Multiple sequence alignment - TraesCS2D01G492700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G492700 chr2D 100.000 7794 0 0 1487 9280 590338745 590330952 0.000000e+00 14393.0
1 TraesCS2D01G492700 chr2D 100.000 1100 0 0 1 1100 590340231 590339132 0.000000e+00 2032.0
2 TraesCS2D01G492700 chr2D 96.651 418 12 2 58 474 612709951 612710367 0.000000e+00 693.0
3 TraesCS2D01G492700 chr2D 93.947 413 23 2 58 470 481968923 481969333 2.850000e-174 623.0
4 TraesCS2D01G492700 chr2D 97.222 36 0 1 1 36 590344655 590344621 1.010000e-04 60.2
5 TraesCS2D01G492700 chr2A 97.395 2188 36 6 5287 7459 724735823 724733642 0.000000e+00 3705.0
6 TraesCS2D01G492700 chr2A 96.522 1840 41 11 3362 5195 724737642 724735820 0.000000e+00 3022.0
7 TraesCS2D01G492700 chr2A 93.758 1666 72 17 1708 3351 724739400 724737745 0.000000e+00 2471.0
8 TraesCS2D01G492700 chr2A 95.666 1223 44 6 7458 8675 724733560 724732342 0.000000e+00 1956.0
9 TraesCS2D01G492700 chr2A 90.640 641 22 7 471 1099 724740379 724739765 0.000000e+00 817.0
10 TraesCS2D01G492700 chr2A 90.942 276 20 2 8967 9242 724732068 724731798 5.290000e-97 366.0
11 TraesCS2D01G492700 chr2B 96.741 1841 39 12 3362 5195 715315565 715313739 0.000000e+00 3048.0
12 TraesCS2D01G492700 chr2B 95.364 1855 50 13 5513 7340 715313550 715311705 0.000000e+00 2916.0
13 TraesCS2D01G492700 chr2B 94.361 1667 54 23 1708 3351 715317317 715315668 0.000000e+00 2521.0
14 TraesCS2D01G492700 chr2B 94.449 1333 62 3 7343 8675 715311614 715310294 0.000000e+00 2041.0
15 TraesCS2D01G492700 chr2B 91.667 600 20 6 516 1099 715318263 715317678 0.000000e+00 804.0
16 TraesCS2D01G492700 chr2B 97.073 205 4 2 5287 5489 715313742 715313538 2.480000e-90 344.0
17 TraesCS2D01G492700 chr2B 88.400 250 17 7 9005 9242 715310063 715309814 3.280000e-74 291.0
18 TraesCS2D01G492700 chr2B 88.976 127 10 4 5181 5306 575876515 575876638 4.490000e-33 154.0
19 TraesCS2D01G492700 chr2B 89.623 106 6 3 8821 8922 715310173 715310069 7.560000e-26 130.0
20 TraesCS2D01G492700 chr2B 91.525 59 2 2 1 58 715324562 715324506 2.780000e-10 78.7
21 TraesCS2D01G492700 chr2B 97.143 35 1 0 8720 8754 715310282 715310248 1.010000e-04 60.2
22 TraesCS2D01G492700 chr1D 96.368 413 13 2 59 470 375946040 375946451 0.000000e+00 678.0
23 TraesCS2D01G492700 chr1D 76.551 806 133 32 5313 6093 54907854 54908628 3.140000e-104 390.0
24 TraesCS2D01G492700 chr7D 95.227 419 15 4 59 474 511139412 511138996 0.000000e+00 658.0
25 TraesCS2D01G492700 chr7D 96.907 97 3 0 5193 5289 407261205 407261301 7.460000e-36 163.0
26 TraesCS2D01G492700 chr6D 95.377 411 18 1 61 471 384444640 384444231 0.000000e+00 652.0
27 TraesCS2D01G492700 chr6D 92.757 428 27 3 52 476 2098950 2099376 4.760000e-172 616.0
28 TraesCS2D01G492700 chr5A 93.976 415 24 1 57 470 564386221 564386635 2.200000e-175 627.0
29 TraesCS2D01G492700 chr5A 96.040 101 4 0 5189 5289 60248623 60248523 2.070000e-36 165.0
30 TraesCS2D01G492700 chr7A 93.735 415 22 3 58 470 276144531 276144943 3.680000e-173 619.0
31 TraesCS2D01G492700 chr4A 92.506 427 28 4 58 484 45412363 45411941 7.970000e-170 608.0
32 TraesCS2D01G492700 chr4A 92.920 113 7 1 5178 5289 638170098 638169986 7.460000e-36 163.0
33 TraesCS2D01G492700 chrUn 76.570 892 148 41 5292 6152 3700430 3699569 5.150000e-117 433.0
34 TraesCS2D01G492700 chrUn 75.347 576 105 28 2629 3189 3832505 3831952 9.310000e-60 243.0
35 TraesCS2D01G492700 chr1A 76.047 860 147 37 5321 6152 53853254 53854082 8.740000e-105 392.0
36 TraesCS2D01G492700 chr1A 76.180 445 84 11 5289 5730 53868774 53869199 2.030000e-51 215.0
37 TraesCS2D01G492700 chr1A 80.269 223 39 5 2657 2876 53850596 53850816 7.460000e-36 163.0
38 TraesCS2D01G492700 chr1B 78.448 348 52 9 5527 5859 90436138 90435799 1.220000e-48 206.0
39 TraesCS2D01G492700 chr1B 91.379 116 8 2 5193 5307 301472171 301472057 3.470000e-34 158.0
40 TraesCS2D01G492700 chr4D 95.327 107 5 0 5190 5296 54412659 54412553 4.460000e-38 171.0
41 TraesCS2D01G492700 chr4B 95.238 105 5 0 5185 5289 610072637 610072533 5.760000e-37 167.0
42 TraesCS2D01G492700 chr5D 92.920 113 6 2 5193 5304 429243177 429243288 7.460000e-36 163.0
43 TraesCS2D01G492700 chr3D 95.960 99 4 0 5193 5291 19269814 19269716 2.680000e-35 161.0
44 TraesCS2D01G492700 chr6A 85.542 83 9 2 3635 3717 592694161 592694082 5.970000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G492700 chr2D 590330952 590340231 9279 True 8212.500000 14393 100.000000 1 9280 2 chr2D.!!$R2 9279
1 TraesCS2D01G492700 chr2A 724731798 724740379 8581 True 2056.166667 3705 94.153833 471 9242 6 chr2A.!!$R1 8771
2 TraesCS2D01G492700 chr2B 715309814 715318263 8449 True 1350.577778 3048 93.869000 516 9242 9 chr2B.!!$R2 8726
3 TraesCS2D01G492700 chr1D 54907854 54908628 774 False 390.000000 390 76.551000 5313 6093 1 chr1D.!!$F1 780
4 TraesCS2D01G492700 chrUn 3699569 3700430 861 True 433.000000 433 76.570000 5292 6152 1 chrUn.!!$R1 860
5 TraesCS2D01G492700 chrUn 3831952 3832505 553 True 243.000000 243 75.347000 2629 3189 1 chrUn.!!$R2 560
6 TraesCS2D01G492700 chr1A 53850596 53854082 3486 False 277.500000 392 78.158000 2657 6152 2 chr1A.!!$F2 3495


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.032117 ATCGGACAGGGATCAGGTGA 60.032 55.000 0.00 0.00 0.00 4.02 F
98 99 0.040157 CACCTTTGCATGTCACCGTG 60.040 55.000 0.00 0.00 0.00 4.94 F
1540 1562 0.032678 ATCGGGTGATTAGAGCTGCG 59.967 55.000 0.00 0.00 0.00 5.18 F
1695 1721 0.035056 AGTTGCTAGCTCCCGCAATT 60.035 50.000 17.23 12.37 46.42 2.32 F
2446 2501 0.338467 TAGCAAGGCCAGGACTAGGA 59.662 55.000 5.01 0.00 0.00 2.94 F
3328 3406 0.382158 TGCTATCTCTTGTCGAGCCG 59.618 55.000 0.00 0.00 39.70 5.52 F
3430 3784 1.475280 GCTGCAGAAATTGAGGCATCA 59.525 47.619 20.43 0.00 35.45 3.07 F
5013 5503 0.598065 CTGCTTGGGTTTAGGTGCAC 59.402 55.000 8.80 8.80 0.00 4.57 F
5206 5840 0.971386 TGTTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.00 0.00 3.62 F
5208 5842 1.345415 GTTGTACTCCCTCCGTTCCAA 59.655 52.381 0.00 0.00 0.00 3.53 F
5209 5843 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28 F
6686 7399 2.048023 CATGCACCACGCCCAGATT 61.048 57.895 0.00 0.00 41.33 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1521 1543 0.032678 CGCAGCTCTAATCACCCGAT 59.967 55.000 0.00 0.00 0.00 4.18 R
1719 1745 0.167470 CACAAACCTGCAGCATCGAG 59.833 55.000 8.66 0.00 0.00 4.04 R
2446 2501 1.127343 GGTTCTCAGGCTAGCATCCT 58.873 55.000 18.24 0.99 0.00 3.24 R
3351 3429 1.601166 ACCAAAAGGTGTAACGGCTC 58.399 50.000 0.00 0.00 38.12 4.70 R
3352 3430 1.951602 GAACCAAAAGGTGTAACGGCT 59.048 47.619 0.00 0.00 38.12 5.52 R
4702 5192 0.175760 TATCGGTGTGCAGAAGGCTC 59.824 55.000 0.00 0.00 45.15 4.70 R
5272 5906 1.719529 TGTTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53 R
6326 7038 7.285629 TGACTGTTCACCTGGATCTATTACTAG 59.714 40.741 0.00 0.00 0.00 2.57 R
7051 7785 3.547468 CCAGCTGAGACAAAAACAAAACG 59.453 43.478 17.39 0.00 0.00 3.60 R
7439 8261 5.991933 TTCTATATCCCAAGAGCTGCTAG 57.008 43.478 0.15 0.00 0.00 3.42 R
7440 8262 6.270927 ACAATTCTATATCCCAAGAGCTGCTA 59.729 38.462 0.15 0.00 0.00 3.49 R
8881 9829 0.320073 TGCGTACTGGCACCTTACAC 60.320 55.000 0.00 0.00 38.17 2.90 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.453480 TGGTCCCACAAGAAAGAAATCT 57.547 40.909 0.00 0.00 0.00 2.40
22 23 5.576563 TGGTCCCACAAGAAAGAAATCTA 57.423 39.130 0.00 0.00 0.00 1.98
23 24 5.560724 TGGTCCCACAAGAAAGAAATCTAG 58.439 41.667 0.00 0.00 0.00 2.43
24 25 4.944317 GGTCCCACAAGAAAGAAATCTAGG 59.056 45.833 0.00 0.00 0.00 3.02
25 26 5.280521 GGTCCCACAAGAAAGAAATCTAGGA 60.281 44.000 0.00 0.00 0.00 2.94
26 27 5.644206 GTCCCACAAGAAAGAAATCTAGGAC 59.356 44.000 0.00 0.00 32.84 3.85
27 28 5.548056 TCCCACAAGAAAGAAATCTAGGACT 59.452 40.000 0.00 0.00 0.00 3.85
28 29 6.729100 TCCCACAAGAAAGAAATCTAGGACTA 59.271 38.462 0.00 0.00 0.00 2.59
29 30 7.403231 TCCCACAAGAAAGAAATCTAGGACTAT 59.597 37.037 0.00 0.00 0.00 2.12
30 31 7.713073 CCCACAAGAAAGAAATCTAGGACTATC 59.287 40.741 0.00 0.00 0.00 2.08
31 32 8.260818 CCACAAGAAAGAAATCTAGGACTATCA 58.739 37.037 0.00 0.00 0.00 2.15
32 33 9.311916 CACAAGAAAGAAATCTAGGACTATCAG 57.688 37.037 0.00 0.00 0.00 2.90
33 34 9.261035 ACAAGAAAGAAATCTAGGACTATCAGA 57.739 33.333 0.00 0.00 0.00 3.27
41 42 8.894768 AAATCTAGGACTATCAGAAAATTCCG 57.105 34.615 0.00 0.00 0.00 4.30
42 43 6.406692 TCTAGGACTATCAGAAAATTCCGG 57.593 41.667 0.00 0.00 0.00 5.14
43 44 6.134055 TCTAGGACTATCAGAAAATTCCGGA 58.866 40.000 0.00 0.00 0.00 5.14
44 45 5.693769 AGGACTATCAGAAAATTCCGGAA 57.306 39.130 21.37 21.37 0.00 4.30
45 46 5.429130 AGGACTATCAGAAAATTCCGGAAC 58.571 41.667 21.56 6.74 0.00 3.62
46 47 4.575236 GGACTATCAGAAAATTCCGGAACC 59.425 45.833 21.56 7.49 0.00 3.62
47 48 5.174037 ACTATCAGAAAATTCCGGAACCA 57.826 39.130 21.56 0.00 0.00 3.67
