 0.00 0.00 44.37 4.70
4 5 1.205893 CTTCTTCCCTCTCGTCTTGGG 59.794 57.143 0.00 0.00 42.20 4.12
5 6 2.165437 CTCTTCTTCCCTCTCGTCTTGG 59.835 54.545 0.00 0.00 0.00 3.61
6 7 3.085533 TCTCTTCTTCCCTCTCGTCTTG 58.914 50.000 0.00 0.00 0.00 3.02
7 8 3.086282 GTCTCTTCTTCCCTCTCGTCTT 58.914 50.000 0.00 0.00 0.00 3.01
8 9 2.619590 GGTCTCTTCTTCCCTCTCGTCT 60.620 54.545 0.00 0.00 0.00 4.18
9 10 1.746787 GGTCTCTTCTTCCCTCTCGTC 59.253 57.143 0.00 0.00 0.00 4.20
10 11 1.356398 AGGTCTCTTCTTCCCTCTCGT 59.644 52.381 0.00 0.00 0.00 4.18
11 12 2.137810 AGGTCTCTTCTTCCCTCTCG 57.862 55.000 0.00 0.00 0.00 4.04
12 13 3.562182 CCTAGGTCTCTTCTTCCCTCTC 58.438 54.545 0.00 0.00 0.00 3.20
13 14 2.246327 CCCTAGGTCTCTTCTTCCCTCT 59.754 54.545 8.29 0.00 0.00 3.69
14 15 2.673258 CCCTAGGTCTCTTCTTCCCTC 58.327 57.143 8.29 0.00 0.00 4.30
15 16 1.292546 CCCCTAGGTCTCTTCTTCCCT 59.707 57.143 8.29 0.00 0.00 4.20
16 17 1.291335 TCCCCTAGGTCTCTTCTTCCC 59.709 57.143 8.29 0.00 0.00 3.97
17 18 2.850695 TCCCCTAGGTCTCTTCTTCC 57.149 55.000 8.29 0.00 0.00 3.46
18 19 3.119065 CGTTTCCCCTAGGTCTCTTCTTC 60.119 52.174 8.29 0.00 0.00 2.87
19 20 2.832733 CGTTTCCCCTAGGTCTCTTCTT 59.167 50.000 8.29 0.00 0.00 2.52
20 21 2.458620 CGTTTCCCCTAGGTCTCTTCT 58.541 52.381 8.29 0.00 0.00 2.85
21 22 1.134759 GCGTTTCCCCTAGGTCTCTTC 60.135 57.143 8.29 0.00 0.00 2.87
22 23 0.903236 GCGTTTCCCCTAGGTCTCTT 59.097 55.000 8.29 0.00 0.00 2.85
23 24 0.976590 GGCGTTTCCCCTAGGTCTCT 60.977 60.000 8.29 0.00 0.00 3.10
24 25 1.521141 GGCGTTTCCCCTAGGTCTC 59.479 63.158 8.29 0.00 0.00 3.36
25 26 3.723245 GGCGTTTCCCCTAGGTCT 58.277 61.111 8.29 0.00 0.00 3.85
101 102 2.482333 ATTCTCCTCCCTCGTCGCG 61.482 63.158 0.00 0.00 0.00 5.87
102 103 1.066587 CATTCTCCTCCCTCGTCGC 59.933 63.158 0.00 0.00 0.00 5.19
103 104 1.736586 CCATTCTCCTCCCTCGTCG 59.263 63.158 0.00 0.00 0.00 5.12
104 105 0.397254 TCCCATTCTCCTCCCTCGTC 60.397 60.000 0.00 0.00 0.00 4.20
105 106 0.397816 CTCCCATTCTCCTCCCTCGT 60.398 60.000 0.00 0.00 0.00 4.18
106 107 1.118356 CCTCCCATTCTCCTCCCTCG 61.118 65.000 0.00 0.00 0.00 4.63
107 108 0.766288 CCCTCCCATTCTCCTCCCTC 60.766 65.000 0.00 0.00 0.00 4.30
108 109 1.319799 CCCTCCCATTCTCCTCCCT 59.680 63.158 0.00 0.00 0.00 4.20
109 110 2.456443 GCCCTCCCATTCTCCTCCC 61.456 68.421 0.00 0.00 0.00 4.30
110 111 2.812619 CGCCCTCCCATTCTCCTCC 61.813 68.421 0.00 0.00 0.00 4.30
111 112 2.812619 CCGCCCTCCCATTCTCCTC 61.813 68.421 0.00 0.00 0.00 3.71
112 113 2.770048 CCGCCCTCCCATTCTCCT 60.770 66.667 0.00 0.00 0.00 3.69
113 114 3.090532 ACCGCCCTCCCATTCTCC 61.091 66.667 0.00 0.00 0.00 3.71
114 115 2.190578 CACCGCCCTCCCATTCTC 59.809 66.667 0.00 0.00 0.00 2.87
115 116 3.411517 CCACCGCCCTCCCATTCT 61.412 66.667 0.00 0.00 0.00 2.40
116 117 4.506255 CCCACCGCCCTCCCATTC 62.506 72.222 0.00 0.00 0.00 2.67
128 129 4.394712 CTCCCAGCGACACCCACC 62.395 72.222 0.00 0.00 0.00 4.61
129 130 3.591254 GACTCCCAGCGACACCCAC 62.591 68.421 0.00 0.00 0.00 4.61
130 131 3.311110 GACTCCCAGCGACACCCA 61.311 66.667 0.00 0.00 0.00 4.51
131 132 4.436998 CGACTCCCAGCGACACCC 62.437 72.222 0.00 0.00 0.00 4.61
153 154 4.135153 CCCTCCTCTGGCGACACG 62.135 72.222 0.00 0.00 35.60 4.49
154 155 4.459089 GCCCTCCTCTGGCGACAC 62.459 72.222 0.00 0.00 39.48 3.67
176 177 4.904590 TGCACCCAACAACCCCCG 62.905 66.667 0.00 0.00 0.00 5.73
177 178 3.230990 GTGCACCCAACAACCCCC 61.231 66.667 5.22 0.00 0.00 5.40
178 179 2.123468 AGTGCACCCAACAACCCC 60.123 61.111 14.63 0.00 0.00 4.95
179 180 1.040339 TTGAGTGCACCCAACAACCC 61.040 55.000 14.63 0.00 0.00 4.11
180 181 0.820871 TTTGAGTGCACCCAACAACC 59.179 50.000 13.91 0.00 0.00 3.77
181 182 1.203523 TGTTTGAGTGCACCCAACAAC 59.796 47.619 13.91 10.80 0.00 3.32
