Multiple sequence alignment - TraesCS2D01G493400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G493400 chr2D 100.000 3560 0 0 1 3560 590932647 590929088 0.000000e+00 6575.0
1 TraesCS2D01G493400 chr2D 92.202 731 49 8 2835 3560 614811175 614810448 0.000000e+00 1027.0
2 TraesCS2D01G493400 chr2D 91.770 729 55 5 2837 3560 12544114 12543386 0.000000e+00 1009.0
3 TraesCS2D01G493400 chr2B 94.977 1314 51 8 1544 2845 716552504 716553814 0.000000e+00 2047.0
4 TraesCS2D01G493400 chr2B 95.046 767 15 9 729 1477 716551165 716551926 0.000000e+00 1184.0
5 TraesCS2D01G493400 chr2B 87.176 811 70 28 1598 2386 792683422 792682624 0.000000e+00 891.0
6 TraesCS2D01G493400 chr2B 87.250 400 50 1 1097 1496 792683887 792683489 4.190000e-124 455.0
7 TraesCS2D01G493400 chr2A 95.533 1209 43 6 1544 2745 725912828 725914032 0.000000e+00 1923.0
8 TraesCS2D01G493400 chr2A 94.416 788 24 7 705 1477 725911501 725912283 0.000000e+00 1194.0
9 TraesCS2D01G493400 chr2A 90.991 111 6 2 575 681 725911160 725911270 2.860000e-31 147.0
10 TraesCS2D01G493400 chr1A 93.036 718 47 3 2845 3559 2863287 2862570 0.000000e+00 1046.0
11 TraesCS2D01G493400 chr3A 92.659 722 46 7 2844 3560 47284897 47285616 0.000000e+00 1033.0
12 TraesCS2D01G493400 chr3A 78.756 193 30 7 1838 2023 599899198 599899386 6.240000e-23 119.0
13 TraesCS2D01G493400 chr1B 91.136 722 57 5 2846 3560 577793171 577792450 0.000000e+00 972.0
14 TraesCS2D01G493400 chr6D 90.960 719 51 10 2846 3560 25857863 25858571 0.000000e+00 955.0
15 TraesCS2D01G493400 chr6D 92.188 256 20 0 318 573 196103110 196102855 2.610000e-96 363.0
16 TraesCS2D01G493400 chr6D 90.421 261 24 1 318 577 390866383 390866123 3.400000e-90 342.0
17 TraesCS2D01G493400 chr7B 90.582 722 62 6 2843 3559 685254378 685253658 0.000000e+00 952.0
18 TraesCS2D01G493400 chr7B 89.583 720 69 6 2846 3560 27463287 27464005 0.000000e+00 909.0
19 TraesCS2D01G493400 chr4D 90.305 722 65 5 2843 3560 495799119 495798399 0.000000e+00 941.0
20 TraesCS2D01G493400 chr7A 90.365 301 17 6 284 573 342533037 342532738 5.580000e-103 385.0
21 TraesCS2D01G493400 chr7A 90.698 43 4 0 166 208 567530627 567530669 1.380000e-04 58.4
22 TraesCS2D01G493400 chr3D 90.169 295 18 3 290 573 400122597 400122891 1.210000e-99 374.0
23 TraesCS2D01G493400 chr3D 90.196 255 25 0 318 572 349920791 349920537 2.050000e-87 333.0
24 TraesCS2D01G493400 chr3D 90.119 253 25 0 318 570 69276835 69276583 2.650000e-86 329.0
25 TraesCS2D01G493400 chr3D 78.756 193 30 7 1838 2023 457032531 457032719 6.240000e-23 119.0
26 TraesCS2D01G493400 chr5D 89.354 263 26 2 318 580 261307715 261307455 2.650000e-86 329.0
27 TraesCS2D01G493400 chr1D 89.960 249 25 0 318 566 33857910 33857662 4.430000e-84 322.0
28 TraesCS2D01G493400 chr5A 89.062 256 28 0 318 573 260263719 260263464 5.740000e-83 318.0
29 TraesCS2D01G493400 chr3B 78.756 193 30 7 1838 2023 603832342 603832530 6.240000e-23 119.0
30 TraesCS2D01G493400 chr7D 74.721 269 57 3 291 548 320264051 320263783 3.760000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G493400 chr2D 590929088 590932647 3559 True 6575.0 6575 100.000000 1 3560 1 chr2D.!!$R2 3559
1 TraesCS2D01G493400 chr2D 614810448 614811175 727 True 1027.0 1027 92.202000 2835 3560 1 chr2D.!!$R3 725
2 TraesCS2D01G493400 chr2D 12543386 12544114 728 True 1009.0 1009 91.770000 2837 3560 1 chr2D.!!$R1 723
3 TraesCS2D01G493400 chr2B 716551165 716553814 2649 False 1615.5 2047 95.011500 729 2845 2 chr2B.!!$F1 2116
4 TraesCS2D01G493400 chr2B 792682624 792683887 1263 True 673.0 891 87.213000 1097 2386 2 chr2B.!!$R1 1289
5 TraesCS2D01G493400 chr2A 725911160 725914032 2872 False 1088.0 1923 93.646667 575 2745 3 chr2A.!!$F1 2170
6 TraesCS2D01G493400 chr1A 2862570 2863287 717 True 1046.0 1046 93.036000 2845 3559 1 chr1A.!!$R1 714
7 TraesCS2D01G493400 chr3A 47284897 47285616 719 False 1033.0 1033 92.659000 2844 3560 1 chr3A.!!$F1 716
8 TraesCS2D01G493400 chr1B 577792450 577793171 721 True 972.0 972 91.136000 2846 3560 1 chr1B.!!$R1 714
9 TraesCS2D01G493400 chr6D 25857863 25858571 708 False 955.0 955 90.960000 2846 3560 1 chr6D.!!$F1 714
10 TraesCS2D01G493400 chr7B 685253658 685254378 720 True 952.0 952 90.582000 2843 3559 1 chr7B.!!$R1 716
11 TraesCS2D01G493400 chr7B 27463287 27464005 718 False 909.0 909 89.583000 2846 3560 1 chr7B.!!$F1 714
12 TraesCS2D01G493400 chr4D 495798399 495799119 720 True 941.0 941 90.305000 2843 3560 1 chr4D.!!$R1 717

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
216 217 0.106669 GGACCAGGCCTATTGAACCC 60.107 60.0 3.98 0.0 0.00 4.11 F
458 459 0.242286 CACGTGCTGTAGCTGACTCT 59.758 55.0 0.82 0.0 42.66 3.24 F
517 518 0.250295 CCCTCCACGTCAGCAGAAAA 60.250 55.0 0.00 0.0 0.00 2.29 F
698 920 0.317479 ACCTCACACGTCTACAAGCC 59.683 55.0 0.00 0.0 0.00 4.35 F
820 1051 0.390340 CGATACGGCTGGATGGATGG 60.390 60.0 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1831 2640 0.034337 GCGGGTAGAAGTTGACCACA 59.966 55.000 6.01 0.00 37.47 4.17 R
2299 3133 3.896133 GCGGCGGTACATCTCGGA 61.896 66.667 9.78 0.00 0.00 4.55 R
2509 3346 2.689983 GGAGAATCAAATCCCACGCATT 59.310 45.455 0.00 0.00 36.25 3.56 R
2556 3398 1.401552 TGCTACACACGTACGGATACC 59.598 52.381 21.06 2.19 0.00 2.73 R
2720 3568 1.462283 CTCATGTGCACACGAAAGGAG 59.538 52.381 24.37 16.89 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.035923 TCTCGATCACTCCCTCATGC 58.964 55.000 0.00 0.00 0.00 4.06
23 24 0.318529 CTCGATCACTCCCTCATGCG 60.319 60.000 0.00 0.00 0.00 4.73
24 25 0.751643 TCGATCACTCCCTCATGCGA 60.752 55.000 0.00 0.00 0.00 5.10
25 26 0.596083 CGATCACTCCCTCATGCGAC 60.596 60.000 0.00 0.00 0.00 5.19
26 27 0.249657 GATCACTCCCTCATGCGACC 60.250 60.000 0.00 0.00 0.00 4.79
27 28 0.977627 ATCACTCCCTCATGCGACCA 60.978 55.000 0.00 0.00 0.00 4.02
28 29 1.448540 CACTCCCTCATGCGACCAC 60.449 63.158 0.00 0.00 0.00 4.16
29 30 2.202797 CTCCCTCATGCGACCACG 60.203 66.667 0.00 0.00 42.93 4.94
30 31 2.678580 TCCCTCATGCGACCACGA 60.679 61.111 0.00 0.00 42.66 4.35
31 32 2.021068 CTCCCTCATGCGACCACGAT 62.021 60.000 0.00 0.00 42.66 3.73
32 33 1.884464 CCCTCATGCGACCACGATG 60.884 63.158 0.00 0.00 42.66 3.84
33 34 1.141665 CCTCATGCGACCACGATGA 59.858 57.895 0.00 0.00 42.66 2.92
34 35 0.460109 CCTCATGCGACCACGATGAA 60.460 55.000 0.00 0.00 42.66 2.57
35 36 1.575244 CTCATGCGACCACGATGAAT 58.425 50.000 0.00 0.00 42.66 2.57
36 37 1.259770 CTCATGCGACCACGATGAATG 59.740 52.381 0.00 0.00 42.66 2.67
37 38 1.134848 TCATGCGACCACGATGAATGA 60.135 47.619 0.00 0.00 42.66 2.57
38 39 1.869132 CATGCGACCACGATGAATGAT 59.131 47.619 0.00 0.00 42.66 2.45
39 40 1.289276 TGCGACCACGATGAATGATG 58.711 50.000 0.00 0.00 42.66 3.07
40 41 1.134848 TGCGACCACGATGAATGATGA 60.135 47.619 0.00 0.00 42.66 2.92
41 42 2.138320 GCGACCACGATGAATGATGAT 58.862 47.619 0.00 0.00 42.66 2.45
42 43 2.545526 GCGACCACGATGAATGATGATT 59.454 45.455 0.00 0.00 42.66 2.57
43 44 3.002656 GCGACCACGATGAATGATGATTT 59.997 43.478 0.00 0.00 42.66 2.17
44 45 4.521010 CGACCACGATGAATGATGATTTG 58.479 43.478 0.00 0.00 42.66 2.32
45 46 4.285292 GACCACGATGAATGATGATTTGC 58.715 43.478 0.00 0.00 0.00 3.68
46 47 3.067180 ACCACGATGAATGATGATTTGCC 59.933 43.478 0.00 0.00 0.00 4.52
47 48 3.067040 CCACGATGAATGATGATTTGCCA 59.933 43.478 0.00 0.00 0.00 4.92
48 49 4.440387 CCACGATGAATGATGATTTGCCAA 60.440 41.667 0.00 0.00 0.00 4.52
49 50 5.286438 CACGATGAATGATGATTTGCCAAT 58.714 37.500 0.00 0.00 0.00 3.16
50 51 6.440436 CACGATGAATGATGATTTGCCAATA 58.560 36.000 0.00 0.00 0.00 1.90
51 52 6.581166 CACGATGAATGATGATTTGCCAATAG 59.419 38.462 0.00 0.00 0.00 1.73
52 53 6.090783 CGATGAATGATGATTTGCCAATAGG 58.909 40.000 0.00 0.00 38.23 2.57
53 54 6.072342 CGATGAATGATGATTTGCCAATAGGA 60.072 38.462 0.00 0.00 36.89 2.94
54 55 6.644248 TGAATGATGATTTGCCAATAGGAG 57.356 37.500 0.00 0.00 36.89 3.69
55 56 6.367161 TGAATGATGATTTGCCAATAGGAGA 58.633 36.000 0.00 0.00 36.89 3.71
56 57 6.263842 TGAATGATGATTTGCCAATAGGAGAC 59.736 38.462 0.00 0.00 36.89 3.36
57 58 4.464008 TGATGATTTGCCAATAGGAGACC 58.536 43.478 0.00 0.00 36.89 3.85
58 59 2.917933 TGATTTGCCAATAGGAGACCG 58.082 47.619 0.00 0.00 36.89 4.79
59 60 1.604278 GATTTGCCAATAGGAGACCGC 59.396 52.381 0.00 0.00 36.89 5.68
60 61 0.326595 TTTGCCAATAGGAGACCGCA 59.673 50.000 0.00 0.00 36.89 5.69
61 62 0.546122 TTGCCAATAGGAGACCGCAT 59.454 50.000 0.00 0.00 36.89 4.73
62 63 0.106708 TGCCAATAGGAGACCGCATC 59.893 55.000 0.00 0.00 36.89 3.91
63 64 0.946221 GCCAATAGGAGACCGCATCG 60.946 60.000 0.00 0.00 36.89 3.84
64 65 0.389391 CCAATAGGAGACCGCATCGT 59.611 55.000 0.00 0.00 36.89 3.73
65 66 1.491670 CAATAGGAGACCGCATCGTG 58.508 55.000 0.00 0.00 0.00 4.35
66 67 0.249489 AATAGGAGACCGCATCGTGC 60.249 55.000 0.58 0.58 40.69 5.34
67 68 2.088674 ATAGGAGACCGCATCGTGCC 62.089 60.000 4.73 0.00 41.12 5.01
69 70 4.451150 GAGACCGCATCGTGCCCA 62.451 66.667 4.73 0.00 41.12 5.36
70 71 3.950794 GAGACCGCATCGTGCCCAA 62.951 63.158 4.73 0.00 41.12 4.12
71 72 3.053291 GACCGCATCGTGCCCAAA 61.053 61.111 4.73 0.00 41.12 3.28
72 73 3.039202 GACCGCATCGTGCCCAAAG 62.039 63.158 4.73 0.00 41.12 2.77
73 74 2.745884 CCGCATCGTGCCCAAAGA 60.746 61.111 4.73 0.00 41.12 2.52