48 49 5.755849 ACTATCAGAAAATTCCGGAACCAT 58.244 37.500 21.56 8.20 0.00 3.55
49 50 5.823045 ACTATCAGAAAATTCCGGAACCATC 59.177 40.000 21.56 16.95 0.00 3.51
50 51 3.006940 TCAGAAAATTCCGGAACCATCG 58.993 45.455 21.56 13.00 0.00 3.84
51 52 1.743394 AGAAAATTCCGGAACCATCGC 59.257 47.619 21.56 7.25 0.00 4.58
52 53 1.743394 GAAAATTCCGGAACCATCGCT 59.257 47.619 21.56 0.00 0.00 4.93
53 54 1.094785 AAATTCCGGAACCATCGCTG 58.905 50.000 21.56 0.00 0.00 5.18
54 55 1.376609 AATTCCGGAACCATCGCTGC 61.377 55.000 21.56 0.00 0.00 5.25
55 56 2.535485 ATTCCGGAACCATCGCTGCA 62.535 55.000 21.56 0.00 0.00 4.41
56 57 2.514592 CCGGAACCATCGCTGCAT 60.515 61.111 0.00 0.00 0.00 3.96
57 58 2.537560 CCGGAACCATCGCTGCATC 61.538 63.158 0.00 0.00 0.00 3.91
58 59 2.874694 CGGAACCATCGCTGCATCG 61.875 63.158 2.97 2.97 0.00 3.84
59 60 2.537560 GGAACCATCGCTGCATCGG 61.538 63.158 10.42 0.00 0.00 4.18
60 61 1.521457 GAACCATCGCTGCATCGGA 60.521 57.895 10.42 0.00 0.00 4.55
61 62 1.766143 GAACCATCGCTGCATCGGAC 61.766 60.000 10.42 0.00 0.00 4.79
62 63 2.202919 CCATCGCTGCATCGGACA 60.203 61.111 10.42 0.00 0.00 4.02
63 64 2.242572 CCATCGCTGCATCGGACAG 61.243 63.158 10.42 0.00 38.22 3.51
64 65 2.107750 ATCGCTGCATCGGACAGG 59.892 61.111 10.42 0.00 35.62 4.00
65 66 3.451556 ATCGCTGCATCGGACAGGG 62.452 63.158 10.42 9.83 46.34 4.45
67 68 2.507944 GCTGCATCGGACAGGGAT 59.492 61.111 0.00 0.00 35.62 3.85
68 69 1.596477 GCTGCATCGGACAGGGATC 60.596 63.158 0.00 0.00 35.62 3.36
69 70 1.825341 CTGCATCGGACAGGGATCA 59.175 57.895 0.00 0.00 0.00 2.92
70 71 0.249784 CTGCATCGGACAGGGATCAG 60.250 60.000 0.00 0.00 0.00 2.90
71 72 1.070445 GCATCGGACAGGGATCAGG 59.930 63.158 0.00 0.00 0.00 3.86
72 73 1.690219 GCATCGGACAGGGATCAGGT 61.690 60.000 0.00 0.00 0.00 4.00
73 74 0.105593 CATCGGACAGGGATCAGGTG 59.894 60.000 0.00 0.00 0.00 4.00
74 75 0.032117 ATCGGACAGGGATCAGGTGA 60.032 55.000 0.00 0.00 0.00 4.02
75 76 0.970937 TCGGACAGGGATCAGGTGAC 60.971 60.000 0.00 0.00 0.00 3.67
76 77 1.257750 CGGACAGGGATCAGGTGACA 61.258 60.000 0.00 0.00 0.00 3.58
77 78 1.207791 GGACAGGGATCAGGTGACAT 58.792 55.000 0.00 0.00 0.00 3.06
78 79 1.134280 GGACAGGGATCAGGTGACATG 60.134 57.143 0.00 0.00 0.00 3.21
79 80 0.254178 ACAGGGATCAGGTGACATGC 59.746 55.000 0.00 0.00 0.00 4.06
80 81 0.253894 CAGGGATCAGGTGACATGCA 59.746 55.000 0.00 0.00 0.00 3.96
81 82 0.254178 AGGGATCAGGTGACATGCAC 59.746 55.000 10.63 10.63 46.98 4.57
97 98 2.330254 CACCTTTGCATGTCACCGT 58.670 52.632 0.00 0.00 0.00 4.83
98 99 0.040157 CACCTTTGCATGTCACCGTG 60.040 55.000 0.00 0.00 0.00 4.94
99 100 0.465460 ACCTTTGCATGTCACCGTGT 60.465 50.000 0.00 0.00 0.00 4.49
100 101 0.040157 CCTTTGCATGTCACCGTGTG 60.040 55.000 0.00 0.00 34.45 3.82
101 102 0.943673 CTTTGCATGTCACCGTGTGA 59.056 50.000 0.00 3.02 40.50 3.58
108 109 2.809010 TCACCGTGTGACTTGCGA 59.191 55.556 0.00 0.00 37.67 5.10
109 110 1.590525 TCACCGTGTGACTTGCGAC 60.591 57.895 0.00 0.00 37.67 5.19
110 111 2.279918 ACCGTGTGACTTGCGACC 60.280 61.111 0.00 0.00 0.00 4.79
111 112 3.041940 CCGTGTGACTTGCGACCC 61.042 66.667 0.00 0.00 0.00 4.46
112 113 2.279851 CGTGTGACTTGCGACCCA 60.280 61.111 0.00 0.00 0.00 4.51
113 114 1.885388 CGTGTGACTTGCGACCCAA 60.885 57.895 0.00 0.00 0.00 4.12
114 115 1.433053 CGTGTGACTTGCGACCCAAA 61.433 55.000 0.00 0.00 31.94 3.28
115 116 0.951558 GTGTGACTTGCGACCCAAAT 59.048 50.000 0.00 0.00 31.94 2.32
116 117 1.336755 GTGTGACTTGCGACCCAAATT 59.663 47.619 0.00 0.00 31.94 1.82
117 118 1.606668 TGTGACTTGCGACCCAAATTC 59.393 47.619 0.00 0.00 31.94 2.17
118 119 1.606668 GTGACTTGCGACCCAAATTCA 59.393 47.619 0.00 0.00 31.94 2.57
119 120 2.034053 GTGACTTGCGACCCAAATTCAA 59.966 45.455 0.00 0.00 31.09 2.69
120 121 2.690497 TGACTTGCGACCCAAATTCAAA 59.310 40.909 0.00 0.00 31.94 2.69
121 122 3.320541 TGACTTGCGACCCAAATTCAAAT 59.679 39.130 0.00 0.00 31.94 2.32
122 123 4.202202 TGACTTGCGACCCAAATTCAAATT 60.202 37.500 0.00 0.00 31.94 1.82
123 124 4.702831 ACTTGCGACCCAAATTCAAATTT 58.297 34.783 0.00 0.00 39.07 1.82
124 125 5.848406 ACTTGCGACCCAAATTCAAATTTA 58.152 33.333 0.63 0.00 36.52 1.40
125 126 6.284459 ACTTGCGACCCAAATTCAAATTTAA 58.716 32.000 0.63 0.00 36.52 1.52
126 127 6.763610 ACTTGCGACCCAAATTCAAATTTAAA 59.236 30.769 0.63 0.00 36.52 1.52
127 128 6.532365 TGCGACCCAAATTCAAATTTAAAC 57.468 33.333 0.63 0.00 36.52 2.01
128 129 6.049149 TGCGACCCAAATTCAAATTTAAACA 58.951 32.000 0.63 0.00 36.52 2.83
129 130 6.708054 TGCGACCCAAATTCAAATTTAAACAT 59.292 30.769 0.63 0.00 36.52 2.71
130 131 7.227512 TGCGACCCAAATTCAAATTTAAACATT 59.772 29.630 0.63 0.00 36.52 2.71
131 132 8.713271 GCGACCCAAATTCAAATTTAAACATTA 58.287 29.630 0.63 0.00 36.52 1.90
134 135 9.765795 ACCCAAATTCAAATTTAAACATTACGA 57.234 25.926 0.63 0.00 36.52 3.43
169 170 5.910637 AAAATCATGCATGTTCACAACAC 57.089 34.783 25.43 0.00 45.50 3.32
170 171 4.587584 AATCATGCATGTTCACAACACA 57.412 36.364 25.43 3.20 45.50 3.72
171 172 4.794278 ATCATGCATGTTCACAACACAT 57.206 36.364 25.43 5.53 45.50 3.21
172 173 5.900865 ATCATGCATGTTCACAACACATA 57.099 34.783 25.43 2.45 45.50 2.29
173 174 5.900865 TCATGCATGTTCACAACACATAT 57.099 34.783 25.43 0.00 45.50 1.78
174 175 6.270156 TCATGCATGTTCACAACACATATT 57.730 33.333 25.43 0.00 45.50 1.28
175 176 7.388460 TCATGCATGTTCACAACACATATTA 57.612 32.000 25.43 0.00 45.50 0.98
176 177 7.824672 TCATGCATGTTCACAACACATATTAA 58.175 30.769 25.43 0.00 45.50 1.40
177 178 7.969508 TCATGCATGTTCACAACACATATTAAG 59.030 33.333 25.43 0.00 45.50 1.85
178 179 7.446001 TGCATGTTCACAACACATATTAAGA 57.554 32.000 0.00 0.00 45.50 2.10
179 180 8.054152 TGCATGTTCACAACACATATTAAGAT 57.946 30.769 0.00 0.00 45.50 2.40
180 181 9.171877 TGCATGTTCACAACACATATTAAGATA 57.828 29.630 0.00 0.00 45.50 1.98
226 227 9.801714 CAAAATTCAAAACATACATCAAGAAGC 57.198 29.630 0.00 0.00 0.00 3.86
227 228 9.545105 AAAATTCAAAACATACATCAAGAAGCA 57.455 25.926 0.00 0.00 0.00 3.91
228 229 9.545105 AAATTCAAAACATACATCAAGAAGCAA 57.455 25.926 0.00 0.00 0.00 3.91
229 230 9.545105 AATTCAAAACATACATCAAGAAGCAAA 57.455 25.926 0.00 0.00 0.00 3.68
230 231 8.939201 TTCAAAACATACATCAAGAAGCAAAA 57.061 26.923 0.00 0.00 0.00 2.44
231 232 8.939201 TCAAAACATACATCAAGAAGCAAAAA 57.061 26.923 0.00 0.00 0.00 1.94
254 255 9.566432 AAAAAGAGAAACTCAGATGTGAATAGT 57.434 29.630 0.00 0.00 32.06 2.12
263 264 9.634021 AACTCAGATGTGAATAGTATACAGAGA 57.366 33.333 5.50 0.00 30.14 3.10
264 265 9.634021 ACTCAGATGTGAATAGTATACAGAGAA 57.366 33.333 5.50 0.00 30.14 2.87
265 266 9.891828 CTCAGATGTGAATAGTATACAGAGAAC 57.108 37.037 5.50 0.00 30.14 3.01
266 267 8.851145 TCAGATGTGAATAGTATACAGAGAACC 58.149 37.037 5.50 0.00 0.00 3.62
267 268 8.633561 CAGATGTGAATAGTATACAGAGAACCA 58.366 37.037 5.50 0.00 0.00 3.67
268 269 9.373450 AGATGTGAATAGTATACAGAGAACCAT 57.627 33.333 5.50 0.00 0.00 3.55
269 270 9.988815 GATGTGAATAGTATACAGAGAACCATT 57.011 33.333 5.50 0.00 0.00 3.16
270 271 9.988815 ATGTGAATAGTATACAGAGAACCATTC 57.011 33.333 5.50 2.26 0.00 2.67
271 272 8.135529 TGTGAATAGTATACAGAGAACCATTCG 58.864 37.037 5.50 0.00 34.02 3.34
272 273 7.115095 GTGAATAGTATACAGAGAACCATTCGC 59.885 40.741 5.50 4.22 34.02 4.70
273 274 6.650427 ATAGTATACAGAGAACCATTCGCA 57.350 37.500 5.50 0.00 34.02 5.10
274 275 5.339008 AGTATACAGAGAACCATTCGCAA 57.661 39.130 5.50 0.00 34.02 4.85
275 276 5.109903 AGTATACAGAGAACCATTCGCAAC 58.890 41.667 5.50 0.00 34.02 4.17
276 277 2.550830 ACAGAGAACCATTCGCAACT 57.449 45.000 0.00 0.00 34.02 3.16
277 278 3.678056 ACAGAGAACCATTCGCAACTA 57.322 42.857 0.00 0.00 34.02 2.24
278 279 4.207891 ACAGAGAACCATTCGCAACTAT 57.792 40.909 0.00 0.00 34.02 2.12
279 280 4.579869 ACAGAGAACCATTCGCAACTATT 58.420 39.130 0.00 0.00 34.02 1.73
280 281 4.631813 ACAGAGAACCATTCGCAACTATTC 59.368 41.667 0.00 0.00 34.02 1.75
281 282 4.631377 CAGAGAACCATTCGCAACTATTCA 59.369 41.667 0.00 0.00 34.02 2.57
282 283 5.295292 CAGAGAACCATTCGCAACTATTCAT 59.705 40.000 0.00 0.00 34.02 2.57
283 284 5.295292 AGAGAACCATTCGCAACTATTCATG 59.705 40.000 0.00 0.00 34.02 3.07
284 285 5.185454 AGAACCATTCGCAACTATTCATGA 58.815 37.500 0.00 0.00 34.02 3.07
285 286 4.882671 ACCATTCGCAACTATTCATGAC 57.117 40.909 0.00 0.00 0.00 3.06
286 287 4.260985 ACCATTCGCAACTATTCATGACA 58.739 39.130 0.00 0.00 0.00 3.58
287 288 4.333649 ACCATTCGCAACTATTCATGACAG 59.666 41.667 0.00 0.00 0.00 3.51
288 289 4.571984 CCATTCGCAACTATTCATGACAGA 59.428 41.667 9.90 0.00 0.00 3.41
289 290 5.237996 CCATTCGCAACTATTCATGACAGAT 59.762 40.000 9.90 0.00 0.00 2.90
290 291 6.238566 CCATTCGCAACTATTCATGACAGATT 60.239 38.462 9.90 0.00 0.00 2.40
291 292 6.741992 TTCGCAACTATTCATGACAGATTT 57.258 33.333 9.90 0.00 0.00 2.17
292 293 6.349973 TCGCAACTATTCATGACAGATTTC 57.650 37.500 9.90 0.00 0.00 2.17
293 294 6.108687 TCGCAACTATTCATGACAGATTTCT 58.891 36.000 9.90 0.00 0.00 2.52
294 295 6.256539 TCGCAACTATTCATGACAGATTTCTC 59.743 38.462 9.90 0.00 0.00 2.87