182 183 1.550327 TGTTTGAGTGCACCCAACAA 58.450 45.000 13.91 11.96 0.00 2.83
183 184 1.550327 TTGTTTGAGTGCACCCAACA 58.450 45.000 13.91 16.18 0.00 3.33
184 185 2.094234 AGTTTGTTTGAGTGCACCCAAC 60.094 45.455 13.91 13.85 0.00 3.77
185 186 2.175202 AGTTTGTTTGAGTGCACCCAA 58.825 42.857 14.63 12.23 0.00 4.12
186 187 1.846007 AGTTTGTTTGAGTGCACCCA 58.154 45.000 14.63 4.63 0.00 4.51
187 188 2.959507 AAGTTTGTTTGAGTGCACCC 57.040 45.000 14.63 0.92 0.00 4.61
188 189 3.066760 AGCTAAGTTTGTTTGAGTGCACC 59.933 43.478 14.63 5.76 0.00 5.01
189 190 4.292977 AGCTAAGTTTGTTTGAGTGCAC 57.707 40.909 9.40 9.40 0.00 4.57
190 191 4.024048 GCTAGCTAAGTTTGTTTGAGTGCA 60.024 41.667 7.70 0.00 0.00 4.57
191 192 4.024048 TGCTAGCTAAGTTTGTTTGAGTGC 60.024 41.667 17.23 0.00 0.00 4.40
192 193 5.673337 TGCTAGCTAAGTTTGTTTGAGTG 57.327 39.130 17.23 0.00 0.00 3.51
193 194 5.335191 GCATGCTAGCTAAGTTTGTTTGAGT 60.335 40.000 17.23 0.00 0.00 3.41
194 195 5.091431 GCATGCTAGCTAAGTTTGTTTGAG 58.909 41.667 17.23 0.00 0.00 3.02
195 196 4.761739 AGCATGCTAGCTAAGTTTGTTTGA 59.238 37.500 21.21 0.00 44.50 2.69
196 197 5.051891 AGCATGCTAGCTAAGTTTGTTTG 57.948 39.130 21.21 0.00 44.50 2.93
197 198 5.712152 AAGCATGCTAGCTAAGTTTGTTT 57.288 34.783 23.00 0.00 45.89 2.83
198 199 5.712152 AAAGCATGCTAGCTAAGTTTGTT 57.288 34.783 23.00 3.62 45.89 2.83
199 200 5.712152 AAAAGCATGCTAGCTAAGTTTGT 57.288 34.783 23.00 0.00 45.89 2.83
200 201 8.519492 TTTAAAAAGCATGCTAGCTAAGTTTG 57.481 30.769 23.00 5.31 45.89 2.93
201 202 9.710900 ATTTTAAAAAGCATGCTAGCTAAGTTT 57.289 25.926 23.00 12.93 45.89 2.66
202 203 9.710900 AATTTTAAAAAGCATGCTAGCTAAGTT 57.289 25.926 23.00 6.68 45.89 2.66
203 204 9.143631 CAATTTTAAAAAGCATGCTAGCTAAGT 57.856 29.630 23.00 7.41 45.89 2.24
204 205 8.598075 CCAATTTTAAAAAGCATGCTAGCTAAG 58.402 33.333 23.00 6.77 45.89 2.18
205 206 7.548780 CCCAATTTTAAAAAGCATGCTAGCTAA 59.451 33.333 23.00 14.88 45.89 3.09
206 207 7.041107 CCCAATTTTAAAAAGCATGCTAGCTA 58.959 34.615 23.00 9.46 45.89 3.32
208 209 5.065090 CCCCAATTTTAAAAAGCATGCTAGC 59.935 40.000 23.00 8.10 0.00 3.42
209 210 6.405538 TCCCCAATTTTAAAAAGCATGCTAG 58.594 36.000 23.00 1.14 0.00 3.42
210 211 6.212388 TCTCCCCAATTTTAAAAAGCATGCTA 59.788 34.615 23.00 3.08 0.00 3.49
211 212 5.012975 TCTCCCCAATTTTAAAAAGCATGCT 59.987 36.000 16.30 16.30 0.00 3.79
212 213 5.244755 TCTCCCCAATTTTAAAAAGCATGC 58.755 37.500 10.51 10.51 0.00 4.06
213 214 7.926674 ATTCTCCCCAATTTTAAAAAGCATG 57.073 32.000 4.44 2.65 0.00 4.06
214 215 8.938801 AAATTCTCCCCAATTTTAAAAAGCAT 57.061 26.923 4.44 0.00 33.02 3.79
215 216 7.995488 TGAAATTCTCCCCAATTTTAAAAAGCA 59.005 29.630 4.44 0.00 36.33 3.91
216 217 8.289618 GTGAAATTCTCCCCAATTTTAAAAAGC 58.710 33.333 4.44 0.00 36.33 3.51
217 218 9.559732 AGTGAAATTCTCCCCAATTTTAAAAAG 57.440 29.630 4.44 0.98 36.33 2.27
218 219 9.913310 AAGTGAAATTCTCCCCAATTTTAAAAA 57.087 25.926 4.44 0.00 36.33 1.94
219 220 9.554395 GAAGTGAAATTCTCCCCAATTTTAAAA 57.446 29.630 2.51 2.51 36.33 1.52
220 221 8.154203 GGAAGTGAAATTCTCCCCAATTTTAAA 58.846 33.333 0.00 0.00 36.33 1.52
221 222 7.256511 GGGAAGTGAAATTCTCCCCAATTTTAA 60.257 37.037 7.38 0.00 36.33 1.52
222 223 6.212589 GGGAAGTGAAATTCTCCCCAATTTTA 59.787 38.462 7.38 0.00 36.33 1.52
223 224 5.013079 GGGAAGTGAAATTCTCCCCAATTTT 59.987 40.000 7.38 0.00 36.33 1.82
224 225 4.532126 GGGAAGTGAAATTCTCCCCAATTT 59.468 41.667 7.38 0.00 38.43 1.82
225 226 4.096681 GGGAAGTGAAATTCTCCCCAATT 58.903 43.478 7.38 0.00 32.77 2.32
226 227 3.713003 GGGAAGTGAAATTCTCCCCAAT 58.287 45.455 7.38 0.00 32.77 3.16
227 228 3.169512 GGGAAGTGAAATTCTCCCCAA 57.830 47.619 7.38 0.00 32.77 4.12
228 229 2.899303 GGGAAGTGAAATTCTCCCCA 57.101 50.000 7.38 0.00 32.77 4.96
