Multiple sequence alignment - TraesCS2D01G493200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G493200 | chr2D | 100.000 | 3005 | 0 | 0 | 1 | 3005 | 590731137 | 590728133 | 0.000000e+00 | 5550.0 |
1 | TraesCS2D01G493200 | chr2D | 94.780 | 364 | 19 | 0 | 2642 | 3005 | 81455847 | 81455484 | 4.350000e-158 | 568.0 |
2 | TraesCS2D01G493200 | chr2D | 88.889 | 207 | 15 | 4 | 2119 | 2319 | 590721868 | 590721664 | 6.430000e-62 | 248.0 |
3 | TraesCS2D01G493200 | chr2B | 91.365 | 1656 | 95 | 23 | 684 | 2312 | 716125890 | 716124256 | 0.000000e+00 | 2222.0 |
4 | TraesCS2D01G493200 | chr2B | 90.047 | 643 | 21 | 16 | 4 | 626 | 716126510 | 716125891 | 0.000000e+00 | 793.0 |
5 | TraesCS2D01G493200 | chr2B | 79.304 | 575 | 95 | 13 | 1017 | 1576 | 716180727 | 716180162 | 6.080000e-102 | 381.0 |
6 | TraesCS2D01G493200 | chr2B | 86.131 | 274 | 20 | 12 | 1591 | 1848 | 716180108 | 716179837 | 2.280000e-71 | 279.0 |
7 | TraesCS2D01G493200 | chr2B | 93.023 | 129 | 5 | 2 | 2447 | 2575 | 716124241 | 716124117 | 5.120000e-43 | 185.0 |
8 | TraesCS2D01G493200 | chr2B | 88.983 | 118 | 13 | 0 | 2438 | 2555 | 716122138 | 716122021 | 2.410000e-31 | 147.0 |
9 | TraesCS2D01G493200 | chr2B | 86.111 | 108 | 15 | 0 | 2319 | 2426 | 687226432 | 687226539 | 1.890000e-22 | 117.0 |
10 | TraesCS2D01G493200 | chr2B | 91.379 | 58 | 5 | 0 | 86 | 143 | 716183185 | 716183128 | 2.480000e-11 | 80.5 |
11 | TraesCS2D01G493200 | chr2A | 91.530 | 1464 | 79 | 22 | 139 | 1581 | 725543493 | 725542054 | 0.000000e+00 | 1975.0 |
12 | TraesCS2D01G493200 | chr2A | 91.257 | 1464 | 83 | 22 | 139 | 1581 | 725662383 | 725660944 | 0.000000e+00 | 1953.0 |
13 | TraesCS2D01G493200 | chr2A | 90.915 | 1464 | 80 | 21 | 139 | 1581 | 725597064 | 725595633 | 0.000000e+00 | 1917.0 |
14 | TraesCS2D01G493200 | chr2A | 84.459 | 740 | 62 | 22 | 1585 | 2313 | 725660908 | 725660211 | 0.000000e+00 | 680.0 |
15 | TraesCS2D01G493200 | chr2A | 84.324 | 740 | 63 | 23 | 1585 | 2313 | 725542018 | 725541321 | 0.000000e+00 | 675.0 |
16 | TraesCS2D01G493200 | chr2A | 84.324 | 740 | 63 | 23 | 1585 | 2313 | 725595597 | 725594900 | 0.000000e+00 | 675.0 |
17 | TraesCS2D01G493200 | chr2A | 82.540 | 189 | 14 | 12 | 1 | 187 | 725545493 | 725545322 | 6.710000e-32 | 148.0 |
18 | TraesCS2D01G493200 | chr2A | 82.540 | 189 | 14 | 12 | 1 | 187 | 725598493 | 725598322 | 6.710000e-32 | 148.0 |
19 | TraesCS2D01G493200 | chr2A | 82.011 | 189 | 15 | 12 | 1 | 187 | 725663877 | 725663706 | 3.120000e-30 | 143.0 |
20 | TraesCS2D01G493200 | chr1D | 94.780 | 364 | 19 | 0 | 2642 | 3005 | 124565299 | 124564936 | 4.350000e-158 | 568.0 |
21 | TraesCS2D01G493200 | chr1D | 94.972 | 358 | 18 | 0 | 2642 | 2999 | 34586755 | 34587112 | 2.020000e-156 | 562.0 |
22 | TraesCS2D01G493200 | chr6D | 94.505 | 364 | 20 | 0 | 2642 | 3005 | 168298315 | 168298678 | 2.020000e-156 | 562.0 |
23 | TraesCS2D01G493200 | chr6D | 93.681 | 364 | 23 | 0 | 2642 | 3005 | 469591830 | 469591467 | 2.040000e-151 | 545.0 |
24 | TraesCS2D01G493200 | chr3A | 94.460 | 361 | 19 | 1 | 2645 | 3005 | 743351117 | 743351476 | 3.380000e-154 | 555.0 |
25 | TraesCS2D01G493200 | chr3A | 88.542 | 96 | 10 | 1 | 2325 | 2420 | 644671511 | 644671605 | 6.810000e-22 | 115.0 |
26 | TraesCS2D01G493200 | chr6B | 93.956 | 364 | 22 | 0 | 2642 | 3005 | 168072241 | 168071878 | 4.380000e-153 | 551.0 |
27 | TraesCS2D01G493200 | chr5D | 93.973 | 365 | 21 | 1 | 2642 | 3005 | 13737725 | 13738089 | 4.380000e-153 | 551.0 |
28 | TraesCS2D01G493200 | chr4D | 93.956 | 364 | 22 | 0 | 2642 | 3005 | 8678032 | 8678395 | 4.380000e-153 | 551.0 |
29 | TraesCS2D01G493200 | chr7D | 85.586 | 111 | 16 | 0 | 2316 | 2426 | 42918328 | 42918438 | 1.890000e-22 | 117.0 |
30 | TraesCS2D01G493200 | chr7B | 83.740 | 123 | 20 | 0 | 2317 | 2439 | 383736128 | 383736250 | 1.890000e-22 | 117.0 |
31 | TraesCS2D01G493200 | chr7B | 87.629 | 97 | 12 | 0 | 2330 | 2426 | 415538755 | 415538851 | 2.450000e-21 | 113.0 |
32 | TraesCS2D01G493200 | chr7A | 85.088 | 114 | 17 | 0 | 2325 | 2438 | 665746111 | 665745998 | 1.890000e-22 | 117.0 |
33 | TraesCS2D01G493200 | chr3D | 86.408 | 103 | 14 | 0 | 2324 | 2426 | 168289823 | 168289721 | 2.450000e-21 | 113.0 |
34 | TraesCS2D01G493200 | chr1A | 87.500 | 96 | 12 | 0 | 2319 | 2414 | 522245713 | 522245808 | 8.810000e-21 | 111.0 |
35 | TraesCS2D01G493200 | chr6A | 82.645 | 121 | 21 | 0 | 2325 | 2445 | 39139728 | 39139608 | 1.140000e-19 | 108.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G493200 | chr2D | 590728133 | 590731137 | 3004 | True | 5550.000000 | 5550 | 100.000000 | 1 | 3005 | 1 | chr2D.!!$R3 | 3004 |
1 | TraesCS2D01G493200 | chr2B | 716122021 | 716126510 | 4489 | True | 836.750000 | 2222 | 90.854500 | 4 | 2575 | 4 | chr2B.!!$R1 | 2571 |
2 | TraesCS2D01G493200 | chr2B | 716179837 | 716183185 | 3348 | True | 246.833333 | 381 | 85.604667 | 86 | 1848 | 3 | chr2B.!!$R2 | 1762 |
3 | TraesCS2D01G493200 | chr2A | 725541321 | 725545493 | 4172 | True | 932.666667 | 1975 | 86.131333 | 1 | 2313 | 3 | chr2A.!!$R1 | 2312 |
4 | TraesCS2D01G493200 | chr2A | 725660211 | 725663877 | 3666 | True | 925.333333 | 1953 | 85.909000 | 1 | 2313 | 3 | chr2A.!!$R3 | 2312 |
5 | TraesCS2D01G493200 | chr2A | 725594900 | 725598493 | 3593 | True | 913.333333 | 1917 | 85.926333 | 1 | 2313 | 3 | chr2A.!!$R2 | 2312 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
79 | 80 | 0.031721 | AATTAGGACCGTCCGCGATC | 59.968 | 55.0 | 8.23 | 0.0 | 42.75 | 3.69 | F |
1723 | 4359 | 0.170339 | GGTGGCGTTAATTCCTGCAC | 59.830 | 55.0 | 0.00 | 0.0 | 0.00 | 4.57 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1872 | 4530 | 0.396435 | CAATGCAGGCGGGGACTATA | 59.604 | 55.0 | 0.0 | 0.0 | 0.0 | 1.31 | R |
2808 | 6483 | 0.035317 | TCTGGCTGCGATGTCTGTTT | 59.965 | 50.0 | 0.0 | 0.0 | 0.0 | 2.83 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
46 | 47 | 3.673484 | GACCGTCCGTCCGTCCAA | 61.673 | 66.667 | 0.00 | 0.00 | 35.23 | 3.53 |
47 | 48 | 3.211564 | GACCGTCCGTCCGTCCAAA | 62.212 | 63.158 | 0.00 | 0.00 | 35.23 | 3.28 |
48 | 49 | 2.029369 | CCGTCCGTCCGTCCAAAA | 59.971 | 61.111 | 0.00 | 0.00 | 0.00 | 2.44 |
49 | 50 | 1.594836 | CCGTCCGTCCGTCCAAAAA | 60.595 | 57.895 | 0.00 | 0.00 | 0.00 | 1.94 |
50 | 51 | 0.952010 | CCGTCCGTCCGTCCAAAAAT | 60.952 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
54 | 55 | 3.125658 | CGTCCGTCCGTCCAAAAATAAAT | 59.874 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
58 | 59 | 7.252708 | GTCCGTCCGTCCAAAAATAAATAAAT | 58.747 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
79 | 80 | 0.031721 | AATTAGGACCGTCCGCGATC | 59.968 | 55.000 | 8.23 | 0.00 | 42.75 | 3.69 |
80 | 81 | 2.126417 | ATTAGGACCGTCCGCGATCG | 62.126 | 60.000 | 11.69 | 11.69 | 42.75 | 3.69 |
187 | 2647 | 1.745232 | GACGGGTGGATATGCACAAA | 58.255 | 50.000 | 26.11 | 0.00 | 0.00 | 2.83 |
190 | 2650 | 1.202132 | CGGGTGGATATGCACAAAACG | 60.202 | 52.381 | 26.11 | 19.65 | 0.00 | 3.60 |
212 | 2672 | 4.314194 | CGCGCGTTTTAAATTTTACGTACA | 59.686 | 37.500 | 24.19 | 0.00 | 36.45 | 2.90 |
213 | 2673 | 5.001451 | CGCGCGTTTTAAATTTTACGTACAT | 59.999 | 36.000 | 24.19 | 0.00 | 36.45 | 2.29 |
241 | 2701 | 1.664151 | CACGCGGATAAGAAAACCTCC | 59.336 | 52.381 | 12.47 | 0.00 | 0.00 | 4.30 |
273 | 2752 | 1.676006 | GCAAGCAACCTGTGTAGTGTT | 59.324 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
348 | 2827 | 0.527565 | GTCGCCGGTAGTTTCCTACA | 59.472 | 55.000 | 1.90 | 0.00 | 44.54 | 2.74 |
403 | 2938 | 1.615919 | CGGGAAGGGTGGTAAGCATTT | 60.616 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
404 | 2939 | 1.824852 | GGGAAGGGTGGTAAGCATTTG | 59.175 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
405 | 2940 | 1.204704 | GGAAGGGTGGTAAGCATTTGC | 59.795 | 52.381 | 0.00 | 0.00 | 42.49 | 3.68 |
406 | 2941 | 1.892474 | GAAGGGTGGTAAGCATTTGCA | 59.108 | 47.619 | 5.20 | 0.00 | 45.16 | 4.08 |
443 | 2978 | 6.128227 | GCCAATACCGTGTACATGTTTTTCTA | 60.128 | 38.462 | 13.91 | 0.00 | 0.00 | 2.10 |