295 296 6.257411 CGCAACTATTCATGACAGATTTCTCT 59.743 38.462 9.90 0.00 0.00 3.10
296 297 7.201591 CGCAACTATTCATGACAGATTTCTCTT 60.202 37.037 9.90 0.00 0.00 2.85
297 298 8.457261 GCAACTATTCATGACAGATTTCTCTTT 58.543 33.333 9.90 0.00 0.00 2.52
320 321 7.621832 TTTTTGCTTCTTGATGTATGTTTCG 57.378 32.000 0.00 0.00 0.00 3.46
321 322 6.552859 TTTGCTTCTTGATGTATGTTTCGA 57.447 33.333 0.00 0.00 0.00 3.71
322 323 6.552859 TTGCTTCTTGATGTATGTTTCGAA 57.447 33.333 0.00 0.00 0.00 3.71
323 324 6.741992 TGCTTCTTGATGTATGTTTCGAAT 57.258 33.333 0.00 0.00 0.00 3.34
324 325 7.144722 TGCTTCTTGATGTATGTTTCGAATT 57.855 32.000 0.00 0.00 0.00 2.17
325 326 7.592938 TGCTTCTTGATGTATGTTTCGAATTT 58.407 30.769 0.00 0.00 0.00 1.82
326 327 8.081633 TGCTTCTTGATGTATGTTTCGAATTTT 58.918 29.630 0.00 0.00 0.00 1.82
327 328 8.368126 GCTTCTTGATGTATGTTTCGAATTTTG 58.632 33.333 0.00 0.00 0.00 2.44
328 329 9.611284 CTTCTTGATGTATGTTTCGAATTTTGA 57.389 29.630 0.00 0.00 0.00 2.69
330 331 9.773328 TCTTGATGTATGTTTCGAATTTTGATC 57.227 29.630 0.00 0.00 0.00 2.92
331 332 9.778993 CTTGATGTATGTTTCGAATTTTGATCT 57.221 29.630 0.00 0.00 0.00 2.75
332 333 9.558648 TTGATGTATGTTTCGAATTTTGATCTG 57.441 29.630 0.00 0.00 0.00 2.90
333 334 8.945057 TGATGTATGTTTCGAATTTTGATCTGA 58.055 29.630 0.00 0.00 0.00 3.27
334 335 9.773328 GATGTATGTTTCGAATTTTGATCTGAA 57.227 29.630 0.00 0.00 0.00 3.02
367 368 9.277783 AGGAATTATCTTAATATGTGCTGTGAC 57.722 33.333 0.00 0.00 0.00 3.67
368 369 8.507249 GGAATTATCTTAATATGTGCTGTGACC 58.493 37.037 0.00 0.00 0.00 4.02
369 370 8.978874 AATTATCTTAATATGTGCTGTGACCA 57.021 30.769 0.00 0.00 0.00 4.02
370 371 9.578576 AATTATCTTAATATGTGCTGTGACCAT 57.421 29.630 0.00 0.00 0.00 3.55
371 372 6.872628 ATCTTAATATGTGCTGTGACCATG 57.127 37.500 0.00 0.00 0.00 3.66
372 373 4.576053 TCTTAATATGTGCTGTGACCATGC 59.424 41.667 0.00 0.00 0.00 4.06
373 374 2.423446 ATATGTGCTGTGACCATGCA 57.577 45.000 0.00 0.00 0.00 3.96
374 375 2.423446 TATGTGCTGTGACCATGCAT 57.577 45.000 0.00 0.00 39.00 3.96
375 376 0.815095 ATGTGCTGTGACCATGCATG 59.185 50.000 20.19 20.19 39.00 4.06
376 377 0.250814 TGTGCTGTGACCATGCATGA 60.251 50.000 28.31 5.25 39.00 3.07
377 378 1.100510 GTGCTGTGACCATGCATGAT 58.899 50.000 28.31 11.89 39.00 2.45
378 379 1.475280 GTGCTGTGACCATGCATGATT 59.525 47.619 28.31 14.21 39.00 2.57
379 380 2.094390 GTGCTGTGACCATGCATGATTT 60.094 45.455 28.31 11.54 39.00 2.17
380 381 2.563620 TGCTGTGACCATGCATGATTTT 59.436 40.909 28.31 8.93 0.00 1.82
381 382 3.007074 TGCTGTGACCATGCATGATTTTT 59.993 39.130 28.31 6.36 0.00 1.94
417 418 9.443283 TTTCGCAATGTTTAAATTTGAATTTGG 57.557 25.926 14.55 10.35 38.90 3.28
418 419 7.579726 TCGCAATGTTTAAATTTGAATTTGGG 58.420 30.769 19.99 19.99 38.90 4.12
419 420 7.227512 TCGCAATGTTTAAATTTGAATTTGGGT 59.772 29.630 22.35 1.38 38.90 4.51
420 421 7.533561 CGCAATGTTTAAATTTGAATTTGGGTC 59.466 33.333 18.91 7.81 38.90 4.46
421 422 7.533561 GCAATGTTTAAATTTGAATTTGGGTCG 59.466 33.333 14.55 0.00 38.90 4.79
422 423 6.532365 TGTTTAAATTTGAATTTGGGTCGC 57.468 33.333 11.02 0.00 38.90 5.19
423 424 6.049149 TGTTTAAATTTGAATTTGGGTCGCA 58.951 32.000 11.02 0.00 38.90 5.10
424 425 6.538742 TGTTTAAATTTGAATTTGGGTCGCAA 59.461 30.769 11.02 0.00 38.90 4.85
425 426 6.777526 TTAAATTTGAATTTGGGTCGCAAG 57.222 33.333 11.02 0.00 38.90 4.01
426 427 4.335400 AATTTGAATTTGGGTCGCAAGT 57.665 36.364 2.29 0.00 39.48 3.16
427 428 3.363341 TTTGAATTTGGGTCGCAAGTC 57.637 42.857 2.29 5.64 39.48 3.01
428 429 1.974265 TGAATTTGGGTCGCAAGTCA 58.026 45.000 11.68 11.68 39.48 3.41
429 430 1.606668 TGAATTTGGGTCGCAAGTCAC 59.393 47.619 11.68 5.27 39.48 3.67
430 431 1.606668 GAATTTGGGTCGCAAGTCACA 59.393 47.619 2.29 0.00 36.91 3.58
431 432 0.951558 ATTTGGGTCGCAAGTCACAC 59.048 50.000 2.29 0.00 38.86 3.82
432 433 1.433053 TTTGGGTCGCAAGTCACACG 61.433 55.000 2.29 0.00 38.86 4.49
433 434 3.041940 GGGTCGCAAGTCACACGG 61.042 66.667 0.00 0.00 39.48 4.94
434 435 2.279918 GGTCGCAAGTCACACGGT 60.280 61.111 0.00 0.00 39.48 4.83
435 436 2.594962 GGTCGCAAGTCACACGGTG 61.595 63.158 6.58 6.58 39.48 4.94
436 437 1.590525 GTCGCAAGTCACACGGTGA 60.591 57.895 16.29 0.00 40.50 4.02
443 444 4.865865 TCACACGGTGACATGCAA 57.134 50.000 16.29 0.00 37.67 4.08
444 445 3.086733 TCACACGGTGACATGCAAA 57.913 47.368 16.29 0.00 37.67 3.68
445 446 0.943673 TCACACGGTGACATGCAAAG 59.056 50.000 16.29 0.00 37.67 2.77
446 447 0.040157 CACACGGTGACATGCAAAGG 60.040 55.000 16.29 0.00 35.23 3.11
447 448 0.465460 ACACGGTGACATGCAAAGGT 60.465 50.000 16.29 0.00 0.00 3.50
448 449 0.040157 CACGGTGACATGCAAAGGTG 60.040 55.000 0.74 0.00 0.00 4.00
464 465 2.785868 GTGCATGTCACCAGATCCC 58.214 57.895 8.54 0.00 39.79 3.85
465 466 0.254178 GTGCATGTCACCAGATCCCT 59.746 55.000 8.54 0.00 39.79 4.20
466 467 0.253894 TGCATGTCACCAGATCCCTG 59.746 55.000 0.00 0.00 40.09 4.45
467 468 0.254178 GCATGTCACCAGATCCCTGT 59.746 55.000 0.00 0.00 38.74 4.00
468 469 1.745141 GCATGTCACCAGATCCCTGTC 60.745 57.143 0.00 0.00 38.74 3.51
469 470 1.134280 CATGTCACCAGATCCCTGTCC 60.134 57.143 0.00 0.00 38.74 4.02
595 596 3.730761 CACAAGCCAGCCTCGCAC 61.731 66.667 0.00 0.00 0.00 5.34
656 657 3.312146 CCTCAACCAAAAACACAAATGCC 59.688 43.478 0.00 0.00 0.00 4.40
659 660 2.916640 ACCAAAAACACAAATGCCCTG 58.083 42.857 0.00 0.00 0.00 4.45
663 664 0.393820 AAACACAAATGCCCTGCCAG 59.606 50.000 0.00 0.00 0.00 4.85
730 731 2.113774 CACAGGCCAGCCTCACAA 59.886 61.111 8.61 0.00 46.28 3.33
896 908 0.599060 TCGATTTCAAAAACCGCCCC 59.401 50.000 0.00 0.00 0.00 5.80
1516 1538 0.384974 GCGCGTCCAAATGTTTCGAA 60.385 50.000 8.43 0.00 0.00 3.71
1518 1540 1.904412 CGCGTCCAAATGTTTCGAATG 59.096 47.619 0.00 0.00 0.00 2.67
1520 1542 3.423776 CGCGTCCAAATGTTTCGAATGTA 60.424 43.478 0.00 0.00 0.00 2.29
1521 1543 4.468643 GCGTCCAAATGTTTCGAATGTAA 58.531 39.130 0.00 0.00 0.00 2.41
1522 1544 5.092781 GCGTCCAAATGTTTCGAATGTAAT 58.907 37.500 0.00 0.00 0.00 1.89
1523 1545 5.227184 GCGTCCAAATGTTTCGAATGTAATC 59.773 40.000 0.00 0.00 0.00 1.75
1525 1547 5.737290 GTCCAAATGTTTCGAATGTAATCGG 59.263 40.000 0.00 0.00 42.92 4.18
1526 1548 5.034152 CCAAATGTTTCGAATGTAATCGGG 58.966 41.667 0.00 0.00 42.92 5.14
1527 1549 5.392595 CCAAATGTTTCGAATGTAATCGGGT 60.393 40.000 0.00 0.00 42.92 5.28
1529 1551 3.927854 TGTTTCGAATGTAATCGGGTGA 58.072 40.909 0.00 0.00 42.92 4.02
1530 1552 4.509616 TGTTTCGAATGTAATCGGGTGAT 58.490 39.130 0.00 0.00 42.92 3.06
1531 1553 4.938832 TGTTTCGAATGTAATCGGGTGATT 59.061 37.500 0.00 0.00 46.41 2.57
1532 1554 6.107343 TGTTTCGAATGTAATCGGGTGATTA 58.893 36.000 0.00 0.00 42.99 1.75
1533 1555 6.256975 TGTTTCGAATGTAATCGGGTGATTAG 59.743 38.462 0.00 0.00 45.34 1.73
1534 1556 5.777850 TCGAATGTAATCGGGTGATTAGA 57.222 39.130 0.00 0.00 45.34 2.10
1537 1559 5.542779 GAATGTAATCGGGTGATTAGAGCT 58.457 41.667 0.00 0.00 45.34 4.09
1540 1562 0.032678 ATCGGGTGATTAGAGCTGCG 59.967 55.000 0.00 0.00 0.00 5.18
1545 1567 3.341835 GATTAGAGCTGCGCGGGC 61.342 66.667 19.75 18.81 40.52 6.13
1560 1582 1.299976 GGGCGTGAAGTGAGGGAAT 59.700 57.895 0.00 0.00 0.00 3.01
1565 1587 2.673368 GCGTGAAGTGAGGGAATTAGTG 59.327 50.000 0.00 0.00 0.00 2.74
1569 1591 3.056107 TGAAGTGAGGGAATTAGTGACCG 60.056 47.826 0.00 0.00 0.00 4.79
1575 1597 2.078392 GGGAATTAGTGACCGCGAAAA 58.922 47.619 8.23 0.00 0.00 2.29
1576 1598 2.485038 GGGAATTAGTGACCGCGAAAAA 59.515 45.455 8.23 0.00 0.00 1.94
1603 1625 3.257624 GGAGTGAAACGAGGGAAGTAGAA 59.742 47.826 0.00 0.00 45.86 2.10
1605 1627 5.074584 AGTGAAACGAGGGAAGTAGAATC 57.925 43.478 0.00 0.00 45.86 2.52
1606 1628 4.527038 AGTGAAACGAGGGAAGTAGAATCA 59.473 41.667 0.00 0.00 45.86 2.57
1643 1669 1.174078 TCACGTTCGTGGGTGCTCTA 61.174 55.000 22.02 0.98 36.82 2.43
1661 1687 4.134563 CTCTAGAGGAGCTTAGTCTGGAC 58.865 52.174 12.27 0.00 35.08 4.02
1662 1688 1.757682 AGAGGAGCTTAGTCTGGACG 58.242 55.000 0.00 0.00 36.20 4.79
1663 1689 0.101579 GAGGAGCTTAGTCTGGACGC 59.898 60.000 0.00 0.00 36.20 5.19
1664 1690 0.323908 AGGAGCTTAGTCTGGACGCT 60.324 55.000 0.00 2.27 36.20 5.07
1665 1691 0.179124 GGAGCTTAGTCTGGACGCTG 60.179 60.000 6.40 0.00 36.20 5.18
1666 1692 0.804156 GAGCTTAGTCTGGACGCTGC 60.804 60.000 6.40 6.57 36.20 5.25
1669 1695 1.608717 CTTAGTCTGGACGCTGCCCT 61.609 60.000 0.00 0.00 36.20 5.19
1671 1697 0.323999 TAGTCTGGACGCTGCCCTTA 60.324 55.000 0.00 0.00 36.20 2.69
1672 1698 0.978146 AGTCTGGACGCTGCCCTTAT 60.978 55.000 0.00 0.00 36.20 1.73
1673 1699 0.811616 GTCTGGACGCTGCCCTTATG 60.812 60.000 0.00 0.00 0.00 1.90
1674 1700 1.221840 CTGGACGCTGCCCTTATGT 59.778 57.895 0.00 0.00 0.00 2.29
1675 1701 0.811616 CTGGACGCTGCCCTTATGTC 60.812 60.000 0.00 0.00 0.00 3.06
1676 1702 1.220749 GGACGCTGCCCTTATGTCA 59.779 57.895 0.00 0.00 0.00 3.58
1677 1703 0.811616 GGACGCTGCCCTTATGTCAG 60.812 60.000 0.00 0.00 0.00 3.51
1678 1704 0.108138 GACGCTGCCCTTATGTCAGT 60.108 55.000 0.00 0.00 0.00 3.41