229 230 1.682087 CGGGGAAGTGAAATTCTCCCC 60.682 57.143 21.69 21.69 45.66 4.81
230 231 1.682087 CCGGGGAAGTGAAATTCTCCC 60.682 57.143 9.59 9.59 45.66 4.30
231 232 1.751437 CCGGGGAAGTGAAATTCTCC 58.249 55.000 0.00 0.00 45.08 3.71
232 233 1.095600 GCCGGGGAAGTGAAATTCTC 58.904 55.000 2.18 0.00 0.00 2.87
233 234 0.323451 GGCCGGGGAAGTGAAATTCT 60.323 55.000 2.18 0.00 0.00 2.40
234 235 0.323451 AGGCCGGGGAAGTGAAATTC 60.323 55.000 2.18 0.00 0.00 2.17
235 236 0.323451 GAGGCCGGGGAAGTGAAATT 60.323 55.000 2.18 0.00 0.00 1.82
236 237 1.208165 AGAGGCCGGGGAAGTGAAAT 61.208 55.000 2.18 0.00 0.00 2.17
237 238 1.846124 AGAGGCCGGGGAAGTGAAA 60.846 57.895 2.18 0.00 0.00 2.69
238 239 2.203938 AGAGGCCGGGGAAGTGAA 60.204 61.111 2.18 0.00 0.00 3.18
239 240 3.003173 CAGAGGCCGGGGAAGTGA 61.003 66.667 2.18 0.00 0.00 3.41
240 241 4.785453 GCAGAGGCCGGGGAAGTG 62.785 72.222 2.18 0.00 0.00 3.16
242 243 4.785453 GTGCAGAGGCCGGGGAAG 62.785 72.222 2.18 0.00 40.13 3.46
247 248 2.859273 CTAGTTGGTGCAGAGGCCGG 62.859 65.000 0.00 0.00 40.13 6.13
248 249 1.448540 CTAGTTGGTGCAGAGGCCG 60.449 63.158 0.00 0.00 40.13 6.13
249 250 1.078143 CCTAGTTGGTGCAGAGGCC 60.078 63.158 0.00 0.00 40.13 5.19
250 251 1.078143 CCCTAGTTGGTGCAGAGGC 60.078 63.158 0.00 0.00 41.68 4.70
251 252 1.134280 CATCCCTAGTTGGTGCAGAGG 60.134 57.143 0.00 0.00 0.00 3.69
252 253 1.745141 GCATCCCTAGTTGGTGCAGAG 60.745 57.143 9.27 0.00 34.56 3.35
253 254 0.253044 GCATCCCTAGTTGGTGCAGA 59.747 55.000 9.27 0.00 34.56 4.26
254 255 0.035152 TGCATCCCTAGTTGGTGCAG 60.035 55.000 12.10 0.00 37.44 4.41
255 256 0.625316 ATGCATCCCTAGTTGGTGCA 59.375 50.000 16.90 16.90 42.44 4.57
256 257 2.222027 GTATGCATCCCTAGTTGGTGC 58.778 52.381 0.19 7.60 34.81 5.01
257 258 2.483876 CGTATGCATCCCTAGTTGGTG 58.516 52.381 0.19 0.00 0.00 4.17
258 259 1.416401 CCGTATGCATCCCTAGTTGGT 59.584 52.381 0.19 0.00 0.00 3.67
259 260 1.878102 GCCGTATGCATCCCTAGTTGG 60.878 57.143 0.19 0.00 40.77 3.77
260 261 1.512926 GCCGTATGCATCCCTAGTTG 58.487 55.000 0.19 0.00 40.77 3.16
261 262 0.396811 GGCCGTATGCATCCCTAGTT 59.603 55.000 0.19 0.00 43.89 2.24
262 263 0.762842 TGGCCGTATGCATCCCTAGT 60.763 55.000 0.19 0.00 43.89 2.57
263 264 0.615331 ATGGCCGTATGCATCCCTAG 59.385 55.000 0.19 0.00 43.89 3.02
264 265 1.064003 AATGGCCGTATGCATCCCTA 58.936 50.000 0.19 0.00 43.89 3.53
265 266 0.185901 AAATGGCCGTATGCATCCCT 59.814 50.000 0.19 0.00 43.89 4.20
266 267 1.039856 AAAATGGCCGTATGCATCCC 58.960 50.000 0.19 0.18 43.89 3.85
267 268 2.884639 ACTAAAATGGCCGTATGCATCC 59.115 45.455 0.19 0.00 43.89 3.51
268 269 5.411361 TCATACTAAAATGGCCGTATGCATC 59.589 40.000 16.90 0.00 43.89 3.91
269 270 5.312895 TCATACTAAAATGGCCGTATGCAT 58.687 37.500 16.90 3.79 43.89 3.96
270 271 4.709250 TCATACTAAAATGGCCGTATGCA 58.291 39.130 16.90 0.00 43.89 3.96
271 272 4.755123 ACTCATACTAAAATGGCCGTATGC 59.245 41.667 16.90 0.00 39.17 3.14
272 273 6.367969 GGTACTCATACTAAAATGGCCGTATG 59.632 42.308 16.02 16.02 40.13 2.39
273 274 6.042322 TGGTACTCATACTAAAATGGCCGTAT 59.958 38.462 0.00 0.00 0.00 3.06
274 275 5.363292 TGGTACTCATACTAAAATGGCCGTA 59.637 40.000 0.00 0.00 0.00 4.02
275 276 4.162698 TGGTACTCATACTAAAATGGCCGT 59.837 41.667 0.00 0.00 0.00 5.68
276 277 4.699637 TGGTACTCATACTAAAATGGCCG 58.300 43.478 0.00 0.00 0.00 6.13
277 278 7.399245 TTTTGGTACTCATACTAAAATGGCC 57.601 36.000 0.00 0.00 43.10 5.36
286 287 9.174166 GACCATGTTTATTTTGGTACTCATACT 57.826 33.333 0.00 0.00 43.67 2.12
287 288 8.403236 GGACCATGTTTATTTTGGTACTCATAC 58.597 37.037 0.00 0.00 43.67 2.39
288 289 8.514330 GGACCATGTTTATTTTGGTACTCATA 57.486 34.615 0.00 0.00 43.67 2.15
289 290 7.404671 GGACCATGTTTATTTTGGTACTCAT 57.595 36.000 0.00 0.00 43.67 2.90