444 | 2979 | 7.238571 | CCAATACCGTGTACATGTTTTTCTAC | 58.761 | 38.462 | 13.91 | 0.00 | 0.00 | 2.59 |
460 | 3014 | 0.899720 | CTACGGGGGCAGTTCACTAA | 59.100 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
730 | 3286 | 4.713553 | AGTTGCTCTATCTGATCTCTCGA | 58.286 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
731 | 3287 | 5.316167 | AGTTGCTCTATCTGATCTCTCGAT | 58.684 | 41.667 | 0.00 | 0.00 | 0.00 | 3.59 |
732 | 3288 | 5.412594 | AGTTGCTCTATCTGATCTCTCGATC | 59.587 | 44.000 | 0.00 | 0.00 | 45.09 | 3.69 |
801 | 3358 | 6.040955 | GTCTCACAATGATCTACCTATCACCA | 59.959 | 42.308 | 0.00 | 0.00 | 38.65 | 4.17 |
812 | 3370 | 6.406370 | TCTACCTATCACCACTGATTTTGTG | 58.594 | 40.000 | 0.00 | 0.00 | 38.21 | 3.33 |
833 | 3391 | 7.994425 | TGTGTGGTTGTATCATTTTATGAGT | 57.006 | 32.000 | 0.00 | 0.00 | 43.53 | 3.41 |
834 | 3392 | 8.402798 | TGTGTGGTTGTATCATTTTATGAGTT | 57.597 | 30.769 | 0.00 | 0.00 | 43.53 | 3.01 |
835 | 3393 | 9.508642 | TGTGTGGTTGTATCATTTTATGAGTTA | 57.491 | 29.630 | 0.00 | 0.00 | 43.53 | 2.24 |
915 | 3473 | 9.481340 | TTCCGTATCTATCTTGAATTCTTGATG | 57.519 | 33.333 | 17.78 | 11.10 | 0.00 | 3.07 |
960 | 3530 | 8.736742 | ACGAAACTAATATTTGTGTACGTATCG | 58.263 | 33.333 | 18.74 | 14.29 | 0.00 | 2.92 |
964 | 3534 | 8.158169 | ACTAATATTTGTGTACGTATCGGAGA | 57.842 | 34.615 | 0.00 | 0.00 | 45.75 | 3.71 |
965 | 3535 | 8.288208 | ACTAATATTTGTGTACGTATCGGAGAG | 58.712 | 37.037 | 0.00 | 0.00 | 43.63 | 3.20 |
966 | 3536 | 4.978083 | ATTTGTGTACGTATCGGAGAGT | 57.022 | 40.909 | 0.00 | 0.00 | 43.63 | 3.24 |
967 | 3537 | 7.734924 | ATATTTGTGTACGTATCGGAGAGTA | 57.265 | 36.000 | 0.00 | 0.00 | 43.63 | 2.59 |
968 | 3538 | 5.475273 | TTTGTGTACGTATCGGAGAGTAG | 57.525 | 43.478 | 0.00 | 0.00 | 43.63 | 2.57 |
969 | 3539 | 4.128925 | TGTGTACGTATCGGAGAGTAGT | 57.871 | 45.455 | 0.00 | 0.00 | 43.63 | 2.73 |
1003 | 3576 | 0.618680 | TGACCCACAGATCTCCCAGG | 60.619 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1004 | 3577 | 0.325671 | GACCCACAGATCTCCCAGGA | 60.326 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1135 | 3708 | 1.228154 | ACGGGCCAGTTCAAGTTCC | 60.228 | 57.895 | 4.39 | 0.00 | 0.00 | 3.62 |
1163 | 3736 | 1.153667 | GCTGCCTCGAGGAAGTCAG | 60.154 | 63.158 | 35.26 | 29.44 | 43.19 | 3.51 |
1190 | 3769 | 3.716006 | CAGGGACACGTGCAAGCG | 61.716 | 66.667 | 17.22 | 0.00 | 37.94 | 4.68 |
1357 | 3942 | 0.670546 | CACCCACTACCACTGCGAAG | 60.671 | 60.000 | 0.00 | 0.00 | 0.00 | 3.79 |
1602 | 4238 | 0.242825 | CCGACAAGGAGACTGCGTTA | 59.757 | 55.000 | 0.00 | 0.00 | 45.00 | 3.18 |
1723 | 4359 | 0.170339 | GGTGGCGTTAATTCCTGCAC | 59.830 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1773 | 4415 | 4.749245 | ATCGTTGAAAAACAGGTAGCTG | 57.251 | 40.909 | 20.16 | 20.16 | 0.00 | 4.24 |
1774 | 4416 | 3.537580 | TCGTTGAAAAACAGGTAGCTGT | 58.462 | 40.909 | 21.62 | 21.62 | 39.56 | 4.40 |
1783 | 4441 | 1.486726 | ACAGGTAGCTGTATCCTTGCC | 59.513 | 52.381 | 25.49 | 0.00 | 35.56 | 4.52 |
1801 | 4459 | 1.942712 | CCATCCTACGCACGTACGC | 60.943 | 63.158 | 16.72 | 0.00 | 36.19 | 4.42 |
1818 | 4476 | 0.449786 | CGCACAACTTGTTGGTGACA | 59.550 | 50.000 | 16.48 | 0.00 | 36.72 | 3.58 |
1943 | 4602 | 7.205992 | TCTCATTTCTCTTCCATGTCGAATAG | 58.794 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
2075 | 4734 | 6.656632 | TCCAGCTATTCAGAATTCTATCGT | 57.343 | 37.500 | 7.86 | 0.00 | 0.00 | 3.73 |
2076 | 4735 | 7.761038 | TCCAGCTATTCAGAATTCTATCGTA | 57.239 | 36.000 | 7.86 | 0.00 | 0.00 | 3.43 |
2077 | 4736 | 8.354711 | TCCAGCTATTCAGAATTCTATCGTAT | 57.645 | 34.615 | 7.86 | 0.00 | 0.00 | 3.06 |
2078 | 4737 | 8.246871 | TCCAGCTATTCAGAATTCTATCGTATG | 58.753 | 37.037 | 7.86 | 2.61 | 0.00 | 2.39 |
2201 | 4869 | 2.066262 | AGTGTTTTAGGATCGTGCACG | 58.934 | 47.619 | 32.76 | 32.76 | 41.45 | 5.34 |
2206 | 4874 | 0.968901 | TTAGGATCGTGCACGGACCT | 60.969 | 55.000 | 37.95 | 37.95 | 43.21 | 3.85 |
2228 | 4896 | 1.375396 | CGTCGCCTCCAACATTCCA | 60.375 | 57.895 | 0.00 | 0.00 | 0.00 | 3.53 |
2237 | 4905 | 4.627741 | GCCTCCAACATTCCATAGGTACAA | 60.628 | 45.833 | 0.00 | 0.00 | 0.00 | 2.41 |
2238 | 4906 | 5.694995 | CCTCCAACATTCCATAGGTACAAT | 58.305 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
2313 | 4982 | 2.949106 | CAGGTGCTGCGTTGGAAG | 59.051 | 61.111 | 0.00 | 0.00 | 0.00 | 3.46 |
2316 | 4985 | 0.674895 | AGGTGCTGCGTTGGAAGATC | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2319 | 4988 | 2.279741 | GTGCTGCGTTGGAAGATCATA | 58.720 | 47.619 | 0.00 | 0.00 | 0.00 | 2.15 |
2320 | 4989 | 2.030946 | GTGCTGCGTTGGAAGATCATAC | 59.969 | 50.000 | 0.00 | 0.00 | 0.00 | 2.39 |
2322 | 4991 | 2.939103 | GCTGCGTTGGAAGATCATACTT | 59.061 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2323 | 4992 | 3.375299 | GCTGCGTTGGAAGATCATACTTT | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
2324 | 4993 | 4.494855 | GCTGCGTTGGAAGATCATACTTTC | 60.495 | 45.833 | 0.00 | 0.00 | 0.00 | 2.62 |
2325 | 4994 | 4.832248 | TGCGTTGGAAGATCATACTTTCT | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
2326 | 4995 | 4.870426 | TGCGTTGGAAGATCATACTTTCTC | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 2.87 |
2327 | 4996 | 5.112686 | GCGTTGGAAGATCATACTTTCTCT | 58.887 | 41.667 | 0.00 | 0.00 | 0.00 | 3.10 |
2328 | 4997 | 5.006165 | GCGTTGGAAGATCATACTTTCTCTG | 59.994 | 44.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2329 | 4998 | 6.102663 | CGTTGGAAGATCATACTTTCTCTGT | 58.897 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2330 | 4999 | 6.254589 | CGTTGGAAGATCATACTTTCTCTGTC | 59.745 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
2331 | 5000 | 6.227298 | TGGAAGATCATACTTTCTCTGTCC | 57.773 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2332 | 5001 | 5.163509 | TGGAAGATCATACTTTCTCTGTCCG | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2333 | 5002 | 5.067936 | GGAAGATCATACTTTCTCTGTCCGA | 59.932 | 44.000 | 0.00 | 0.00 | 0.00 | 4.55 |
2334 | 5003 | 6.405953 | GGAAGATCATACTTTCTCTGTCCGAA | 60.406 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
2335 | 5004 | 6.531503 | AGATCATACTTTCTCTGTCCGAAA | 57.468 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
2336 | 5005 | 6.936279 | AGATCATACTTTCTCTGTCCGAAAA | 58.064 | 36.000 | 0.00 | 0.00 | 30.73 | 2.29 |
2337 | 5006 | 7.386851 | AGATCATACTTTCTCTGTCCGAAAAA | 58.613 | 34.615 | 0.00 | 0.00 | 30.73 | 1.94 |
2356 | 5025 | 4.465632 | AAAACTTGTCCCAAACTTGTCC | 57.534 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
2357 | 5026 | 3.382083 | AACTTGTCCCAAACTTGTCCT | 57.618 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
2358 | 5027 | 3.382083 | ACTTGTCCCAAACTTGTCCTT | 57.618 | 42.857 | 0.00 | 0.00 | 0.00 | 3.36 |
2359 | 5028 | 3.708451 | ACTTGTCCCAAACTTGTCCTTT | 58.292 | 40.909 | 0.00 | 0.00 | 0.00 | 3.11 |
2360 | 5029 | 4.862371 | ACTTGTCCCAAACTTGTCCTTTA | 58.138 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
2361 | 5030 | 5.265989 | ACTTGTCCCAAACTTGTCCTTTAA | 58.734 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
2362 | 5031 | 5.717654 | ACTTGTCCCAAACTTGTCCTTTAAA | 59.282 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2363 | 5032 | 6.382859 | ACTTGTCCCAAACTTGTCCTTTAAAT | 59.617 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
2364 | 5033 | 6.155475 | TGTCCCAAACTTGTCCTTTAAATG | 57.845 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
2365 | 5034 | 5.894393 | TGTCCCAAACTTGTCCTTTAAATGA | 59.106 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2366 | 5035 | 6.381420 | TGTCCCAAACTTGTCCTTTAAATGAA | 59.619 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2367 | 5036 | 7.070571 | TGTCCCAAACTTGTCCTTTAAATGAAT | 59.929 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2368 | 5037 | 7.384932 | GTCCCAAACTTGTCCTTTAAATGAATG | 59.615 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
2369 | 5038 | 7.070571 | TCCCAAACTTGTCCTTTAAATGAATGT | 59.929 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
2370 | 5039 | 8.364142 | CCCAAACTTGTCCTTTAAATGAATGTA | 58.636 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