1679 1705 0.324943 ACGCTGCCCTTATGTCAGTT 59.675 50.000 0.00 0.00 0.00 3.16
1680 1706 0.729116 CGCTGCCCTTATGTCAGTTG 59.271 55.000 0.00 0.00 0.00 3.16
1681 1707 0.453390 GCTGCCCTTATGTCAGTTGC 59.547 55.000 0.00 0.00 0.00 4.17
1682 1708 1.952367 GCTGCCCTTATGTCAGTTGCT 60.952 52.381 0.00 0.00 0.00 3.91
1683 1709 2.680805 GCTGCCCTTATGTCAGTTGCTA 60.681 50.000 0.00 0.00 0.00 3.49
1684 1710 3.201290 CTGCCCTTATGTCAGTTGCTAG 58.799 50.000 0.00 0.00 0.00 3.42
1685 1711 1.943340 GCCCTTATGTCAGTTGCTAGC 59.057 52.381 8.10 8.10 0.00 3.42
1686 1712 2.420687 GCCCTTATGTCAGTTGCTAGCT 60.421 50.000 17.23 0.00 0.00 3.32
1687 1713 3.462021 CCCTTATGTCAGTTGCTAGCTC 58.538 50.000 17.23 9.22 0.00 4.09
1688 1714 3.462021 CCTTATGTCAGTTGCTAGCTCC 58.538 50.000 17.23 6.18 0.00 4.70
1689 1715 3.462021 CTTATGTCAGTTGCTAGCTCCC 58.538 50.000 17.23 3.50 0.00 4.30
1690 1716 0.176680 ATGTCAGTTGCTAGCTCCCG 59.823 55.000 17.23 2.36 0.00 5.14
1691 1717 1.811679 GTCAGTTGCTAGCTCCCGC 60.812 63.158 17.23 1.61 0.00 6.13
1692 1718 2.265739 CAGTTGCTAGCTCCCGCA 59.734 61.111 17.23 0.00 39.10 5.69
1693 1719 1.375908 CAGTTGCTAGCTCCCGCAA 60.376 57.895 17.23 12.32 43.21 4.85
1694 1720 0.745845 CAGTTGCTAGCTCCCGCAAT 60.746 55.000 17.23 7.46 46.42 3.56
1695 1721 0.035056 AGTTGCTAGCTCCCGCAATT 60.035 50.000 17.23 12.37 46.42 2.32
1696 1722 0.811281 GTTGCTAGCTCCCGCAATTT 59.189 50.000 17.23 0.00 46.42 1.82
1697 1723 1.202348 GTTGCTAGCTCCCGCAATTTT 59.798 47.619 17.23 0.00 46.42 1.82
1698 1724 1.544724 TGCTAGCTCCCGCAATTTTT 58.455 45.000 17.23 0.00 39.10 1.94
1735 1761 0.877071 CAACTCGATGCTGCAGGTTT 59.123 50.000 17.12 0.00 0.00 3.27
1741 1767 1.808531 GATGCTGCAGGTTTGTGCCA 61.809 55.000 17.12 2.03 43.28 4.92
1759 1785 2.291043 ACAAGGCCTCCCTGTACCG 61.291 63.158 5.23 0.00 41.90 4.02
1766 1792 1.771565 CCTCCCTGTACCGTGATGTA 58.228 55.000 0.00 0.00 0.00 2.29
1804 1837 1.065854 GCAAGGAGTCCACTACAGCAT 60.066 52.381 12.86 0.00 32.52 3.79
1809 1842 0.532573 AGTCCACTACAGCATGACCG 59.467 55.000 0.00 0.00 39.69 4.79
1816 1849 1.745653 CTACAGCATGACCGACTGAGA 59.254 52.381 0.00 0.00 39.69 3.27
1817 1850 0.529833 ACAGCATGACCGACTGAGAG 59.470 55.000 0.00 0.00 39.69 3.20
1820 1859 0.814457 GCATGACCGACTGAGAGACT 59.186 55.000 0.00 0.00 0.00 3.24
1830 1869 3.847709 GAGAGACTTGCGCGCTGC 61.848 66.667 33.29 17.83 46.70 5.25
1848 1888 2.252260 CGCAGGCTTTTCGGTGTG 59.748 61.111 0.00 0.00 0.00 3.82
1858 1898 2.177394 TTTCGGTGTGAGCTATTGCA 57.823 45.000 1.12 0.00 42.74 4.08
1863 1903 2.615447 CGGTGTGAGCTATTGCATCATT 59.385 45.455 1.12 0.00 42.74 2.57
1866 1906 4.214971 GGTGTGAGCTATTGCATCATTAGG 59.785 45.833 1.12 0.00 42.74 2.69
1936 1976 3.766691 GGTCCTTACCGCGCAGGA 61.767 66.667 22.10 16.50 45.00 3.86
1937 1977 2.263540 GTCCTTACCGCGCAGGAA 59.736 61.111 22.10 6.70 41.05 3.36
1938 1978 1.810030 GTCCTTACCGCGCAGGAAG 60.810 63.158 22.10 16.23 41.05 3.46
1939 1979 3.195698 CCTTACCGCGCAGGAAGC 61.196 66.667 22.10 0.00 45.00 3.86
1940 1980 2.125512 CTTACCGCGCAGGAAGCT 60.126 61.111 22.10 5.11 45.00 3.74
1941 1981 2.434185 TTACCGCGCAGGAAGCTG 60.434 61.111 22.10 0.00 45.00 4.24
2009 2049 7.100458 ACCTTAATGGCATTTGTGATCTTAC 57.900 36.000 19.21 0.00 40.22 2.34
2010 2050 6.183360 ACCTTAATGGCATTTGTGATCTTACG 60.183 38.462 19.21 0.00 40.22 3.18
2015 2055 4.699735 TGGCATTTGTGATCTTACGACATT 59.300 37.500 0.00 0.00 0.00 2.71
2051 2091 3.603158 TGCAGCGAAATAACTCACCTA 57.397 42.857 0.00 0.00 0.00 3.08
2080 2120 1.273606 TGCTAGGTTGTCTCTGTCTGC 59.726 52.381 0.00 0.00 0.00 4.26
2138 2185 2.202743 GCTATCTGCCACGCGTCA 60.203 61.111 9.86 4.21 35.15 4.35
2408 2463 2.744202 AGCAAGGCTTTTGTCGTGATAG 59.256 45.455 0.00 0.00 33.89 2.08
2446 2501 0.338467 TAGCAAGGCCAGGACTAGGA 59.662 55.000 5.01 0.00 0.00 2.94
2544 2599 8.990163 AATTGTTACAGGGTTTCTTCTCTTAA 57.010 30.769 0.00 0.00 0.00 1.85
2976 3037 5.047021 TGAGCAGTTCTAGTCTAGTTGCAAT 60.047 40.000 23.12 12.10 34.05 3.56
3208 3269 3.650281 TGTGGTTGATATGGCATCAGT 57.350 42.857 1.65 0.00 0.00 3.41
3269 3347 3.378112 GCAATTATGGCTGTGTCTGCTTA 59.622 43.478 0.00 0.00 0.00 3.09
3328 3406 0.382158 TGCTATCTCTTGTCGAGCCG 59.618 55.000 0.00 0.00 39.70 5.52
3351 3429 7.792508 GCCGTTAATGATCTAATTTAGTTGTCG 59.207 37.037 3.45 1.74 0.00 4.35
3352 3430 9.027129 CCGTTAATGATCTAATTTAGTTGTCGA 57.973 33.333 3.45 0.00 0.00 4.20
3354 3432 9.851043 GTTAATGATCTAATTTAGTTGTCGAGC 57.149 33.333 3.45 0.00 0.00 5.03
3355 3433 7.484035 AATGATCTAATTTAGTTGTCGAGCC 57.516 36.000 3.45 0.00 0.00 4.70
3356 3434 5.041287 TGATCTAATTTAGTTGTCGAGCCG 58.959 41.667 3.45 0.00 0.00 5.52
3357 3435 4.445452 TCTAATTTAGTTGTCGAGCCGT 57.555 40.909 3.45 0.00 0.00 5.68
3359 3437 5.953183 TCTAATTTAGTTGTCGAGCCGTTA 58.047 37.500 3.45 0.00 0.00 3.18
3430 3784 1.475280 GCTGCAGAAATTGAGGCATCA 59.525 47.619 20.43 0.00 35.45 3.07
3621 4046 5.565259 GCGAGTGATGTTTGTCAGTTTTATG 59.435 40.000 0.00 0.00 32.08 1.90
3625 4050 5.858581 GTGATGTTTGTCAGTTTTATGAGCC 59.141 40.000 0.00 0.00 0.00 4.70
3654 4079 6.455360 TCATTCTTCTGTGCTTTTTCAGTT 57.545 33.333 0.00 0.00 33.89 3.16
3771 4196 6.679327 ATCATCATCGCCATCATCAAATAG 57.321 37.500 0.00 0.00 0.00 1.73
3851 4276 2.444895 GATCCTCAGCCCCGTCCT 60.445 66.667 0.00 0.00 0.00 3.85
3982 4408 3.805207 GATTAACACTAATCCCCGCACT 58.195 45.455 0.00 0.00 38.22 4.40
4028 4456 2.808543 AGTTGATTCGAGTGGCTTTGTC 59.191 45.455 0.00 0.00 0.00 3.18
4101 4530 9.627395 CACTAGTTATGACCTATACTGTAATGC 57.373 37.037 0.00 0.00 0.00 3.56
4454 4884 1.741528 TGCACTGCTGGTATGATGTG 58.258 50.000 1.98 0.00 0.00 3.21
4647 5137 9.913310 TGGATGAGGTGATTGTACAATTATAAA 57.087 29.630 21.63 7.70 0.00 1.40
4702 5192 4.380444 CCAATGGAGTTTGTAATGGAACCG 60.380 45.833 0.00 0.00 0.00 4.44
4733 5223 3.659786 CACACCGATACTGTTCCTCAAA 58.340 45.455 0.00 0.00 0.00 2.69
4799 5289 4.844349 ACATACACTTGGAGGCAGTTAT 57.156 40.909 0.00 0.00 0.00 1.89
4944 5434 6.478344 GCTTTATCACTCTGATGGTCAAGTAG 59.522 42.308 0.00 0.00 37.70 2.57
5013 5503 0.598065 CTGCTTGGGTTTAGGTGCAC 59.402 55.000 8.80 8.80 0.00 4.57
5065 5555 3.149196 CATGTGCTTGGGTCTACAGTTT 58.851 45.455 0.00 0.00 0.00 2.66
5066 5556 2.846193 TGTGCTTGGGTCTACAGTTTC 58.154 47.619 0.00 0.00 0.00 2.78
5067 5557 2.171659 TGTGCTTGGGTCTACAGTTTCA 59.828 45.455 0.00 0.00 0.00 2.69
5068 5558 3.211045 GTGCTTGGGTCTACAGTTTCAA 58.789 45.455 0.00 0.00 0.00 2.69
5069 5559 3.251004 GTGCTTGGGTCTACAGTTTCAAG 59.749 47.826 0.00 0.00 35.90 3.02
5070 5560 3.118038 TGCTTGGGTCTACAGTTTCAAGT 60.118 43.478 0.00 0.00 35.43 3.16
5071 5561 4.101898 TGCTTGGGTCTACAGTTTCAAGTA 59.898 41.667 0.00 0.00 35.43 2.24
5072 5562 4.691216 GCTTGGGTCTACAGTTTCAAGTAG 59.309 45.833 0.00 0.00 39.19 2.57
5073 5563 5.742255 GCTTGGGTCTACAGTTTCAAGTAGT 60.742 44.000 0.00 0.00 38.97 2.73
5074 5564 5.881923 TGGGTCTACAGTTTCAAGTAGTT 57.118 39.130 0.00 0.00 38.97 2.24
5076 5566 6.285990 TGGGTCTACAGTTTCAAGTAGTTTC 58.714 40.000 0.00 0.00 38.97 2.78
5195 5829 7.121168 CCAGATTGGTGTTGATTATGTTGTACT 59.879 37.037 0.00 0.00 31.35 2.73
5196 5830 8.177663 CAGATTGGTGTTGATTATGTTGTACTC 58.822 37.037 0.00 0.00 0.00 2.59
5197 5831 6.811253 TTGGTGTTGATTATGTTGTACTCC 57.189 37.500 0.00 0.00 0.00 3.85
5198 5832 5.250200 TGGTGTTGATTATGTTGTACTCCC 58.750 41.667 0.00 0.00 0.00 4.30
5199 5833 5.013704 TGGTGTTGATTATGTTGTACTCCCT 59.986 40.000 0.00 0.00 0.00 4.20
5200 5834 5.585047 GGTGTTGATTATGTTGTACTCCCTC 59.415 44.000 0.00 0.00 0.00 4.30
5201 5835 5.585047 GTGTTGATTATGTTGTACTCCCTCC 59.415 44.000 0.00 0.00 0.00 4.30
5202 5836 4.665833 TGATTATGTTGTACTCCCTCCG 57.334 45.455 0.00 0.00 0.00 4.63
5203 5837 4.028131 TGATTATGTTGTACTCCCTCCGT 58.972 43.478 0.00 0.00 0.00 4.69
5204 5838 4.468510 TGATTATGTTGTACTCCCTCCGTT 59.531 41.667 0.00 0.00 0.00 4.44
5205 5839 4.460948 TTATGTTGTACTCCCTCCGTTC 57.539 45.455 0.00 0.00 0.00 3.95
5206 5840 0.971386 TGTTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.00 0.00 3.62
5207 5841 0.971386 GTTGTACTCCCTCCGTTCCA 59.029 55.000 0.00 0.00 0.00 3.53
5208 5842 1.345415 GTTGTACTCCCTCCGTTCCAA 59.655 52.381 0.00 0.00 0.00 3.53
5209 5843 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
5210 5844 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
5211 5845 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
5212 5846 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
5213 5847 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
5214 5848 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
5215 5849 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
5216 5850 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
5217 5851 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
5218 5852 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
5219 5853 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