290 291 6.827586 GGACCATGTTTATTTTGGTACTCA 57.172 37.500 0.00 0.00 43.67 3.41
293 294 6.657541 TCTGAGGACCATGTTTATTTTGGTAC 59.342 38.462 0.00 0.00 43.67 3.34
294 295 6.785076 TCTGAGGACCATGTTTATTTTGGTA 58.215 36.000 0.00 0.00 43.67 3.25
295 296 5.640147 TCTGAGGACCATGTTTATTTTGGT 58.360 37.500 0.00 0.00 46.24 3.67
296 297 6.588719 TTCTGAGGACCATGTTTATTTTGG 57.411 37.500 0.00 0.00 36.56 3.28
297 298 9.492973 AAAATTCTGAGGACCATGTTTATTTTG 57.507 29.630 0.00 0.00 0.00 2.44
357 358 5.508200 TCAAGTTTGGTGTATGGTGAAAC 57.492 39.130 0.00 0.00 0.00 2.78
358 359 5.242838 GGATCAAGTTTGGTGTATGGTGAAA 59.757 40.000 0.00 0.00 0.00 2.69
359 360 4.764823 GGATCAAGTTTGGTGTATGGTGAA 59.235 41.667 0.00 0.00 0.00 3.18
360 361 4.042809 AGGATCAAGTTTGGTGTATGGTGA 59.957 41.667 0.00 0.00 0.00 4.02
361 362 4.335416 AGGATCAAGTTTGGTGTATGGTG 58.665 43.478 0.00 0.00 0.00 4.17
362 363 4.042809 TGAGGATCAAGTTTGGTGTATGGT 59.957 41.667 0.00 0.00 45.97 3.55
363 364 4.588899 TGAGGATCAAGTTTGGTGTATGG 58.411 43.478 0.00 0.00 45.97 2.74
393 394 0.250338 GACGCACAAGAGGTTTCCCT 60.250 55.000 0.00 0.00 46.66 4.20
394 395 0.534203 TGACGCACAAGAGGTTTCCC 60.534 55.000 0.00 0.00 0.00 3.97
395 396 1.464997 GATGACGCACAAGAGGTTTCC 59.535 52.381 0.00 0.00 0.00 3.13
396 397 2.158449 CAGATGACGCACAAGAGGTTTC 59.842 50.000 0.00 0.00 0.00 2.78
397 398 2.146342 CAGATGACGCACAAGAGGTTT 58.854 47.619 0.00 0.00 0.00 3.27
398 399 1.070758 ACAGATGACGCACAAGAGGTT 59.929 47.619 0.00 0.00 0.00 3.50
399 400 0.681733 ACAGATGACGCACAAGAGGT 59.318 50.000 0.00 0.00 0.00 3.85
400 401 1.073964 CACAGATGACGCACAAGAGG 58.926 55.000 0.00 0.00 0.00 3.69
401 402 2.070262 TCACAGATGACGCACAAGAG 57.930 50.000 0.00 0.00 0.00 2.85
402 403 2.524569 TTCACAGATGACGCACAAGA 57.475 45.000 0.00 0.00 33.38 3.02
403 404 3.818961 AATTCACAGATGACGCACAAG 57.181 42.857 0.00 0.00 33.38 3.16
404 405 4.566545 AAAATTCACAGATGACGCACAA 57.433 36.364 0.00 0.00 33.38 3.33
405 406 5.468409 TCTTAAAATTCACAGATGACGCACA 59.532 36.000 0.00 0.00 33.38 4.57
406 407 5.927030 TCTTAAAATTCACAGATGACGCAC 58.073 37.500 0.00 0.00 33.38 5.34
407 408 6.552859 TTCTTAAAATTCACAGATGACGCA 57.447 33.333 0.00 0.00 33.38 5.24
408 409 9.554724 TTAATTCTTAAAATTCACAGATGACGC 57.445 29.630 0.00 0.00 33.38 5.19
415 416 9.341899 CCCGAGTTTAATTCTTAAAATTCACAG 57.658 33.333 0.00 0.00 36.91 3.66
416 417 8.852135 ACCCGAGTTTAATTCTTAAAATTCACA 58.148 29.630 0.00 0.00 36.91 3.58
417 418 9.338291 GACCCGAGTTTAATTCTTAAAATTCAC 57.662 33.333 0.00 0.00 36.91 3.18
418 419 8.231837 CGACCCGAGTTTAATTCTTAAAATTCA 58.768 33.333 0.00 0.00 36.91 2.57
419 420 8.232513 ACGACCCGAGTTTAATTCTTAAAATTC 58.767 33.333 0.00 0.00 36.91 2.17
420 421 8.102800 ACGACCCGAGTTTAATTCTTAAAATT 57.897 30.769 0.00 0.00 36.91 1.82
421 422 7.677454 ACGACCCGAGTTTAATTCTTAAAAT 57.323 32.000 0.00 0.00 36.91 1.82
422 423 7.495135 AACGACCCGAGTTTAATTCTTAAAA 57.505 32.000 0.00 0.00 36.91 1.52
423 424 7.331687 CCTAACGACCCGAGTTTAATTCTTAAA 59.668 37.037 0.00 0.00 33.42 1.52
424 425 6.813152 CCTAACGACCCGAGTTTAATTCTTAA 59.187 38.462 0.00 0.00 33.42 1.85
425 426 6.332630 CCTAACGACCCGAGTTTAATTCTTA 58.667 40.000 0.00 0.00 33.42 2.10
426 427 5.173664 CCTAACGACCCGAGTTTAATTCTT 58.826 41.667 0.00 0.00 33.42 2.52
427 428 4.752146 CCTAACGACCCGAGTTTAATTCT 58.248 43.478 0.00 0.00 33.42 2.40
428 429 3.308053 GCCTAACGACCCGAGTTTAATTC 59.692 47.826 0.00 0.00 33.42 2.17
429 430 3.055602 AGCCTAACGACCCGAGTTTAATT 60.056 43.478 0.00 0.00 33.42 1.40
430 431 2.498885 AGCCTAACGACCCGAGTTTAAT 59.501 45.455 0.00 0.00 33.42 1.40
431 432 1.895131 AGCCTAACGACCCGAGTTTAA 59.105 47.619 0.00 0.00 33.42 1.52