74 75 2.480555 CGCATCGTGCCCAAAGAC 59.519 61.111 4.73 0.00 41.12 3.01
75 76 2.877691 GCATCGTGCCCAAAGACC 59.122 61.111 0.00 0.00 37.42 3.85
76 77 1.971167 GCATCGTGCCCAAAGACCA 60.971 57.895 0.00 0.00 37.42 4.02
77 78 1.875963 CATCGTGCCCAAAGACCAC 59.124 57.895 0.00 0.00 0.00 4.16
78 79 1.303317 ATCGTGCCCAAAGACCACC 60.303 57.895 0.00 0.00 0.00 4.61
79 80 1.779061 ATCGTGCCCAAAGACCACCT 61.779 55.000 0.00 0.00 0.00 4.00
80 81 1.528309 CGTGCCCAAAGACCACCTT 60.528 57.895 0.00 0.00 36.47 3.50
81 82 1.795170 CGTGCCCAAAGACCACCTTG 61.795 60.000 0.00 0.00 34.79 3.61
82 83 0.467290 GTGCCCAAAGACCACCTTGA 60.467 55.000 0.00 0.00 34.79 3.02
83 84 0.178992 TGCCCAAAGACCACCTTGAG 60.179 55.000 0.00 0.00 34.79 3.02
84 85 0.895559 GCCCAAAGACCACCTTGAGG 60.896 60.000 0.00 0.00 42.17 3.86
85 86 0.771127 CCCAAAGACCACCTTGAGGA 59.229 55.000 3.59 0.00 38.94 3.71
86 87 1.545651 CCCAAAGACCACCTTGAGGAC 60.546 57.143 3.59 0.00 38.94 3.85
87 88 1.512926 CAAAGACCACCTTGAGGACG 58.487 55.000 3.59 0.00 38.94 4.79
88 89 0.250338 AAAGACCACCTTGAGGACGC 60.250 55.000 3.59 0.00 38.94 5.19
89 90 1.407656 AAGACCACCTTGAGGACGCA 61.408 55.000 3.59 0.00 38.94 5.24
90 91 1.070786 GACCACCTTGAGGACGCAA 59.929 57.895 3.59 0.00 38.94 4.85
91 92 0.321653 GACCACCTTGAGGACGCAAT 60.322 55.000 3.59 0.00 38.94 3.56
92 93 0.110486 ACCACCTTGAGGACGCAATT 59.890 50.000 3.59 0.00 38.94 2.32
93 94 1.247567 CCACCTTGAGGACGCAATTT 58.752 50.000 3.59 0.00 38.94 1.82
94 95 1.200020 CCACCTTGAGGACGCAATTTC 59.800 52.381 3.59 0.00 38.94 2.17
95 96 1.135972 CACCTTGAGGACGCAATTTCG 60.136 52.381 3.59 0.00 38.94 3.46
96 97 0.447801 CCTTGAGGACGCAATTTCGG 59.552 55.000 1.93 0.00 37.39 4.30
97 98 1.438651 CTTGAGGACGCAATTTCGGA 58.561 50.000 1.93 0.00 0.00 4.55
98 99 1.394917 CTTGAGGACGCAATTTCGGAG 59.605 52.381 1.93 0.00 0.00 4.63
99 100 0.606096 TGAGGACGCAATTTCGGAGA 59.394 50.000 1.93 0.00 0.00 3.71
100 101 1.207089 TGAGGACGCAATTTCGGAGAT 59.793 47.619 1.93 0.00 35.04 2.75
101 102 1.594862 GAGGACGCAATTTCGGAGATG 59.405 52.381 1.93 0.00 35.04 2.90
102 103 0.657840 GGACGCAATTTCGGAGATGG 59.342 55.000 1.93 0.00 35.04 3.51
103 104 1.369625 GACGCAATTTCGGAGATGGT 58.630 50.000 1.93 0.00 35.04 3.55
104 105 2.546778 GACGCAATTTCGGAGATGGTA 58.453 47.619 1.93 0.00 35.04 3.25
105 106 3.131396 GACGCAATTTCGGAGATGGTAT 58.869 45.455 1.93 0.00 35.04 2.73
106 107 4.304110 GACGCAATTTCGGAGATGGTATA 58.696 43.478 1.93 0.00 35.04 1.47
107 108 4.699637 ACGCAATTTCGGAGATGGTATAA 58.300 39.130 1.93 0.00 35.04 0.98
108 109 4.510340 ACGCAATTTCGGAGATGGTATAAC 59.490 41.667 1.93 0.00 35.04 1.89
109 110 4.750098 CGCAATTTCGGAGATGGTATAACT 59.250 41.667 0.00 0.00 35.04 2.24
110 111 5.107453 CGCAATTTCGGAGATGGTATAACTC 60.107 44.000 0.00 0.00 35.04 3.01
111 112 5.992217 GCAATTTCGGAGATGGTATAACTCT 59.008 40.000 0.00 0.00 35.04 3.24
112 113 7.152645 GCAATTTCGGAGATGGTATAACTCTA 58.847 38.462 0.00 0.00 35.04 2.43
113 114 7.656137 GCAATTTCGGAGATGGTATAACTCTAA 59.344 37.037 0.00 0.00 35.04 2.10
114 115 9.712305 CAATTTCGGAGATGGTATAACTCTAAT 57.288 33.333 0.00 0.00 35.04 1.73
117 118 9.760077 TTTCGGAGATGGTATAACTCTAATTTC 57.240 33.333 0.00 0.00 35.04 2.17
118 119 8.473358 TCGGAGATGGTATAACTCTAATTTCA 57.527 34.615 0.00 0.00 0.00 2.69
119 120 9.090103 TCGGAGATGGTATAACTCTAATTTCAT 57.910 33.333 0.00 0.00 0.00 2.57
120 121 9.712305 CGGAGATGGTATAACTCTAATTTCATT 57.288 33.333 0.00 0.00 0.00 2.57
166 167 6.394345 TTTTTAAAATATGGGGCCCACATT 57.606 33.333 31.54 27.15 35.80 2.71
167 168 5.622346 TTTAAAATATGGGGCCCACATTC 57.378 39.130 28.49 5.98 35.80 2.67
168 169 3.419732 AAAATATGGGGCCCACATTCT 57.580 42.857 28.49 13.65 35.80 2.40
169 170 4.551215 AAAATATGGGGCCCACATTCTA 57.449 40.909 28.49 17.00 35.80 2.10
170 171 4.551215 AAATATGGGGCCCACATTCTAA 57.449 40.909 28.49 9.79 35.80 2.10
171 172 4.765195 AATATGGGGCCCACATTCTAAT 57.235 40.909 31.54 12.42 35.80 1.73
172 173 4.765195 ATATGGGGCCCACATTCTAATT 57.235 40.909 31.54 11.56 35.80 1.40
173 174 2.938428 TGGGGCCCACATTCTAATTT 57.062 45.000 24.76 0.00 0.00 1.82
174 175 2.745968 TGGGGCCCACATTCTAATTTC 58.254 47.619 24.76 0.74 0.00 2.17
175 176 1.681264 GGGGCCCACATTCTAATTTCG 59.319 52.381 26.86 0.00 0.00 3.46
176 177 1.067060 GGGCCCACATTCTAATTTCGC 59.933 52.381 19.95 0.00 0.00 4.70
177 178 1.067060 GGCCCACATTCTAATTTCGCC 59.933 52.381 0.00 0.00 0.00 5.54
178 179 2.024414 GCCCACATTCTAATTTCGCCT 58.976 47.619 0.00 0.00 0.00 5.52
179 180 2.033424 GCCCACATTCTAATTTCGCCTC 59.967 50.000 0.00 0.00 0.00 4.70
180 181 2.287915 CCCACATTCTAATTTCGCCTCG 59.712 50.000 0.00 0.00 0.00 4.63
181 182 2.287915 CCACATTCTAATTTCGCCTCGG 59.712 50.000 0.00 0.00 0.00 4.63
182 183 2.287915 CACATTCTAATTTCGCCTCGGG 59.712 50.000 0.00 0.00 0.00 5.14
183 184 1.264288 CATTCTAATTTCGCCTCGGGC 59.736 52.381 4.96 4.96 46.75 6.13
199 200 3.670105 GGCACCCAAAATCTCAGGA 57.330 52.632 0.00 0.00 0.00 3.86
200 201 1.177401 GGCACCCAAAATCTCAGGAC 58.823 55.000 0.00 0.00 0.00 3.85
201 202 1.177401 GCACCCAAAATCTCAGGACC 58.823 55.000 0.00 0.00 0.00 4.46
202 203 1.547675 GCACCCAAAATCTCAGGACCA 60.548 52.381 0.00 0.00 0.00 4.02
203 204 2.440409 CACCCAAAATCTCAGGACCAG 58.560 52.381 0.00 0.00 0.00 4.00
204 205 1.355720 ACCCAAAATCTCAGGACCAGG 59.644 52.381 0.00 0.00 0.00 4.45
205 206 1.467920 CCAAAATCTCAGGACCAGGC 58.532 55.000 0.00 0.00 0.00 4.85
206 207 1.467920 CAAAATCTCAGGACCAGGCC 58.532 55.000 0.00 0.00 0.00 5.19
207 208 1.005215 CAAAATCTCAGGACCAGGCCT 59.995 52.381 0.00 0.00 39.37 5.19
208 209 2.239654 CAAAATCTCAGGACCAGGCCTA 59.760 50.000 3.98 0.00 36.22 3.93
209 210 2.503869 AATCTCAGGACCAGGCCTAT 57.496 50.000 3.98 0.00 36.22 2.57
210 211 2.503869 ATCTCAGGACCAGGCCTATT 57.496 50.000 3.98 0.00 36.22 1.73
211 212 1.500474 TCTCAGGACCAGGCCTATTG 58.500 55.000 3.98 0.00 36.22 1.90
212 213 1.008327 TCTCAGGACCAGGCCTATTGA 59.992 52.381 3.98 4.30 36.22 2.57
213 214 1.839994 CTCAGGACCAGGCCTATTGAA 59.160 52.381 3.98 0.00 36.22 2.69
214 215 1.559682 TCAGGACCAGGCCTATTGAAC 59.440 52.381 3.98 0.00 36.22 3.18
215 216 0.919710 AGGACCAGGCCTATTGAACC 59.080 55.000 3.98 3.62 36.22 3.62
216 217 0.106669 GGACCAGGCCTATTGAACCC 60.107 60.000 3.98 0.00 0.00 4.11
217 218 0.623723 GACCAGGCCTATTGAACCCA 59.376 55.000 3.98 0.00 0.00 4.51
218 219 0.331616 ACCAGGCCTATTGAACCCAC 59.668 55.000 3.98 0.00 0.00 4.61
219 220 0.331278 CCAGGCCTATTGAACCCACA 59.669 55.000 3.98 0.00 0.00 4.17
220 221 1.272425 CCAGGCCTATTGAACCCACAA 60.272 52.381 3.98 0.00 0.00 3.33
221 222 1.818674 CAGGCCTATTGAACCCACAAC 59.181 52.381 3.98 0.00 32.50 3.32
222 223 1.710809 AGGCCTATTGAACCCACAACT 59.289 47.619 1.29 0.00 32.50 3.16
223 224 2.110011 AGGCCTATTGAACCCACAACTT 59.890 45.455 1.29 0.00 32.50 2.66
224 225 2.897326 GGCCTATTGAACCCACAACTTT 59.103 45.455 0.00 0.00 32.50 2.66
225 226 3.323691 GGCCTATTGAACCCACAACTTTT 59.676 43.478 0.00 0.00 32.50 2.27
226 227 4.202315 GGCCTATTGAACCCACAACTTTTT 60.202 41.667 0.00 0.00 32.50 1.94
227 228 5.011227 GGCCTATTGAACCCACAACTTTTTA 59.989 40.000 0.00 0.00 32.50 1.52
228 229 6.295632 GGCCTATTGAACCCACAACTTTTTAT 60.296 38.462 0.00 0.00 32.50 1.40
229 230 6.589907 GCCTATTGAACCCACAACTTTTTATG 59.410 38.462 0.00 0.00 32.50 1.90
230 231 6.589907 CCTATTGAACCCACAACTTTTTATGC 59.410 38.462 0.00 0.00 32.50 3.14
231 232 5.606348 TTGAACCCACAACTTTTTATGCT 57.394 34.783 0.00 0.00 0.00 3.79
232 233 4.942852 TGAACCCACAACTTTTTATGCTG 58.057 39.130 0.00 0.00 0.00 4.41
233 234 4.202202 TGAACCCACAACTTTTTATGCTGG 60.202 41.667 0.00 0.00 0.00 4.85
234 235 2.037121 ACCCACAACTTTTTATGCTGGC 59.963 45.455 0.00 0.00 0.00 4.85
235 236 2.036992 CCCACAACTTTTTATGCTGGCA 59.963 45.455 0.00 0.00 0.00 4.92
236 237 3.059166 CCACAACTTTTTATGCTGGCAC 58.941 45.455 0.00 0.00 0.00 5.01
237 238 3.059166 CACAACTTTTTATGCTGGCACC 58.941 45.455 0.00 0.00 0.00 5.01
238 239 2.288152 ACAACTTTTTATGCTGGCACCG 60.288 45.455 0.00 0.00 0.00 4.94
239 240 0.243636 ACTTTTTATGCTGGCACCGC 59.756 50.000 0.00 0.00 0.00 5.68
256 257 4.418401 CCATTGCGTTGCCCCGTG 62.418 66.667 0.00 0.00 0.00 4.94
257 258 3.669344 CATTGCGTTGCCCCGTGT 61.669 61.111 0.00 0.00 0.00 4.49
258 259 2.032834 ATTGCGTTGCCCCGTGTA 59.967 55.556 0.00 0.00 0.00 2.90
259 260 2.038269 ATTGCGTTGCCCCGTGTAG 61.038 57.895 0.00 0.00 0.00 2.74
260 261 2.741486 ATTGCGTTGCCCCGTGTAGT 62.741 55.000 0.00 0.00 0.00 2.73
261 262 3.419759 GCGTTGCCCCGTGTAGTG 61.420 66.667 0.00 0.00 0.00 2.74
262 263 2.340809 CGTTGCCCCGTGTAGTGA 59.659 61.111 0.00 0.00 0.00 3.41
263 264 1.079405 CGTTGCCCCGTGTAGTGAT 60.079 57.895 0.00 0.00 0.00 3.06
264 265 1.358725 CGTTGCCCCGTGTAGTGATG 61.359 60.000 0.00 0.00 0.00 3.07
265 266 0.321298 GTTGCCCCGTGTAGTGATGT 60.321 55.000 0.00 0.00 0.00 3.06
266 267 0.321210 TTGCCCCGTGTAGTGATGTG 60.321 55.000 0.00 0.00 0.00 3.21
267 268 1.449601 GCCCCGTGTAGTGATGTGG 60.450 63.158 0.00 0.00 0.00 4.17
268 269 1.449601 CCCCGTGTAGTGATGTGGC 60.450 63.158 0.00 0.00 0.00 5.01
269 270 1.295101 CCCGTGTAGTGATGTGGCA 59.705 57.895 0.00 0.00 0.00 4.92
270 271 0.321210 CCCGTGTAGTGATGTGGCAA 60.321 55.000 0.00 0.00 0.00 4.52
271 272 1.078709 CCGTGTAGTGATGTGGCAAG 58.921 55.000 0.00 0.00 0.00 4.01