5220 5854 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
5221 5855 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
5222 5856 3.627577 CCGTTCCAAAATAGATGACCCAG 59.372 47.826 0.00 0.00 0.00 4.45
5223 5857 3.065371 CGTTCCAAAATAGATGACCCAGC 59.935 47.826 0.00 0.00 0.00 4.85
5224 5858 4.273318 GTTCCAAAATAGATGACCCAGCT 58.727 43.478 0.00 0.00 33.54 4.24
5225 5859 4.591321 TCCAAAATAGATGACCCAGCTT 57.409 40.909 0.00 0.00 30.76 3.74
5226 5860 4.934356 TCCAAAATAGATGACCCAGCTTT 58.066 39.130 0.00 0.00 30.76 3.51
5227 5861 4.706476 TCCAAAATAGATGACCCAGCTTTG 59.294 41.667 0.00 0.00 30.76 2.77
5228 5862 4.463891 CCAAAATAGATGACCCAGCTTTGT 59.536 41.667 0.00 0.00 30.76 2.83
5229 5863 5.652014 CCAAAATAGATGACCCAGCTTTGTA 59.348 40.000 0.00 0.00 30.76 2.41
5230 5864 6.404734 CCAAAATAGATGACCCAGCTTTGTAC 60.405 42.308 0.00 0.00 30.76 2.90
5231 5865 5.700402 AATAGATGACCCAGCTTTGTACT 57.300 39.130 0.00 0.00 30.76 2.73
5232 5866 6.808321 AATAGATGACCCAGCTTTGTACTA 57.192 37.500 0.00 0.00 30.76 1.82
5233 5867 6.808321 ATAGATGACCCAGCTTTGTACTAA 57.192 37.500 0.00 0.00 30.76 2.24
5234 5868 4.833390 AGATGACCCAGCTTTGTACTAAC 58.167 43.478 0.00 0.00 0.00 2.34
5235 5869 4.532521 AGATGACCCAGCTTTGTACTAACT 59.467 41.667 0.00 0.00 0.00 2.24
5236 5870 4.699925 TGACCCAGCTTTGTACTAACTT 57.300 40.909 0.00 0.00 0.00 2.66
5237 5871 5.043737 TGACCCAGCTTTGTACTAACTTT 57.956 39.130 0.00 0.00 0.00 2.66
5238 5872 6.177310 TGACCCAGCTTTGTACTAACTTTA 57.823 37.500 0.00 0.00 0.00 1.85
5239 5873 6.228258 TGACCCAGCTTTGTACTAACTTTAG 58.772 40.000 0.00 0.00 36.82 1.85
5240 5874 6.183361 TGACCCAGCTTTGTACTAACTTTAGT 60.183 38.462 6.85 6.85 45.39 2.24
5241 5875 7.015487 TGACCCAGCTTTGTACTAACTTTAGTA 59.985 37.037 4.98 4.98 43.36 1.82
5263 5897 6.997655 GTACAAAGTTAGTACTAGGTTGGGT 58.002 40.000 18.73 13.29 38.95 4.51
5264 5898 6.106648 ACAAAGTTAGTACTAGGTTGGGTC 57.893 41.667 18.73 2.16 33.17 4.46
5265 5899 5.603813 ACAAAGTTAGTACTAGGTTGGGTCA 59.396 40.000 18.73 0.00 33.17 4.02
5266 5900 6.271624 ACAAAGTTAGTACTAGGTTGGGTCAT 59.728 38.462 18.73 3.60 33.17 3.06
5267 5901 6.541934 AAGTTAGTACTAGGTTGGGTCATC 57.458 41.667 2.23 0.00 33.17 2.92
5268 5902 5.840081 AGTTAGTACTAGGTTGGGTCATCT 58.160 41.667 2.23 0.00 31.21 2.90
5269 5903 6.978261 AGTTAGTACTAGGTTGGGTCATCTA 58.022 40.000 2.23 0.00 31.21 1.98
5270 5904 7.593653 AGTTAGTACTAGGTTGGGTCATCTAT 58.406 38.462 2.23 0.00 31.21 1.98
5271 5905 8.066247 AGTTAGTACTAGGTTGGGTCATCTATT 58.934 37.037 2.23 0.00 31.21 1.73
5272 5906 8.702819 GTTAGTACTAGGTTGGGTCATCTATTT 58.297 37.037 2.23 0.00 0.00 1.40
5273 5907 7.750947 AGTACTAGGTTGGGTCATCTATTTT 57.249 36.000 0.00 0.00 0.00 1.82
5274 5908 7.565680 AGTACTAGGTTGGGTCATCTATTTTG 58.434 38.462 0.00 0.00 0.00 2.44
5275 5909 5.755849 ACTAGGTTGGGTCATCTATTTTGG 58.244 41.667 0.00 0.00 0.00 3.28
5276 5910 4.946160 AGGTTGGGTCATCTATTTTGGA 57.054 40.909 0.00 0.00 0.00 3.53
5277 5911 5.269554 AGGTTGGGTCATCTATTTTGGAA 57.730 39.130 0.00 0.00 0.00 3.53
5278 5912 5.016831 AGGTTGGGTCATCTATTTTGGAAC 58.983 41.667 0.00 0.00 0.00 3.62
5279 5913 4.142469 GGTTGGGTCATCTATTTTGGAACG 60.142 45.833 0.00 0.00 0.00 3.95
5280 5914 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
5281 5915 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
5282 5916 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
5283 5917 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
5284 5918 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
5285 5919 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
5286 5920 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
5287 5921 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
5288 5922 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
5289 5923 4.778958 TCTATTTTGGAACGGAGGGAGTAA 59.221 41.667 0.00 0.00 0.00 2.24
6326 7038 8.119226 CACTCTTCAGCAACTAAAATAGCATAC 58.881 37.037 0.00 0.00 0.00 2.39
6686 7399 2.048023 CATGCACCACGCCCAGATT 61.048 57.895 0.00 0.00 41.33 2.40
7051 7785 9.151471 CATTACCCAGCTAATATATGTGTACAC 57.849 37.037 19.36 19.36 0.00 2.90
7439 8261 0.240678 TGCACCGCAATGATGTCAAC 59.759 50.000 0.00 0.00 34.76 3.18
7440 8262 0.523072 GCACCGCAATGATGTCAACT 59.477 50.000 0.00 0.00 0.00 3.16
7567 8472 3.139077 GGGTAGTTCATTAGATTGGCCG 58.861 50.000 0.00 0.00 0.00 6.13
7624 8529 7.043656 GCATAACACTAGAAAACAAAACCACAC 60.044 37.037 0.00 0.00 0.00 3.82
7748 8656 5.588648 GCTGGCCAATACTATGTTAAGACAA 59.411 40.000 7.01 0.00 39.66 3.18
7772 8680 7.837202 ATGCTTTCATGTCCAACAATATTTG 57.163 32.000 0.00 0.00 0.00 2.32
7830 8738 4.888326 TGCATAAAACCCAAATGAGCTT 57.112 36.364 0.00 0.00 0.00 3.74
7832 8740 4.040217 TGCATAAAACCCAAATGAGCTTGT 59.960 37.500 0.00 0.00 0.00 3.16
7856 8764 7.013750 TGTTTTATGTTGGAATTGTGCTGACTA 59.986 33.333 0.00 0.00 0.00 2.59
7872 8780 5.012251 TGCTGACTACCAAAATACTGTACCA 59.988 40.000 0.00 0.00 0.00 3.25
7925 8833 5.413833 CCTGTATATGCTCATGGATGGTTTC 59.586 44.000 0.00 0.00 0.00 2.78
8276 9184 4.452733 GGCAGACCCCGGAAGTCG 62.453 72.222 16.09 12.76 39.31 4.18
8281 9189 0.394080 AGACCCCGGAAGTCGTAGAG 60.394 60.000 16.09 0.00 39.31 2.43
8317 9227 1.159285 TGCTGAAATCAGGTCAAGCG 58.841 50.000 12.09 0.00 43.94 4.68
8437 9347 6.048732 TCTTGTGATTGTGAGCCTGTAATA 57.951 37.500 0.00 0.00 0.00 0.98
8471 9381 5.065988 GCAACCGTATTATTCATTGGTGACT 59.934 40.000 0.00 0.00 33.11 3.41
8472 9382 6.715464 CAACCGTATTATTCATTGGTGACTC 58.285 40.000 0.00 0.00 33.11 3.36
8498 9408 6.426633 TGAGTGAAATTTTCTGCTCAATCGTA 59.573 34.615 22.47 8.68 38.45 3.43
8499 9409 6.603095 AGTGAAATTTTCTGCTCAATCGTAC 58.397 36.000 10.33 0.00 0.00 3.67
8632 9542 2.852449 TGAGCCAACCTAATGGAATCCT 59.148 45.455 0.00 0.00 43.54 3.24
8634 9544 2.582636 AGCCAACCTAATGGAATCCTGT 59.417 45.455 0.00 0.00 43.54 4.00
8675 9585 3.265601 GGGCTGGAATGGGCCTAT 58.734 61.111 4.53 0.00 46.80 2.57
8676 9586 1.228675 GGGCTGGAATGGGCCTATG 60.229 63.158 0.67 0.00 46.80 2.23
8678 9588 1.719063 GGCTGGAATGGGCCTATGGA 61.719 60.000 0.67 0.00 44.48 3.41
8679 9589 0.251077 GCTGGAATGGGCCTATGGAG 60.251 60.000 0.67 0.00 0.00 3.86
8681 9591 1.350351 CTGGAATGGGCCTATGGAGAG 59.650 57.143 0.67 0.00 0.00 3.20
8682 9592 0.695347 GGAATGGGCCTATGGAGAGG 59.305 60.000 0.67 0.00 39.88 3.69
8683 9593 1.734655 GAATGGGCCTATGGAGAGGA 58.265 55.000 0.67 0.00 39.15 3.71
8684 9594 1.349357 GAATGGGCCTATGGAGAGGAC 59.651 57.143 0.67 0.00 45.00 3.85
8687 9597 2.916355 GGCCTATGGAGAGGACACA 58.084 57.895 0.00 0.00 45.09 3.72
8688 9598 0.755686 GGCCTATGGAGAGGACACAG 59.244 60.000 0.00 0.00 45.09 3.66
8689 9599 0.105778 GCCTATGGAGAGGACACAGC 59.894 60.000 0.00 0.00 39.15 4.40
8690 9600 1.489481 CCTATGGAGAGGACACAGCA 58.511 55.000 0.00 0.00 39.15 4.41
8691 9601 1.411977 CCTATGGAGAGGACACAGCAG 59.588 57.143 0.00 0.00 39.15 4.24
8692 9602 1.411977 CTATGGAGAGGACACAGCAGG 59.588 57.143 0.00 0.00 0.00 4.85
8693 9603 1.908340 ATGGAGAGGACACAGCAGGC 61.908 60.000 0.00 0.00 0.00 4.85
8694 9604 2.289532 GGAGAGGACACAGCAGGCT 61.290 63.158 0.00 0.00 0.00 4.58
8695 9605 1.676384 GAGAGGACACAGCAGGCTT 59.324 57.895 0.00 0.00 0.00 4.35
8696 9606 0.673022 GAGAGGACACAGCAGGCTTG 60.673 60.000 0.00 0.00 0.00 4.01
8697 9607 1.072159 GAGGACACAGCAGGCTTGT 59.928 57.895 0.00 8.23 0.00 3.16
8698 9608 0.536006 GAGGACACAGCAGGCTTGTT 60.536 55.000 0.00 0.00 0.00 2.83
8699 9609 0.820891 AGGACACAGCAGGCTTGTTG 60.821 55.000 11.16 11.16 40.89 3.33
8700 9610 1.008079 GACACAGCAGGCTTGTTGC 60.008 57.895 12.62 3.95 38.92 4.17
8709 9619 2.813901 GCTTGTTGCCCAGCACAA 59.186 55.556 0.00 0.00 38.71 3.33
8710 9620 1.300388 GCTTGTTGCCCAGCACAAG 60.300 57.895 18.92 18.92 43.42 3.16
8711 9621 1.300388 CTTGTTGCCCAGCACAAGC 60.300 57.895 14.42 0.00 39.08 4.01
8769 9717 1.492764 TTGGTATCCGTTCCCTCCTC 58.507 55.000 0.00 0.00 0.00 3.71
8777 9725 1.313812 CGTTCCCTCCTCGTACTGCT 61.314 60.000 0.00 0.00 0.00 4.24
8785 9733 2.873472 CTCCTCGTACTGCTACTGTAGG 59.127 54.545 16.09 3.56 0.00 3.18
8786 9734 2.502947 TCCTCGTACTGCTACTGTAGGA 59.497 50.000 16.09 12.52 33.86 2.94
8788 9736 2.286872 TCGTACTGCTACTGTAGGAGC 58.713 52.381 29.12 16.68 46.81 4.70
8789 9737 2.014857 CGTACTGCTACTGTAGGAGCA 58.985 52.381 29.12 18.36 46.81 4.26
8833 9781 5.181245 CGTACATGTTCTTCAAATCCACCTT 59.819 40.000 2.30 0.00 0.00 3.50
8862 9810 6.764877 ATACTTACACGTTCACAAGAGTTG 57.235 37.500 0.00 0.00 0.00 3.16
8878 9826 7.011389 CACAAGAGTTGTCTTTGAATGTACTCA 59.989 37.037 0.00 0.00 41.40 3.41
8880 9828 7.664082 AGAGTTGTCTTTGAATGTACTCATG 57.336 36.000 0.00 0.00 34.48 3.07
8881 9829 6.652481 AGAGTTGTCTTTGAATGTACTCATGG 59.348 38.462 0.00 0.00 34.48 3.66
8884 9832 5.620206 TGTCTTTGAATGTACTCATGGTGT 58.380 37.500 0.00 0.00 34.19 4.16
8885 9833 6.764379 TGTCTTTGAATGTACTCATGGTGTA 58.236 36.000 0.00 0.00 34.19 2.90
8936 9891 6.696441 AGAATAGTTTACTGGTACCTCTCG 57.304 41.667 14.36 1.60 0.00 4.04