2371 | 5040 | 9.927668 | CCAAACTTGTCCTTTAAATGAATGTAT | 57.072 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
2379 | 5048 | 9.221775 | GTCCTTTAAATGAATGTATTTAGCACG | 57.778 | 33.333 | 0.00 | 0.00 | 34.87 | 5.34 |
2380 | 5049 | 9.168451 | TCCTTTAAATGAATGTATTTAGCACGA | 57.832 | 29.630 | 0.00 | 0.00 | 34.87 | 4.35 |
2381 | 5050 | 9.781834 | CCTTTAAATGAATGTATTTAGCACGAA | 57.218 | 29.630 | 0.00 | 0.00 | 34.87 | 3.85 |
2386 | 5055 | 9.988350 | AAATGAATGTATTTAGCACGAAGTTAG | 57.012 | 29.630 | 0.00 | 0.00 | 41.61 | 2.34 |
2387 | 5056 | 8.718102 | ATGAATGTATTTAGCACGAAGTTAGT | 57.282 | 30.769 | 0.00 | 0.00 | 41.61 | 2.24 |
2388 | 5057 | 7.959733 | TGAATGTATTTAGCACGAAGTTAGTG | 58.040 | 34.615 | 11.38 | 11.38 | 41.61 | 2.74 |
2400 | 5069 | 7.757097 | CACGAAGTTAGTGCTAAATACATCT | 57.243 | 36.000 | 3.04 | 0.00 | 41.61 | 2.90 |
2401 | 5070 | 8.851960 | CACGAAGTTAGTGCTAAATACATCTA | 57.148 | 34.615 | 3.04 | 0.00 | 41.61 | 1.98 |
2402 | 5071 | 9.464714 | CACGAAGTTAGTGCTAAATACATCTAT | 57.535 | 33.333 | 3.04 | 0.00 | 41.61 | 1.98 |
2411 | 5080 | 9.780186 | AGTGCTAAATACATCTATTTAAGGGAC | 57.220 | 33.333 | 0.00 | 0.00 | 35.36 | 4.46 |
2412 | 5081 | 9.555727 | GTGCTAAATACATCTATTTAAGGGACA | 57.444 | 33.333 | 0.00 | 0.00 | 35.36 | 4.02 |
2421 | 5090 | 8.803235 | ACATCTATTTAAGGGACAAACTTTTCC | 58.197 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
2422 | 5091 | 7.443259 | TCTATTTAAGGGACAAACTTTTCCG | 57.557 | 36.000 | 0.00 | 0.00 | 32.00 | 4.30 |
2423 | 5092 | 4.922471 | TTTAAGGGACAAACTTTTCCGG | 57.078 | 40.909 | 0.00 | 0.00 | 32.00 | 5.14 |
2424 | 5093 | 2.740506 | AAGGGACAAACTTTTCCGGA | 57.259 | 45.000 | 0.00 | 0.00 | 32.00 | 5.14 |
2425 | 5094 | 1.977056 | AGGGACAAACTTTTCCGGAC | 58.023 | 50.000 | 1.83 | 0.00 | 32.00 | 4.79 |
2426 | 5095 | 1.213430 | AGGGACAAACTTTTCCGGACA | 59.787 | 47.619 | 1.83 | 0.00 | 32.00 | 4.02 |
2427 | 5096 | 2.025898 | GGGACAAACTTTTCCGGACAA | 58.974 | 47.619 | 1.83 | 2.22 | 32.00 | 3.18 |
2428 | 5097 | 2.427812 | GGGACAAACTTTTCCGGACAAA | 59.572 | 45.455 | 1.83 | 7.63 | 32.00 | 2.83 |
2429 | 5098 | 3.490249 | GGGACAAACTTTTCCGGACAAAG | 60.490 | 47.826 | 25.01 | 25.01 | 37.29 | 2.77 |
2430 | 5099 | 3.490249 | GGACAAACTTTTCCGGACAAAGG | 60.490 | 47.826 | 27.69 | 16.32 | 35.82 | 3.11 |
2431 | 5100 | 3.358118 | ACAAACTTTTCCGGACAAAGGA | 58.642 | 40.909 | 27.69 | 5.77 | 35.82 | 3.36 |
2432 | 5101 | 3.764972 | ACAAACTTTTCCGGACAAAGGAA | 59.235 | 39.130 | 27.69 | 10.81 | 45.19 | 3.36 |
2443 | 5112 | 8.441312 | TTCCGGACAAAGGAAATACATTATAC | 57.559 | 34.615 | 1.83 | 0.00 | 44.04 | 1.47 |
2444 | 5113 | 7.566569 | TCCGGACAAAGGAAATACATTATACA | 58.433 | 34.615 | 0.00 | 0.00 | 34.33 | 2.29 |
2445 | 5114 | 8.215050 | TCCGGACAAAGGAAATACATTATACAT | 58.785 | 33.333 | 0.00 | 0.00 | 34.33 | 2.29 |
2464 | 5133 | 3.933332 | ACATAAAAGCTTAGTCGTGGCTC | 59.067 | 43.478 | 0.00 | 0.00 | 35.06 | 4.70 |
2480 | 5149 | 1.065551 | GGCTCACTTGCACGTCTTTTT | 59.934 | 47.619 | 0.00 | 0.00 | 34.04 | 1.94 |
2523 | 5192 | 4.225267 | GGGAAGATTAGTCACAGGAGGAAA | 59.775 | 45.833 | 0.00 | 0.00 | 0.00 | 3.13 |
2524 | 5193 | 5.179533 | GGAAGATTAGTCACAGGAGGAAAC | 58.820 | 45.833 | 0.00 | 0.00 | 0.00 | 2.78 |
2546 | 5215 | 6.458232 | ACTACTACTCATGAAAGCTACTGG | 57.542 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2566 | 5235 | 0.822811 | TAGCATAACGTAACCGGCCA | 59.177 | 50.000 | 0.00 | 0.00 | 38.78 | 5.36 |
2567 | 5236 | 0.179468 | AGCATAACGTAACCGGCCAT | 59.821 | 50.000 | 0.00 | 0.00 | 38.78 | 4.40 |
2604 | 5350 | 2.317609 | CCGTCAGGCAACAAGACCG | 61.318 | 63.158 | 0.00 | 0.00 | 39.78 | 4.79 |
2611 | 5357 | 3.342627 | CAACAAGACCGCGGCGAA | 61.343 | 61.111 | 28.58 | 0.00 | 0.00 | 4.70 |
2632 | 5378 | 8.879342 | GCGAAGGCTATCATATGATACTAAAT | 57.121 | 34.615 | 19.44 | 7.04 | 36.05 | 1.40 |
2633 | 5379 | 9.319143 | GCGAAGGCTATCATATGATACTAAATT | 57.681 | 33.333 | 19.44 | 10.94 | 36.05 | 1.82 |
2637 | 5383 | 9.809096 | AGGCTATCATATGATACTAAATTCGTG | 57.191 | 33.333 | 19.44 | 8.59 | 36.05 | 4.35 |
2639 | 5385 | 9.087424 | GCTATCATATGATACTAAATTCGTGCA | 57.913 | 33.333 | 19.44 | 0.00 | 36.05 | 4.57 |
2661 | 6336 | 4.559063 | CCCCGGCCTCTGCATCTG | 62.559 | 72.222 | 0.00 | 0.00 | 40.13 | 2.90 |
2662 | 6337 | 4.559063 | CCCGGCCTCTGCATCTGG | 62.559 | 72.222 | 0.00 | 0.00 | 40.13 | 3.86 |
2663 | 6338 | 4.559063 | CCGGCCTCTGCATCTGGG | 62.559 | 72.222 | 0.00 | 0.00 | 40.13 | 4.45 |
2674 | 6349 | 2.976350 | ATCTGGGCGATGCATGCG | 60.976 | 61.111 | 14.09 | 9.10 | 0.00 | 4.73 |
2680 | 6355 | 2.717485 | GCGATGCATGCGGTCATT | 59.283 | 55.556 | 14.09 | 0.00 | 0.00 | 2.57 |
2685 | 6360 | 3.631144 | CGATGCATGCGGTCATTTTATT | 58.369 | 40.909 | 14.09 | 0.00 | 0.00 | 1.40 |
2686 | 6361 | 4.782156 | CGATGCATGCGGTCATTTTATTA | 58.218 | 39.130 | 14.09 | 0.00 | 0.00 | 0.98 |
2690 | 6365 | 7.536964 | CGATGCATGCGGTCATTTTATTAATTA | 59.463 | 33.333 | 14.09 | 0.00 | 0.00 | 1.40 |
2691 | 6366 | 9.357652 | GATGCATGCGGTCATTTTATTAATTAT | 57.642 | 29.630 | 14.09 | 0.00 | 0.00 | 1.28 |
2692 | 6367 | 9.709495 | ATGCATGCGGTCATTTTATTAATTATT | 57.291 | 25.926 | 14.09 | 0.00 | 0.00 | 1.40 |
2693 | 6368 | 9.190858 | TGCATGCGGTCATTTTATTAATTATTC | 57.809 | 29.630 | 14.09 | 0.00 | 0.00 | 1.75 |
2694 | 6369 | 9.410556 | GCATGCGGTCATTTTATTAATTATTCT | 57.589 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
2722 | 6397 | 9.436957 | ACAAGACCTTATAAAGTCATACAACAG | 57.563 | 33.333 | 15.04 | 0.00 | 0.00 | 3.16 |
2734 | 6409 | 8.535690 | AAGTCATACAACAGTAAGACTAAAGC | 57.464 | 34.615 | 12.21 | 0.00 | 42.62 | 3.51 |
2735 | 6410 | 7.097834 | AGTCATACAACAGTAAGACTAAAGCC | 58.902 | 38.462 | 10.67 | 0.00 | 42.02 | 4.35 |
2737 | 6412 | 7.549488 | GTCATACAACAGTAAGACTAAAGCCAT | 59.451 | 37.037 | 4.35 | 0.00 | 34.99 | 4.40 |
2738 | 6413 | 7.764443 | TCATACAACAGTAAGACTAAAGCCATC | 59.236 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
2739 | 6414 | 4.929808 | ACAACAGTAAGACTAAAGCCATCG | 59.070 | 41.667 | 0.00 | 0.00 | 0.00 | 3.84 |
2740 | 6415 | 4.803098 | ACAGTAAGACTAAAGCCATCGT | 57.197 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
2741 | 6416 | 4.745649 | ACAGTAAGACTAAAGCCATCGTC | 58.254 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
2743 | 6418 | 5.651139 | ACAGTAAGACTAAAGCCATCGTCTA | 59.349 | 40.000 | 0.00 | 0.00 | 35.82 | 2.59 |
2744 | 6419 | 6.152323 | ACAGTAAGACTAAAGCCATCGTCTAA | 59.848 | 38.462 | 0.00 | 0.00 | 35.82 | 2.10 |
2745 | 6420 | 6.693545 | CAGTAAGACTAAAGCCATCGTCTAAG | 59.306 | 42.308 | 0.00 | 0.00 | 35.82 | 2.18 |
2746 | 6421 | 4.048241 | AGACTAAAGCCATCGTCTAAGC | 57.952 | 45.455 | 0.00 | 0.00 | 35.15 | 3.09 |
2747 | 6422 | 3.447586 | AGACTAAAGCCATCGTCTAAGCA | 59.552 | 43.478 | 0.00 | 0.00 | 35.15 | 3.91 |
2748 | 6423 | 4.081642 | AGACTAAAGCCATCGTCTAAGCAA | 60.082 | 41.667 | 0.00 | 0.00 | 35.15 | 3.91 |
2749 | 6424 | 3.933332 | ACTAAAGCCATCGTCTAAGCAAC | 59.067 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
2751 | 6426 | 2.472695 | AGCCATCGTCTAAGCAACAA | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2752 | 6427 | 2.076863 | AGCCATCGTCTAAGCAACAAC | 58.923 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
2753 | 6428 | 2.076863 | GCCATCGTCTAAGCAACAACT | 58.923 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2754 | 6429 | 2.159653 | GCCATCGTCTAAGCAACAACTG | 60.160 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2755 | 6430 | 3.067106 | CCATCGTCTAAGCAACAACTGT | 58.933 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
2757 | 6432 | 2.390938 | TCGTCTAAGCAACAACTGTCG | 58.609 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
2759 | 6434 | 2.135933 | GTCTAAGCAACAACTGTCGCT | 58.864 | 47.619 | 0.00 | 0.00 | 35.90 | 4.93 |
2760 | 6435 | 3.314553 | GTCTAAGCAACAACTGTCGCTA | 58.685 | 45.455 | 0.00 | 0.00 | 33.45 | 4.26 |
2761 | 6436 | 3.121445 | GTCTAAGCAACAACTGTCGCTAC | 59.879 | 47.826 | 0.00 | 0.00 | 33.45 | 3.58 |
2762 | 6437 | 1.948104 | AAGCAACAACTGTCGCTACA | 58.052 | 45.000 | 0.00 | 0.00 | 33.45 | 2.74 |