272 273 1.337728 CCGTGTAGTGATGTGGCAAGA 60.338 52.381 0.00 0.00 0.00 3.02
273 274 2.412870 CGTGTAGTGATGTGGCAAGAA 58.587 47.619 0.00 0.00 0.00 2.52
274 275 2.157668 CGTGTAGTGATGTGGCAAGAAC 59.842 50.000 0.00 0.00 0.00 3.01
275 276 3.138304 GTGTAGTGATGTGGCAAGAACA 58.862 45.455 0.00 0.00 0.00 3.18
276 277 3.753272 GTGTAGTGATGTGGCAAGAACAT 59.247 43.478 0.00 0.00 40.93 2.71
277 278 3.752747 TGTAGTGATGTGGCAAGAACATG 59.247 43.478 0.00 0.00 38.37 3.21
278 279 1.542915 AGTGATGTGGCAAGAACATGC 59.457 47.619 0.00 0.00 45.67 4.06
284 285 2.877691 GCAAGAACATGCCCGTCC 59.122 61.111 0.00 0.00 40.49 4.79
285 286 1.971167 GCAAGAACATGCCCGTCCA 60.971 57.895 0.00 0.00 40.49 4.02
286 287 1.315257 GCAAGAACATGCCCGTCCAT 61.315 55.000 0.00 0.00 40.49 3.41
287 288 0.734889 CAAGAACATGCCCGTCCATC 59.265 55.000 0.00 0.00 0.00 3.51
288 289 0.744414 AAGAACATGCCCGTCCATCG 60.744 55.000 0.00 0.00 39.52 3.84
289 290 2.823829 GAACATGCCCGTCCATCGC 61.824 63.158 0.00 0.00 38.35 4.58
290 291 3.329542 AACATGCCCGTCCATCGCT 62.330 57.895 0.00 0.00 38.35 4.93
291 292 2.969238 CATGCCCGTCCATCGCTC 60.969 66.667 0.00 0.00 38.35 5.03
292 293 3.157252 ATGCCCGTCCATCGCTCT 61.157 61.111 0.00 0.00 38.35 4.09
293 294 2.735772 ATGCCCGTCCATCGCTCTT 61.736 57.895 0.00 0.00 38.35 2.85
294 295 1.399744 ATGCCCGTCCATCGCTCTTA 61.400 55.000 0.00 0.00 38.35 2.10
295 296 1.300233 GCCCGTCCATCGCTCTTAG 60.300 63.158 0.00 0.00 38.35 2.18
296 297 1.735376 GCCCGTCCATCGCTCTTAGA 61.735 60.000 0.00 0.00 38.35 2.10
297 298 0.312416 CCCGTCCATCGCTCTTAGAG 59.688 60.000 4.63 4.63 38.35 2.43
315 316 9.250624 CTCTTAGAGCATGGTTAATAGTACAAC 57.749 37.037 0.00 0.00 0.00 3.32
316 317 8.202137 TCTTAGAGCATGGTTAATAGTACAACC 58.798 37.037 0.00 6.00 43.78 3.77
328 329 9.878599 GTTAATAGTACAACCATATGTCATTGC 57.121 33.333 1.24 0.00 34.75 3.56
329 330 7.510549 AATAGTACAACCATATGTCATTGCC 57.489 36.000 1.24 0.00 34.75 4.52
330 331 4.854173 AGTACAACCATATGTCATTGCCA 58.146 39.130 1.24 0.00 34.75 4.92
331 332 5.448654 AGTACAACCATATGTCATTGCCAT 58.551 37.500 1.24 0.00 34.75 4.40
332 333 4.659111 ACAACCATATGTCATTGCCATG 57.341 40.909 1.24 0.00 0.00 3.66
333 334 4.025360 ACAACCATATGTCATTGCCATGT 58.975 39.130 1.24 0.00 0.00 3.21
334 335 4.098349 ACAACCATATGTCATTGCCATGTC 59.902 41.667 1.24 0.00 0.00 3.06
335 336 3.900971 ACCATATGTCATTGCCATGTCA 58.099 40.909 1.24 0.47 33.67 3.58
336 337 4.476297 ACCATATGTCATTGCCATGTCAT 58.524 39.130 13.46 13.46 40.77 3.06
337 338 4.521639 ACCATATGTCATTGCCATGTCATC 59.478 41.667 12.55 0.00 39.19 2.92
338 339 4.765339 CCATATGTCATTGCCATGTCATCT 59.235 41.667 12.55 2.74 39.19 2.90
339 340 5.941647 CCATATGTCATTGCCATGTCATCTA 59.058 40.000 12.55 0.00 39.19 1.98
340 341 6.602009 CCATATGTCATTGCCATGTCATCTAT 59.398 38.462 12.55 1.84 39.19 1.98
341 342 7.771826 CCATATGTCATTGCCATGTCATCTATA 59.228 37.037 12.55 0.00 39.19 1.31
342 343 8.827677 CATATGTCATTGCCATGTCATCTATAG 58.172 37.037 12.55 0.00 39.19 1.31
343 344 4.999311 TGTCATTGCCATGTCATCTATAGC 59.001 41.667 0.00 0.00 0.00 2.97
344 345 4.394300 GTCATTGCCATGTCATCTATAGCC 59.606 45.833 0.00 0.00 0.00 3.93
345 346 4.041938 TCATTGCCATGTCATCTATAGCCA 59.958 41.667 0.00 0.00 0.00 4.75
346 347 4.436113 TTGCCATGTCATCTATAGCCAA 57.564 40.909 0.00 0.00 0.00 4.52
347 348 4.645863 TGCCATGTCATCTATAGCCAAT 57.354 40.909 0.00 0.00 0.00 3.16
348 349 4.582869 TGCCATGTCATCTATAGCCAATC 58.417 43.478 0.00 0.00 0.00 2.67
349 350 4.287845 TGCCATGTCATCTATAGCCAATCT 59.712 41.667 0.00 0.00 0.00 2.40
350 351 5.221986 TGCCATGTCATCTATAGCCAATCTT 60.222 40.000 0.00 0.00 0.00 2.40
351 352 5.123502 GCCATGTCATCTATAGCCAATCTTG 59.876 44.000 0.00 0.00 0.00 3.02
352 353 6.236409 CCATGTCATCTATAGCCAATCTTGT 58.764 40.000 0.00 0.00 0.00 3.16
353 354 7.389232 CCATGTCATCTATAGCCAATCTTGTA 58.611 38.462 0.00 0.00 0.00 2.41
354 355 7.548427 CCATGTCATCTATAGCCAATCTTGTAG 59.452 40.741 0.00 0.00 0.00 2.74
355 356 6.459066 TGTCATCTATAGCCAATCTTGTAGC 58.541 40.000 0.00 0.00 0.00 3.58
356 357 5.872070 GTCATCTATAGCCAATCTTGTAGCC 59.128 44.000 0.00 0.00 0.00 3.93
357 358 5.782331 TCATCTATAGCCAATCTTGTAGCCT 59.218 40.000 0.00 0.00 0.00 4.58
358 359 6.270927 TCATCTATAGCCAATCTTGTAGCCTT 59.729 38.462 0.00 0.00 0.00 4.35
359 360 6.102897 TCTATAGCCAATCTTGTAGCCTTC 57.897 41.667 0.00 0.00 0.00 3.46
360 361 4.778213 ATAGCCAATCTTGTAGCCTTCA 57.222 40.909 0.00 0.00 0.00 3.02
361 362 3.439857 AGCCAATCTTGTAGCCTTCAA 57.560 42.857 0.00 0.00 0.00 2.69
362 363 3.350833 AGCCAATCTTGTAGCCTTCAAG 58.649 45.455 4.83 4.83 42.25 3.02
363 364 3.084786 GCCAATCTTGTAGCCTTCAAGT 58.915 45.455 10.38 0.00 41.78 3.16
364 365 4.019321 AGCCAATCTTGTAGCCTTCAAGTA 60.019 41.667 10.38 0.00 41.78 2.24
365 366 4.095036 GCCAATCTTGTAGCCTTCAAGTAC 59.905 45.833 10.38 0.00 41.78 2.73
366 367 5.245531 CCAATCTTGTAGCCTTCAAGTACA 58.754 41.667 10.38 0.00 41.78 2.90
367 368 5.705441 CCAATCTTGTAGCCTTCAAGTACAA 59.295 40.000 10.38 1.75 41.78 2.41
368 369 6.348540 CCAATCTTGTAGCCTTCAAGTACAAC 60.349 42.308 10.38 0.00 41.78 3.32
369 370 5.284861 TCTTGTAGCCTTCAAGTACAACA 57.715 39.130 10.38 0.00 41.78 3.33
370 371 5.297547 TCTTGTAGCCTTCAAGTACAACAG 58.702 41.667 10.38 0.00 41.78 3.16
371 372 4.682778 TGTAGCCTTCAAGTACAACAGT 57.317 40.909 0.00 0.00 0.00 3.55
372 373 5.794726 TGTAGCCTTCAAGTACAACAGTA 57.205 39.130 0.00 0.00 0.00 2.74
373 374 6.164417 TGTAGCCTTCAAGTACAACAGTAA 57.836 37.500 0.00 0.00 0.00 2.24
374 375 6.220930 TGTAGCCTTCAAGTACAACAGTAAG 58.779 40.000 0.00 0.00 0.00 2.34
375 376 5.546621 AGCCTTCAAGTACAACAGTAAGA 57.453 39.130 0.00 0.00 0.00 2.10
376 377 6.115448 AGCCTTCAAGTACAACAGTAAGAT 57.885 37.500 0.00 0.00 0.00 2.40
377 378 7.241042 AGCCTTCAAGTACAACAGTAAGATA 57.759 36.000 0.00 0.00 0.00 1.98
378 379 7.097834 AGCCTTCAAGTACAACAGTAAGATAC 58.902 38.462 0.00 0.00 0.00 2.24
379 380 6.872020 GCCTTCAAGTACAACAGTAAGATACA 59.128 38.462 0.00 0.00 0.00 2.29
380 381 7.386848 GCCTTCAAGTACAACAGTAAGATACAA 59.613 37.037 0.00 0.00 0.00 2.41
381 382 9.268268 CCTTCAAGTACAACAGTAAGATACAAA 57.732 33.333 0.00 0.00 0.00 2.83
386 387 9.998106 AAGTACAACAGTAAGATACAAAGATGT 57.002 29.630 0.00 0.00 43.74 3.06
387 388 9.424319 AGTACAACAGTAAGATACAAAGATGTG 57.576 33.333 0.00 0.00 40.84 3.21
388 389 7.133891 ACAACAGTAAGATACAAAGATGTGC 57.866 36.000 0.00 0.00 40.84 4.57
389 390 6.936900 ACAACAGTAAGATACAAAGATGTGCT 59.063 34.615 0.00 0.00 40.84 4.40
390 391 8.094548 ACAACAGTAAGATACAAAGATGTGCTA 58.905 33.333 0.00 0.00 40.84 3.49
391 392 8.383619 CAACAGTAAGATACAAAGATGTGCTAC 58.616 37.037 0.00 0.00 40.84 3.58
392 393 7.841956 ACAGTAAGATACAAAGATGTGCTACT 58.158 34.615 0.00 0.00 40.84 2.57
393 394 8.314751 ACAGTAAGATACAAAGATGTGCTACTT 58.685 33.333 0.00 0.00 40.84 2.24
394 395 8.812329 CAGTAAGATACAAAGATGTGCTACTTC 58.188 37.037 0.00 0.00 40.84 3.01
395 396 8.531982 AGTAAGATACAAAGATGTGCTACTTCA 58.468 33.333 0.00 0.00 40.84 3.02
396 397 9.319143 GTAAGATACAAAGATGTGCTACTTCAT 57.681 33.333 0.00 0.00 40.84 2.57
397 398 8.798859 AAGATACAAAGATGTGCTACTTCATT 57.201 30.769 0.00 0.00 40.84 2.57
398 399 9.890629 AAGATACAAAGATGTGCTACTTCATTA 57.109 29.630 0.00 0.00 40.84 1.90
399 400 9.890629 AGATACAAAGATGTGCTACTTCATTAA 57.109 29.630 0.00 0.00 40.84 1.40
403 404 9.448438 ACAAAGATGTGCTACTTCATTAATACA 57.552 29.630 0.00 0.00 38.69 2.29
406 407 8.613060 AGATGTGCTACTTCATTAATACATGG 57.387 34.615 0.00 0.00 0.00 3.66
407 408 6.618287 TGTGCTACTTCATTAATACATGGC 57.382 37.500 0.00 0.00 0.00 4.40
408 409 5.530915 TGTGCTACTTCATTAATACATGGCC 59.469 40.000 0.00 0.00 0.00 5.36
409 410 5.048713 GTGCTACTTCATTAATACATGGCCC 60.049 44.000 0.00 0.00 0.00 5.80
410 411 5.070001 GCTACTTCATTAATACATGGCCCA 58.930 41.667 0.00 0.00 0.00 5.36
411 412 5.711976 GCTACTTCATTAATACATGGCCCAT 59.288 40.000 0.00 0.00 0.00 4.00
412 413 6.127897 GCTACTTCATTAATACATGGCCCATC 60.128 42.308 0.00 0.00 0.00 3.51
413 414 5.957132 ACTTCATTAATACATGGCCCATCT 58.043 37.500 0.00 0.00 0.00 2.90
414 415 6.006449 ACTTCATTAATACATGGCCCATCTC 58.994 40.000 0.00 0.00 0.00 2.75
415 416 4.922206 TCATTAATACATGGCCCATCTCC 58.078 43.478 0.00 0.00 0.00 3.71
416 417 3.806949 TTAATACATGGCCCATCTCCC 57.193 47.619 0.00 0.00 0.00 4.30
417 418 1.533187 AATACATGGCCCATCTCCCA 58.467 50.000 0.00 0.00 35.21 4.37
418 419 1.764327 ATACATGGCCCATCTCCCAT 58.236 50.000 0.00 0.00 42.41 4.00
419 420 1.533187 TACATGGCCCATCTCCCATT 58.467 50.000 0.00 0.00 39.76 3.16
420 421 1.533187 ACATGGCCCATCTCCCATTA 58.467 50.000 0.00 0.00 39.76 1.90
421 422 2.076189 ACATGGCCCATCTCCCATTAT 58.924 47.619 0.00 0.00 39.76 1.28
422 423 2.042162 ACATGGCCCATCTCCCATTATC 59.958 50.000 0.00 0.00 39.76 1.75
423 424 1.831835 TGGCCCATCTCCCATTATCA 58.168 50.000 0.00 0.00 0.00 2.15
424 425 1.425066 TGGCCCATCTCCCATTATCAC 59.575 52.381 0.00 0.00 0.00 3.06
425 426 1.425066 GGCCCATCTCCCATTATCACA 59.575 52.381 0.00 0.00 0.00 3.58
426 427 2.042162 GGCCCATCTCCCATTATCACAT 59.958 50.000 0.00 0.00 0.00 3.21
427 428 3.266772 GGCCCATCTCCCATTATCACATA 59.733 47.826 0.00 0.00 0.00 2.29
428 429 4.521146 GCCCATCTCCCATTATCACATAG 58.479 47.826 0.00 0.00 0.00 2.23
429 430 4.018960 GCCCATCTCCCATTATCACATAGT 60.019 45.833 0.00 0.00 0.00 2.12