8938 9893 1.471684 AGTTTACTGGTACCTCTCGCG 59.528 52.381 14.36 0.00 0.00 5.87
8940 9895 2.048444 TTACTGGTACCTCTCGCGAT 57.952 50.000 10.36 0.00 0.00 4.58
8941 9896 2.048444 TACTGGTACCTCTCGCGATT 57.952 50.000 10.36 0.00 0.00 3.34
8943 9898 1.135083 ACTGGTACCTCTCGCGATTTG 60.135 52.381 10.36 2.97 0.00 2.32
8944 9899 0.174845 TGGTACCTCTCGCGATTTGG 59.825 55.000 10.36 14.70 0.00 3.28
8945 9900 0.458669 GGTACCTCTCGCGATTTGGA 59.541 55.000 22.90 11.47 0.00 3.53
8946 9901 1.134907 GGTACCTCTCGCGATTTGGAA 60.135 52.381 22.90 1.85 0.00 3.53
8947 9902 2.613691 GTACCTCTCGCGATTTGGAAA 58.386 47.619 22.90 11.42 0.00 3.13
8948 9903 2.178912 ACCTCTCGCGATTTGGAAAA 57.821 45.000 22.90 0.00 0.00 2.29
8949 9904 2.076863 ACCTCTCGCGATTTGGAAAAG 58.923 47.619 22.90 4.76 0.00 2.27
8950 9905 2.289444 ACCTCTCGCGATTTGGAAAAGA 60.289 45.455 22.90 8.56 0.00 2.52
8951 9906 2.742053 CCTCTCGCGATTTGGAAAAGAA 59.258 45.455 10.36 0.00 0.00 2.52
8952 9907 3.188460 CCTCTCGCGATTTGGAAAAGAAA 59.812 43.478 10.36 0.00 0.00 2.52
8953 9908 4.320202 CCTCTCGCGATTTGGAAAAGAAAA 60.320 41.667 10.36 0.00 0.00 2.29
8954 9909 4.783242 TCTCGCGATTTGGAAAAGAAAAG 58.217 39.130 10.36 0.00 0.00 2.27
8955 9910 4.513692 TCTCGCGATTTGGAAAAGAAAAGA 59.486 37.500 10.36 0.00 0.00 2.52
8956 9911 5.008217 TCTCGCGATTTGGAAAAGAAAAGAA 59.992 36.000 10.36 0.00 0.00 2.52
8957 9912 5.583495 TCGCGATTTGGAAAAGAAAAGAAA 58.417 33.333 3.71 0.00 0.00 2.52
8958 9913 6.037098 TCGCGATTTGGAAAAGAAAAGAAAA 58.963 32.000 3.71 0.00 0.00 2.29
8959 9914 6.198216 TCGCGATTTGGAAAAGAAAAGAAAAG 59.802 34.615 3.71 0.00 0.00 2.27
8960 9915 6.198216 CGCGATTTGGAAAAGAAAAGAAAAGA 59.802 34.615 0.00 0.00 0.00 2.52
8961 9916 7.253950 CGCGATTTGGAAAAGAAAAGAAAAGAA 60.254 33.333 0.00 0.00 0.00 2.52
8962 9917 8.387354 GCGATTTGGAAAAGAAAAGAAAAGAAA 58.613 29.630 0.00 0.00 0.00 2.52
8994 9949 6.672593 TGAATTGCCCCTGATAAATAGAGTT 58.327 36.000 0.00 0.00 0.00 3.01
9000 9955 6.126507 TGCCCCTGATAAATAGAGTTGATGAA 60.127 38.462 0.00 0.00 0.00 2.57
9001 9956 6.772716 GCCCCTGATAAATAGAGTTGATGAAA 59.227 38.462 0.00 0.00 0.00 2.69
9002 9957 7.449704 GCCCCTGATAAATAGAGTTGATGAAAT 59.550 37.037 0.00 0.00 0.00 2.17
9003 9958 9.007901 CCCCTGATAAATAGAGTTGATGAAATC 57.992 37.037 0.00 0.00 45.83 2.17
9030 9985 0.386100 CAGTCGGGAGCATACGATCG 60.386 60.000 14.88 14.88 41.53 3.69
9031 9986 1.081376 GTCGGGAGCATACGATCGG 60.081 63.158 20.98 2.45 41.53 4.18
9137 10093 1.444119 AAACACGACGGCACTTGCAT 61.444 50.000 3.15 0.00 44.36 3.96
9140 10096 1.134936 ACACGACGGCACTTGCATATA 60.135 47.619 3.15 0.00 44.36 0.86
9243 10211 4.383861 CTCCCACTGCAGCAGCGA 62.384 66.667 23.05 13.93 46.23 4.93
9244 10212 4.687215 TCCCACTGCAGCAGCGAC 62.687 66.667 23.05 0.00 46.23 5.19
9247 10215 4.068282 CACTGCAGCAGCGACGTG 62.068 66.667 23.05 9.81 46.23 4.49
9252 10220 2.566529 CAGCAGCGACGTGGAGTA 59.433 61.111 0.11 0.00 0.00 2.59
9253 10221 1.515088 CAGCAGCGACGTGGAGTAG 60.515 63.158 0.11 0.00 0.00 2.57
9257 10225 3.768632 GCGACGTGGAGTAGCTTG 58.231 61.111 0.11 0.00 46.07 4.01
9258 10226 1.805945 GCGACGTGGAGTAGCTTGG 60.806 63.158 0.11 0.00 46.07 3.61
9259 10227 1.585006 CGACGTGGAGTAGCTTGGT 59.415 57.895 0.00 0.00 0.00 3.67
9260 10228 0.732880 CGACGTGGAGTAGCTTGGTG 60.733 60.000 0.00 0.00 0.00 4.17
9261 10229 0.389948 GACGTGGAGTAGCTTGGTGG 60.390 60.000 0.00 0.00 0.00 4.61
9262 10230 1.119574 ACGTGGAGTAGCTTGGTGGT 61.120 55.000 0.00 0.00 0.00 4.16
9263 10231 0.892755 CGTGGAGTAGCTTGGTGGTA 59.107 55.000 0.00 0.00 0.00 3.25
9264 10232 1.135083 CGTGGAGTAGCTTGGTGGTAG 60.135 57.143 0.00 0.00 0.00 3.18
9265 10233 0.902531 TGGAGTAGCTTGGTGGTAGC 59.097 55.000 0.00 0.00 38.93 3.58
9266 10234 0.902531 GGAGTAGCTTGGTGGTAGCA 59.097 55.000 0.00 0.00 41.11 3.49
9267 10235 1.134670 GGAGTAGCTTGGTGGTAGCAG 60.135 57.143 0.00 0.00 41.11 4.24
9268 10236 0.250513 AGTAGCTTGGTGGTAGCAGC 59.749 55.000 16.91 16.91 41.11 5.25
9269 10237 1.084370 GTAGCTTGGTGGTAGCAGCG 61.084 60.000 18.30 7.08 41.11 5.18
9270 10238 2.238847 TAGCTTGGTGGTAGCAGCGG 62.239 60.000 18.30 14.26 41.11 5.52
9271 10239 3.127533 CTTGGTGGTAGCAGCGGC 61.128 66.667 18.30 0.00 41.61 6.53
9272 10240 3.899981 CTTGGTGGTAGCAGCGGCA 62.900 63.158 18.30 5.16 44.61 5.69
9273 10241 3.266686 TTGGTGGTAGCAGCGGCAT 62.267 57.895 18.30 0.00 44.61 4.40
9274 10242 3.204827 GGTGGTAGCAGCGGCATG 61.205 66.667 12.44 0.00 44.61 4.06
9275 10243 2.436646 GTGGTAGCAGCGGCATGT 60.437 61.111 12.44 0.00 44.61 3.21
9276 10244 2.436469 TGGTAGCAGCGGCATGTG 60.436 61.111 12.44 0.00 44.61 3.21
9277 10245 3.204827 GGTAGCAGCGGCATGTGG 61.205 66.667 12.44 0.00 44.61 4.17
9278 10246 3.204827 GTAGCAGCGGCATGTGGG 61.205 66.667 12.44 0.00 44.61 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.548056 AGTCCTAGATTTCTTTCTTGTGGGA 59.452 40.000 0.00 0.00 0.00 4.37
4 5 5.810095 AGTCCTAGATTTCTTTCTTGTGGG 58.190 41.667 0.00 0.00 0.00 4.61
5 6 8.260818 TGATAGTCCTAGATTTCTTTCTTGTGG 58.739 37.037 0.00 0.00 0.00 4.17
6 7 9.311916 CTGATAGTCCTAGATTTCTTTCTTGTG 57.688 37.037 0.00 0.00 0.00 3.33
7 8 9.261035 TCTGATAGTCCTAGATTTCTTTCTTGT 57.739 33.333 0.00 0.00 0.00 3.16
15 16 8.983724 CGGAATTTTCTGATAGTCCTAGATTTC 58.016 37.037 0.00 0.00 35.56 2.17
16 17 7.934120 CCGGAATTTTCTGATAGTCCTAGATTT 59.066 37.037 0.00 0.00 35.56 2.17
17 18 7.290248 TCCGGAATTTTCTGATAGTCCTAGATT 59.710 37.037 0.00 0.00 35.56 2.40
18 19 6.782988 TCCGGAATTTTCTGATAGTCCTAGAT 59.217 38.462 0.00 0.00 35.56 1.98
19 20 6.134055 TCCGGAATTTTCTGATAGTCCTAGA 58.866 40.000 0.00 0.00 35.56 2.43
20 21 6.406692 TCCGGAATTTTCTGATAGTCCTAG 57.593 41.667 0.00 0.00 35.56 3.02
21 22 6.407752 GGTTCCGGAATTTTCTGATAGTCCTA 60.408 42.308 22.04 0.00 35.56 2.94
22 23 5.429130 GTTCCGGAATTTTCTGATAGTCCT 58.571 41.667 22.04 0.00 35.56 3.85
23 24 4.575236 GGTTCCGGAATTTTCTGATAGTCC 59.425 45.833 22.04 8.04 35.56 3.85
24 25 5.183228 TGGTTCCGGAATTTTCTGATAGTC 58.817 41.667 22.04 1.87 35.56 2.59
25 26 5.174037 TGGTTCCGGAATTTTCTGATAGT 57.826 39.130 22.04 0.00 35.56 2.12
26 27 5.050091 CGATGGTTCCGGAATTTTCTGATAG 60.050 44.000 22.04 1.20 35.56 2.08
27 28 4.814234 CGATGGTTCCGGAATTTTCTGATA 59.186 41.667 22.04 0.00 35.56 2.15
28 29 3.627577 CGATGGTTCCGGAATTTTCTGAT 59.372 43.478 22.04 4.83 35.56 2.90
29 30 3.006940 CGATGGTTCCGGAATTTTCTGA 58.993 45.455 22.04 0.00 35.56 3.27
30 31 2.477863 GCGATGGTTCCGGAATTTTCTG 60.478 50.000 22.04 10.25 0.00 3.02
31 32 1.743394 GCGATGGTTCCGGAATTTTCT 59.257 47.619 22.04 3.76 0.00 2.52
32 33 1.743394 AGCGATGGTTCCGGAATTTTC 59.257 47.619 22.04 15.38 0.00 2.29
33 34 1.472480 CAGCGATGGTTCCGGAATTTT 59.528 47.619 22.04 7.83 0.00 1.82
34 35 1.094785 CAGCGATGGTTCCGGAATTT 58.905 50.000 22.04 8.22 0.00 1.82
35 36 1.376609 GCAGCGATGGTTCCGGAATT 61.377 55.000 22.04 8.62 0.00 2.17
36 37 1.819632 GCAGCGATGGTTCCGGAAT 60.820 57.895 22.04 3.87 0.00 3.01
37 38 2.435938 GCAGCGATGGTTCCGGAA 60.436 61.111 14.35 14.35 0.00 4.30
38 39 2.923426 GATGCAGCGATGGTTCCGGA 62.923 60.000 0.00 0.00 0.00 5.14
39 40 2.514592 ATGCAGCGATGGTTCCGG 60.515 61.111 1.46 0.00 0.00 5.14
40 41 2.874694 CGATGCAGCGATGGTTCCG 61.875 63.158 21.79 0.00 0.00 4.30
41 42 2.537560 CCGATGCAGCGATGGTTCC 61.538 63.158 28.29 0.00 0.00 3.62
42 43 1.521457 TCCGATGCAGCGATGGTTC 60.521 57.895 28.29 0.00 0.00 3.62
43 44 1.815421 GTCCGATGCAGCGATGGTT 60.815 57.895 28.29 0.00 0.00 3.67
44 45 2.202932 GTCCGATGCAGCGATGGT 60.203 61.111 28.29 0.00 0.00 3.55
45 46 2.202919 TGTCCGATGCAGCGATGG 60.203 61.111 28.29 9.61 0.00 3.51
46 47 2.242572 CCTGTCCGATGCAGCGATG 61.243 63.158 28.29 10.45 32.93 3.84
47 48 2.107750 CCTGTCCGATGCAGCGAT 59.892 61.111 28.29 0.00 32.93 4.58
48 49 4.147449 CCCTGTCCGATGCAGCGA 62.147 66.667 28.29 9.32 32.93 4.93
49 50 3.451556 ATCCCTGTCCGATGCAGCG 62.452 63.158 19.16 19.16 32.93 5.18
50 51 1.596477 GATCCCTGTCCGATGCAGC 60.596 63.158 0.00 0.00 32.93 5.25
51 52 0.249784 CTGATCCCTGTCCGATGCAG 60.250 60.000 0.00 0.00 0.00 4.41
52 53 1.689243 CCTGATCCCTGTCCGATGCA 61.689 60.000 0.00 0.00 0.00 3.96
53 54 1.070445 CCTGATCCCTGTCCGATGC 59.930 63.158 0.00 0.00 0.00 3.91
54 55 0.105593 CACCTGATCCCTGTCCGATG 59.894 60.000 0.00 0.00 0.00 3.84
55 56 0.032117 TCACCTGATCCCTGTCCGAT 60.032 55.000 0.00 0.00 0.00 4.18
56 57 0.970937 GTCACCTGATCCCTGTCCGA 60.971 60.000 0.00 0.00 0.00 4.55
57 58 1.257750 TGTCACCTGATCCCTGTCCG 61.258 60.000 0.00 0.00 0.00 4.79
58 59 1.134280 CATGTCACCTGATCCCTGTCC 60.134 57.143 0.00 0.00 0.00 4.02
59 60 1.745141 GCATGTCACCTGATCCCTGTC 60.745 57.143 0.00 0.00 0.00 3.51
60 61 0.254178 GCATGTCACCTGATCCCTGT 59.746 55.000 0.00 0.00 0.00 4.00
61 62 0.253894 TGCATGTCACCTGATCCCTG 59.746 55.000 0.00 0.00 0.00 4.45
62 63 0.254178 GTGCATGTCACCTGATCCCT 59.746 55.000 8.54 0.00 39.79 4.20
63 64 2.785868 GTGCATGTCACCTGATCCC 58.214 57.895 8.54 0.00 39.79 3.85