2763 | 6438 | 1.217882 | AGCAACAACTGTCGCTACAC | 58.782 | 50.000 | 0.00 | 0.00 | 31.60 | 2.90 |
2765 | 6440 | 1.865865 | CAACAACTGTCGCTACACCT | 58.134 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2766 | 6441 | 2.864882 | GCAACAACTGTCGCTACACCTA | 60.865 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2767 | 6442 | 2.719426 | ACAACTGTCGCTACACCTAC | 57.281 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2768 | 6443 | 1.271656 | ACAACTGTCGCTACACCTACC | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
2769 | 6444 | 0.893447 | AACTGTCGCTACACCTACCC | 59.107 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2770 | 6445 | 0.251474 | ACTGTCGCTACACCTACCCA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
2773 | 6448 | 1.903860 | TGTCGCTACACCTACCCAATT | 59.096 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
2774 | 6449 | 2.277084 | GTCGCTACACCTACCCAATTG | 58.723 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
2775 | 6450 | 2.093869 | GTCGCTACACCTACCCAATTGA | 60.094 | 50.000 | 7.12 | 0.00 | 0.00 | 2.57 |
2777 | 6452 | 3.199071 | TCGCTACACCTACCCAATTGATT | 59.801 | 43.478 | 7.12 | 0.00 | 0.00 | 2.57 |
2778 | 6453 | 4.406326 | TCGCTACACCTACCCAATTGATTA | 59.594 | 41.667 | 7.12 | 0.00 | 0.00 | 1.75 |
2779 | 6454 | 5.104859 | TCGCTACACCTACCCAATTGATTAA | 60.105 | 40.000 | 7.12 | 0.00 | 0.00 | 1.40 |
2780 | 6455 | 5.236478 | CGCTACACCTACCCAATTGATTAAG | 59.764 | 44.000 | 7.12 | 0.00 | 0.00 | 1.85 |
2781 | 6456 | 5.531287 | GCTACACCTACCCAATTGATTAAGG | 59.469 | 44.000 | 7.12 | 10.29 | 0.00 | 2.69 |
2782 | 6457 | 4.867086 | ACACCTACCCAATTGATTAAGGG | 58.133 | 43.478 | 7.12 | 0.22 | 46.96 | 3.95 |
2783 | 6458 | 4.215109 | CACCTACCCAATTGATTAAGGGG | 58.785 | 47.826 | 7.12 | 5.55 | 45.83 | 4.79 |
2785 | 6460 | 1.775385 | ACCCAATTGATTAAGGGGCG | 58.225 | 50.000 | 7.12 | 0.00 | 45.83 | 6.13 |
2786 | 6461 | 0.389025 | CCCAATTGATTAAGGGGCGC | 59.611 | 55.000 | 7.12 | 0.00 | 37.66 | 6.53 |
2787 | 6462 | 1.402787 | CCAATTGATTAAGGGGCGCT | 58.597 | 50.000 | 7.64 | 0.00 | 0.00 | 5.92 |
2789 | 6464 | 2.955660 | CCAATTGATTAAGGGGCGCTAA | 59.044 | 45.455 | 7.64 | 0.00 | 0.00 | 3.09 |
2791 | 6466 | 4.764823 | CCAATTGATTAAGGGGCGCTAATA | 59.235 | 41.667 | 7.64 | 0.00 | 0.00 | 0.98 |
2792 | 6467 | 5.106157 | CCAATTGATTAAGGGGCGCTAATAG | 60.106 | 44.000 | 7.64 | 0.00 | 0.00 | 1.73 |
2793 | 6468 | 3.053831 | TGATTAAGGGGCGCTAATAGC | 57.946 | 47.619 | 7.64 | 1.41 | 38.02 | 2.97 |
2800 | 6475 | 2.669910 | GCGCTAATAGCCTGGGCC | 60.670 | 66.667 | 6.69 | 0.00 | 43.17 | 5.80 |
2801 | 6476 | 3.151906 | CGCTAATAGCCTGGGCCT | 58.848 | 61.111 | 4.53 | 0.00 | 43.17 | 5.19 |
2802 | 6477 | 1.827399 | GCGCTAATAGCCTGGGCCTA | 61.827 | 60.000 | 4.53 | 0.00 | 43.17 | 3.93 |
2803 | 6478 | 0.685097 | CGCTAATAGCCTGGGCCTAA | 59.315 | 55.000 | 4.53 | 0.00 | 43.17 | 2.69 |
2804 | 6479 | 1.279271 | CGCTAATAGCCTGGGCCTAAT | 59.721 | 52.381 | 4.53 | 0.00 | 43.17 | 1.73 |
2805 | 6480 | 2.500098 | CGCTAATAGCCTGGGCCTAATA | 59.500 | 50.000 | 4.53 | 0.00 | 43.17 | 0.98 |
2806 | 6481 | 3.679083 | CGCTAATAGCCTGGGCCTAATAC | 60.679 | 52.174 | 4.53 | 0.00 | 43.17 | 1.89 |
2808 | 6483 | 2.433444 | ATAGCCTGGGCCTAATACCA | 57.567 | 50.000 | 4.53 | 0.00 | 43.17 | 3.25 |
2809 | 6484 | 2.199927 | TAGCCTGGGCCTAATACCAA | 57.800 | 50.000 | 4.53 | 0.00 | 43.17 | 3.67 |
2810 | 6485 | 1.304891 | AGCCTGGGCCTAATACCAAA | 58.695 | 50.000 | 4.53 | 0.00 | 43.17 | 3.28 |
2811 | 6486 | 1.063942 | AGCCTGGGCCTAATACCAAAC | 60.064 | 52.381 | 4.53 | 0.00 | 43.17 | 2.93 |
2812 | 6487 | 1.341581 | GCCTGGGCCTAATACCAAACA | 60.342 | 52.381 | 4.53 | 0.00 | 36.09 | 2.83 |
2813 | 6488 | 2.654863 | CCTGGGCCTAATACCAAACAG | 58.345 | 52.381 | 4.53 | 0.00 | 36.09 | 3.16 |
2814 | 6489 | 2.241176 | CCTGGGCCTAATACCAAACAGA | 59.759 | 50.000 | 4.53 | 0.00 | 36.09 | 3.41 |
2815 | 6490 | 3.279434 | CTGGGCCTAATACCAAACAGAC | 58.721 | 50.000 | 4.53 | 0.00 | 36.09 | 3.51 |
2816 | 6491 | 2.645297 | TGGGCCTAATACCAAACAGACA | 59.355 | 45.455 | 4.53 | 0.00 | 32.89 | 3.41 |
2818 | 6493 | 3.883489 | GGGCCTAATACCAAACAGACATC | 59.117 | 47.826 | 0.84 | 0.00 | 0.00 | 3.06 |
2819 | 6494 | 3.560068 | GGCCTAATACCAAACAGACATCG | 59.440 | 47.826 | 0.00 | 0.00 | 0.00 | 3.84 |
2821 | 6496 | 4.188462 | CCTAATACCAAACAGACATCGCA | 58.812 | 43.478 | 0.00 | 0.00 | 0.00 | 5.10 |
2822 | 6497 | 4.271049 | CCTAATACCAAACAGACATCGCAG | 59.729 | 45.833 | 0.00 | 0.00 | 0.00 | 5.18 |
2823 | 6498 | 1.438651 | TACCAAACAGACATCGCAGC | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2824 | 6499 | 1.237285 | ACCAAACAGACATCGCAGCC | 61.237 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2825 | 6500 | 1.236616 | CCAAACAGACATCGCAGCCA | 61.237 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2826 | 6501 | 0.167470 | CAAACAGACATCGCAGCCAG | 59.833 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2827 | 6502 | 0.035317 | AAACAGACATCGCAGCCAGA | 59.965 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2828 | 6503 | 0.671781 | AACAGACATCGCAGCCAGAC | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2829 | 6504 | 1.812922 | CAGACATCGCAGCCAGACC | 60.813 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
2832 | 6507 | 0.175760 | GACATCGCAGCCAGACCTAA | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2833 | 6508 | 0.108138 | ACATCGCAGCCAGACCTAAC | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 2.34 |
2834 | 6509 | 0.108186 | CATCGCAGCCAGACCTAACA | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2836 | 6511 | 0.175760 | TCGCAGCCAGACCTAACATC | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2837 | 6512 | 0.176680 | CGCAGCCAGACCTAACATCT | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2839 | 6514 | 2.159099 | CGCAGCCAGACCTAACATCTAA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2840 | 6515 | 3.462021 | GCAGCCAGACCTAACATCTAAG | 58.538 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
2841 | 6516 | 3.133003 | GCAGCCAGACCTAACATCTAAGA | 59.867 | 47.826 | 0.00 | 0.00 | 0.00 | 2.10 |
2842 | 6517 | 4.688021 | CAGCCAGACCTAACATCTAAGAC | 58.312 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
2843 | 6518 | 4.404073 | CAGCCAGACCTAACATCTAAGACT | 59.596 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
2844 | 6519 | 5.026790 | AGCCAGACCTAACATCTAAGACTT | 58.973 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2845 | 6520 | 5.105146 | AGCCAGACCTAACATCTAAGACTTG | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2846 | 6521 | 5.105310 | GCCAGACCTAACATCTAAGACTTGA | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2847 | 6522 | 6.568869 | CCAGACCTAACATCTAAGACTTGAG | 58.431 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2848 | 6523 | 6.406400 | CCAGACCTAACATCTAAGACTTGAGG | 60.406 | 46.154 | 0.00 | 0.00 | 0.00 | 3.86 |
2849 | 6524 | 6.153680 | CAGACCTAACATCTAAGACTTGAGGT | 59.846 | 42.308 | 0.00 | 0.00 | 37.49 | 3.85 |
2851 | 6526 | 5.422650 | ACCTAACATCTAAGACTTGAGGTCC | 59.577 | 44.000 | 0.00 | 0.00 | 45.54 | 4.46 |
2852 | 6527 | 4.828072 | AACATCTAAGACTTGAGGTCCC | 57.172 | 45.455 | 0.00 | 0.00 | 45.54 | 4.46 |
2853 | 6528 | 3.791320 | ACATCTAAGACTTGAGGTCCCA | 58.209 | 45.455 | 0.00 | 0.00 | 45.54 | 4.37 |
2854 | 6529 | 4.168101 | ACATCTAAGACTTGAGGTCCCAA | 58.832 | 43.478 | 0.00 | 0.00 | 45.54 | 4.12 |
2855 | 6530 | 4.020128 | ACATCTAAGACTTGAGGTCCCAAC | 60.020 | 45.833 | 0.00 | 0.00 | 45.54 | 3.77 |
2856 | 6531 | 2.904434 | TCTAAGACTTGAGGTCCCAACC | 59.096 | 50.000 | 0.00 | 0.00 | 45.54 | 3.77 |
2865 | 6540 | 3.637273 | GTCCCAACCAGGACGCCT | 61.637 | 66.667 | 0.00 | 0.00 | 46.57 | 5.52 |
2905 | 6580 | 4.373116 | TCCGGCGTGCTCCTCAAC | 62.373 | 66.667 | 6.01 | 0.00 | 0.00 | 3.18 |
2908 | 6583 | 2.743928 | GGCGTGCTCCTCAACCAG | 60.744 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2909 | 6584 | 2.743928 | GCGTGCTCCTCAACCAGG | 60.744 | 66.667 | 0.00 | 0.00 | 45.15 | 4.45 |
2923 | 6598 | 3.449227 | CAGGACGCCTGCCGAGTA | 61.449 | 66.667 | 12.01 | 0.00 | 45.13 | 2.59 |
2924 | 6599 | 2.442272 | AGGACGCCTGCCGAGTAT | 60.442 | 61.111 | 0.00 | 0.00 | 41.02 | 2.12 |