430 431 5.494724 CCCATCTCCCATTATCACATAGTG 58.505 45.833 0.00 0.00 34.45 2.74
431 432 4.940046 CCATCTCCCATTATCACATAGTGC 59.060 45.833 0.00 0.00 32.98 4.40
432 433 4.623932 TCTCCCATTATCACATAGTGCC 57.376 45.455 0.00 0.00 32.98 5.01
433 434 4.234550 TCTCCCATTATCACATAGTGCCT 58.765 43.478 0.00 0.00 32.98 4.75
434 435 5.402630 TCTCCCATTATCACATAGTGCCTA 58.597 41.667 0.00 0.00 32.98 3.93
435 436 5.481824 TCTCCCATTATCACATAGTGCCTAG 59.518 44.000 0.00 0.00 32.98 3.02
436 437 5.402630 TCCCATTATCACATAGTGCCTAGA 58.597 41.667 0.00 0.00 32.98 2.43
437 438 5.843969 TCCCATTATCACATAGTGCCTAGAA 59.156 40.000 0.00 0.00 32.98 2.10
438 439 6.014242 TCCCATTATCACATAGTGCCTAGAAG 60.014 42.308 0.00 0.00 32.98 2.85
439 440 5.641209 CCATTATCACATAGTGCCTAGAAGC 59.359 44.000 0.00 0.00 32.98 3.86
440 441 5.869649 TTATCACATAGTGCCTAGAAGCA 57.130 39.130 0.00 0.00 41.46 3.91
455 456 3.159984 GCACGTGCTGTAGCTGAC 58.840 61.111 32.55 0.00 42.66 3.51
456 457 1.373497 GCACGTGCTGTAGCTGACT 60.373 57.895 32.55 0.00 42.66 3.41
457 458 1.347817 GCACGTGCTGTAGCTGACTC 61.348 60.000 32.55 0.00 42.66 3.36
458 459 0.242286 CACGTGCTGTAGCTGACTCT 59.758 55.000 0.82 0.00 42.66 3.24
459 460 0.962489 ACGTGCTGTAGCTGACTCTT 59.038 50.000 5.38 0.00 42.66 2.85
460 461 2.095212 CACGTGCTGTAGCTGACTCTTA 60.095 50.000 0.82 0.00 42.66 2.10
461 462 2.755655 ACGTGCTGTAGCTGACTCTTAT 59.244 45.455 5.38 0.00 42.66 1.73
462 463 3.193691 ACGTGCTGTAGCTGACTCTTATT 59.806 43.478 5.38 0.00 42.66 1.40
463 464 3.794028 CGTGCTGTAGCTGACTCTTATTC 59.206 47.826 5.38 0.00 42.66 1.75
464 465 4.439426 CGTGCTGTAGCTGACTCTTATTCT 60.439 45.833 5.38 0.00 42.66 2.40
465 466 5.040635 GTGCTGTAGCTGACTCTTATTCTC 58.959 45.833 5.38 0.00 42.66 2.87
466 467 4.952957 TGCTGTAGCTGACTCTTATTCTCT 59.047 41.667 5.38 0.00 42.66 3.10
467 468 6.038825 GTGCTGTAGCTGACTCTTATTCTCTA 59.961 42.308 5.38 0.00 42.66 2.43
468 469 6.262049 TGCTGTAGCTGACTCTTATTCTCTAG 59.738 42.308 5.38 0.00 42.66 2.43
469 470 6.627395 TGTAGCTGACTCTTATTCTCTAGC 57.373 41.667 0.00 0.00 0.00 3.42
470 471 5.533154 TGTAGCTGACTCTTATTCTCTAGCC 59.467 44.000 0.00 0.00 0.00 3.93
471 472 3.568007 AGCTGACTCTTATTCTCTAGCCG 59.432 47.826 0.00 0.00 0.00 5.52
472 473 3.566322 GCTGACTCTTATTCTCTAGCCGA 59.434 47.826 0.00 0.00 0.00 5.54
473 474 4.555906 GCTGACTCTTATTCTCTAGCCGAC 60.556 50.000 0.00 0.00 0.00 4.79
474 475 4.783055 TGACTCTTATTCTCTAGCCGACT 58.217 43.478 0.00 0.00 0.00 4.18
475 476 4.817464 TGACTCTTATTCTCTAGCCGACTC 59.183 45.833 0.00 0.00 0.00 3.36
476 477 4.139038 ACTCTTATTCTCTAGCCGACTCC 58.861 47.826 0.00 0.00 0.00 3.85
477 478 4.141344 ACTCTTATTCTCTAGCCGACTCCT 60.141 45.833 0.00 0.00 0.00 3.69
478 479 4.391155 TCTTATTCTCTAGCCGACTCCTC 58.609 47.826 0.00 0.00 0.00 3.71
479 480 4.103469 TCTTATTCTCTAGCCGACTCCTCT 59.897 45.833 0.00 0.00 0.00 3.69
480 481 2.810870 TTCTCTAGCCGACTCCTCTT 57.189 50.000 0.00 0.00 0.00 2.85
481 482 2.335316 TCTCTAGCCGACTCCTCTTC 57.665 55.000 0.00 0.00 0.00 2.87
482 483 1.841277 TCTCTAGCCGACTCCTCTTCT 59.159 52.381 0.00 0.00 0.00 2.85
483 484 2.158871 TCTCTAGCCGACTCCTCTTCTC 60.159 54.545 0.00 0.00 0.00 2.87
484 485 1.841277 TCTAGCCGACTCCTCTTCTCT 59.159 52.381 0.00 0.00 0.00 3.10
485 486 2.158871 TCTAGCCGACTCCTCTTCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
486 487 0.623723 AGCCGACTCCTCTTCTCTCT 59.376 55.000 0.00 0.00 0.00 3.10
487 488 1.005450 AGCCGACTCCTCTTCTCTCTT 59.995 52.381 0.00 0.00 0.00 2.85
488 489 1.404035 GCCGACTCCTCTTCTCTCTTC 59.596 57.143 0.00 0.00 0.00 2.87
489 490 2.944094 GCCGACTCCTCTTCTCTCTTCT 60.944 54.545 0.00 0.00 0.00 2.85
490 491 2.943033 CCGACTCCTCTTCTCTCTTCTC 59.057 54.545 0.00 0.00 0.00 2.87
491 492 3.370527 CCGACTCCTCTTCTCTCTTCTCT 60.371 52.174 0.00 0.00 0.00 3.10
492 493 4.261801 CGACTCCTCTTCTCTCTTCTCTT 58.738 47.826 0.00 0.00 0.00 2.85
493 494 4.332819 CGACTCCTCTTCTCTCTTCTCTTC 59.667 50.000 0.00 0.00 0.00 2.87
494 495 5.501156 GACTCCTCTTCTCTCTTCTCTTCT 58.499 45.833 0.00 0.00 0.00 2.85
495 496 5.501156 ACTCCTCTTCTCTCTTCTCTTCTC 58.499 45.833 0.00 0.00 0.00 2.87
496 497 5.251700 ACTCCTCTTCTCTCTTCTCTTCTCT 59.748 44.000 0.00 0.00 0.00 3.10
497 498 6.139679 TCCTCTTCTCTCTTCTCTTCTCTT 57.860 41.667 0.00 0.00 0.00 2.85
498 499 6.180472 TCCTCTTCTCTCTTCTCTTCTCTTC 58.820 44.000 0.00 0.00 0.00 2.87
499 500 5.358160 CCTCTTCTCTCTTCTCTTCTCTTCC 59.642 48.000 0.00 0.00 0.00 3.46
500 501 5.261216 TCTTCTCTCTTCTCTTCTCTTCCC 58.739 45.833 0.00 0.00 0.00 3.97
501 502 4.946160 TCTCTCTTCTCTTCTCTTCCCT 57.054 45.455 0.00 0.00 0.00 4.20
502 503 4.855340 TCTCTCTTCTCTTCTCTTCCCTC 58.145 47.826 0.00 0.00 0.00 4.30
503 504 3.954258 CTCTCTTCTCTTCTCTTCCCTCC 59.046 52.174 0.00 0.00 0.00 4.30
504 505 3.335183 TCTCTTCTCTTCTCTTCCCTCCA 59.665 47.826 0.00 0.00 0.00 3.86
505 506 3.436243 TCTTCTCTTCTCTTCCCTCCAC 58.564 50.000 0.00 0.00 0.00 4.02
506 507 1.840737 TCTCTTCTCTTCCCTCCACG 58.159 55.000 0.00 0.00 0.00 4.94
507 508 1.075698 TCTCTTCTCTTCCCTCCACGT 59.924 52.381 0.00 0.00 0.00 4.49
508 509 1.474879 CTCTTCTCTTCCCTCCACGTC 59.525 57.143 0.00 0.00 0.00 4.34
509 510 1.203013 TCTTCTCTTCCCTCCACGTCA 60.203 52.381 0.00 0.00 0.00 4.35
510 511 1.203523 CTTCTCTTCCCTCCACGTCAG 59.796 57.143 0.00 0.00 0.00 3.51
511 512 1.216710 CTCTTCCCTCCACGTCAGC 59.783 63.158 0.00 0.00 0.00 4.26
512 513 1.533033 TCTTCCCTCCACGTCAGCA 60.533 57.895 0.00 0.00 0.00 4.41
513 514 1.079543 CTTCCCTCCACGTCAGCAG 60.080 63.158 0.00 0.00 0.00 4.24
514 515 1.533033 TTCCCTCCACGTCAGCAGA 60.533 57.895 0.00 0.00 0.00 4.26
515 516 1.118965 TTCCCTCCACGTCAGCAGAA 61.119 55.000 0.00 0.00 0.00 3.02
516 517 1.118965 TCCCTCCACGTCAGCAGAAA 61.119 55.000 0.00 0.00 0.00 2.52
517 518 0.250295 CCCTCCACGTCAGCAGAAAA 60.250 55.000 0.00 0.00 0.00 2.29
518 519 1.593196 CCTCCACGTCAGCAGAAAAA 58.407 50.000 0.00 0.00 0.00 1.94
519 520 2.154462 CCTCCACGTCAGCAGAAAAAT 58.846 47.619 0.00 0.00 0.00 1.82
520 521 2.554032 CCTCCACGTCAGCAGAAAAATT 59.446 45.455 0.00 0.00 0.00 1.82
521 522 3.751175 CCTCCACGTCAGCAGAAAAATTA 59.249 43.478 0.00 0.00 0.00 1.40
522 523 4.396166 CCTCCACGTCAGCAGAAAAATTAT 59.604 41.667 0.00 0.00 0.00 1.28
523 524 5.584649 CCTCCACGTCAGCAGAAAAATTATA 59.415 40.000 0.00 0.00 0.00 0.98
524 525 6.260936 CCTCCACGTCAGCAGAAAAATTATAT 59.739 38.462 0.00 0.00 0.00 0.86
525 526 7.201732 CCTCCACGTCAGCAGAAAAATTATATT 60.202 37.037 0.00 0.00 0.00 1.28
526 527 8.050778 TCCACGTCAGCAGAAAAATTATATTT 57.949 30.769 0.00 0.00 0.00 1.40
527 528 8.519526 TCCACGTCAGCAGAAAAATTATATTTT 58.480 29.630 0.00 0.00 35.29 1.82
528 529 9.781834 CCACGTCAGCAGAAAAATTATATTTTA 57.218 29.630 0.00 0.00 32.85 1.52
544 545 9.813826 ATTATATTTTAATCCTTACAGCCTGCT 57.186 29.630 0.00 0.00 0.00 4.24
545 546 9.640952 TTATATTTTAATCCTTACAGCCTGCTT 57.359 29.630 0.00 0.00 0.00 3.91
547 548 6.753107 TTTTAATCCTTACAGCCTGCTTAC 57.247 37.500 0.00 0.00 0.00 2.34
548 549 5.429681 TTAATCCTTACAGCCTGCTTACA 57.570 39.130 0.00 0.00 0.00 2.41
549 550 4.510167 AATCCTTACAGCCTGCTTACAT 57.490 40.909 0.00 0.00 0.00 2.29
550 551 5.630415 AATCCTTACAGCCTGCTTACATA 57.370 39.130 0.00 0.00 0.00 2.29
551 552 5.630415 ATCCTTACAGCCTGCTTACATAA 57.370 39.130 0.00 0.00 0.00 1.90
552 553 5.023533 TCCTTACAGCCTGCTTACATAAG 57.976 43.478 0.00 0.00 36.40 1.73
620 621 1.812571 GGCTCGATGATTGTTTGTGGT 59.187 47.619 0.00 0.00 0.00 4.16
658 659 1.342819 CCCAAGATCGATCTCTGGGAC 59.657 57.143 39.41 15.74 46.62 4.46
673 678 1.218316 GGACGTGGGTGTCTCATCC 59.782 63.158 0.00 0.00 38.91 3.51
674 679 1.153823 GACGTGGGTGTCTCATCCG 60.154 63.158 0.00 0.00 37.47 4.18
697 919 2.593257 GTACCTCACACGTCTACAAGC 58.407 52.381 0.00 0.00 0.00 4.01
698 920 0.317479 ACCTCACACGTCTACAAGCC 59.683 55.000 0.00 0.00 0.00 4.35
699 921 0.603569 CCTCACACGTCTACAAGCCT 59.396 55.000 0.00 0.00 0.00 4.58
700 922 1.000955 CCTCACACGTCTACAAGCCTT 59.999 52.381 0.00 0.00 0.00 4.35
701 923 2.061773 CTCACACGTCTACAAGCCTTG 58.938 52.381 2.11 2.11 0.00 3.61
703 925 1.045407 ACACGTCTACAAGCCTTGGA 58.955 50.000 9.64 0.00 34.12 3.53
704 926 1.414919 ACACGTCTACAAGCCTTGGAA 59.585 47.619 9.64 0.00 34.12 3.53
705 927 2.158871 ACACGTCTACAAGCCTTGGAAA 60.159 45.455 9.64 0.00 34.12 3.13
745 967 6.346096 TGTATAGGTTGTAGATCTTGGTTGC 58.654 40.000 0.00 0.00 0.00 4.17
773 1004 1.636988 GGGTGTATAGTGCGTGTGAC 58.363 55.000 0.00 0.00 0.00 3.67
820 1051 0.390340 CGATACGGCTGGATGGATGG 60.390 60.000 0.00 0.00 0.00 3.51
821 1052 0.976641 GATACGGCTGGATGGATGGA 59.023 55.000 0.00 0.00 0.00 3.41
822 1053 1.556911 GATACGGCTGGATGGATGGAT 59.443 52.381 0.00 0.00 0.00 3.41
823 1054 0.686789 TACGGCTGGATGGATGGATG 59.313 55.000 0.00 0.00 0.00 3.51
1511 1796 8.957028 CATGCCACGTAAAATGATTTAATACTG 58.043 33.333 0.00 0.00 32.98 2.74
1512 1797 6.970043 TGCCACGTAAAATGATTTAATACTGC 59.030 34.615 0.00 0.00 32.98 4.40
1513 1798 7.148154 TGCCACGTAAAATGATTTAATACTGCT 60.148 33.333 0.00 0.00 32.98 4.24
1514 1799 8.339714 GCCACGTAAAATGATTTAATACTGCTA 58.660 33.333 0.00 0.00 32.98 3.49
1525 1810 9.750125 TGATTTAATACTGCTATATATCTGCGG 57.250 33.333 14.36 14.36 38.86 5.69
1526 1811 9.197694 GATTTAATACTGCTATATATCTGCGGG 57.802 37.037 18.07 10.72 37.40 6.13