432 433 1.203052 CAGCCTAACGACCCGAGTTTA 59.797 52.381 0.00 0.00 33.42 2.01
433 434 0.037605 CAGCCTAACGACCCGAGTTT 60.038 55.000 0.00 0.00 33.42 2.66
434 435 1.590147 CAGCCTAACGACCCGAGTT 59.410 57.895 0.00 0.00 35.75 3.01
435 436 3.003113 GCAGCCTAACGACCCGAGT 62.003 63.158 0.00 0.00 0.00 4.18
436 437 2.202756 GCAGCCTAACGACCCGAG 60.203 66.667 0.00 0.00 0.00 4.63
437 438 2.992689 TGCAGCCTAACGACCCGA 60.993 61.111 0.00 0.00 0.00 5.14
438 439 2.813908 GTGCAGCCTAACGACCCG 60.814 66.667 0.00 0.00 0.00 5.28
439 440 1.302192 TTGTGCAGCCTAACGACCC 60.302 57.895 0.00 0.00 0.00 4.46
440 441 1.574702 GGTTGTGCAGCCTAACGACC 61.575 60.000 5.25 5.25 42.26 4.79
441 442 1.866925 GGTTGTGCAGCCTAACGAC 59.133 57.895 0.00 0.00 0.00 4.34
442 443 1.666553 CGGTTGTGCAGCCTAACGA 60.667 57.895 3.70 0.00 0.00 3.85
443 444 2.860293 CGGTTGTGCAGCCTAACG 59.140 61.111 3.70 0.00 0.00 3.18
444 445 2.258013 TGCGGTTGTGCAGCCTAAC 61.258 57.895 3.70 0.00 40.62 2.34
445 446 2.112087 TGCGGTTGTGCAGCCTAA 59.888 55.556 3.70 0.00 40.62 2.69
452 453 3.988525 TTGGGCATGCGGTTGTGC 61.989 61.111 12.44 0.00 40.55 4.57
453 454 2.049248 GTTGGGCATGCGGTTGTG 60.049 61.111 12.44 0.00 0.00 3.33
454 455 3.302344 GGTTGGGCATGCGGTTGT 61.302 61.111 12.44 0.00 0.00 3.32
455 456 3.301554 TGGTTGGGCATGCGGTTG 61.302 61.111 12.44 0.00 0.00 3.77
456 457 3.302344 GTGGTTGGGCATGCGGTT 61.302 61.111 12.44 0.00 0.00 4.44
457 458 4.284550 AGTGGTTGGGCATGCGGT 62.285 61.111 12.44 0.00 0.00 5.68
458 459 3.751246 CAGTGGTTGGGCATGCGG 61.751 66.667 12.44 0.00 0.00 5.69
459 460 2.672651 TCAGTGGTTGGGCATGCG 60.673 61.111 12.44 0.00 0.00 4.73
460 461 3.281240 CTCAGTGGTTGGGCATGC 58.719 61.111 9.90 9.90 0.00 4.06
465 466 1.604593 CCTTGGCTCAGTGGTTGGG 60.605 63.158 0.00 0.00 0.00 4.12
466 467 2.270986 GCCTTGGCTCAGTGGTTGG 61.271 63.158 4.11 0.00 0.00 3.77
467 468 1.228367 AGCCTTGGCTCAGTGGTTG 60.228 57.895 8.56 0.00 0.00 3.77
468 469 1.073897 GAGCCTTGGCTCAGTGGTT 59.926 57.895 30.25 1.25 36.86 3.67
469 470 1.835927 GAGAGCCTTGGCTCAGTGGT 61.836 60.000 34.40 19.17 39.13 4.16
470 471 1.078567 GAGAGCCTTGGCTCAGTGG 60.079 63.158 34.40 0.00 39.13 4.00
471 472 0.324285 AAGAGAGCCTTGGCTCAGTG 59.676 55.000 34.40 0.00 39.13 3.66
472 473 1.063183 AAAGAGAGCCTTGGCTCAGT 58.937 50.000 34.40 22.13 39.13 3.41
473 474 1.451067 CAAAGAGAGCCTTGGCTCAG 58.549 55.000 34.40 18.91 39.13 3.35
474 475 0.607489 GCAAAGAGAGCCTTGGCTCA 60.607 55.000 34.40 0.00 46.15 4.26
475 476 2.178856 GCAAAGAGAGCCTTGGCTC 58.821 57.895 28.67 28.67 46.15 4.70
476 477 4.412075 GCAAAGAGAGCCTTGGCT 57.588 55.556 14.69 14.69 46.15 4.75
483 484 1.676967 CTGTGGGGGCAAAGAGAGC 60.677 63.158 0.00 0.00 0.00 4.09
484 485 1.676967 GCTGTGGGGGCAAAGAGAG 60.677 63.158 0.00 0.00 0.00 3.20
485 486 2.005606 TTGCTGTGGGGGCAAAGAGA 62.006 55.000 0.00 0.00 45.05 3.10
486 487 1.531365 TTGCTGTGGGGGCAAAGAG 60.531 57.895 0.00 0.00 45.05 2.85
487 488 2.605873 TTGCTGTGGGGGCAAAGA 59.394 55.556 0.00 0.00 45.05 2.52
491 492 4.617556 TGCATTGCTGTGGGGGCA 62.618 61.111 10.49 0.00 37.97 5.36
492 493 4.073200 GTGCATTGCTGTGGGGGC 62.073 66.667 10.49 0.00 0.00 5.80
493 494 3.751246 CGTGCATTGCTGTGGGGG 61.751 66.667 10.49 0.00 0.00 5.40
494 495 1.647545 CTACGTGCATTGCTGTGGGG 61.648 60.000 10.49 1.25 0.00 4.96
495 496 0.673333 TCTACGTGCATTGCTGTGGG 60.673 55.000 10.49 6.63 0.00 4.61
496 497 1.372582 ATCTACGTGCATTGCTGTGG 58.627 50.000 10.49 10.34 0.00 4.17
497 498 2.535534 CGAATCTACGTGCATTGCTGTG 60.536 50.000 10.49 2.21 0.00 3.66
498 499 1.660607 CGAATCTACGTGCATTGCTGT 59.339 47.619 10.49 10.78 0.00 4.40
499 500 1.593070 GCGAATCTACGTGCATTGCTG 60.593 52.381 10.49 5.11 35.59 4.41
500 501 0.652592 GCGAATCTACGTGCATTGCT 59.347 50.000 10.49 0.00 35.59 3.91