79 80 0.040157 CACGGTGACATGCAAAGGTG 60.040 55.000 0.74 0.00 0.00 4.00
80 81 0.465460 ACACGGTGACATGCAAAGGT 60.465 50.000 16.29 0.00 0.00 3.50
81 82 0.040157 CACACGGTGACATGCAAAGG 60.040 55.000 16.29 0.00 35.23 3.11
82 83 0.943673 TCACACGGTGACATGCAAAG 59.056 50.000 16.29 0.00 37.67 2.77
83 84 3.086733 TCACACGGTGACATGCAAA 57.913 47.368 16.29 0.00 37.67 3.68
84 85 4.865865 TCACACGGTGACATGCAA 57.134 50.000 16.29 0.00 37.67 4.08
91 92 1.590525 GTCGCAAGTCACACGGTGA 60.591 57.895 16.29 0.00 40.50 4.02
92 93 2.594962 GGTCGCAAGTCACACGGTG 61.595 63.158 6.58 6.58 39.48 4.94
93 94 2.279918 GGTCGCAAGTCACACGGT 60.280 61.111 0.00 0.00 39.48 4.83
94 95 3.041940 GGGTCGCAAGTCACACGG 61.042 66.667 0.00 0.00 39.48 4.94
95 96 1.433053 TTTGGGTCGCAAGTCACACG 61.433 55.000 2.29 0.00 38.86 4.49
96 97 0.951558 ATTTGGGTCGCAAGTCACAC 59.048 50.000 2.29 0.00 38.86 3.82
97 98 1.606668 GAATTTGGGTCGCAAGTCACA 59.393 47.619 2.29 0.00 36.91 3.58
98 99 1.606668 TGAATTTGGGTCGCAAGTCAC 59.393 47.619 11.68 5.27 39.48 3.67
99 100 1.974265 TGAATTTGGGTCGCAAGTCA 58.026 45.000 11.68 11.68 39.48 3.41
100 101 3.363341 TTTGAATTTGGGTCGCAAGTC 57.637 42.857 2.29 5.64 39.48 3.01
101 102 4.335400 AATTTGAATTTGGGTCGCAAGT 57.665 36.364 2.29 0.00 39.48 3.16
102 103 6.777526 TTAAATTTGAATTTGGGTCGCAAG 57.222 33.333 11.02 0.00 38.90 4.01
103 104 6.538742 TGTTTAAATTTGAATTTGGGTCGCAA 59.461 30.769 11.02 0.00 38.90 4.85
104 105 6.049149 TGTTTAAATTTGAATTTGGGTCGCA 58.951 32.000 11.02 0.00 38.90 5.10
105 106 6.532365 TGTTTAAATTTGAATTTGGGTCGC 57.468 33.333 11.02 0.00 38.90 5.19
108 109 9.765795 TCGTAATGTTTAAATTTGAATTTGGGT 57.234 25.926 11.02 0.00 38.90 4.51
146 147 5.816258 TGTGTTGTGAACATGCATGATTTTT 59.184 32.000 32.75 16.45 44.35 1.94
147 148 5.358090 TGTGTTGTGAACATGCATGATTTT 58.642 33.333 32.75 16.83 44.35 1.82
148 149 4.946445 TGTGTTGTGAACATGCATGATTT 58.054 34.783 32.75 17.59 44.35 2.17
149 150 4.587584 TGTGTTGTGAACATGCATGATT 57.412 36.364 32.75 21.39 44.35 2.57
150 151 4.794278 ATGTGTTGTGAACATGCATGAT 57.206 36.364 32.75 22.02 44.35 2.45
151 152 5.900865 ATATGTGTTGTGAACATGCATGA 57.099 34.783 32.75 8.19 44.35 3.07
152 153 7.969508 TCTTAATATGTGTTGTGAACATGCATG 59.030 33.333 25.09 25.09 44.35 4.06
153 154 8.054152 TCTTAATATGTGTTGTGAACATGCAT 57.946 30.769 0.00 0.00 44.35 3.96
154 155 7.446001 TCTTAATATGTGTTGTGAACATGCA 57.554 32.000 0.00 0.00 44.35 3.96
200 201 9.801714 GCTTCTTGATGTATGTTTTGAATTTTG 57.198 29.630 0.00 0.00 0.00 2.44
201 202 9.545105 TGCTTCTTGATGTATGTTTTGAATTTT 57.455 25.926 0.00 0.00 0.00 1.82
202 203 9.545105 TTGCTTCTTGATGTATGTTTTGAATTT 57.455 25.926 0.00 0.00 0.00 1.82
203 204 9.545105 TTTGCTTCTTGATGTATGTTTTGAATT 57.455 25.926 0.00 0.00 0.00 2.17
204 205 9.545105 TTTTGCTTCTTGATGTATGTTTTGAAT 57.455 25.926 0.00 0.00 0.00 2.57
205 206 8.939201 TTTTGCTTCTTGATGTATGTTTTGAA 57.061 26.923 0.00 0.00 0.00 2.69
206 207 8.939201 TTTTTGCTTCTTGATGTATGTTTTGA 57.061 26.923 0.00 0.00 0.00 2.69
228 229 9.566432 ACTATTCACATCTGAGTTTCTCTTTTT 57.434 29.630 0.00 0.00 0.00 1.94
237 238 9.634021 TCTCTGTATACTATTCACATCTGAGTT 57.366 33.333 4.17 0.00 0.00 3.01
238 239 9.634021 TTCTCTGTATACTATTCACATCTGAGT 57.366 33.333 4.17 0.00 0.00 3.41
239 240 9.891828 GTTCTCTGTATACTATTCACATCTGAG 57.108 37.037 4.17 0.00 0.00 3.35
240 241 8.851145 GGTTCTCTGTATACTATTCACATCTGA 58.149 37.037 4.17 0.00 0.00 3.27
241 242 8.633561 TGGTTCTCTGTATACTATTCACATCTG 58.366 37.037 4.17 0.00 0.00 2.90
242 243 8.768501 TGGTTCTCTGTATACTATTCACATCT 57.231 34.615 4.17 0.00 0.00 2.90
243 244 9.988815 AATGGTTCTCTGTATACTATTCACATC 57.011 33.333 4.17 0.00 0.00 3.06
244 245 9.988815 GAATGGTTCTCTGTATACTATTCACAT 57.011 33.333 4.17 0.00 38.71 3.21
245 246 8.135529 CGAATGGTTCTCTGTATACTATTCACA 58.864 37.037 4.17 0.00 38.75 3.58
246 247 7.115095 GCGAATGGTTCTCTGTATACTATTCAC 59.885 40.741 4.17 0.00 38.75 3.18
247 248 7.145985 GCGAATGGTTCTCTGTATACTATTCA 58.854 38.462 4.17 0.00 38.75 2.57
248 249 7.145985 TGCGAATGGTTCTCTGTATACTATTC 58.854 38.462 4.17 0.00 36.80 1.75
249 250 7.050970 TGCGAATGGTTCTCTGTATACTATT 57.949 36.000 4.17 0.00 0.00 1.73
250 251 6.650427 TGCGAATGGTTCTCTGTATACTAT 57.350 37.500 4.17 0.00 0.00 2.12
251 252 6.096423 AGTTGCGAATGGTTCTCTGTATACTA 59.904 38.462 4.17 0.00 0.00 1.82
252 253 5.105310 AGTTGCGAATGGTTCTCTGTATACT 60.105 40.000 4.17 0.00 0.00 2.12
253 254 5.109903 AGTTGCGAATGGTTCTCTGTATAC 58.890 41.667 0.00 0.00 0.00 1.47
254 255 5.339008 AGTTGCGAATGGTTCTCTGTATA 57.661 39.130 0.00 0.00 0.00 1.47
255 256 4.207891 AGTTGCGAATGGTTCTCTGTAT 57.792 40.909 0.00 0.00 0.00 2.29
256 257 3.678056 AGTTGCGAATGGTTCTCTGTA 57.322 42.857 0.00 0.00 0.00 2.74
257 258 2.550830 AGTTGCGAATGGTTCTCTGT 57.449 45.000 0.00 0.00 0.00 3.41
258 259 4.631377 TGAATAGTTGCGAATGGTTCTCTG 59.369 41.667 0.00 0.00 0.00 3.35
259 260 4.832248 TGAATAGTTGCGAATGGTTCTCT 58.168 39.130 0.00 0.00 0.00 3.10
260 261 5.294306 TCATGAATAGTTGCGAATGGTTCTC 59.706 40.000 0.00 0.00 0.00 2.87
261 262 5.065218 GTCATGAATAGTTGCGAATGGTTCT 59.935 40.000 0.00 0.00 0.00 3.01
262 263 5.163764 TGTCATGAATAGTTGCGAATGGTTC 60.164 40.000 0.00 0.00 0.00 3.62
263 264 4.699735 TGTCATGAATAGTTGCGAATGGTT 59.300 37.500 0.00 0.00 0.00 3.67
264 265 4.260985 TGTCATGAATAGTTGCGAATGGT 58.739 39.130 0.00 0.00 0.00 3.55
265 266 4.571984 TCTGTCATGAATAGTTGCGAATGG 59.428 41.667 0.00 0.00 0.00 3.16
266 267 5.723492 TCTGTCATGAATAGTTGCGAATG 57.277 39.130 0.00 0.00 0.00 2.67
267 268 6.932356 AATCTGTCATGAATAGTTGCGAAT 57.068 33.333 0.00 0.00 0.00 3.34
268 269 6.595326 AGAAATCTGTCATGAATAGTTGCGAA 59.405 34.615 0.00 0.00 0.00 4.70
269 270 6.108687 AGAAATCTGTCATGAATAGTTGCGA 58.891 36.000 0.00 0.00 0.00 5.10
270 271 6.257411 AGAGAAATCTGTCATGAATAGTTGCG 59.743 38.462 0.00 0.00 0.00 4.85
271 272 7.551035 AGAGAAATCTGTCATGAATAGTTGC 57.449 36.000 0.00 0.00 0.00 4.17
296 297 7.421599 TCGAAACATACATCAAGAAGCAAAAA 58.578 30.769 0.00 0.00 0.00 1.94
297 298 6.964908 TCGAAACATACATCAAGAAGCAAAA 58.035 32.000 0.00 0.00 0.00 2.44
298 299 6.552859 TCGAAACATACATCAAGAAGCAAA 57.447 33.333 0.00 0.00 0.00 3.68
299 300 6.552859 TTCGAAACATACATCAAGAAGCAA 57.447 33.333 0.00 0.00 0.00 3.91
300 301 6.741992 ATTCGAAACATACATCAAGAAGCA 57.258 33.333 0.00 0.00 0.00 3.91
301 302 8.368126 CAAAATTCGAAACATACATCAAGAAGC 58.632 33.333 0.00 0.00 0.00 3.86
302 303 9.611284 TCAAAATTCGAAACATACATCAAGAAG 57.389 29.630 0.00 0.00 0.00 2.85
304 305 9.773328 GATCAAAATTCGAAACATACATCAAGA 57.227 29.630 0.00 0.00 0.00 3.02
305 306 9.778993 AGATCAAAATTCGAAACATACATCAAG 57.221 29.630 0.00 0.00 0.00 3.02
306 307 9.558648 CAGATCAAAATTCGAAACATACATCAA 57.441 29.630 0.00 0.00 0.00 2.57
307 308 8.945057 TCAGATCAAAATTCGAAACATACATCA 58.055 29.630 0.00 0.00 0.00 3.07
308 309 9.773328 TTCAGATCAAAATTCGAAACATACATC 57.227 29.630 0.00 0.31 0.00 3.06
341 342 9.277783 GTCACAGCACATATTAAGATAATTCCT 57.722 33.333 0.00 0.00 0.00 3.36
342 343 8.507249 GGTCACAGCACATATTAAGATAATTCC 58.493 37.037 0.00 0.00 0.00 3.01
343 344 9.056005 TGGTCACAGCACATATTAAGATAATTC 57.944 33.333 0.00 0.00 0.00 2.17
344 345 8.978874 TGGTCACAGCACATATTAAGATAATT 57.021 30.769 0.00 0.00 0.00 1.40
345 346 9.006839 CATGGTCACAGCACATATTAAGATAAT 57.993 33.333 0.00 0.00 0.00 1.28
346 347 7.041167 GCATGGTCACAGCACATATTAAGATAA 60.041 37.037 0.00 0.00 0.00 1.75
347 348 6.427853 GCATGGTCACAGCACATATTAAGATA 59.572 38.462 0.00 0.00 0.00 1.98
348 349 5.240183 GCATGGTCACAGCACATATTAAGAT 59.760 40.000 0.00 0.00 0.00 2.40
349 350 4.576053 GCATGGTCACAGCACATATTAAGA 59.424 41.667 0.00 0.00 0.00 2.10
350 351 4.336153 TGCATGGTCACAGCACATATTAAG 59.664 41.667 0.00 0.00 32.55 1.85
351 352 4.268359 TGCATGGTCACAGCACATATTAA 58.732 39.130 0.00 0.00 32.55 1.40
352 353 3.883669 TGCATGGTCACAGCACATATTA 58.116 40.909 0.00 0.00 32.55 0.98
353 354 2.725637 TGCATGGTCACAGCACATATT 58.274 42.857 0.00 0.00 32.55 1.28
354 355 2.423446 TGCATGGTCACAGCACATAT 57.577 45.000 0.00 0.00 32.55 1.78
355 356 2.018515 CATGCATGGTCACAGCACATA 58.981 47.619 19.40 0.00 41.60 2.29
356 357 0.815095 CATGCATGGTCACAGCACAT 59.185 50.000 19.40 0.00 41.60 3.21
357 358 0.250814 TCATGCATGGTCACAGCACA 60.251 50.000 25.97 0.00 41.60 4.57
358 359 1.100510 ATCATGCATGGTCACAGCAC 58.899 50.000 25.97 0.00 41.60 4.40
359 360 1.842052 AATCATGCATGGTCACAGCA 58.158 45.000 25.97 4.85 43.14 4.41
360 361 2.953466 AAATCATGCATGGTCACAGC 57.047 45.000 25.97 0.00 0.00 4.40
391 392 9.443283 CCAAATTCAAATTTAAACATTGCGAAA 57.557 25.926 9.60 0.00 36.52 3.46
392 393 8.072567 CCCAAATTCAAATTTAAACATTGCGAA 58.927 29.630 9.60 2.95 36.52 4.70
393 394 7.227512 ACCCAAATTCAAATTTAAACATTGCGA 59.772 29.630 9.60 3.66 36.52 5.10
394 395 7.358830 ACCCAAATTCAAATTTAAACATTGCG 58.641 30.769 9.60 0.00 36.52 4.85
395 396 7.533561 CGACCCAAATTCAAATTTAAACATTGC 59.466 33.333 9.60 0.00 36.52 3.56
396 397 7.533561 GCGACCCAAATTCAAATTTAAACATTG 59.466 33.333 8.56 8.56 36.52 2.82