1527 1812 7.891498 TTAATACTGCTATATATCTGCGGGA 57.109 36.000 18.07 12.94 37.40 5.14
1528 1813 6.398234 AATACTGCTATATATCTGCGGGAG 57.602 41.667 18.07 8.61 37.40 4.30
1529 1814 3.969553 ACTGCTATATATCTGCGGGAGA 58.030 45.455 18.07 0.46 37.40 3.71
1618 2427 4.101448 GGTGAGGCGGTGCAGGAT 62.101 66.667 0.00 0.00 0.00 3.24
1627 2436 1.691219 GGTGCAGGATTGGAGGGAA 59.309 57.895 0.00 0.00 0.00 3.97
1687 2496 3.327404 GGGAGGTGGCCGGAGAAA 61.327 66.667 5.05 0.00 0.00 2.52
2299 3133 0.985490 GGAGGAGCCCATCACCTTCT 60.985 60.000 0.00 0.00 35.81 2.85
2468 3304 4.929808 GTCTCTCAACGAAATTCTTGCCTA 59.070 41.667 0.00 0.00 0.00 3.93
2483 3319 1.293498 CCTAGATCATTCCGGCGGG 59.707 63.158 27.98 10.57 0.00 6.13
2500 3336 1.399727 CGGGGCGCGATTCAATATTTC 60.400 52.381 20.10 0.00 0.00 2.17
2509 3346 7.325821 GGCGCGATTCAATATTTCAATTGATTA 59.674 33.333 12.10 5.11 43.50 1.75
2723 3571 1.758592 TGTGGTTGGGCTACACTCC 59.241 57.895 0.00 0.00 33.49 3.85
2748 3596 1.002468 GTGTGCACATGAGTTGTCCAC 60.002 52.381 24.69 0.91 45.62 4.02
2820 3668 4.006989 ACGATGCATAACTTGGCAGTTAA 58.993 39.130 0.00 0.29 46.45 2.01
2875 3724 0.595095 CCTTTTGCTCTCAGTGGTGC 59.405 55.000 0.00 0.00 0.00 5.01
3115 3966 0.878523 GTGTGCGATATAAGCGGGCA 60.879 55.000 0.00 0.00 37.44 5.36
3335 4186 1.530323 TGTCGATCTTCGTCTGTCCA 58.470 50.000 0.00 0.00 41.35 4.02
3428 4279 3.545703 CAGCGAGAATGGGGTAAGAATT 58.454 45.455 0.00 0.00 0.00 2.17
3429 4280 4.703897 CAGCGAGAATGGGGTAAGAATTA 58.296 43.478 0.00 0.00 0.00 1.40
3514 4369 4.724399 TGCAGGTGAAATGTTTCTTCCTA 58.276 39.130 16.15 5.97 38.81 2.94
3528 4384 4.100279 TCTTCCTATGGTCGATGCTCTA 57.900 45.455 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.596083 GTCGCATGAGGGAGTGATCG 60.596 60.000 0.00 0.00 37.39 3.69
7 8 0.249657 GGTCGCATGAGGGAGTGATC 60.250 60.000 0.00 0.00 37.39 2.92
8 9 0.977627 TGGTCGCATGAGGGAGTGAT 60.978 55.000 0.00 0.00 37.39 3.06
9 10 1.609210 TGGTCGCATGAGGGAGTGA 60.609 57.895 0.00 0.00 37.39 3.41
10 11 1.448540 GTGGTCGCATGAGGGAGTG 60.449 63.158 0.00 0.00 37.39 3.51
11 12 2.982130 GTGGTCGCATGAGGGAGT 59.018 61.111 0.00 0.00 37.39 3.85
12 13 2.021068 ATCGTGGTCGCATGAGGGAG 62.021 60.000 0.00 0.00 37.39 4.30
13 14 2.058001 ATCGTGGTCGCATGAGGGA 61.058 57.895 0.00 0.00 36.96 4.20
14 15 1.884464 CATCGTGGTCGCATGAGGG 60.884 63.158 0.00 0.00 36.96 4.30
15 16 0.460109 TTCATCGTGGTCGCATGAGG 60.460 55.000 0.00 0.00 36.18 3.86
16 17 1.259770 CATTCATCGTGGTCGCATGAG 59.740 52.381 0.00 0.00 36.18 2.90
17 18 1.134848 TCATTCATCGTGGTCGCATGA 60.135 47.619 0.00 0.00 34.53 3.07
18 19 1.289276 TCATTCATCGTGGTCGCATG 58.711 50.000 0.00 0.00 36.96 4.06
19 20 1.869132 CATCATTCATCGTGGTCGCAT 59.131 47.619 0.00 0.00 36.96 4.73
20 21 1.134848 TCATCATTCATCGTGGTCGCA 60.135 47.619 0.00 0.00 36.96 5.10
21 22 1.570813 TCATCATTCATCGTGGTCGC 58.429 50.000 0.00 0.00 36.96 5.19
22 23 4.521010 CAAATCATCATTCATCGTGGTCG 58.479 43.478 0.00 0.00 38.55 4.79
23 24 4.285292 GCAAATCATCATTCATCGTGGTC 58.715 43.478 0.00 0.00 0.00 4.02
24 25 3.067180 GGCAAATCATCATTCATCGTGGT 59.933 43.478 0.00 0.00 0.00 4.16
25 26 3.067040 TGGCAAATCATCATTCATCGTGG 59.933 43.478 0.00 0.00 0.00 4.94
26 27 4.295857 TGGCAAATCATCATTCATCGTG 57.704 40.909 0.00 0.00 0.00 4.35
27 28 4.987408 TTGGCAAATCATCATTCATCGT 57.013 36.364 0.00 0.00 0.00 3.73
28 29 6.072342 TCCTATTGGCAAATCATCATTCATCG 60.072 38.462 3.01 0.00 0.00 3.84
29 30 7.176165 TCTCCTATTGGCAAATCATCATTCATC 59.824 37.037 3.01 0.00 0.00 2.92
30 31 7.008332 TCTCCTATTGGCAAATCATCATTCAT 58.992 34.615 3.01 0.00 0.00 2.57
31 32 6.263842 GTCTCCTATTGGCAAATCATCATTCA 59.736 38.462 3.01 0.00 0.00 2.57
32 33 6.294397 GGTCTCCTATTGGCAAATCATCATTC 60.294 42.308 3.01 0.00 0.00 2.67
33 34 5.537674 GGTCTCCTATTGGCAAATCATCATT 59.462 40.000 3.01 0.00 0.00 2.57
34 35 5.075493 GGTCTCCTATTGGCAAATCATCAT 58.925 41.667 3.01 0.00 0.00 2.45
35 36 4.464008 GGTCTCCTATTGGCAAATCATCA 58.536 43.478 3.01 0.00 0.00 3.07
36 37 3.499918 CGGTCTCCTATTGGCAAATCATC 59.500 47.826 3.01 0.00 0.00 2.92
37 38 3.480470 CGGTCTCCTATTGGCAAATCAT 58.520 45.455 3.01 0.00 0.00 2.45
38 39 2.917933 CGGTCTCCTATTGGCAAATCA 58.082 47.619 3.01 0.00 0.00 2.57
39 40 1.604278 GCGGTCTCCTATTGGCAAATC 59.396 52.381 3.01 0.00 0.00 2.17
40 41 1.064758 TGCGGTCTCCTATTGGCAAAT 60.065 47.619 3.01 0.00 0.00 2.32
41 42 0.326595 TGCGGTCTCCTATTGGCAAA 59.673 50.000 3.01 0.00 0.00 3.68
42 43 0.546122 ATGCGGTCTCCTATTGGCAA 59.454 50.000 0.68 0.68 33.72 4.52
43 44 0.106708 GATGCGGTCTCCTATTGGCA 59.893 55.000 0.00 0.00 34.60 4.92
44 45 0.946221 CGATGCGGTCTCCTATTGGC 60.946 60.000 0.00 0.00 0.00 4.52
45 46 0.389391 ACGATGCGGTCTCCTATTGG 59.611 55.000 0.00 0.00 0.00 3.16
46 47 1.491670 CACGATGCGGTCTCCTATTG 58.508 55.000 0.00 0.00 0.00 1.90
47 48 0.249489 GCACGATGCGGTCTCCTATT 60.249 55.000 0.00 0.00 31.71 1.73
48 49 1.364171 GCACGATGCGGTCTCCTAT 59.636 57.895 0.00 0.00 31.71 2.57
49 50 2.782222 GGCACGATGCGGTCTCCTA 61.782 63.158 0.00 0.00 46.21 2.94
50 51 4.148825 GGCACGATGCGGTCTCCT 62.149 66.667 0.00 0.00 46.21 3.69
52 53 3.950794 TTGGGCACGATGCGGTCTC 62.951 63.158 0.00 0.00 46.21 3.36
53 54 3.545124 TTTGGGCACGATGCGGTCT 62.545 57.895 0.00 0.00 46.21 3.85
54 55 3.039202 CTTTGGGCACGATGCGGTC 62.039 63.158 0.00 0.00 46.21 4.79
55 56 3.055719 CTTTGGGCACGATGCGGT 61.056 61.111 0.00 0.00 46.21 5.68
56 57 2.745884 TCTTTGGGCACGATGCGG 60.746 61.111 0.00 0.00 46.21 5.69
57 58 2.480555 GTCTTTGGGCACGATGCG 59.519 61.111 0.00 0.00 46.21 4.73
58 59 1.971167 TGGTCTTTGGGCACGATGC 60.971 57.895 0.00 0.00 44.08 3.91
59 60 1.586154 GGTGGTCTTTGGGCACGATG 61.586 60.000 0.00 0.00 0.00 3.84
60 61 1.303317 GGTGGTCTTTGGGCACGAT 60.303 57.895 0.00 0.00 0.00 3.73
61 62 1.990160 AAGGTGGTCTTTGGGCACGA 61.990 55.000 0.00 0.00 29.99 4.35
62 63 1.528309 AAGGTGGTCTTTGGGCACG 60.528 57.895 0.00 0.00 29.99 5.34
63 64 0.467290 TCAAGGTGGTCTTTGGGCAC 60.467 55.000 0.00 0.00 32.41 5.01
64 65 0.178992 CTCAAGGTGGTCTTTGGGCA 60.179 55.000 0.00 0.00 32.41 5.36
65 66 0.895559 CCTCAAGGTGGTCTTTGGGC 60.896 60.000 0.00 0.00 31.02 5.36
66 67 0.771127 TCCTCAAGGTGGTCTTTGGG 59.229 55.000 0.00 0.00 36.34 4.12
67 68 1.878102 CGTCCTCAAGGTGGTCTTTGG 60.878 57.143 0.00 0.00 36.34 3.28
68 69 1.512926 CGTCCTCAAGGTGGTCTTTG 58.487 55.000 0.00 0.00 36.34 2.77
69 70 0.250338 GCGTCCTCAAGGTGGTCTTT 60.250 55.000 0.00 0.00 36.34 2.52
70 71 1.371558 GCGTCCTCAAGGTGGTCTT 59.628 57.895 0.00 0.00 36.34 3.01
71 72 1.407656 TTGCGTCCTCAAGGTGGTCT 61.408 55.000 0.00 0.00 36.34 3.85
72 73 0.321653 ATTGCGTCCTCAAGGTGGTC 60.322 55.000 0.00 0.00 36.34 4.02
73 74 0.110486 AATTGCGTCCTCAAGGTGGT 59.890 50.000 0.00 0.00 36.34 4.16
74 75 1.200020 GAAATTGCGTCCTCAAGGTGG 59.800 52.381 0.00 0.00 36.34 4.61
75 76 1.135972 CGAAATTGCGTCCTCAAGGTG 60.136 52.381 0.00 0.00 36.34 4.00
76 77 1.156736 CGAAATTGCGTCCTCAAGGT 58.843 50.000 0.00 0.00 36.34 3.50
77 78 0.447801 CCGAAATTGCGTCCTCAAGG 59.552 55.000 4.84 0.00 0.00 3.61
78 79 1.394917 CTCCGAAATTGCGTCCTCAAG 59.605 52.381 4.84 0.00 0.00 3.02
79 80 1.001520 TCTCCGAAATTGCGTCCTCAA 59.998 47.619 4.84 0.00 0.00 3.02
80 81 0.606096 TCTCCGAAATTGCGTCCTCA 59.394 50.000 4.84 0.00 0.00 3.86
81 82 1.594862 CATCTCCGAAATTGCGTCCTC 59.405 52.381 4.84 0.00 0.00 3.71
82 83 1.656652 CATCTCCGAAATTGCGTCCT 58.343 50.000 4.84 0.00 0.00 3.85
83 84 0.657840 CCATCTCCGAAATTGCGTCC 59.342 55.000 4.84 0.00 0.00 4.79
84 85 1.369625 ACCATCTCCGAAATTGCGTC 58.630 50.000 4.84 0.00 0.00 5.19
85 86 2.684001 TACCATCTCCGAAATTGCGT 57.316 45.000 4.84 0.00 0.00 5.24
86 87 4.750098 AGTTATACCATCTCCGAAATTGCG 59.250 41.667 0.00 0.00 0.00 4.85
87 88 5.992217 AGAGTTATACCATCTCCGAAATTGC 59.008 40.000 0.00 0.00 0.00 3.56
88 89 9.712305 ATTAGAGTTATACCATCTCCGAAATTG 57.288 33.333 0.00 0.00 0.00 2.32
91 92 9.760077 GAAATTAGAGTTATACCATCTCCGAAA 57.240 33.333 0.00 0.00 0.00 3.46
92 93 8.920174 TGAAATTAGAGTTATACCATCTCCGAA 58.080 33.333 0.00 0.00 0.00 4.30
93 94 8.473358 TGAAATTAGAGTTATACCATCTCCGA 57.527 34.615 0.00 0.00 0.00 4.55
94 95 9.712305 AATGAAATTAGAGTTATACCATCTCCG 57.288 33.333 0.00 0.00 32.46 4.63
143 144 6.216456 AGAATGTGGGCCCCATATTTTAAAAA 59.784 34.615 23.82 0.00 43.57 1.94
144 145 5.728741 AGAATGTGGGCCCCATATTTTAAAA 59.271 36.000 23.82 2.51 43.57 1.52
145 146 5.284582 AGAATGTGGGCCCCATATTTTAAA 58.715 37.500 23.82 0.00 43.57 1.52
146 147 4.889780 AGAATGTGGGCCCCATATTTTAA 58.110 39.130 23.82 0.00 43.57 1.52
147 148 4.551215 AGAATGTGGGCCCCATATTTTA 57.449 40.909 23.82 0.00 43.57 1.52
148 149 3.419732 AGAATGTGGGCCCCATATTTT 57.580 42.857 23.82 16.64 43.57 1.82
149 150 4.551215 TTAGAATGTGGGCCCCATATTT 57.449 40.909 23.82 16.04 43.57 1.40
150 151 4.765195 ATTAGAATGTGGGCCCCATATT 57.235 40.909 23.30 23.30 45.60 1.28
151 152 4.765195 AATTAGAATGTGGGCCCCATAT 57.235 40.909 22.27 5.77 36.93 1.78
152 153 4.479158 GAAATTAGAATGTGGGCCCCATA 58.521 43.478 22.27 2.53 35.28 2.74
153 154 3.308401 GAAATTAGAATGTGGGCCCCAT 58.692 45.455 22.27 19.34 35.28 4.00
154 155 2.745968 GAAATTAGAATGTGGGCCCCA 58.254 47.619 22.27 17.75 0.00 4.96
155 156 1.681264 CGAAATTAGAATGTGGGCCCC 59.319 52.381 22.27 11.72 0.00 5.80
156 157 1.067060 GCGAAATTAGAATGTGGGCCC 59.933 52.381 17.59 17.59 0.00 5.80