501 502 0.316196 GGCGAATCTACGTGCATTGC 60.316 55.000 0.46 0.46 35.59 3.56
502 503 0.304705 GGGCGAATCTACGTGCATTG 59.695 55.000 0.00 0.00 35.59 2.82
503 504 0.814010 GGGGCGAATCTACGTGCATT 60.814 55.000 0.00 0.00 35.59 3.56
504 505 1.227556 GGGGCGAATCTACGTGCAT 60.228 57.895 0.00 0.00 35.59 3.96
505 506 2.185867 GGGGCGAATCTACGTGCA 59.814 61.111 0.00 0.00 35.59 4.57
506 507 1.883084 CAGGGGCGAATCTACGTGC 60.883 63.158 0.00 0.00 35.59 5.34
507 508 1.883084 GCAGGGGCGAATCTACGTG 60.883 63.158 0.00 0.00 35.59 4.49
508 509 2.499685 GCAGGGGCGAATCTACGT 59.500 61.111 0.00 0.00 35.59 3.57
518 519 3.688159 CCAACAAGCAGCAGGGGC 61.688 66.667 0.00 0.00 41.61 5.80
519 520 1.975407 CTCCAACAAGCAGCAGGGG 60.975 63.158 0.00 0.00 0.00 4.79
520 521 1.975407 CCTCCAACAAGCAGCAGGG 60.975 63.158 0.00 0.00 0.00 4.45
521 522 2.633509 GCCTCCAACAAGCAGCAGG 61.634 63.158 0.00 0.00 0.00 4.85
522 523 2.960170 GCCTCCAACAAGCAGCAG 59.040 61.111 0.00 0.00 0.00 4.24
523 524 2.979676 CGCCTCCAACAAGCAGCA 60.980 61.111 0.00 0.00 0.00 4.41
524 525 2.555547 AACGCCTCCAACAAGCAGC 61.556 57.895 0.00 0.00 0.00 5.25
525 526 1.283793 CAACGCCTCCAACAAGCAG 59.716 57.895 0.00 0.00 0.00 4.24
526 527 0.179043 TACAACGCCTCCAACAAGCA 60.179 50.000 0.00 0.00 0.00 3.91
527 528 0.237498 GTACAACGCCTCCAACAAGC 59.763 55.000 0.00 0.00 0.00 4.01
528 529 1.798813 GAGTACAACGCCTCCAACAAG 59.201 52.381 0.00 0.00 0.00 3.16
529 530 1.414919 AGAGTACAACGCCTCCAACAA 59.585 47.619 0.00 0.00 0.00 2.83
530 531 1.000506 GAGAGTACAACGCCTCCAACA 59.999 52.381 0.00 0.00 0.00 3.33
531 532 1.000506 TGAGAGTACAACGCCTCCAAC 59.999 52.381 0.00 0.00 0.00 3.77
532 533 1.000506 GTGAGAGTACAACGCCTCCAA 59.999 52.381 0.00 0.00 0.00 3.53
533 534 0.601558 GTGAGAGTACAACGCCTCCA 59.398 55.000 0.00 0.00 0.00 3.86
534 535 0.108756 GGTGAGAGTACAACGCCTCC 60.109 60.000 0.00 0.00 0.00 4.30
535 536 0.108756 GGGTGAGAGTACAACGCCTC 60.109 60.000 13.33 0.00 34.98 4.70
536 537 0.542232 AGGGTGAGAGTACAACGCCT 60.542 55.000 13.33 0.00 34.98 5.52
537 538 0.389948 CAGGGTGAGAGTACAACGCC 60.390 60.000 0.00 1.91 0.00 5.68
538 539 0.601558 TCAGGGTGAGAGTACAACGC 59.398 55.000 0.00 0.00 0.00 4.84
548 549 1.524482 GGGCTTAGCTCAGGGTGAG 59.476 63.158 3.59 0.00 46.90 3.51
549 550 2.359169 CGGGCTTAGCTCAGGGTGA 61.359 63.158 4.51 0.00 0.00 4.02
550 551 2.187946 CGGGCTTAGCTCAGGGTG 59.812 66.667 4.51 0.00 0.00 4.61
551 552 3.083997 CCGGGCTTAGCTCAGGGT 61.084 66.667 4.51 0.00 0.00 4.34
552 553 2.764128 TCCGGGCTTAGCTCAGGG 60.764 66.667 4.51 0.00 0.00 4.45
553 554 2.801631 CCTCCGGGCTTAGCTCAGG 61.802 68.421 4.51 6.77 0.00 3.86
554 555 2.818132 CCTCCGGGCTTAGCTCAG 59.182 66.667 4.51 0.00 0.00 3.35
573 574 4.374702 CACGAAGCCACGCAGCAC 62.375 66.667 0.00 0.00 36.70 4.40
574 575 4.908687 ACACGAAGCCACGCAGCA 62.909 61.111 0.00 0.00 36.70 4.41
575 576 4.374702 CACACGAAGCCACGCAGC 62.375 66.667 0.00 0.00 36.70 5.25
576 577 2.967076 ACACACGAAGCCACGCAG 60.967 61.111 0.00 0.00 36.70 5.18
577 578 3.268603 CACACACGAAGCCACGCA 61.269 61.111 0.00 0.00 36.70 5.24
578 579 2.943345 CTCACACACGAAGCCACGC 61.943 63.158 0.00 0.00 36.70 5.34
579 580 2.310233 CCTCACACACGAAGCCACG 61.310 63.158 0.00 0.00 39.31 4.94
580 581 2.607892 GCCTCACACACGAAGCCAC 61.608 63.158 0.00 0.00 0.00 5.01
581 582 1.468506 TAGCCTCACACACGAAGCCA 61.469 55.000 0.00 0.00 0.00 4.75
582 583 0.737715 CTAGCCTCACACACGAAGCC 60.738 60.000 0.00 0.00 0.00 4.35
583 584 0.737715 CCTAGCCTCACACACGAAGC 60.738 60.000 0.00 0.00 0.00 3.86
584 585 0.108615 CCCTAGCCTCACACACGAAG 60.109 60.000 0.00 0.00 0.00 3.79
585 586 0.830444 ACCCTAGCCTCACACACGAA 60.830 55.000 0.00 0.00 0.00 3.85