2925 | 6600 | 2.279517 | GGACGCCTGCCGAGTATG | 60.280 | 66.667 | 0.00 | 0.00 | 41.02 | 2.39 |
2927 | 6602 | 1.299468 | GACGCCTGCCGAGTATGAG | 60.299 | 63.158 | 0.00 | 0.00 | 41.02 | 2.90 |
2928 | 6603 | 2.028190 | CGCCTGCCGAGTATGAGG | 59.972 | 66.667 | 0.00 | 0.00 | 40.02 | 3.86 |
2934 | 6609 | 4.647615 | CCGAGTATGAGGCCGCCG | 62.648 | 72.222 | 3.22 | 0.00 | 0.00 | 6.46 |
2936 | 6611 | 4.221422 | GAGTATGAGGCCGCCGCA | 62.221 | 66.667 | 18.82 | 18.82 | 37.78 | 5.69 |
2937 | 6612 | 4.227134 | AGTATGAGGCCGCCGCAG | 62.227 | 66.667 | 21.00 | 0.00 | 36.65 | 5.18 |
2957 | 6632 | 0.819582 | CCACTTGGCACCAATCCATC | 59.180 | 55.000 | 1.86 | 0.00 | 35.20 | 3.51 |
2958 | 6633 | 1.617804 | CCACTTGGCACCAATCCATCT | 60.618 | 52.381 | 1.86 | 0.00 | 35.20 | 2.90 |
2959 | 6634 | 2.173519 | CACTTGGCACCAATCCATCTT | 58.826 | 47.619 | 1.86 | 0.00 | 35.20 | 2.40 |
2960 | 6635 | 2.165030 | CACTTGGCACCAATCCATCTTC | 59.835 | 50.000 | 1.86 | 0.00 | 35.20 | 2.87 |
2961 | 6636 | 2.225091 | ACTTGGCACCAATCCATCTTCA | 60.225 | 45.455 | 1.86 | 0.00 | 35.20 | 3.02 |
2962 | 6637 | 2.133281 | TGGCACCAATCCATCTTCAG | 57.867 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2964 | 6639 | 2.295885 | GGCACCAATCCATCTTCAGAG | 58.704 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
2965 | 6640 | 1.674962 | GCACCAATCCATCTTCAGAGC | 59.325 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
2966 | 6641 | 2.683152 | GCACCAATCCATCTTCAGAGCT | 60.683 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2967 | 6642 | 2.943690 | CACCAATCCATCTTCAGAGCTG | 59.056 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2969 | 6644 | 3.776969 | ACCAATCCATCTTCAGAGCTGTA | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
2970 | 6645 | 4.125703 | CCAATCCATCTTCAGAGCTGTAC | 58.874 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
2971 | 6646 | 4.141756 | CCAATCCATCTTCAGAGCTGTACT | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
2972 | 6647 | 4.669206 | ATCCATCTTCAGAGCTGTACTG | 57.331 | 45.455 | 0.00 | 0.00 | 36.80 | 2.74 |
2976 | 6651 | 3.032017 | TCTTCAGAGCTGTACTGTTGC | 57.968 | 47.619 | 0.00 | 0.00 | 36.81 | 4.17 |
2979 | 6654 | 2.964740 | TCAGAGCTGTACTGTTGCATC | 58.035 | 47.619 | 0.00 | 0.00 | 36.81 | 3.91 |
2982 | 6657 | 1.656095 | GAGCTGTACTGTTGCATCGAC | 59.344 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
2983 | 6658 | 0.721718 | GCTGTACTGTTGCATCGACC | 59.278 | 55.000 | 1.46 | 0.00 | 0.00 | 4.79 |
2986 | 6661 | 2.412870 | TGTACTGTTGCATCGACCTTG | 58.587 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
2987 | 6662 | 1.128692 | GTACTGTTGCATCGACCTTGC | 59.871 | 52.381 | 2.50 | 2.50 | 40.55 | 4.01 |
2988 | 6663 | 1.237285 | ACTGTTGCATCGACCTTGCC | 61.237 | 55.000 | 7.01 | 0.00 | 39.39 | 4.52 |
2989 | 6664 | 1.926511 | CTGTTGCATCGACCTTGCCC | 61.927 | 60.000 | 7.01 | 0.00 | 39.39 | 5.36 |
2990 | 6665 | 2.745884 | TTGCATCGACCTTGCCCG | 60.746 | 61.111 | 7.01 | 0.00 | 39.39 | 6.13 |
2991 | 6666 | 4.776322 | TGCATCGACCTTGCCCGG | 62.776 | 66.667 | 7.01 | 0.00 | 39.39 | 5.73 |
2999 | 6674 | 2.187946 | CCTTGCCCGGTCTAGCTG | 59.812 | 66.667 | 0.00 | 0.00 | 0.00 | 4.24 |
3000 | 6675 | 2.512515 | CTTGCCCGGTCTAGCTGC | 60.513 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
3001 | 6676 | 3.003173 | TTGCCCGGTCTAGCTGCT | 61.003 | 61.111 | 7.57 | 7.57 | 0.00 | 4.24 |
3002 | 6677 | 3.315142 | TTGCCCGGTCTAGCTGCTG | 62.315 | 63.158 | 13.43 | 2.51 | 0.00 | 4.41 |
3004 | 6679 | 4.537433 | CCCGGTCTAGCTGCTGCC | 62.537 | 72.222 | 13.43 | 10.67 | 40.80 | 4.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
49 | 50 | 8.724229 | GCGGACGGTCCTAATTTATTTATTTAT | 58.276 | 33.333 | 23.86 | 0.00 | 33.30 | 1.40 |
50 | 51 | 7.095691 | CGCGGACGGTCCTAATTTATTTATTTA | 60.096 | 37.037 | 23.86 | 0.00 | 33.30 | 1.40 |
54 | 55 | 4.050553 | CGCGGACGGTCCTAATTTATTTA | 58.949 | 43.478 | 23.86 | 0.00 | 33.30 | 1.40 |
58 | 59 | 1.102154 | TCGCGGACGGTCCTAATTTA | 58.898 | 50.000 | 23.86 | 2.02 | 40.63 | 1.40 |
79 | 80 | 0.318614 | AAACTTGGCCAAACATCGCG | 60.319 | 50.000 | 20.91 | 8.40 | 0.00 | 5.87 |
80 | 81 | 1.526464 | CAAAACTTGGCCAAACATCGC | 59.474 | 47.619 | 20.91 | 0.00 | 0.00 | 4.58 |
81 | 82 | 2.134346 | CCAAAACTTGGCCAAACATCG | 58.866 | 47.619 | 20.91 | 9.97 | 45.17 | 3.84 |
187 | 2647 | 3.723272 | ACGTAAAATTTAAAACGCGCGTT | 59.277 | 34.783 | 39.88 | 39.88 | 38.87 | 4.84 |
190 | 2650 | 5.706008 | TGTACGTAAAATTTAAAACGCGC | 57.294 | 34.783 | 5.73 | 0.00 | 38.87 | 6.86 |
212 | 2672 | 7.330208 | GGTTTTCTTATCCGCGTGTACATATAT | 59.670 | 37.037 | 4.92 | 0.00 | 0.00 | 0.86 |
213 | 2673 | 6.642131 | GGTTTTCTTATCCGCGTGTACATATA | 59.358 | 38.462 | 4.92 | 0.00 | 0.00 | 0.86 |
241 | 2701 | 0.532573 | TTGCTTGCTAGGTCCTCTCG | 59.467 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
273 | 2752 | 3.438216 | TTTGAGATTGATCCAGGCACA | 57.562 | 42.857 | 0.00 | 0.00 | 0.00 | 4.57 |
315 | 2794 | 0.110464 | GGCGACCGTATAGTCTACGC | 60.110 | 60.000 | 0.00 | 0.00 | 43.00 | 4.42 |
348 | 2827 | 0.321919 | TGCACCTACCGTAGACGACT | 60.322 | 55.000 | 7.16 | 0.00 | 43.02 | 4.18 |
443 | 2978 | 1.125711 | AGTTAGTGAACTGCCCCCGT | 61.126 | 55.000 | 0.00 | 0.00 | 44.50 | 5.28 |
444 | 2979 | 0.899720 | TAGTTAGTGAACTGCCCCCG | 59.100 | 55.000 | 0.59 | 0.00 | 45.74 | 5.73 |
460 | 3014 | 1.101331 | CTAGTCTTTCCGCGGGTAGT | 58.899 | 55.000 | 27.83 | 13.30 | 0.00 | 2.73 |
623 | 3179 | 1.726533 | GAACCGCTAGAGAGGACCCG | 61.727 | 65.000 | 6.29 | 0.00 | 38.45 | 5.28 |
630 | 3186 | 7.002879 | AGGTGTTTATATAGAACCGCTAGAGA | 58.997 | 38.462 | 0.00 | 0.00 | 35.99 | 3.10 |
730 | 3286 | 8.701908 | TGATAGTTAGTTTACCTGATACCGAT | 57.298 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
731 | 3287 | 8.523915 | TTGATAGTTAGTTTACCTGATACCGA | 57.476 | 34.615 | 0.00 | 0.00 | 0.00 | 4.69 |
732 | 3288 | 9.028185 | GTTTGATAGTTAGTTTACCTGATACCG | 57.972 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
792 | 3349 | 4.156556 | CCACACAAAATCAGTGGTGATAGG | 59.843 | 45.833 | 0.00 | 0.28 | 43.04 | 2.57 |
801 | 3358 | 6.899393 | ATGATACAACCACACAAAATCAGT | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
915 | 3473 | 3.066342 | TCGTCTACGAGATTCCACCAATC | 59.934 | 47.826 | 0.14 | 0.00 | 44.22 | 2.67 |
945 | 3515 | 4.978083 | ACTCTCCGATACGTACACAAAT | 57.022 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
951 | 3521 | 5.524284 | TCAGTACTACTCTCCGATACGTAC | 58.476 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
960 | 3530 | 4.153475 | GCTCGATGATCAGTACTACTCTCC | 59.847 | 50.000 | 0.09 | 0.00 | 0.00 | 3.71 |
964 | 3534 | 4.513692 | GTCAGCTCGATGATCAGTACTACT | 59.486 | 45.833 | 0.09 | 0.00 | 0.00 | 2.57 |
965 | 3535 | 4.319911 | GGTCAGCTCGATGATCAGTACTAC | 60.320 | 50.000 | 0.09 | 0.00 | 30.27 | 2.73 |
966 | 3536 | 3.815962 | GGTCAGCTCGATGATCAGTACTA | 59.184 | 47.826 | 0.09 | 0.00 | 30.27 | 1.82 |
967 | 3537 | 2.621055 | GGTCAGCTCGATGATCAGTACT | 59.379 | 50.000 | 0.09 | 0.00 | 30.27 | 2.73 |
968 | 3538 | 2.287909 | GGGTCAGCTCGATGATCAGTAC | 60.288 | 54.545 | 0.09 | 0.00 | 31.55 | 2.73 |
969 | 3539 | 1.957177 | GGGTCAGCTCGATGATCAGTA | 59.043 | 52.381 | 0.09 | 0.00 | 31.55 | 2.74 |
1003 | 3576 | 0.807496 | GTCATGGCTCTGCACCTTTC | 59.193 | 55.000 | 0.00 | 0.00 | 0.00 | 2.62 |
1004 | 3577 | 0.403271 | AGTCATGGCTCTGCACCTTT | 59.597 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
1126 | 3699 | 1.021202 | CCGTTGCACTGGAACTTGAA | 58.979 | 50.000 | 11.20 | 0.00 | 0.00 | 2.69 |
1127 | 3700 | 1.444119 | GCCGTTGCACTGGAACTTGA | 61.444 | 55.000 | 11.20 | 0.00 | 37.47 | 3.02 |
1190 | 3769 | 2.507324 | GGAGGTCGAAGTCGCAGC | 60.507 | 66.667 | 0.00 | 0.00 | 39.60 | 5.25 |
1357 | 3942 | 2.509422 | GAGGTAATGGCCCGTCCC | 59.491 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
1472 | 4057 | 3.302347 | CTGACGCCGCCTCCTTTCT | 62.302 | 63.158 | 0.00 | 0.00 | 0.00 | 2.52 |
1686 | 4322 | 1.203994 | ACCGGATTTCCAGTGAGTACG | 59.796 | 52.381 | 9.46 | 0.00 | 35.14 | 3.67 |