157 158 1.067060 GGCGAAATTAGAATGTGGGCC 59.933 52.381 0.00 0.00 0.00 5.80
158 159 2.024414 AGGCGAAATTAGAATGTGGGC 58.976 47.619 0.00 0.00 0.00 5.36
159 160 2.287915 CGAGGCGAAATTAGAATGTGGG 59.712 50.000 0.00 0.00 0.00 4.61
160 161 2.287915 CCGAGGCGAAATTAGAATGTGG 59.712 50.000 0.00 0.00 0.00 4.17
161 162 2.287915 CCCGAGGCGAAATTAGAATGTG 59.712 50.000 0.00 0.00 0.00 3.21
162 163 2.561569 CCCGAGGCGAAATTAGAATGT 58.438 47.619 0.00 0.00 0.00 2.71
163 164 1.264288 GCCCGAGGCGAAATTAGAATG 59.736 52.381 0.00 0.00 39.62 2.67
164 165 1.594331 GCCCGAGGCGAAATTAGAAT 58.406 50.000 0.00 0.00 39.62 2.40
165 166 3.074594 GCCCGAGGCGAAATTAGAA 57.925 52.632 0.00 0.00 39.62 2.10
166 167 4.848685 GCCCGAGGCGAAATTAGA 57.151 55.556 0.00 0.00 39.62 2.10
176 177 1.000896 AGATTTTGGGTGCCCGAGG 60.001 57.895 2.44 0.00 39.42 4.63
177 178 0.322456 TGAGATTTTGGGTGCCCGAG 60.322 55.000 2.44 0.00 39.42 4.63
178 179 0.322456 CTGAGATTTTGGGTGCCCGA 60.322 55.000 2.44 0.00 39.42 5.14
179 180 1.315257 CCTGAGATTTTGGGTGCCCG 61.315 60.000 2.44 0.00 39.42 6.13
180 181 0.039618 TCCTGAGATTTTGGGTGCCC 59.960 55.000 0.00 0.00 0.00 5.36
181 182 1.177401 GTCCTGAGATTTTGGGTGCC 58.823 55.000 0.00 0.00 0.00 5.01
182 183 1.177401 GGTCCTGAGATTTTGGGTGC 58.823 55.000 0.00 0.00 0.00 5.01
183 184 2.440409 CTGGTCCTGAGATTTTGGGTG 58.560 52.381 0.00 0.00 0.00 4.61
184 185 1.355720 CCTGGTCCTGAGATTTTGGGT 59.644 52.381 0.00 0.00 0.00 4.51
185 186 1.957113 GCCTGGTCCTGAGATTTTGGG 60.957 57.143 0.00 0.00 0.00 4.12
186 187 1.467920 GCCTGGTCCTGAGATTTTGG 58.532 55.000 0.00 0.00 0.00 3.28
187 188 1.005215 AGGCCTGGTCCTGAGATTTTG 59.995 52.381 3.11 0.00 34.56 2.44
188 189 1.376649 AGGCCTGGTCCTGAGATTTT 58.623 50.000 3.11 0.00 34.56 1.82
189 190 2.270434 TAGGCCTGGTCCTGAGATTT 57.730 50.000 17.99 0.00 37.01 2.17
190 191 2.441001 CAATAGGCCTGGTCCTGAGATT 59.559 50.000 17.99 0.00 37.01 2.40
191 192 2.053244 CAATAGGCCTGGTCCTGAGAT 58.947 52.381 17.99 0.00 37.01 2.75
192 193 1.008327 TCAATAGGCCTGGTCCTGAGA 59.992 52.381 17.99 10.26 37.01 3.27
193 194 1.500474 TCAATAGGCCTGGTCCTGAG 58.500 55.000 17.99 8.60 37.01 3.35
194 195 1.559682 GTTCAATAGGCCTGGTCCTGA 59.440 52.381 17.99 7.73 37.01 3.86
195 196 1.408822 GGTTCAATAGGCCTGGTCCTG 60.409 57.143 17.99 5.27 37.01 3.86
196 197 0.919710 GGTTCAATAGGCCTGGTCCT 59.080 55.000 17.99 13.10 40.21 3.85
197 198 0.106669 GGGTTCAATAGGCCTGGTCC 60.107 60.000 17.99 8.96 0.00 4.46
198 199 0.623723 TGGGTTCAATAGGCCTGGTC 59.376 55.000 17.99 0.00 0.00 4.02
199 200 0.331616 GTGGGTTCAATAGGCCTGGT 59.668 55.000 17.99 0.00 0.00 4.00
200 201 0.331278 TGTGGGTTCAATAGGCCTGG 59.669 55.000 17.99 4.87 0.00 4.45
201 202 1.818674 GTTGTGGGTTCAATAGGCCTG 59.181 52.381 17.99 0.00 0.00 4.85
202 203 1.710809 AGTTGTGGGTTCAATAGGCCT 59.289 47.619 11.78 11.78 0.00 5.19
203 204 2.215942 AGTTGTGGGTTCAATAGGCC 57.784 50.000 0.00 0.00 0.00 5.19
204 205 4.600692 AAAAGTTGTGGGTTCAATAGGC 57.399 40.909 0.00 0.00 0.00 3.93
205 206 6.589907 GCATAAAAAGTTGTGGGTTCAATAGG 59.410 38.462 0.00 0.00 0.00 2.57
206 207 7.329226 CAGCATAAAAAGTTGTGGGTTCAATAG 59.671 37.037 0.00 0.00 0.00 1.73
207 208 7.151308 CAGCATAAAAAGTTGTGGGTTCAATA 58.849 34.615 0.00 0.00 0.00 1.90
208 209 5.990996 CAGCATAAAAAGTTGTGGGTTCAAT 59.009 36.000 0.00 0.00 0.00 2.57
209 210 5.355596 CAGCATAAAAAGTTGTGGGTTCAA 58.644 37.500 0.00 0.00 0.00 2.69
210 211 4.202202 CCAGCATAAAAAGTTGTGGGTTCA 60.202 41.667 0.00 0.00 0.00 3.18
211 212 4.306600 CCAGCATAAAAAGTTGTGGGTTC 58.693 43.478 0.00 0.00 0.00 3.62
212 213 3.494223 GCCAGCATAAAAAGTTGTGGGTT 60.494 43.478 0.00 0.00 0.00 4.11
213 214 2.037121 GCCAGCATAAAAAGTTGTGGGT 59.963 45.455 0.00 0.00 0.00 4.51
214 215 2.036992 TGCCAGCATAAAAAGTTGTGGG 59.963 45.455 0.00 0.00 0.00 4.61
215 216 3.059166 GTGCCAGCATAAAAAGTTGTGG 58.941 45.455 0.00 0.00 0.00 4.17
216 217 3.059166 GGTGCCAGCATAAAAAGTTGTG 58.941 45.455 0.00 0.00 0.00 3.33
217 218 2.288152 CGGTGCCAGCATAAAAAGTTGT 60.288 45.455 0.00 0.00 0.00 3.32
218 219 2.327568 CGGTGCCAGCATAAAAAGTTG 58.672 47.619 0.00 0.00 0.00 3.16
219 220 1.336795 GCGGTGCCAGCATAAAAAGTT 60.337 47.619 0.00 0.00 34.19 2.66
220 221 0.243636 GCGGTGCCAGCATAAAAAGT 59.756 50.000 0.00 0.00 34.19 2.66
221 222 3.034569 GCGGTGCCAGCATAAAAAG 57.965 52.632 0.00 0.00 34.19 2.27
245 246 1.079405 ATCACTACACGGGGCAACG 60.079 57.895 0.00 0.00 40.31 4.10
246 247 0.321298 ACATCACTACACGGGGCAAC 60.321 55.000 0.00 0.00 0.00 4.17
247 248 0.321210 CACATCACTACACGGGGCAA 60.321 55.000 0.00 0.00 0.00 4.52
248 249 1.295101 CACATCACTACACGGGGCA 59.705 57.895 0.00 0.00 0.00 5.36
249 250 1.449601 CCACATCACTACACGGGGC 60.450 63.158 0.00 0.00 0.00 5.80
250 251 1.449601 GCCACATCACTACACGGGG 60.450 63.158 0.00 0.00 0.00 5.73
251 252 0.321210 TTGCCACATCACTACACGGG 60.321 55.000 0.00 0.00 0.00 5.28
252 253 1.078709 CTTGCCACATCACTACACGG 58.921 55.000 0.00 0.00 0.00 4.94
253 254 2.078849 TCTTGCCACATCACTACACG 57.921 50.000 0.00 0.00 0.00 4.49
254 255 3.138304 TGTTCTTGCCACATCACTACAC 58.862 45.455 0.00 0.00 0.00 2.90
255 256 3.483808 TGTTCTTGCCACATCACTACA 57.516 42.857 0.00 0.00 0.00 2.74
256 257 3.426695 GCATGTTCTTGCCACATCACTAC 60.427 47.826 0.00 0.00 36.60 2.73
257 258 2.749076 GCATGTTCTTGCCACATCACTA 59.251 45.455 0.00 0.00 36.60 2.74
258 259 1.542915 GCATGTTCTTGCCACATCACT 59.457 47.619 0.00 0.00 36.60 3.41
259 260 1.986698 GCATGTTCTTGCCACATCAC 58.013 50.000 0.00 0.00 36.60 3.06
267 268 1.315257 ATGGACGGGCATGTTCTTGC 61.315 55.000 0.00 2.69 42.01 4.01
268 269 0.734889 GATGGACGGGCATGTTCTTG 59.265 55.000 0.00 0.00 0.00 3.02
269 270 0.744414 CGATGGACGGGCATGTTCTT 60.744 55.000 0.00 0.00 38.46 2.52
270 271 1.153369 CGATGGACGGGCATGTTCT 60.153 57.895 0.00 0.00 38.46 3.01
271 272 2.823829 GCGATGGACGGGCATGTTC 61.824 63.158 0.00 0.00 42.83 3.18
272 273 2.824041 GCGATGGACGGGCATGTT 60.824 61.111 0.00 0.00 42.83 2.71
273 274 3.740128 GAGCGATGGACGGGCATGT 62.740 63.158 0.00 0.00 42.83 3.21
274 275 2.930385 AAGAGCGATGGACGGGCATG 62.930 60.000 0.00 0.00 42.83 4.06
275 276 1.399744 TAAGAGCGATGGACGGGCAT 61.400 55.000 0.00 0.00 42.83 4.40
276 277 2.016393 CTAAGAGCGATGGACGGGCA 62.016 60.000 0.00 0.00 42.83 5.36
277 278 1.300233 CTAAGAGCGATGGACGGGC 60.300 63.158 0.00 0.00 42.83 6.13
278 279 0.312416 CTCTAAGAGCGATGGACGGG 59.688 60.000 0.00 0.00 42.83 5.28
279 280 0.318275 GCTCTAAGAGCGATGGACGG 60.318 60.000 0.00 0.00 45.85 4.79
280 281 3.171705 GCTCTAAGAGCGATGGACG 57.828 57.895 0.00 0.00 45.85 4.79
289 290 9.250624 GTTGTACTATTAACCATGCTCTAAGAG 57.749 37.037 0.00 0.00 0.00 2.85
290 291 8.202137 GGTTGTACTATTAACCATGCTCTAAGA 58.798 37.037 7.73 0.00 44.48 2.10
291 292 8.366671 GGTTGTACTATTAACCATGCTCTAAG 57.633 38.462 7.73 0.00 44.48 2.18
302 303 9.878599 GCAATGACATATGGTTGTACTATTAAC 57.121 33.333 7.80 0.00 0.00 2.01
303 304 9.062524 GGCAATGACATATGGTTGTACTATTAA 57.937 33.333 7.80 0.00 0.00 1.40
304 305 8.214364 TGGCAATGACATATGGTTGTACTATTA 58.786 33.333 7.80 0.00 0.00 0.98
305 306 7.059788 TGGCAATGACATATGGTTGTACTATT 58.940 34.615 7.80 0.00 0.00 1.73
306 307 6.600388 TGGCAATGACATATGGTTGTACTAT 58.400 36.000 7.80 0.00 0.00 2.12
307 308 5.995446 TGGCAATGACATATGGTTGTACTA 58.005 37.500 7.80 0.00 0.00 1.82
308 309 4.854173 TGGCAATGACATATGGTTGTACT 58.146 39.130 7.80 0.00 0.00 2.73
309 310 5.067674 ACATGGCAATGACATATGGTTGTAC 59.932 40.000 8.45 7.39 37.24 2.90
310 311 5.199723 ACATGGCAATGACATATGGTTGTA 58.800 37.500 8.45 4.16 37.24 2.41
311 312 4.025360 ACATGGCAATGACATATGGTTGT 58.975 39.130 8.45 0.00 37.24 3.32
312 313 4.098196 TGACATGGCAATGACATATGGTTG 59.902 41.667 8.45 9.96 34.25 3.77
313 314 4.279982 TGACATGGCAATGACATATGGTT 58.720 39.130 8.45 0.00 34.25 3.67
314 315 3.900971 TGACATGGCAATGACATATGGT 58.099 40.909 8.45 0.00 34.25 3.55
315 316 4.765339 AGATGACATGGCAATGACATATGG 59.235 41.667 17.38 0.00 45.27 2.74
316 317 5.959618 AGATGACATGGCAATGACATATG 57.040 39.130 17.38 0.00 45.27 1.78
317 318 7.498239 GCTATAGATGACATGGCAATGACATAT 59.502 37.037 17.38 16.68 45.27 1.78
318 319 6.820152 GCTATAGATGACATGGCAATGACATA 59.180 38.462 17.38 5.42 45.27 2.29
320 321 4.999311 GCTATAGATGACATGGCAATGACA 59.001 41.667 4.70 8.59 41.56 3.58
321 322 4.394300 GGCTATAGATGACATGGCAATGAC 59.606 45.833 4.70 1.62 37.24 3.06
322 323 4.041938 TGGCTATAGATGACATGGCAATGA 59.958 41.667 4.70 0.00 37.24 2.57
323 324 4.329392 TGGCTATAGATGACATGGCAATG 58.671 43.478 4.70 0.00 39.89 2.82
324 325 4.645863 TGGCTATAGATGACATGGCAAT 57.354 40.909 4.70 0.00 31.98 3.56
325 326 4.436113 TTGGCTATAGATGACATGGCAA 57.564 40.909 4.70 7.38 37.57 4.52
326 327 4.287845 AGATTGGCTATAGATGACATGGCA 59.712 41.667 2.18 2.18 31.98 4.92
327 328 4.841422 AGATTGGCTATAGATGACATGGC 58.159 43.478 3.21 0.00 0.00 4.40
328 329 6.236409 ACAAGATTGGCTATAGATGACATGG 58.764 40.000 3.21 0.00 0.00 3.66
329 330 7.064371 GCTACAAGATTGGCTATAGATGACATG 59.936 40.741 3.21 0.00 0.00 3.21
330 331 7.102346 GCTACAAGATTGGCTATAGATGACAT 58.898 38.462 3.21 0.00 0.00 3.06
331 332 6.459066 GCTACAAGATTGGCTATAGATGACA 58.541 40.000 3.21 0.00 0.00 3.58
332 333 5.872070 GGCTACAAGATTGGCTATAGATGAC 59.128 44.000 3.21 0.00 0.00 3.06