586 587 0.830444 AACCCTAGCCTCACACACGA 60.830 55.000 0.00 0.00 0.00 4.35
587 588 0.034896 AAACCCTAGCCTCACACACG 59.965 55.000 0.00 0.00 0.00 4.49
588 589 1.809684 GAAACCCTAGCCTCACACAC 58.190 55.000 0.00 0.00 0.00 3.82
589 590 0.320374 CGAAACCCTAGCCTCACACA 59.680 55.000 0.00 0.00 0.00 3.72
590 591 0.320697 ACGAAACCCTAGCCTCACAC 59.679 55.000 0.00 0.00 0.00 3.82
591 592 0.320374 CACGAAACCCTAGCCTCACA 59.680 55.000 0.00 0.00 0.00 3.58
592 593 0.320697 ACACGAAACCCTAGCCTCAC 59.679 55.000 0.00 0.00 0.00 3.51
593 594 0.606604 GACACGAAACCCTAGCCTCA 59.393 55.000 0.00 0.00 0.00 3.86
594 595 0.606604 TGACACGAAACCCTAGCCTC 59.393 55.000 0.00 0.00 0.00 4.70
595 596 0.608640 CTGACACGAAACCCTAGCCT 59.391 55.000 0.00 0.00 0.00 4.58
596 597 0.606604 TCTGACACGAAACCCTAGCC 59.393 55.000 0.00 0.00 0.00 3.93
597 598 1.711206 GTCTGACACGAAACCCTAGC 58.289 55.000 2.24 0.00 0.00 3.42
614 615 2.746803 CCCGGGTTTTCGCATCGTC 61.747 63.158 14.18 0.00 0.00 4.20
622 623 1.971695 CAGTGCTCCCCGGGTTTTC 60.972 63.158 21.85 6.02 0.00 2.29
652 653 2.029666 CAGTCATCGATCCCGGCC 59.970 66.667 0.00 0.00 36.24 6.13
683 684 3.803082 CTCGTGCATGTTGCCCGG 61.803 66.667 5.68 0.00 44.16 5.73
776 778 1.000486 TGGGGAGGAGAAGACCGAG 60.000 63.158 0.00 0.00 34.73 4.63
781 783 1.158466 TGTGCTGGGGAGGAGAAGA 59.842 57.895 0.00 0.00 0.00 2.87
788 790 3.320879 ATCTGCGTGTGCTGGGGAG 62.321 63.158 0.00 0.00 43.34 4.30
803 806 5.417894 ACATGAAAATGCTCACATCACATCT 59.582 36.000 0.00 0.00 34.62 2.90
816 819 1.636988 GCAGGCTCACATGAAAATGC 58.363 50.000 0.00 0.00 0.00 3.56
822 825 1.438651 GTTTACGCAGGCTCACATGA 58.561 50.000 0.00 0.00 0.00 3.07
885 907 4.072131 AGGAAAACACATGTGAAGCGTAT 58.928 39.130 31.94 4.84 0.00 3.06
932 2669 9.002600 GGCTTCATTCTTACATTTTCCATTTTT 57.997 29.630 0.00 0.00 0.00 1.94
957 5370 3.394940 GGGTTTTATAGGAGGGAAGAGGG 59.605 52.174 0.00 0.00 0.00 4.30
988 5487 0.838122 AGCTGGCTTCCTGTAGGTGT 60.838 55.000 0.00 0.00 36.34 4.16
1483 6046 4.192000 GCCTATGCCCATCGATCG 57.808 61.111 9.36 9.36 0.00 3.69
1596 6185 3.727419 GCATGCTTTCGCCATTTCT 57.273 47.368 11.37 0.00 34.43 2.52
1730 6355 1.153549 CAAGCCGTACAGAGCCTCC 60.154 63.158 0.00 0.00 0.00 4.30
1781 6407 8.640091 TCTTCATCTTCATCTTGAACTAATCG 57.360 34.615 0.00 0.00 32.21 3.34
1850 6479 3.624861 ACACGGAGCAATTCTTCATCATC 59.375 43.478 0.00 0.00 0.00 2.92
1856 6485 1.266718 TGCAACACGGAGCAATTCTTC 59.733 47.619 0.00 0.00 37.90 2.87
1905 6539 2.624838 AGCCAACACCAATGAGTTGAAG 59.375 45.455 16.25 5.67 46.01 3.02
1972 6613 6.001460 ACTTCTAAGTCGATGGAGAGATAGG 58.999 44.000 0.00 0.00 32.86 2.57
1976 6617 5.946972 AGAAACTTCTAAGTCGATGGAGAGA 59.053 40.000 0.00 0.00 38.57 3.10
1995 6636 9.624697 TGTCAATCTTGCACATAAATAAGAAAC 57.375 29.630 0.00 0.00 33.39 2.78
2018 6659 3.650139 TCTCGGAGTTTACAAAGCTGTC 58.350 45.455 4.69 0.00 36.96 3.51
2060 6701 2.525592 CTTTGGCCTCCCCCACAA 59.474 61.111 3.32 0.00 33.82 3.33
2061 6702 4.299796 GCTTTGGCCTCCCCCACA 62.300 66.667 3.32 0.00 33.82 4.17
2064 6705 2.120496 AAAGCTTTGGCCTCCCCC 59.880 61.111 11.80 0.00 39.73 5.40
2217 6915 6.606234 TTTTAAGTCGCATGTGAAACTACA 57.394 33.333 11.25 0.00 38.04 2.74
2248 6946 6.490566 ACGTCTTACATTTTGTTATGGTCC 57.509 37.500 0.00 0.00 0.00 4.46
2249 6947 8.791355 AAAACGTCTTACATTTTGTTATGGTC 57.209 30.769 0.00 0.00 0.00 4.02
2298 7149 9.228949 ACTACCTCTATACCATAATGTAAGACG 57.771 37.037 0.00 0.00 0.00 4.18
2463 8226 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
2464 8227 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
2465 8228 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
2466 8229 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
2514 8277 9.028185 CCTTCGTAAACTAATATAAGAGCGTTT 57.972 33.333 0.00 0.00 0.00 3.60