1723 | 4359 | 0.755079 | TTGGAGCCCAGATCGATCAG | 59.245 | 55.000 | 26.47 | 18.71 | 33.81 | 2.90 |
1773 | 4415 | 1.608283 | GCGTAGGATGGGCAAGGATAC | 60.608 | 57.143 | 0.00 | 0.00 | 0.00 | 2.24 |
1774 | 4416 | 0.685097 | GCGTAGGATGGGCAAGGATA | 59.315 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1783 | 4441 | 1.942712 | GCGTACGTGCGTAGGATGG | 60.943 | 63.158 | 26.31 | 0.00 | 39.95 | 3.51 |
1801 | 4459 | 1.202290 | GCCTGTCACCAACAAGTTGTG | 60.202 | 52.381 | 9.79 | 0.07 | 37.45 | 3.33 |
1818 | 4476 | 4.621510 | CGTACATATATCACCATGCAGCCT | 60.622 | 45.833 | 0.00 | 0.00 | 0.00 | 4.58 |
1872 | 4530 | 0.396435 | CAATGCAGGCGGGGACTATA | 59.604 | 55.000 | 0.00 | 0.00 | 0.00 | 1.31 |
1873 | 4531 | 1.149174 | CAATGCAGGCGGGGACTAT | 59.851 | 57.895 | 0.00 | 0.00 | 0.00 | 2.12 |
1874 | 4532 | 2.297895 | ACAATGCAGGCGGGGACTA | 61.298 | 57.895 | 0.00 | 0.00 | 0.00 | 2.59 |
1875 | 4533 | 3.650950 | ACAATGCAGGCGGGGACT | 61.651 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
1943 | 4602 | 9.895894 | CACTTACATATAATAACGTGTTGACAC | 57.104 | 33.333 | 4.20 | 4.20 | 43.15 | 3.67 |
2053 | 4712 | 8.031864 | ACATACGATAGAATTCTGAATAGCTGG | 58.968 | 37.037 | 18.47 | 3.04 | 41.38 | 4.85 |
2112 | 4777 | 9.822185 | GCCCATCAATTATTAGTTTTTCTTGAT | 57.178 | 29.630 | 0.00 | 0.00 | 33.42 | 2.57 |
2113 | 4778 | 8.257306 | GGCCCATCAATTATTAGTTTTTCTTGA | 58.743 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
2123 | 4788 | 5.645497 | GTCTAGCTGGCCCATCAATTATTAG | 59.355 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2159 | 4824 | 2.749621 | GTTGCCCAAGACCTGAATACTG | 59.250 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2201 | 4869 | 4.176851 | GAGGCGACGACGAGGTCC | 62.177 | 72.222 | 12.29 | 2.32 | 42.66 | 4.46 |
2206 | 4874 | 2.149803 | AATGTTGGAGGCGACGACGA | 62.150 | 55.000 | 12.29 | 0.00 | 42.66 | 4.20 |
2220 | 4888 | 9.920946 | AACTAATGATTGTACCTATGGAATGTT | 57.079 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
2237 | 4905 | 8.150945 | ACACGCTATTCCTGATTAACTAATGAT | 58.849 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
2238 | 4906 | 7.497595 | ACACGCTATTCCTGATTAACTAATGA | 58.502 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2313 | 4982 | 7.596749 | TTTTTCGGACAGAGAAAGTATGATC | 57.403 | 36.000 | 0.00 | 0.00 | 38.61 | 2.92 |
2341 | 5010 | 5.894393 | TCATTTAAAGGACAAGTTTGGGACA | 59.106 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2342 | 5011 | 6.399639 | TCATTTAAAGGACAAGTTTGGGAC | 57.600 | 37.500 | 0.00 | 0.00 | 0.00 | 4.46 |
2343 | 5012 | 7.070571 | ACATTCATTTAAAGGACAAGTTTGGGA | 59.929 | 33.333 | 1.27 | 0.00 | 0.00 | 4.37 |
2344 | 5013 | 7.216494 | ACATTCATTTAAAGGACAAGTTTGGG | 58.784 | 34.615 | 1.27 | 0.00 | 0.00 | 4.12 |
2345 | 5014 | 9.927668 | ATACATTCATTTAAAGGACAAGTTTGG | 57.072 | 29.630 | 1.27 | 0.00 | 0.00 | 3.28 |
2353 | 5022 | 9.221775 | CGTGCTAAATACATTCATTTAAAGGAC | 57.778 | 33.333 | 1.27 | 0.00 | 31.67 | 3.85 |
2354 | 5023 | 9.168451 | TCGTGCTAAATACATTCATTTAAAGGA | 57.832 | 29.630 | 0.00 | 0.00 | 31.67 | 3.36 |
2355 | 5024 | 9.781834 | TTCGTGCTAAATACATTCATTTAAAGG | 57.218 | 29.630 | 0.00 | 0.00 | 31.67 | 3.11 |
2360 | 5029 | 9.988350 | CTAACTTCGTGCTAAATACATTCATTT | 57.012 | 29.630 | 0.00 | 0.00 | 32.91 | 2.32 |
2361 | 5030 | 9.162764 | ACTAACTTCGTGCTAAATACATTCATT | 57.837 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2362 | 5031 | 8.604035 | CACTAACTTCGTGCTAAATACATTCAT | 58.396 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2363 | 5032 | 7.959733 | CACTAACTTCGTGCTAAATACATTCA | 58.040 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2376 | 5045 | 7.757097 | AGATGTATTTAGCACTAACTTCGTG | 57.243 | 36.000 | 0.00 | 0.00 | 35.53 | 4.35 |
2385 | 5054 | 9.780186 | GTCCCTTAAATAGATGTATTTAGCACT | 57.220 | 33.333 | 13.10 | 0.00 | 40.57 | 4.40 |
2386 | 5055 | 9.555727 | TGTCCCTTAAATAGATGTATTTAGCAC | 57.444 | 33.333 | 13.10 | 9.84 | 40.57 | 4.40 |
2395 | 5064 | 8.803235 | GGAAAAGTTTGTCCCTTAAATAGATGT | 58.197 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
2396 | 5065 | 7.968405 | CGGAAAAGTTTGTCCCTTAAATAGATG | 59.032 | 37.037 | 9.74 | 0.00 | 0.00 | 2.90 |
2397 | 5066 | 7.122204 | CCGGAAAAGTTTGTCCCTTAAATAGAT | 59.878 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
2398 | 5067 | 6.431852 | CCGGAAAAGTTTGTCCCTTAAATAGA | 59.568 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
2399 | 5068 | 6.431852 | TCCGGAAAAGTTTGTCCCTTAAATAG | 59.568 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
2400 | 5069 | 6.207221 | GTCCGGAAAAGTTTGTCCCTTAAATA | 59.793 | 38.462 | 5.23 | 0.00 | 0.00 | 1.40 |
2401 | 5070 | 5.010314 | GTCCGGAAAAGTTTGTCCCTTAAAT | 59.990 | 40.000 | 5.23 | 0.00 | 0.00 | 1.40 |
2402 | 5071 | 4.338964 | GTCCGGAAAAGTTTGTCCCTTAAA | 59.661 | 41.667 | 5.23 | 0.00 | 0.00 | 1.52 |
2403 | 5072 | 3.884693 | GTCCGGAAAAGTTTGTCCCTTAA | 59.115 | 43.478 | 5.23 | 0.00 | 0.00 | 1.85 |
2404 | 5073 | 3.117963 | TGTCCGGAAAAGTTTGTCCCTTA | 60.118 | 43.478 | 5.23 | 0.00 | 0.00 | 2.69 |
2405 | 5074 | 2.304092 | GTCCGGAAAAGTTTGTCCCTT | 58.696 | 47.619 | 5.23 | 0.00 | 0.00 | 3.95 |
2406 | 5075 | 1.213430 | TGTCCGGAAAAGTTTGTCCCT | 59.787 | 47.619 | 5.23 | 0.00 | 0.00 | 4.20 |
2407 | 5076 | 1.682740 | TGTCCGGAAAAGTTTGTCCC | 58.317 | 50.000 | 5.23 | 0.00 | 0.00 | 4.46 |
2408 | 5077 | 3.490249 | CCTTTGTCCGGAAAAGTTTGTCC | 60.490 | 47.826 | 24.70 | 6.45 | 33.61 | 4.02 |
2409 | 5078 | 3.379057 | TCCTTTGTCCGGAAAAGTTTGTC | 59.621 | 43.478 | 24.70 | 7.04 | 33.61 | 3.18 |
2410 | 5079 | 3.358118 | TCCTTTGTCCGGAAAAGTTTGT | 58.642 | 40.909 | 24.70 | 0.00 | 33.61 | 2.83 |
2411 | 5080 | 4.379339 | TTCCTTTGTCCGGAAAAGTTTG | 57.621 | 40.909 | 24.70 | 16.01 | 37.59 | 2.93 |
2418 | 5087 | 8.047911 | TGTATAATGTATTTCCTTTGTCCGGAA | 58.952 | 33.333 | 5.23 | 0.00 | 38.71 | 4.30 |
2419 | 5088 | 7.566569 | TGTATAATGTATTTCCTTTGTCCGGA | 58.433 | 34.615 | 0.00 | 0.00 | 0.00 | 5.14 |
2420 | 5089 | 7.795482 | TGTATAATGTATTTCCTTTGTCCGG | 57.205 | 36.000 | 0.00 | 0.00 | 0.00 | 5.14 |
2435 | 5104 | 9.042008 | CCACGACTAAGCTTTTATGTATAATGT | 57.958 | 33.333 | 3.20 | 0.00 | 0.00 | 2.71 |
2436 | 5105 | 8.009974 | GCCACGACTAAGCTTTTATGTATAATG | 58.990 | 37.037 | 3.20 | 0.00 | 0.00 | 1.90 |
2437 | 5106 | 7.931948 | AGCCACGACTAAGCTTTTATGTATAAT | 59.068 | 33.333 | 3.20 | 0.00 | 31.27 | 1.28 |
2438 | 5107 | 7.270047 | AGCCACGACTAAGCTTTTATGTATAA | 58.730 | 34.615 | 3.20 | 0.00 | 31.27 | 0.98 |
2439 | 5108 | 6.812998 | AGCCACGACTAAGCTTTTATGTATA | 58.187 | 36.000 | 3.20 | 0.00 | 31.27 | 1.47 |
2440 | 5109 | 5.671493 | AGCCACGACTAAGCTTTTATGTAT | 58.329 | 37.500 | 3.20 | 0.00 | 31.27 | 2.29 |
2441 | 5110 | 5.080969 | AGCCACGACTAAGCTTTTATGTA | 57.919 | 39.130 | 3.20 | 0.00 | 31.27 | 2.29 |
2442 | 5111 | 3.933332 | GAGCCACGACTAAGCTTTTATGT | 59.067 | 43.478 | 3.20 | 0.00 | 36.87 | 2.29 |
2443 | 5112 | 3.932710 | TGAGCCACGACTAAGCTTTTATG | 59.067 | 43.478 | 3.20 | 0.00 | 36.87 | 1.90 |
2444 | 5113 | 3.933332 | GTGAGCCACGACTAAGCTTTTAT | 59.067 | 43.478 | 3.20 | 0.00 | 36.87 | 1.40 |
2445 | 5114 | 3.006537 | AGTGAGCCACGACTAAGCTTTTA | 59.993 | 43.478 | 3.20 | 0.00 | 39.64 | 1.52 |
2464 | 5133 | 3.108144 | CAAGGAAAAAGACGTGCAAGTG | 58.892 | 45.455 | 10.87 | 0.00 | 0.00 | 3.16 |
2480 | 5149 | 3.087031 | CCGTACTAGGTTCAGACAAGGA | 58.913 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2523 | 5192 | 5.952947 | ACCAGTAGCTTTCATGAGTAGTAGT | 59.047 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2524 | 5193 | 6.458232 | ACCAGTAGCTTTCATGAGTAGTAG | 57.542 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2525 | 5194 | 7.569639 | CTACCAGTAGCTTTCATGAGTAGTA | 57.430 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2546 | 5215 | 1.211743 | GGCCGGTTACGTTATGCTAC | 58.788 | 55.000 | 1.90 | 0.00 | 38.78 | 3.58 |
2604 | 5350 | 1.002366 | CATATGATAGCCTTCGCCGC | 58.998 | 55.000 | 0.00 | 0.00 | 34.57 | 6.53 |
2611 | 5357 | 9.809096 | CACGAATTTAGTATCATATGATAGCCT | 57.191 | 33.333 | 22.97 | 19.07 | 37.67 | 4.58 |
2613 | 5359 | 9.087424 | TGCACGAATTTAGTATCATATGATAGC | 57.913 | 33.333 | 22.97 | 18.10 | 37.67 | 2.97 |