333 334 5.782331 AGGCTACAAGATTGGCTATAGATGA 59.218 40.000 3.21 0.00 37.18 2.92
334 335 6.047511 AGGCTACAAGATTGGCTATAGATG 57.952 41.667 3.21 0.00 37.18 2.90
335 336 6.270927 TGAAGGCTACAAGATTGGCTATAGAT 59.729 38.462 3.21 0.00 37.98 1.98
336 337 5.602561 TGAAGGCTACAAGATTGGCTATAGA 59.397 40.000 3.21 0.00 37.98 1.98
337 338 5.858381 TGAAGGCTACAAGATTGGCTATAG 58.142 41.667 0.00 0.00 37.98 1.31
338 339 5.887214 TGAAGGCTACAAGATTGGCTATA 57.113 39.130 0.00 0.00 37.98 1.31
339 340 4.778213 TGAAGGCTACAAGATTGGCTAT 57.222 40.909 0.00 0.00 37.98 2.97
340 341 4.019321 ACTTGAAGGCTACAAGATTGGCTA 60.019 41.667 18.85 0.00 44.92 3.93
341 342 3.245052 ACTTGAAGGCTACAAGATTGGCT 60.245 43.478 18.85 0.00 44.92 4.75
342 343 3.084786 ACTTGAAGGCTACAAGATTGGC 58.915 45.455 18.85 0.00 44.92 4.52
343 344 5.245531 TGTACTTGAAGGCTACAAGATTGG 58.754 41.667 18.85 1.17 44.92 3.16
344 345 6.204688 TGTTGTACTTGAAGGCTACAAGATTG 59.795 38.462 18.85 0.00 44.92 2.67
345 346 6.296026 TGTTGTACTTGAAGGCTACAAGATT 58.704 36.000 18.85 6.03 44.92 2.40
346 347 5.865085 TGTTGTACTTGAAGGCTACAAGAT 58.135 37.500 18.85 9.76 44.92 2.40
347 348 5.163343 ACTGTTGTACTTGAAGGCTACAAGA 60.163 40.000 18.85 6.90 44.92 3.02
348 349 5.057149 ACTGTTGTACTTGAAGGCTACAAG 58.943 41.667 8.19 13.33 46.69 3.16
349 350 5.031066 ACTGTTGTACTTGAAGGCTACAA 57.969 39.130 4.79 4.79 0.00 2.41
350 351 4.682778 ACTGTTGTACTTGAAGGCTACA 57.317 40.909 0.00 2.14 0.00 2.74
351 352 6.453092 TCTTACTGTTGTACTTGAAGGCTAC 58.547 40.000 0.00 0.00 0.00 3.58
352 353 6.659745 TCTTACTGTTGTACTTGAAGGCTA 57.340 37.500 0.00 0.00 0.00 3.93
353 354 5.546621 TCTTACTGTTGTACTTGAAGGCT 57.453 39.130 0.00 0.00 0.00 4.58
354 355 6.872020 TGTATCTTACTGTTGTACTTGAAGGC 59.128 38.462 0.00 0.00 0.00 4.35
355 356 8.827177 TTGTATCTTACTGTTGTACTTGAAGG 57.173 34.615 0.00 0.00 0.00 3.46
360 361 9.998106 ACATCTTTGTATCTTACTGTTGTACTT 57.002 29.630 0.00 0.00 33.16 2.24
361 362 9.424319 CACATCTTTGTATCTTACTGTTGTACT 57.576 33.333 0.00 0.00 33.76 2.73
362 363 8.169268 GCACATCTTTGTATCTTACTGTTGTAC 58.831 37.037 0.00 0.00 33.76 2.90
363 364 8.094548 AGCACATCTTTGTATCTTACTGTTGTA 58.905 33.333 0.00 0.00 33.76 2.41
364 365 6.936900 AGCACATCTTTGTATCTTACTGTTGT 59.063 34.615 0.00 0.00 33.76 3.32
365 366 7.369803 AGCACATCTTTGTATCTTACTGTTG 57.630 36.000 0.00 0.00 33.76 3.33
366 367 8.314751 AGTAGCACATCTTTGTATCTTACTGTT 58.685 33.333 0.00 0.00 33.76 3.16
367 368 7.841956 AGTAGCACATCTTTGTATCTTACTGT 58.158 34.615 0.00 0.00 33.76 3.55
368 369 8.709386 AAGTAGCACATCTTTGTATCTTACTG 57.291 34.615 0.00 0.00 33.76 2.74
369 370 8.531982 TGAAGTAGCACATCTTTGTATCTTACT 58.468 33.333 0.00 0.00 33.76 2.24
370 371 8.703604 TGAAGTAGCACATCTTTGTATCTTAC 57.296 34.615 0.00 0.00 33.76 2.34
371 372 9.890629 AATGAAGTAGCACATCTTTGTATCTTA 57.109 29.630 0.00 0.00 33.76 2.10
372 373 8.798859 AATGAAGTAGCACATCTTTGTATCTT 57.201 30.769 0.00 0.00 33.76 2.40
373 374 9.890629 TTAATGAAGTAGCACATCTTTGTATCT 57.109 29.630 0.00 0.00 33.76 1.98
377 378 9.448438 TGTATTAATGAAGTAGCACATCTTTGT 57.552 29.630 0.00 0.00 36.15 2.83
380 381 9.060347 CCATGTATTAATGAAGTAGCACATCTT 57.940 33.333 0.00 0.00 0.00 2.40
381 382 7.173907 GCCATGTATTAATGAAGTAGCACATCT 59.826 37.037 0.00 0.00 0.00 2.90
382 383 7.301054 GCCATGTATTAATGAAGTAGCACATC 58.699 38.462 0.00 0.00 0.00 3.06
383 384 6.207417 GGCCATGTATTAATGAAGTAGCACAT 59.793 38.462 0.00 0.00 0.00 3.21
384 385 5.530915 GGCCATGTATTAATGAAGTAGCACA 59.469 40.000 0.00 0.00 0.00 4.57
385 386 5.048713 GGGCCATGTATTAATGAAGTAGCAC 60.049 44.000 4.39 0.00 0.00 4.40
386 387 5.070001 GGGCCATGTATTAATGAAGTAGCA 58.930 41.667 4.39 0.00 0.00 3.49
387 388 5.070001 TGGGCCATGTATTAATGAAGTAGC 58.930 41.667 0.00 0.00 0.00 3.58
388 389 7.170965 AGATGGGCCATGTATTAATGAAGTAG 58.829 38.462 26.77 0.00 0.00 2.57
389 390 7.090319 AGATGGGCCATGTATTAATGAAGTA 57.910 36.000 26.77 0.00 0.00 2.24
390 391 5.957132 AGATGGGCCATGTATTAATGAAGT 58.043 37.500 26.77 0.00 0.00 3.01
391 392 5.416952 GGAGATGGGCCATGTATTAATGAAG 59.583 44.000 26.77 0.00 0.00 3.02
392 393 5.324409 GGAGATGGGCCATGTATTAATGAA 58.676 41.667 26.77 0.00 0.00 2.57
393 394 4.263905 GGGAGATGGGCCATGTATTAATGA 60.264 45.833 26.77 0.00 0.00 2.57
394 395 4.019174 GGGAGATGGGCCATGTATTAATG 58.981 47.826 26.77 0.00 0.00 1.90
395 396 3.662148 TGGGAGATGGGCCATGTATTAAT 59.338 43.478 26.77 0.00 0.00 1.40
396 397 3.059853 TGGGAGATGGGCCATGTATTAA 58.940 45.455 26.77 3.65 0.00 1.40
397 398 2.712384 TGGGAGATGGGCCATGTATTA 58.288 47.619 26.77 6.43 0.00 0.98
398 399 1.533187 TGGGAGATGGGCCATGTATT 58.467 50.000 26.77 6.43 0.00 1.89
399 400 1.764327 ATGGGAGATGGGCCATGTAT 58.236 50.000 26.77 9.68 0.00 2.29
400 401 1.533187 AATGGGAGATGGGCCATGTA 58.467 50.000 26.77 5.24 0.00 2.29
401 402 1.533187 TAATGGGAGATGGGCCATGT 58.467 50.000 26.77 21.91 0.00 3.21
402 403 2.042026 TGATAATGGGAGATGGGCCATG 59.958 50.000 26.77 0.00 0.00 3.66
403 404 2.042162 GTGATAATGGGAGATGGGCCAT 59.958 50.000 21.39 21.39 0.00 4.40
404 405 1.425066 GTGATAATGGGAGATGGGCCA 59.575 52.381 9.61 9.61 0.00 5.36
405 406 1.425066 TGTGATAATGGGAGATGGGCC 59.575 52.381 0.00 0.00 0.00 5.80
406 407 2.957402 TGTGATAATGGGAGATGGGC 57.043 50.000 0.00 0.00 0.00 5.36
407 408 5.494724 CACTATGTGATAATGGGAGATGGG 58.505 45.833 0.00 0.00 35.23 4.00
408 409 4.940046 GCACTATGTGATAATGGGAGATGG 59.060 45.833 1.52 0.00 35.23 3.51
409 410 4.940046 GGCACTATGTGATAATGGGAGATG 59.060 45.833 1.52 0.00 35.23 2.90
410 411 4.848660 AGGCACTATGTGATAATGGGAGAT 59.151 41.667 1.52 0.00 36.02 2.75
411 412 4.234550 AGGCACTATGTGATAATGGGAGA 58.765 43.478 1.52 0.00 36.02 3.71
412 413 4.630644 AGGCACTATGTGATAATGGGAG 57.369 45.455 1.52 0.00 36.02 4.30
413 414 5.402630 TCTAGGCACTATGTGATAATGGGA 58.597 41.667 1.52 0.00 41.70 4.37
414 415 5.745312 TCTAGGCACTATGTGATAATGGG 57.255 43.478 1.52 0.00 41.70 4.00
415 416 5.641209 GCTTCTAGGCACTATGTGATAATGG 59.359 44.000 1.52 0.00 41.70 3.16
416 417 6.226052 TGCTTCTAGGCACTATGTGATAATG 58.774 40.000 1.52 0.00 41.70 1.90
417 418 6.425210 TGCTTCTAGGCACTATGTGATAAT 57.575 37.500 1.52 0.00 41.70 1.28
418 419 5.869649 TGCTTCTAGGCACTATGTGATAA 57.130 39.130 1.52 0.00 41.70 1.75
438 439 1.347817 GAGTCAGCTACAGCACGTGC 61.348 60.000 32.79 32.79 45.16 5.34
439 440 0.242286 AGAGTCAGCTACAGCACGTG 59.758 55.000 12.28 12.28 45.16 4.49
440 441 0.962489 AAGAGTCAGCTACAGCACGT 59.038 50.000 3.70 0.00 45.16 4.49
441 442 2.921634 TAAGAGTCAGCTACAGCACG 57.078 50.000 3.70 0.00 45.16 5.34
442 443 5.004922 AGAATAAGAGTCAGCTACAGCAC 57.995 43.478 3.70 0.00 45.16 4.40
443 444 4.952957 AGAGAATAAGAGTCAGCTACAGCA 59.047 41.667 3.70 0.00 45.16 4.41
444 445 5.514274 AGAGAATAAGAGTCAGCTACAGC 57.486 43.478 0.00 0.00 42.49 4.40
445 446 6.293955 GGCTAGAGAATAAGAGTCAGCTACAG 60.294 46.154 0.00 0.00 0.00 2.74
446 447 5.533154 GGCTAGAGAATAAGAGTCAGCTACA 59.467 44.000 0.00 0.00 0.00 2.74
447 448 5.334569 CGGCTAGAGAATAAGAGTCAGCTAC 60.335 48.000 0.00 0.00 0.00 3.58
448 449 4.757657 CGGCTAGAGAATAAGAGTCAGCTA 59.242 45.833 0.00 0.00 0.00 3.32
449 450 3.568007 CGGCTAGAGAATAAGAGTCAGCT 59.432 47.826 0.00 0.00 0.00 4.24
450 451 3.566322 TCGGCTAGAGAATAAGAGTCAGC 59.434 47.826 0.00 0.00 0.00 4.26
451 452 4.819630 AGTCGGCTAGAGAATAAGAGTCAG 59.180 45.833 0.00 0.00 0.00 3.51
452 453 4.783055 AGTCGGCTAGAGAATAAGAGTCA 58.217 43.478 0.00 0.00 0.00 3.41
453 454 4.214758 GGAGTCGGCTAGAGAATAAGAGTC 59.785 50.000 0.00 0.00 0.00 3.36
454 455 4.139038 GGAGTCGGCTAGAGAATAAGAGT 58.861 47.826 0.00 0.00 0.00 3.24
455 456 4.394729 AGGAGTCGGCTAGAGAATAAGAG 58.605 47.826 0.00 0.00 0.00 2.85
456 457 4.103469 AGAGGAGTCGGCTAGAGAATAAGA 59.897 45.833 0.00 0.00 0.00 2.10
457 458 4.394729 AGAGGAGTCGGCTAGAGAATAAG 58.605 47.826 0.00 0.00 0.00 1.73
458 459 4.440826 AGAGGAGTCGGCTAGAGAATAA 57.559 45.455 0.00 0.00 0.00 1.40
459 460 4.103469 AGAAGAGGAGTCGGCTAGAGAATA 59.897 45.833 0.00 0.00 0.00 1.75
460 461 3.117663 AGAAGAGGAGTCGGCTAGAGAAT 60.118 47.826 0.00 0.00 0.00 2.40
461 462 2.240160 AGAAGAGGAGTCGGCTAGAGAA 59.760 50.000 0.00 0.00 0.00 2.87
462 463 1.841277 AGAAGAGGAGTCGGCTAGAGA 59.159 52.381 0.00 0.00 0.00 3.10
463 464 2.158813 AGAGAAGAGGAGTCGGCTAGAG 60.159 54.545 0.00 0.00 0.00 2.43
464 465 1.841277 AGAGAAGAGGAGTCGGCTAGA 59.159 52.381 0.00 0.00 0.00 2.43
465 466 2.158813 AGAGAGAAGAGGAGTCGGCTAG 60.159 54.545 0.00 0.00 0.00 3.42
466 467 1.841277 AGAGAGAAGAGGAGTCGGCTA 59.159 52.381 0.00 0.00 0.00 3.93
467 468 0.623723 AGAGAGAAGAGGAGTCGGCT 59.376 55.000 0.00 0.00 0.00 5.52
468 469 1.404035 GAAGAGAGAAGAGGAGTCGGC 59.596 57.143 0.00 0.00 0.00 5.54
469 470 2.943033 GAGAAGAGAGAAGAGGAGTCGG 59.057 54.545 0.00 0.00 0.00 4.79
470 471 3.873910 AGAGAAGAGAGAAGAGGAGTCG 58.126 50.000 0.00 0.00 0.00 4.18
471 472 5.501156 AGAAGAGAAGAGAGAAGAGGAGTC 58.499 45.833 0.00 0.00 0.00 3.36
472 473 5.251700 AGAGAAGAGAAGAGAGAAGAGGAGT 59.748 44.000 0.00 0.00 0.00 3.85
473 474 5.749462 AGAGAAGAGAAGAGAGAAGAGGAG 58.251 45.833 0.00 0.00 0.00 3.69
474 475 5.779241 AGAGAAGAGAAGAGAGAAGAGGA 57.221 43.478 0.00 0.00 0.00 3.71
475 476 5.358160 GGAAGAGAAGAGAAGAGAGAAGAGG 59.642 48.000 0.00 0.00 0.00 3.69
476 477 5.358160 GGGAAGAGAAGAGAAGAGAGAAGAG 59.642 48.000 0.00 0.00 0.00 2.85