2515 8278 7.650903 CCCTTCGTAAACTAATATAAGAGCGTT 59.349 37.037 0.00 0.00 0.00 4.84
2516 8279 7.013655 TCCCTTCGTAAACTAATATAAGAGCGT 59.986 37.037 0.00 0.00 0.00 5.07
2517 8280 7.365741 TCCCTTCGTAAACTAATATAAGAGCG 58.634 38.462 0.00 0.00 0.00 5.03
2518 8281 8.358895 ACTCCCTTCGTAAACTAATATAAGAGC 58.641 37.037 0.00 0.00 0.00 4.09
2519 8282 9.680315 CACTCCCTTCGTAAACTAATATAAGAG 57.320 37.037 0.00 0.00 0.00 2.85
2520 8283 8.636213 CCACTCCCTTCGTAAACTAATATAAGA 58.364 37.037 0.00 0.00 0.00 2.10
2521 8284 8.636213 TCCACTCCCTTCGTAAACTAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
2522 8285 8.537728 TCCACTCCCTTCGTAAACTAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
2523 8286 8.000709 TCTCCACTCCCTTCGTAAACTAATATA 58.999 37.037 0.00 0.00 0.00 0.86
2524 8287 6.837568 TCTCCACTCCCTTCGTAAACTAATAT 59.162 38.462 0.00 0.00 0.00 1.28
2525 8288 6.096001 GTCTCCACTCCCTTCGTAAACTAATA 59.904 42.308 0.00 0.00 0.00 0.98
2526 8289 5.021458 TCTCCACTCCCTTCGTAAACTAAT 58.979 41.667 0.00 0.00 0.00 1.73
2527 8290 4.219288 GTCTCCACTCCCTTCGTAAACTAA 59.781 45.833 0.00 0.00 0.00 2.24
2528 8291 3.760684 GTCTCCACTCCCTTCGTAAACTA 59.239 47.826 0.00 0.00 0.00 2.24
2529 8292 2.561858 GTCTCCACTCCCTTCGTAAACT 59.438 50.000 0.00 0.00 0.00 2.66
2530 8293 2.561858 AGTCTCCACTCCCTTCGTAAAC 59.438 50.000 0.00 0.00 0.00 2.01
2531 8294 2.885616 AGTCTCCACTCCCTTCGTAAA 58.114 47.619 0.00 0.00 0.00 2.01
2532 8295 2.599408 AGTCTCCACTCCCTTCGTAA 57.401 50.000 0.00 0.00 0.00 3.18
2533 8296 3.726557 TTAGTCTCCACTCCCTTCGTA 57.273 47.619 0.00 0.00 33.62 3.43
2534 8297 2.599408 TTAGTCTCCACTCCCTTCGT 57.401 50.000 0.00 0.00 33.62 3.85
2535 8298 3.006537 TGTTTTAGTCTCCACTCCCTTCG 59.993 47.826 0.00 0.00 33.62 3.79
2536 8299 4.618920 TGTTTTAGTCTCCACTCCCTTC 57.381 45.455 0.00 0.00 33.62 3.46
2537 8300 5.382664 TTTGTTTTAGTCTCCACTCCCTT 57.617 39.130 0.00 0.00 33.62 3.95
2538 8301 5.073144 TGATTTGTTTTAGTCTCCACTCCCT 59.927 40.000 0.00 0.00 33.62 4.20
2539 8302 5.313712 TGATTTGTTTTAGTCTCCACTCCC 58.686 41.667 0.00 0.00 33.62 4.30
2540 8303 6.486993 ACTTGATTTGTTTTAGTCTCCACTCC 59.513 38.462 0.00 0.00 33.62 3.85
2541 8304 7.497925 ACTTGATTTGTTTTAGTCTCCACTC 57.502 36.000 0.00 0.00 33.62 3.51
2542 8305 9.574516 AATACTTGATTTGTTTTAGTCTCCACT 57.425 29.630 0.00 0.00 36.55 4.00
2543 8306 9.827411 GAATACTTGATTTGTTTTAGTCTCCAC 57.173 33.333 0.00 0.00 0.00 4.02
2544 8307 9.010029 GGAATACTTGATTTGTTTTAGTCTCCA 57.990 33.333 0.00 0.00 0.00 3.86
2545 8308 9.232473 AGGAATACTTGATTTGTTTTAGTCTCC 57.768 33.333 0.00 0.00 0.00 3.71
2585 8348 5.237996 CGTAAGTCGGTCTATTCACCTCATA 59.762 44.000 0.00 0.00 33.77 2.15
2586 8349 4.036498 CGTAAGTCGGTCTATTCACCTCAT 59.964 45.833 0.00 0.00 33.77 2.90
2587 8350 3.376234 CGTAAGTCGGTCTATTCACCTCA 59.624 47.826 0.00 0.00 33.77 3.86
2608 8373 1.078426 AACTTCAGATTCCCCGCCG 60.078 57.895 0.00 0.00 0.00 6.46
2618 8383 3.735237 ACTTTGCGAGAGAACTTCAGA 57.265 42.857 0.00 0.00 0.00 3.27
2619 8384 3.675698 GGTACTTTGCGAGAGAACTTCAG 59.324 47.826 0.00 0.00 0.00 3.02
2673 8438 5.637006 TGTAATTGTTGGAAGCCATGTAC 57.363 39.130 0.00 0.00 31.53 2.90
2675 8440 5.018809 AGATGTAATTGTTGGAAGCCATGT 58.981 37.500 0.00 0.00 31.53 3.21
2765 8560 2.811431 CGACTAGTGCCATTTTTGGTCA 59.189 45.455 0.00 0.00 0.00 4.02
2775 8570 3.552890 GCATGATATGTCGACTAGTGCCA 60.553 47.826 17.92 7.64 0.00 4.92
2787 8590 8.645814 AATTAAGATGATGTGGCATGATATGT 57.354 30.769 0.00 0.00 0.00 2.29
2791 8594 8.479689 TCAAAAATTAAGATGATGTGGCATGAT 58.520 29.630 0.00 0.00 0.00 2.45
2794 8597 7.279313 GCTTCAAAAATTAAGATGATGTGGCAT 59.721 33.333 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.