2617 | 5363 | 8.978539 | GTCTTGCACGAATTTAGTATCATATGA | 58.021 | 33.333 | 8.10 | 8.10 | 0.00 | 2.15 |
2618 | 5364 | 8.223769 | GGTCTTGCACGAATTTAGTATCATATG | 58.776 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
2619 | 5365 | 7.387948 | GGGTCTTGCACGAATTTAGTATCATAT | 59.612 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
2620 | 5366 | 6.704493 | GGGTCTTGCACGAATTTAGTATCATA | 59.296 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
2622 | 5368 | 4.873827 | GGGTCTTGCACGAATTTAGTATCA | 59.126 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
2624 | 5370 | 4.196971 | GGGGTCTTGCACGAATTTAGTAT | 58.803 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
2626 | 5372 | 2.433436 | GGGGTCTTGCACGAATTTAGT | 58.567 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
2627 | 5373 | 1.743394 | GGGGGTCTTGCACGAATTTAG | 59.257 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
2628 | 5374 | 1.828979 | GGGGGTCTTGCACGAATTTA | 58.171 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2629 | 5375 | 1.241315 | CGGGGGTCTTGCACGAATTT | 61.241 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2632 | 5378 | 4.323477 | CCGGGGGTCTTGCACGAA | 62.323 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
2650 | 6325 | 2.827423 | ATCGCCCAGATGCAGAGG | 59.173 | 61.111 | 0.00 | 0.00 | 38.36 | 3.69 |
2662 | 6337 | 2.340453 | AAATGACCGCATGCATCGCC | 62.340 | 55.000 | 19.57 | 2.12 | 34.26 | 5.54 |
2663 | 6338 | 0.526096 | AAAATGACCGCATGCATCGC | 60.526 | 50.000 | 19.57 | 3.47 | 34.26 | 4.58 |
2664 | 6339 | 2.753989 | TAAAATGACCGCATGCATCG | 57.246 | 45.000 | 19.57 | 6.69 | 34.26 | 3.84 |
2697 | 6372 | 9.436957 | ACTGTTGTATGACTTTATAAGGTCTTG | 57.563 | 33.333 | 23.46 | 10.41 | 34.01 | 3.02 |
2711 | 6386 | 6.872020 | TGGCTTTAGTCTTACTGTTGTATGAC | 59.128 | 38.462 | 11.70 | 11.70 | 45.97 | 3.06 |
2713 | 6388 | 7.254117 | CGATGGCTTTAGTCTTACTGTTGTATG | 60.254 | 40.741 | 0.00 | 0.00 | 0.00 | 2.39 |
2714 | 6389 | 6.757010 | CGATGGCTTTAGTCTTACTGTTGTAT | 59.243 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2716 | 6391 | 4.929808 | CGATGGCTTTAGTCTTACTGTTGT | 59.070 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
2717 | 6392 | 4.929808 | ACGATGGCTTTAGTCTTACTGTTG | 59.070 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
2718 | 6393 | 5.047235 | AGACGATGGCTTTAGTCTTACTGTT | 60.047 | 40.000 | 0.00 | 0.00 | 40.64 | 3.16 |
2719 | 6394 | 4.463186 | AGACGATGGCTTTAGTCTTACTGT | 59.537 | 41.667 | 0.00 | 0.00 | 40.64 | 3.55 |
2722 | 6397 | 5.459434 | GCTTAGACGATGGCTTTAGTCTTAC | 59.541 | 44.000 | 14.28 | 5.13 | 42.99 | 2.34 |
2725 | 6400 | 3.447586 | TGCTTAGACGATGGCTTTAGTCT | 59.552 | 43.478 | 13.79 | 13.79 | 44.90 | 3.24 |
2727 | 6402 | 3.887621 | TGCTTAGACGATGGCTTTAGT | 57.112 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
2729 | 6404 | 3.932822 | TGTTGCTTAGACGATGGCTTTA | 58.067 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
2730 | 6405 | 2.778299 | TGTTGCTTAGACGATGGCTTT | 58.222 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
2731 | 6406 | 2.472695 | TGTTGCTTAGACGATGGCTT | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2732 | 6407 | 2.076863 | GTTGTTGCTTAGACGATGGCT | 58.923 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
2733 | 6408 | 2.076863 | AGTTGTTGCTTAGACGATGGC | 58.923 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2734 | 6409 | 3.067106 | ACAGTTGTTGCTTAGACGATGG | 58.933 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2735 | 6410 | 3.181540 | CGACAGTTGTTGCTTAGACGATG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 3.84 |
2737 | 6412 | 2.390938 | CGACAGTTGTTGCTTAGACGA | 58.609 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
2738 | 6413 | 2.837337 | CGACAGTTGTTGCTTAGACG | 57.163 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2746 | 6421 | 1.865865 | AGGTGTAGCGACAGTTGTTG | 58.134 | 50.000 | 0.00 | 0.00 | 35.82 | 3.33 |
2747 | 6422 | 2.288640 | GGTAGGTGTAGCGACAGTTGTT | 60.289 | 50.000 | 0.00 | 0.00 | 35.82 | 2.83 |
2748 | 6423 | 1.271656 | GGTAGGTGTAGCGACAGTTGT | 59.728 | 52.381 | 0.00 | 0.00 | 35.82 | 3.32 |
2749 | 6424 | 1.403780 | GGGTAGGTGTAGCGACAGTTG | 60.404 | 57.143 | 0.00 | 0.00 | 35.82 | 3.16 |
2751 | 6426 | 0.251474 | TGGGTAGGTGTAGCGACAGT | 60.251 | 55.000 | 0.00 | 0.00 | 35.82 | 3.55 |
2752 | 6427 | 0.892755 | TTGGGTAGGTGTAGCGACAG | 59.107 | 55.000 | 0.00 | 0.00 | 35.82 | 3.51 |
2753 | 6428 | 1.563924 | ATTGGGTAGGTGTAGCGACA | 58.436 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2754 | 6429 | 2.093869 | TCAATTGGGTAGGTGTAGCGAC | 60.094 | 50.000 | 5.42 | 0.00 | 0.00 | 5.19 |
2755 | 6430 | 2.181125 | TCAATTGGGTAGGTGTAGCGA | 58.819 | 47.619 | 5.42 | 0.00 | 0.00 | 4.93 |
2757 | 6432 | 5.531287 | CCTTAATCAATTGGGTAGGTGTAGC | 59.469 | 44.000 | 5.42 | 0.00 | 0.00 | 3.58 |
2759 | 6434 | 5.103855 | CCCCTTAATCAATTGGGTAGGTGTA | 60.104 | 44.000 | 5.42 | 0.00 | 38.03 | 2.90 |
2760 | 6435 | 4.325816 | CCCCTTAATCAATTGGGTAGGTGT | 60.326 | 45.833 | 5.42 | 0.00 | 38.03 | 4.16 |
2761 | 6436 | 4.215109 | CCCCTTAATCAATTGGGTAGGTG | 58.785 | 47.826 | 5.42 | 0.00 | 38.03 | 4.00 |
2762 | 6437 | 3.373767 | GCCCCTTAATCAATTGGGTAGGT | 60.374 | 47.826 | 5.42 | 0.00 | 38.57 | 3.08 |
2763 | 6438 | 3.230976 | GCCCCTTAATCAATTGGGTAGG | 58.769 | 50.000 | 5.42 | 7.57 | 38.57 | 3.18 |
2765 | 6440 | 2.938838 | CGCCCCTTAATCAATTGGGTA | 58.061 | 47.619 | 5.42 | 0.00 | 38.57 | 3.69 |
2766 | 6441 | 1.775385 | CGCCCCTTAATCAATTGGGT | 58.225 | 50.000 | 5.42 | 0.00 | 38.57 | 4.51 |
2767 | 6442 | 0.389025 | GCGCCCCTTAATCAATTGGG | 59.611 | 55.000 | 5.42 | 0.00 | 39.37 | 4.12 |
2768 | 6443 | 1.402787 | AGCGCCCCTTAATCAATTGG | 58.597 | 50.000 | 2.29 | 0.00 | 0.00 | 3.16 |
2769 | 6444 | 4.853924 | ATTAGCGCCCCTTAATCAATTG | 57.146 | 40.909 | 2.29 | 0.00 | 0.00 | 2.32 |
2770 | 6445 | 4.459337 | GCTATTAGCGCCCCTTAATCAATT | 59.541 | 41.667 | 2.29 | 0.00 | 0.00 | 2.32 |
2773 | 6448 | 2.290071 | GGCTATTAGCGCCCCTTAATCA | 60.290 | 50.000 | 2.29 | 0.00 | 43.62 | 2.57 |
2774 | 6449 | 2.357075 | GGCTATTAGCGCCCCTTAATC | 58.643 | 52.381 | 2.29 | 0.00 | 43.62 | 1.75 |
2775 | 6450 | 2.491675 | GGCTATTAGCGCCCCTTAAT | 57.508 | 50.000 | 2.29 | 4.16 | 43.62 | 1.40 |
2782 | 6457 | 2.669910 | GCCCAGGCTATTAGCGCC | 60.670 | 66.667 | 2.29 | 0.00 | 43.62 | 6.53 |
2783 | 6458 | 1.827399 | TAGGCCCAGGCTATTAGCGC | 61.827 | 60.000 | 8.89 | 0.00 | 43.62 | 5.92 |
2785 | 6460 | 3.370633 | GGTATTAGGCCCAGGCTATTAGC | 60.371 | 52.174 | 8.89 | 7.16 | 40.30 | 3.09 |
2786 | 6461 | 3.844211 | TGGTATTAGGCCCAGGCTATTAG | 59.156 | 47.826 | 8.89 | 0.00 | 40.30 | 1.73 |
2787 | 6462 | 3.876828 | TGGTATTAGGCCCAGGCTATTA | 58.123 | 45.455 | 8.89 | 1.40 | 40.30 | 0.98 |
2789 | 6464 | 2.433444 | TGGTATTAGGCCCAGGCTAT | 57.567 | 50.000 | 8.89 | 0.32 | 40.30 | 2.97 |
2791 | 6466 | 1.063942 | GTTTGGTATTAGGCCCAGGCT | 60.064 | 52.381 | 8.89 | 0.35 | 42.39 | 4.58 |
2792 | 6467 | 1.341581 | TGTTTGGTATTAGGCCCAGGC | 60.342 | 52.381 | 0.00 | 0.00 | 41.06 | 4.85 |
2793 | 6468 | 2.241176 | TCTGTTTGGTATTAGGCCCAGG | 59.759 | 50.000 | 0.00 | 0.00 | 31.04 | 4.45 |
2795 | 6470 | 2.645297 | TGTCTGTTTGGTATTAGGCCCA | 59.355 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
2796 | 6471 | 3.359695 | TGTCTGTTTGGTATTAGGCCC | 57.640 | 47.619 | 0.00 | 0.00 | 0.00 | 5.80 |
2797 | 6472 | 3.560068 | CGATGTCTGTTTGGTATTAGGCC | 59.440 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
2799 | 6474 | 4.188462 | TGCGATGTCTGTTTGGTATTAGG | 58.812 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
2800 | 6475 | 4.260375 | GCTGCGATGTCTGTTTGGTATTAG | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
2801 | 6476 | 3.621268 | GCTGCGATGTCTGTTTGGTATTA | 59.379 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
2802 | 6477 | 2.420022 | GCTGCGATGTCTGTTTGGTATT | 59.580 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
2803 | 6478 | 2.009774 | GCTGCGATGTCTGTTTGGTAT | 58.990 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