477 478 5.015178 AGGGAAGAGAAGAGAAGAGAGAAGA 59.985 44.000 0.00 0.00 0.00 2.87
478 479 5.264395 AGGGAAGAGAAGAGAAGAGAGAAG 58.736 45.833 0.00 0.00 0.00 2.85
479 480 5.261216 GAGGGAAGAGAAGAGAAGAGAGAA 58.739 45.833 0.00 0.00 0.00 2.87
480 481 4.325030 GGAGGGAAGAGAAGAGAAGAGAGA 60.325 50.000 0.00 0.00 0.00 3.10
481 482 3.954258 GGAGGGAAGAGAAGAGAAGAGAG 59.046 52.174 0.00 0.00 0.00 3.20
482 483 3.335183 TGGAGGGAAGAGAAGAGAAGAGA 59.665 47.826 0.00 0.00 0.00 3.10
483 484 3.447229 GTGGAGGGAAGAGAAGAGAAGAG 59.553 52.174 0.00 0.00 0.00 2.85
484 485 3.436243 GTGGAGGGAAGAGAAGAGAAGA 58.564 50.000 0.00 0.00 0.00 2.87
485 486 2.165437 CGTGGAGGGAAGAGAAGAGAAG 59.835 54.545 0.00 0.00 0.00 2.85
486 487 2.171840 CGTGGAGGGAAGAGAAGAGAA 58.828 52.381 0.00 0.00 0.00 2.87
487 488 1.075698 ACGTGGAGGGAAGAGAAGAGA 59.924 52.381 0.00 0.00 0.00 3.10
488 489 1.474879 GACGTGGAGGGAAGAGAAGAG 59.525 57.143 0.00 0.00 0.00 2.85
489 490 1.203013 TGACGTGGAGGGAAGAGAAGA 60.203 52.381 0.00 0.00 0.00 2.87
490 491 1.203523 CTGACGTGGAGGGAAGAGAAG 59.796 57.143 0.00 0.00 0.00 2.85
491 492 1.257743 CTGACGTGGAGGGAAGAGAA 58.742 55.000 0.00 0.00 0.00 2.87
492 493 1.251527 GCTGACGTGGAGGGAAGAGA 61.252 60.000 0.00 0.00 0.00 3.10
493 494 1.216710 GCTGACGTGGAGGGAAGAG 59.783 63.158 0.00 0.00 0.00 2.85
494 495 1.533033 TGCTGACGTGGAGGGAAGA 60.533 57.895 0.00 0.00 0.00 2.87
495 496 1.079543 CTGCTGACGTGGAGGGAAG 60.080 63.158 0.00 0.00 0.00 3.46
496 497 1.118965 TTCTGCTGACGTGGAGGGAA 61.119 55.000 0.00 0.00 0.00 3.97
497 498 1.118965 TTTCTGCTGACGTGGAGGGA 61.119 55.000 0.00 0.00 0.00 4.20
498 499 0.250295 TTTTCTGCTGACGTGGAGGG 60.250 55.000 0.00 0.00 0.00 4.30
499 500 1.593196 TTTTTCTGCTGACGTGGAGG 58.407 50.000 0.00 0.00 0.00 4.30
500 501 3.904136 AATTTTTCTGCTGACGTGGAG 57.096 42.857 0.00 0.00 0.00 3.86
501 502 7.624360 AATATAATTTTTCTGCTGACGTGGA 57.376 32.000 0.00 0.00 0.00 4.02
502 503 8.687824 AAAATATAATTTTTCTGCTGACGTGG 57.312 30.769 0.00 0.00 0.00 4.94
518 519 9.813826 AGCAGGCTGTAAGGATTAAAATATAAT 57.186 29.630 17.16 0.00 28.70 1.28
519 520 9.640952 AAGCAGGCTGTAAGGATTAAAATATAA 57.359 29.630 17.16 0.00 28.70 0.98
521 522 9.067986 GTAAGCAGGCTGTAAGGATTAAAATAT 57.932 33.333 17.16 0.00 28.70 1.28
522 523 8.050325 TGTAAGCAGGCTGTAAGGATTAAAATA 58.950 33.333 17.16 0.00 28.70 1.40
523 524 6.889722 TGTAAGCAGGCTGTAAGGATTAAAAT 59.110 34.615 17.16 0.00 28.70 1.82
524 525 6.242396 TGTAAGCAGGCTGTAAGGATTAAAA 58.758 36.000 17.16 0.00 28.70 1.52
525 526 5.811190 TGTAAGCAGGCTGTAAGGATTAAA 58.189 37.500 17.16 0.00 28.70 1.52
526 527 5.429681 TGTAAGCAGGCTGTAAGGATTAA 57.570 39.130 17.16 0.00 28.70 1.40
527 528 5.630415 ATGTAAGCAGGCTGTAAGGATTA 57.370 39.130 17.16 3.77 0.00 1.75
528 529 4.510167 ATGTAAGCAGGCTGTAAGGATT 57.490 40.909 17.16 4.68 0.00 3.01
529 530 5.615289 CTTATGTAAGCAGGCTGTAAGGAT 58.385 41.667 17.16 6.09 0.00 3.24
530 531 5.023533 CTTATGTAAGCAGGCTGTAAGGA 57.976 43.478 17.16 0.00 0.00 3.36
561 562 9.162764 TCGAAAATTTACTAGCTAAGAGCAAAT 57.837 29.630 0.64 0.00 45.56 2.32
562 563 8.542497 TCGAAAATTTACTAGCTAAGAGCAAA 57.458 30.769 0.64 0.00 45.56 3.68
563 564 8.542497 TTCGAAAATTTACTAGCTAAGAGCAA 57.458 30.769 0.00 0.00 45.56 3.91
564 565 8.033038 TCTTCGAAAATTTACTAGCTAAGAGCA 58.967 33.333 0.00 0.00 45.56 4.26
565 566 8.408743 TCTTCGAAAATTTACTAGCTAAGAGC 57.591 34.615 0.00 0.00 42.84 4.09
569 570 8.818057 GCTCATCTTCGAAAATTTACTAGCTAA 58.182 33.333 0.00 0.00 0.00 3.09
570 571 8.198109 AGCTCATCTTCGAAAATTTACTAGCTA 58.802 33.333 0.00 0.00 32.66 3.32
571 572 7.044798 AGCTCATCTTCGAAAATTTACTAGCT 58.955 34.615 0.00 3.35 0.00 3.32
572 573 7.240414 AGCTCATCTTCGAAAATTTACTAGC 57.760 36.000 0.00 1.08 0.00 3.42
573 574 7.221067 ACGAGCTCATCTTCGAAAATTTACTAG 59.779 37.037 15.40 0.00 0.00 2.57
574 575 7.009265 CACGAGCTCATCTTCGAAAATTTACTA 59.991 37.037 15.40 0.00 0.00 1.82
575 576 5.869888 ACGAGCTCATCTTCGAAAATTTACT 59.130 36.000 15.40 0.00 0.00 2.24
576 577 5.954349 CACGAGCTCATCTTCGAAAATTTAC 59.046 40.000 15.40 0.00 0.00 2.01
577 578 5.063438 CCACGAGCTCATCTTCGAAAATTTA 59.937 40.000 15.40 0.00 0.00 1.40
578 579 4.142816 CCACGAGCTCATCTTCGAAAATTT 60.143 41.667 15.40 0.00 0.00 1.82
658 659 2.184322 CCGGATGAGACACCCACG 59.816 66.667 0.00 0.00 0.00 4.94
673 678 0.677731 TAGACGTGTGAGGTACCCCG 60.678 60.000 8.74 6.15 35.12 5.73
674 679 0.813821 GTAGACGTGTGAGGTACCCC 59.186 60.000 8.74 0.00 0.00 4.95
697 919 3.551890 CACGATACGTCATCTTTCCAAGG 59.448 47.826 0.00 0.00 38.32 3.61
698 920 4.421058 TCACGATACGTCATCTTTCCAAG 58.579 43.478 0.00 0.00 38.32 3.61
699 921 4.443913 TCACGATACGTCATCTTTCCAA 57.556 40.909 0.00 0.00 38.32 3.53
700 922 4.142249 ACATCACGATACGTCATCTTTCCA 60.142 41.667 0.00 0.00 38.32 3.53
701 923 4.360563 ACATCACGATACGTCATCTTTCC 58.639 43.478 0.00 0.00 38.32 3.13
703 925 7.040617 ACCTATACATCACGATACGTCATCTTT 60.041 37.037 0.00 0.00 38.32 2.52
704 926 6.430308 ACCTATACATCACGATACGTCATCTT 59.570 38.462 0.00 0.00 38.32 2.40
705 927 5.938710 ACCTATACATCACGATACGTCATCT 59.061 40.000 0.00 0.00 38.32 2.90
707 929 6.016527 ACAACCTATACATCACGATACGTCAT 60.017 38.462 0.00 0.00 38.32 3.06
708 930 5.297527 ACAACCTATACATCACGATACGTCA 59.702 40.000 0.00 0.00 38.32 4.35
709 931 5.755813 ACAACCTATACATCACGATACGTC 58.244 41.667 0.00 0.00 38.32 4.34
710 932 5.762825 ACAACCTATACATCACGATACGT 57.237 39.130 0.00 0.00 42.36 3.57
711 933 7.125536 TCTACAACCTATACATCACGATACG 57.874 40.000 0.00 0.00 0.00 3.06
712 934 8.948145 AGATCTACAACCTATACATCACGATAC 58.052 37.037 0.00 0.00 0.00 2.24
713 935 9.516546 AAGATCTACAACCTATACATCACGATA 57.483 33.333 0.00 0.00 0.00 2.92
714 936 8.300286 CAAGATCTACAACCTATACATCACGAT 58.700 37.037 0.00 0.00 0.00 3.73
715 937 7.255486 CCAAGATCTACAACCTATACATCACGA 60.255 40.741 0.00 0.00 0.00 4.35
716 938 6.863645 CCAAGATCTACAACCTATACATCACG 59.136 42.308 0.00 0.00 0.00 4.35
745 967 3.669824 CGCACTATACACCCGCTATACAG 60.670 52.174 0.00 0.00 0.00 2.74
773 1004 2.222707 CCATATACGCACAACACACACG 60.223 50.000 0.00 0.00 0.00 4.49
1070 1316 2.758327 CACTCCGGGGATCGTCCA 60.758 66.667 9.33 0.00 38.64 4.02
1209 1455 3.430862 GGCACCGCATCGCTGAAA 61.431 61.111 0.00 0.00 0.00 2.69
1511 1796 7.617041 AATTTTTCTCCCGCAGATATATAGC 57.383 36.000 0.00 0.00 0.00 2.97
1514 1799 9.965902 ATCTTAATTTTTCTCCCGCAGATATAT 57.034 29.630 0.00 0.00 0.00 0.86
1515 1800 9.219603 CATCTTAATTTTTCTCCCGCAGATATA 57.780 33.333 0.00 0.00 0.00 0.86
1516 1801 7.939039 TCATCTTAATTTTTCTCCCGCAGATAT 59.061 33.333 0.00 0.00 0.00 1.63
1517 1802 7.279615 TCATCTTAATTTTTCTCCCGCAGATA 58.720 34.615 0.00 0.00 0.00 1.98
1518 1803 6.122277 TCATCTTAATTTTTCTCCCGCAGAT 58.878 36.000 0.00 0.00 0.00 2.90
1519 1804 5.496556 TCATCTTAATTTTTCTCCCGCAGA 58.503 37.500 0.00 0.00 0.00 4.26
1520 1805 5.818136 TCATCTTAATTTTTCTCCCGCAG 57.182 39.130 0.00 0.00 0.00 5.18
1521 1806 6.015856 TGTTTCATCTTAATTTTTCTCCCGCA 60.016 34.615 0.00 0.00 0.00 5.69
1522 1807 6.386654 TGTTTCATCTTAATTTTTCTCCCGC 58.613 36.000 0.00 0.00 0.00 6.13
1523 1808 7.816640 TCTGTTTCATCTTAATTTTTCTCCCG 58.183 34.615 0.00 0.00 0.00 5.14
1618 2427 4.695606 AGTAGGTCACTATTTCCCTCCAA 58.304 43.478 0.00 0.00 34.98 3.53
1627 2436 4.886489 GGGTACGAGAAGTAGGTCACTATT 59.114 45.833 0.00 0.00 36.04 1.73
1705 2514 1.878522 GCTGTATCGCTCCACCACG 60.879 63.158 0.00 0.00 0.00 4.94
1831 2640 0.034337 GCGGGTAGAAGTTGACCACA 59.966 55.000 6.01 0.00 37.47 4.17
2299 3133 3.896133 GCGGCGGTACATCTCGGA 61.896 66.667 9.78 0.00 0.00 4.55
2468 3304 4.256180 GCCCCGCCGGAATGATCT 62.256 66.667 5.05 0.00 0.00 2.75
2483 3319 4.975502 TCAATTGAAATATTGAATCGCGCC 59.024 37.500 5.45 0.00 40.55 6.53
2492 3328 8.489559 CCCACGCATTAATCAATTGAAATATTG 58.510 33.333 13.09 14.61 36.95 1.90
2500 3336 6.041511 TCAAATCCCACGCATTAATCAATTG 58.958 36.000 0.00 0.00 0.00 2.32
2509 3346 2.689983 GGAGAATCAAATCCCACGCATT 59.310 45.455 0.00 0.00 36.25 3.56
2556 3398 1.401552 TGCTACACACGTACGGATACC 59.598 52.381 21.06 2.19 0.00 2.73
2720 3568 1.462283 CTCATGTGCACACGAAAGGAG 59.538 52.381 24.37 16.89 0.00 3.69
2723 3571 2.032054 ACAACTCATGTGCACACGAAAG 59.968 45.455 24.37 18.21 41.93 2.62
2748 3596 2.501650 CGCCGTTCCAAATGCACG 60.502 61.111 0.00 0.00 0.00 5.34
2820 3668 7.094762 CCTTTCTAGAAATAGCAAACCGTCTTT 60.095 37.037 18.02 0.00 0.00 2.52
2875 3724 0.595095 GGCAAAACTGAGCACAGAGG 59.405 55.000 18.54 5.16 46.03 3.69
3016 3867 0.651031 TCTGATCGTCTAGTGCGTCG 59.349 55.000 8.71 0.00 0.00 5.12
3022 3873 1.132643 GCAACGGTCTGATCGTCTAGT 59.867 52.381 17.19 0.00 40.18 2.57
3094 3945 0.033504 CCCGCTTATATCGCACACCT 59.966 55.000 0.00 0.00 0.00 4.00
3115 3966 3.303135 TCACCGCCGCTCTCTGTT 61.303 61.111 0.00 0.00 0.00 3.16
3140 3991 2.676822 TCGCCCGCTCTCTCTGTT 60.677 61.111 0.00 0.00 0.00 3.16
3428 4279 2.094286 CGAAAATGGTGCAATTGCCCTA 60.094 45.455 26.94 14.93 41.18 3.53
3429 4280 1.338011 CGAAAATGGTGCAATTGCCCT 60.338 47.619 26.94 11.63 41.18 5.19
3454 4308 0.251787 ACCCATTGCTCAAAGTCCCC 60.252 55.000 0.00 0.00 0.00 4.81
3514 4369 1.069823 CTTGGCTAGAGCATCGACCAT 59.930 52.381 3.54 0.00 44.36 3.55
3528 4384 4.019501 AGTTCATTCATCAGAGTCTTGGCT 60.020 41.667 0.00 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.