2804 | 6479 | 1.438651 | GCTGCGATGTCTGTTTGGTA | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
2805 | 6480 | 1.237285 | GGCTGCGATGTCTGTTTGGT | 61.237 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2806 | 6481 | 1.236616 | TGGCTGCGATGTCTGTTTGG | 61.237 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2808 | 6483 | 0.035317 | TCTGGCTGCGATGTCTGTTT | 59.965 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2809 | 6484 | 0.671781 | GTCTGGCTGCGATGTCTGTT | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2810 | 6485 | 1.079543 | GTCTGGCTGCGATGTCTGT | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
2811 | 6486 | 1.812922 | GGTCTGGCTGCGATGTCTG | 60.813 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
2812 | 6487 | 0.684479 | TAGGTCTGGCTGCGATGTCT | 60.684 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2813 | 6488 | 0.175760 | TTAGGTCTGGCTGCGATGTC | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2814 | 6489 | 0.108138 | GTTAGGTCTGGCTGCGATGT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2815 | 6490 | 0.108186 | TGTTAGGTCTGGCTGCGATG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
2816 | 6491 | 0.833287 | ATGTTAGGTCTGGCTGCGAT | 59.167 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
2818 | 6493 | 0.176680 | AGATGTTAGGTCTGGCTGCG | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2819 | 6494 | 3.133003 | TCTTAGATGTTAGGTCTGGCTGC | 59.867 | 47.826 | 0.00 | 0.00 | 0.00 | 5.25 |
2821 | 6496 | 4.615513 | AGTCTTAGATGTTAGGTCTGGCT | 58.384 | 43.478 | 0.00 | 0.00 | 0.00 | 4.75 |
2822 | 6497 | 5.105310 | TCAAGTCTTAGATGTTAGGTCTGGC | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2823 | 6498 | 6.406400 | CCTCAAGTCTTAGATGTTAGGTCTGG | 60.406 | 46.154 | 0.00 | 0.00 | 0.00 | 3.86 |
2824 | 6499 | 6.153680 | ACCTCAAGTCTTAGATGTTAGGTCTG | 59.846 | 42.308 | 4.26 | 0.00 | 28.80 | 3.51 |
2825 | 6500 | 6.257586 | ACCTCAAGTCTTAGATGTTAGGTCT | 58.742 | 40.000 | 4.26 | 0.00 | 28.80 | 3.85 |
2826 | 6501 | 6.406065 | GGACCTCAAGTCTTAGATGTTAGGTC | 60.406 | 46.154 | 19.49 | 19.49 | 46.28 | 3.85 |
2827 | 6502 | 5.422650 | GGACCTCAAGTCTTAGATGTTAGGT | 59.577 | 44.000 | 8.38 | 8.38 | 45.54 | 3.08 |
2828 | 6503 | 5.163395 | GGGACCTCAAGTCTTAGATGTTAGG | 60.163 | 48.000 | 0.00 | 0.00 | 45.54 | 2.69 |
2829 | 6504 | 5.422331 | TGGGACCTCAAGTCTTAGATGTTAG | 59.578 | 44.000 | 0.00 | 0.00 | 45.54 | 2.34 |
2832 | 6507 | 3.791320 | TGGGACCTCAAGTCTTAGATGT | 58.209 | 45.455 | 0.00 | 0.00 | 45.54 | 3.06 |
2833 | 6508 | 4.508662 | GTTGGGACCTCAAGTCTTAGATG | 58.491 | 47.826 | 0.00 | 0.00 | 45.54 | 2.90 |
2834 | 6509 | 3.519913 | GGTTGGGACCTCAAGTCTTAGAT | 59.480 | 47.826 | 0.00 | 0.00 | 45.54 | 1.98 |
2836 | 6511 | 2.637872 | TGGTTGGGACCTCAAGTCTTAG | 59.362 | 50.000 | 0.00 | 0.00 | 46.66 | 2.18 |
2837 | 6512 | 2.637872 | CTGGTTGGGACCTCAAGTCTTA | 59.362 | 50.000 | 0.00 | 0.00 | 46.66 | 2.10 |
2839 | 6514 | 1.059913 | CTGGTTGGGACCTCAAGTCT | 58.940 | 55.000 | 0.00 | 0.00 | 46.66 | 3.24 |
2840 | 6515 | 0.036875 | CCTGGTTGGGACCTCAAGTC | 59.963 | 60.000 | 0.00 | 0.00 | 46.66 | 3.01 |
2841 | 6516 | 0.401395 | TCCTGGTTGGGACCTCAAGT | 60.401 | 55.000 | 0.00 | 0.00 | 46.66 | 3.16 |
2842 | 6517 | 2.463441 | TCCTGGTTGGGACCTCAAG | 58.537 | 57.895 | 0.00 | 0.00 | 46.66 | 3.02 |
2843 | 6518 | 4.761163 | TCCTGGTTGGGACCTCAA | 57.239 | 55.556 | 0.00 | 0.00 | 46.66 | 3.02 |
2858 | 6533 | 4.910585 | CATACCCGGCAGGCGTCC | 62.911 | 72.222 | 16.17 | 0.00 | 40.58 | 4.79 |
2885 | 6560 | 4.803426 | GAGGAGCACGCCGGACTG | 62.803 | 72.222 | 5.05 | 0.00 | 0.00 | 3.51 |
2887 | 6562 | 4.373116 | TTGAGGAGCACGCCGGAC | 62.373 | 66.667 | 5.05 | 0.00 | 0.00 | 4.79 |
2888 | 6563 | 4.373116 | GTTGAGGAGCACGCCGGA | 62.373 | 66.667 | 5.05 | 0.00 | 0.00 | 5.14 |
2890 | 6565 | 4.680237 | TGGTTGAGGAGCACGCCG | 62.680 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
2891 | 6566 | 2.743928 | CTGGTTGAGGAGCACGCC | 60.744 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
2892 | 6567 | 2.743928 | CCTGGTTGAGGAGCACGC | 60.744 | 66.667 | 0.00 | 0.00 | 46.33 | 5.34 |
2893 | 6568 | 3.059982 | TCCTGGTTGAGGAGCACG | 58.940 | 61.111 | 0.00 | 0.00 | 46.96 | 5.34 |
2908 | 6583 | 2.279517 | CATACTCGGCAGGCGTCC | 60.280 | 66.667 | 17.01 | 0.00 | 0.00 | 4.79 |
2909 | 6584 | 1.299468 | CTCATACTCGGCAGGCGTC | 60.299 | 63.158 | 17.01 | 0.00 | 0.00 | 5.19 |
2910 | 6585 | 2.786495 | CCTCATACTCGGCAGGCGT | 61.786 | 63.158 | 17.01 | 0.00 | 0.00 | 5.68 |
2911 | 6586 | 2.028190 | CCTCATACTCGGCAGGCG | 59.972 | 66.667 | 10.80 | 10.80 | 0.00 | 5.52 |
2912 | 6587 | 2.280457 | GCCTCATACTCGGCAGGC | 60.280 | 66.667 | 0.00 | 0.00 | 45.59 | 4.85 |
2917 | 6592 | 4.647615 | CGGCGGCCTCATACTCGG | 62.648 | 72.222 | 18.34 | 0.00 | 0.00 | 4.63 |
2938 | 6613 | 0.819582 | GATGGATTGGTGCCAAGTGG | 59.180 | 55.000 | 9.65 | 0.00 | 39.21 | 4.00 |
2939 | 6614 | 1.843368 | AGATGGATTGGTGCCAAGTG | 58.157 | 50.000 | 9.65 | 0.00 | 39.21 | 3.16 |
2940 | 6615 | 2.225091 | TGAAGATGGATTGGTGCCAAGT | 60.225 | 45.455 | 9.65 | 0.00 | 39.21 | 3.16 |
2941 | 6616 | 2.426024 | CTGAAGATGGATTGGTGCCAAG | 59.574 | 50.000 | 9.65 | 0.00 | 39.21 | 3.61 |
2944 | 6619 | 2.295885 | CTCTGAAGATGGATTGGTGCC | 58.704 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
2945 | 6620 | 1.674962 | GCTCTGAAGATGGATTGGTGC | 59.325 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
2946 | 6621 | 2.943690 | CAGCTCTGAAGATGGATTGGTG | 59.056 | 50.000 | 0.00 | 0.00 | 35.22 | 4.17 |
2947 | 6622 | 2.575279 | ACAGCTCTGAAGATGGATTGGT | 59.425 | 45.455 | 3.60 | 0.00 | 43.33 | 3.67 |
2948 | 6623 | 3.278668 | ACAGCTCTGAAGATGGATTGG | 57.721 | 47.619 | 3.60 | 0.00 | 43.33 | 3.16 |
2949 | 6624 | 4.809958 | CAGTACAGCTCTGAAGATGGATTG | 59.190 | 45.833 | 3.60 | 0.00 | 43.33 | 2.67 |
2950 | 6625 | 4.469227 | ACAGTACAGCTCTGAAGATGGATT | 59.531 | 41.667 | 7.84 | 0.00 | 43.33 | 3.01 |
2951 | 6626 | 4.029520 | ACAGTACAGCTCTGAAGATGGAT | 58.970 | 43.478 | 7.84 | 0.00 | 43.33 | 3.41 |
2952 | 6627 | 3.435275 | ACAGTACAGCTCTGAAGATGGA | 58.565 | 45.455 | 7.84 | 0.00 | 43.33 | 3.41 |
2953 | 6628 | 3.883830 | ACAGTACAGCTCTGAAGATGG | 57.116 | 47.619 | 7.84 | 0.00 | 43.33 | 3.51 |
2954 | 6629 | 3.370366 | GCAACAGTACAGCTCTGAAGATG | 59.630 | 47.826 | 7.84 | 0.00 | 44.61 | 2.90 |
2957 | 6632 | 2.759191 | TGCAACAGTACAGCTCTGAAG | 58.241 | 47.619 | 7.84 | 1.57 | 36.81 | 3.02 |
2958 | 6633 | 2.908688 | TGCAACAGTACAGCTCTGAA | 57.091 | 45.000 | 7.84 | 0.00 | 36.81 | 3.02 |
2959 | 6634 | 2.672195 | CGATGCAACAGTACAGCTCTGA | 60.672 | 50.000 | 7.84 | 0.00 | 36.81 | 3.27 |
2960 | 6635 | 1.657594 | CGATGCAACAGTACAGCTCTG | 59.342 | 52.381 | 0.00 | 0.00 | 38.68 | 3.35 |
2961 | 6636 | 1.546029 | TCGATGCAACAGTACAGCTCT | 59.454 | 47.619 | 0.00 | 0.00 | 0.00 | 4.09 |
2962 | 6637 | 1.656095 | GTCGATGCAACAGTACAGCTC | 59.344 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
2964 | 6639 | 0.721718 | GGTCGATGCAACAGTACAGC | 59.278 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2965 | 6640 | 2.370281 | AGGTCGATGCAACAGTACAG | 57.630 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2966 | 6641 | 2.412870 | CAAGGTCGATGCAACAGTACA | 58.587 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
2967 | 6642 | 1.128692 | GCAAGGTCGATGCAACAGTAC | 59.871 | 52.381 | 4.64 | 0.00 | 43.29 | 2.73 |
2969 | 6644 | 1.237285 | GGCAAGGTCGATGCAACAGT | 61.237 | 55.000 | 11.32 | 0.00 | 45.60 | 3.55 |
2970 | 6645 | 1.503542 | GGCAAGGTCGATGCAACAG | 59.496 | 57.895 | 11.32 | 0.00 | 45.60 | 3.16 |
2971 | 6646 | 1.971167 | GGGCAAGGTCGATGCAACA | 60.971 | 57.895 | 11.32 | 0.00 | 45.60 | 3.33 |
2972 | 6647 | 2.877691 | GGGCAAGGTCGATGCAAC | 59.122 | 61.111 | 11.32 | 0.52 | 45.60 | 4.17 |
2982 | 6657 | 2.187946 | CAGCTAGACCGGGCAAGG | 59.812 | 66.667 | 11.69 | 0.00 | 37.30 | 3.61 |
2983 | 6658 | 2.512515 | GCAGCTAGACCGGGCAAG | 60.513 | 66.667 | 11.69 | 1.80 | 0.00 | 4.01 |
2987 | 6662 | 4.537433 | GGCAGCAGCTAGACCGGG | 62.537 | 72.222 | 6.32 | 0.00 | 41.70 | 5.73 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.