397 398 7.227512 TGCGACCCAAATTCAAATTTAAACATT 59.772 29.630 0.63 0.00 36.52 2.71
398 399 6.708054 TGCGACCCAAATTCAAATTTAAACAT 59.292 30.769 0.63 0.00 36.52 2.71
399 400 6.049149 TGCGACCCAAATTCAAATTTAAACA 58.951 32.000 0.63 0.00 36.52 2.83
400 401 6.532365 TGCGACCCAAATTCAAATTTAAAC 57.468 33.333 0.63 0.00 36.52 2.01
401 402 6.763610 ACTTGCGACCCAAATTCAAATTTAAA 59.236 30.769 0.63 0.00 36.52 1.52
402 403 6.284459 ACTTGCGACCCAAATTCAAATTTAA 58.716 32.000 0.63 0.00 36.52 1.52
403 404 5.848406 ACTTGCGACCCAAATTCAAATTTA 58.152 33.333 0.63 0.00 36.52 1.40
404 405 4.702831 ACTTGCGACCCAAATTCAAATTT 58.297 34.783 0.00 0.00 39.07 1.82
405 406 4.202202 TGACTTGCGACCCAAATTCAAATT 60.202 37.500 0.00 0.00 31.94 1.82
406 407 3.320541 TGACTTGCGACCCAAATTCAAAT 59.679 39.130 0.00 0.00 31.94 2.32
407 408 2.690497 TGACTTGCGACCCAAATTCAAA 59.310 40.909 0.00 0.00 31.94 2.69
408 409 2.034053 GTGACTTGCGACCCAAATTCAA 59.966 45.455 0.00 0.00 31.09 2.69
409 410 1.606668 GTGACTTGCGACCCAAATTCA 59.393 47.619 0.00 0.00 31.94 2.57
410 411 1.606668 TGTGACTTGCGACCCAAATTC 59.393 47.619 0.00 0.00 31.94 2.17
411 412 1.336755 GTGTGACTTGCGACCCAAATT 59.663 47.619 0.00 0.00 31.94 1.82
412 413 0.951558 GTGTGACTTGCGACCCAAAT 59.048 50.000 0.00 0.00 31.94 2.32
413 414 1.433053 CGTGTGACTTGCGACCCAAA 61.433 55.000 0.00 0.00 31.94 3.28
414 415 1.885388 CGTGTGACTTGCGACCCAA 60.885 57.895 0.00 0.00 0.00 4.12
415 416 2.279851 CGTGTGACTTGCGACCCA 60.280 61.111 0.00 0.00 0.00 4.51
416 417 3.041940 CCGTGTGACTTGCGACCC 61.042 66.667 0.00 0.00 0.00 4.46
417 418 2.279918 ACCGTGTGACTTGCGACC 60.280 61.111 0.00 0.00 0.00 4.79
418 419 1.590525 TCACCGTGTGACTTGCGAC 60.591 57.895 0.00 0.00 37.67 5.19
419 420 2.809010 TCACCGTGTGACTTGCGA 59.191 55.556 0.00 0.00 37.67 5.10
426 427 0.943673 CTTTGCATGTCACCGTGTGA 59.056 50.000 0.00 3.02 40.50 3.58
427 428 0.040157 CCTTTGCATGTCACCGTGTG 60.040 55.000 0.00 0.00 34.45 3.82
428 429 0.465460 ACCTTTGCATGTCACCGTGT 60.465 50.000 0.00 0.00 0.00 4.49
429 430 0.040157 CACCTTTGCATGTCACCGTG 60.040 55.000 0.00 0.00 0.00 4.94
430 431 2.330254 CACCTTTGCATGTCACCGT 58.670 52.632 0.00 0.00 0.00 4.83
446 447 0.254178 AGGGATCTGGTGACATGCAC 59.746 55.000 10.63 10.63 46.98 4.57
447 448 0.253894 CAGGGATCTGGTGACATGCA 59.746 55.000 0.00 0.00 41.51 3.96
448 449 0.254178 ACAGGGATCTGGTGACATGC 59.746 55.000 0.00 0.00 44.99 4.06
449 450 1.134280 GGACAGGGATCTGGTGACATG 60.134 57.143 0.00 0.00 44.99 3.21
450 451 1.207791 GGACAGGGATCTGGTGACAT 58.792 55.000 0.00 0.00 44.99 3.06
451 452 0.909610 GGGACAGGGATCTGGTGACA 60.910 60.000 0.00 0.00 44.99 3.58
452 453 1.908483 GGGACAGGGATCTGGTGAC 59.092 63.158 0.00 0.00 44.99 3.67
453 454 1.685765 CGGGACAGGGATCTGGTGA 60.686 63.158 0.00 0.00 44.99 4.02
454 455 2.903357 CGGGACAGGGATCTGGTG 59.097 66.667 0.00 0.00 44.99 4.17
455 456 3.083997 GCGGGACAGGGATCTGGT 61.084 66.667 0.00 0.00 44.99 4.00
456 457 2.765807 AGCGGGACAGGGATCTGG 60.766 66.667 0.00 0.00 44.99 3.86
457 458 2.503061 CAGCGGGACAGGGATCTG 59.497 66.667 0.00 0.00 46.10 2.90
458 459 3.474570 GCAGCGGGACAGGGATCT 61.475 66.667 0.00 0.00 0.00 2.75
459 460 3.112205 ATGCAGCGGGACAGGGATC 62.112 63.158 0.00 0.00 0.00 3.36
460 461 3.092511 ATGCAGCGGGACAGGGAT 61.093 61.111 0.00 0.00 0.00 3.85
461 462 3.785859 GATGCAGCGGGACAGGGA 61.786 66.667 0.00 0.00 0.00 4.20
462 463 4.100084 TGATGCAGCGGGACAGGG 62.100 66.667 0.00 0.00 0.00 4.45
463 464 2.821366 GTGATGCAGCGGGACAGG 60.821 66.667 0.00 0.00 0.00 4.00
464 465 2.046988 TGTGATGCAGCGGGACAG 60.047 61.111 0.00 0.00 0.00 3.51
465 466 2.358615 GTGTGATGCAGCGGGACA 60.359 61.111 0.00 0.00 0.00 4.02
466 467 3.127533 GGTGTGATGCAGCGGGAC 61.128 66.667 0.00 0.00 35.77 4.46
595 596 1.899534 TTTCCTTTTCGGTGGGGCG 60.900 57.895 0.00 0.00 0.00 6.13
656 657 1.966451 GGTCGTGGTTTCTGGCAGG 60.966 63.158 15.73 0.00 0.00 4.85
659 660 0.030235 GTTTGGTCGTGGTTTCTGGC 59.970 55.000 0.00 0.00 0.00 4.85
663 664 1.104630 TTGGGTTTGGTCGTGGTTTC 58.895 50.000 0.00 0.00 0.00 2.78
730 731 4.250431 GTGCGCGGTTGCTTGTGT 62.250 61.111 8.83 0.00 39.65 3.72
910 922 4.321515 AAAAGGGCAGGCAGGGGG 62.322 66.667 0.00 0.00 0.00 5.40
911 923 2.681421 GAAAAGGGCAGGCAGGGG 60.681 66.667 0.00 0.00 0.00 4.79
912 924 2.681421 GGAAAAGGGCAGGCAGGG 60.681 66.667 0.00 0.00 0.00 4.45
913 925 3.064324 CGGAAAAGGGCAGGCAGG 61.064 66.667 0.00 0.00 0.00 4.85
914 926 3.752339 GCGGAAAAGGGCAGGCAG 61.752 66.667 0.00 0.00 0.00 4.85
1504 1526 5.511377 CACCCGATTACATTCGAAACATTTG 59.489 40.000 0.00 0.00 41.62 2.32
1516 1538 4.800914 GCAGCTCTAATCACCCGATTACAT 60.801 45.833 0.00 0.00 42.06 2.29
1518 1540 3.060602 GCAGCTCTAATCACCCGATTAC 58.939 50.000 0.00 0.00 42.06 1.89
1520 1542 1.539065 CGCAGCTCTAATCACCCGATT 60.539 52.381 0.00 0.00 44.24 3.34
1521 1543 0.032678 CGCAGCTCTAATCACCCGAT 59.967 55.000 0.00 0.00 0.00 4.18
1522 1544 1.437573 CGCAGCTCTAATCACCCGA 59.562 57.895 0.00 0.00 0.00 5.14
1523 1545 4.018609 CGCAGCTCTAATCACCCG 57.981 61.111 0.00 0.00 0.00 5.28
1545 1567 3.927142 GTCACTAATTCCCTCACTTCACG 59.073 47.826 0.00 0.00 0.00 4.35
1547 1569 3.056107 CGGTCACTAATTCCCTCACTTCA 60.056 47.826 0.00 0.00 0.00 3.02
1551 1573 1.653151 GCGGTCACTAATTCCCTCAC 58.347 55.000 0.00 0.00 0.00 3.51
1552 1574 0.174845 CGCGGTCACTAATTCCCTCA 59.825 55.000 0.00 0.00 0.00 3.86
1575 1597 2.704065 TCCCTCGTTTCACTCCTTCTTT 59.296 45.455 0.00 0.00 0.00 2.52
1576 1598 2.326428 TCCCTCGTTTCACTCCTTCTT 58.674 47.619 0.00 0.00 0.00 2.52
1581 1603 2.824341 TCTACTTCCCTCGTTTCACTCC 59.176 50.000 0.00 0.00 0.00 3.85
1582 1604 4.516365 TTCTACTTCCCTCGTTTCACTC 57.484 45.455 0.00 0.00 0.00 3.51
1584 1606 4.817517 TGATTCTACTTCCCTCGTTTCAC 58.182 43.478 0.00 0.00 0.00 3.18
1585 1607 4.527038 ACTGATTCTACTTCCCTCGTTTCA 59.473 41.667 0.00 0.00 0.00 2.69
1588 1610 4.345854 AGACTGATTCTACTTCCCTCGTT 58.654 43.478 0.00 0.00 30.17 3.85
1590 1612 5.127491 ACTAGACTGATTCTACTTCCCTCG 58.873 45.833 0.00 0.00 35.55 4.63
1603 1625 6.349445 CGTGAAACCAGTAGAACTAGACTGAT 60.349 42.308 10.15 0.00 44.88 2.90
1605 1627 5.154932 CGTGAAACCAGTAGAACTAGACTG 58.845 45.833 0.00 0.00 42.29 3.51
1606 1628 4.826183 ACGTGAAACCAGTAGAACTAGACT 59.174 41.667 0.00 0.00 0.00 3.24
1643 1669 1.757682 CGTCCAGACTAAGCTCCTCT 58.242 55.000 0.00 0.00 0.00 3.69
1650 1676 1.153549 GGGCAGCGTCCAGACTAAG 60.154 63.158 0.00 0.00 0.00 2.18
1654 1680 0.811616 CATAAGGGCAGCGTCCAGAC 60.812 60.000 2.18 0.00 0.00 3.51
1655 1681 1.264749 ACATAAGGGCAGCGTCCAGA 61.265 55.000 2.18 0.00 0.00 3.86
1661 1687 0.729116 CAACTGACATAAGGGCAGCG 59.271 55.000 0.00 0.00 33.03 5.18
1662 1688 0.453390 GCAACTGACATAAGGGCAGC 59.547 55.000 0.00 0.00 33.03 5.25
1663 1689 2.119801 AGCAACTGACATAAGGGCAG 57.880 50.000 0.00 0.00 35.81 4.85
1664 1690 2.680805 GCTAGCAACTGACATAAGGGCA 60.681 50.000 10.63 0.00 0.00 5.36
1665 1691 1.943340 GCTAGCAACTGACATAAGGGC 59.057 52.381 10.63 0.00 0.00 5.19
1666 1692 3.462021 GAGCTAGCAACTGACATAAGGG 58.538 50.000 18.83 0.00 0.00 3.95
1669 1695 2.159099 CGGGAGCTAGCAACTGACATAA 60.159 50.000 18.83 0.00 0.00 1.90
1671 1697 0.176680 CGGGAGCTAGCAACTGACAT 59.823 55.000 18.83 0.00 0.00 3.06
1672 1698 1.591703 CGGGAGCTAGCAACTGACA 59.408 57.895 18.83 0.00 0.00 3.58
1673 1699 4.504132 CGGGAGCTAGCAACTGAC 57.496 61.111 18.83 0.00 0.00 3.51
1719 1745 0.167470 CACAAACCTGCAGCATCGAG 59.833 55.000 8.66 0.00 0.00 4.04
1741 1767 2.291043 CGGTACAGGGAGGCCTTGT 61.291 63.158 6.77 10.70 45.71 3.16
1786 1819 2.234908 GTCATGCTGTAGTGGACTCCTT 59.765 50.000 0.00 0.00 0.00 3.36
1804 1837 0.598562 GCAAGTCTCTCAGTCGGTCA 59.401 55.000 0.00 0.00 0.00 4.02
1809 1842 2.440569 GCGCGCAAGTCTCTCAGTC 61.441 63.158 29.10 0.00 41.68 3.51
1843 1883 4.214971 CCTAATGATGCAATAGCTCACACC 59.785 45.833 0.00 0.00 42.74 4.16
1848 1888 5.120830 CCGTTACCTAATGATGCAATAGCTC 59.879 44.000 0.00 0.00 42.74 4.09
1858 1898 1.865865 CGCTGCCGTTACCTAATGAT 58.134 50.000 0.00 0.00 0.00 2.45
1919 1959 3.305177 TTCCTGCGCGGTAAGGACC 62.305 63.158 16.49 0.00 42.35 4.46
1922 1962 3.195698 GCTTCCTGCGCGGTAAGG 61.196 66.667 21.37 13.88 34.65 2.69
2009 2049 2.190161 CATGCAATTCAGGCAATGTCG 58.810 47.619 0.00 0.00 45.60 4.35
2010 2050 3.241067 ACATGCAATTCAGGCAATGTC 57.759 42.857 0.00 0.00 45.60 3.06
2015 2055 3.518381 GCAACATGCAATTCAGGCA 57.482 47.368 0.00 0.00 44.26 4.75
2051 2091 4.042187 AGAGACAACCTAGCAAATTCAGGT 59.958 41.667 0.00 0.00 44.66 4.00
2080 2120 9.759473 AGAATGGGAATAAATATGGAGGTTATG 57.241 33.333 0.00 0.00 0.00 1.90
2138 2185 1.064166 CAGGCTGTGGAATCAGGGAAT 60.064 52.381 6.28 0.00 36.12 3.01
2408 2463 1.312815 AGACAAGAGTGGCTGTTTGC 58.687 50.000 0.00 0.00 43.62 3.68
2446 2501 1.127343 GGTTCTCAGGCTAGCATCCT 58.873 55.000 18.24 0.99 0.00 3.24
2544 2599 5.125356 TGACAGAAGACAAACATGTCATGT 58.875 37.500 12.87 12.87 43.81 3.21
2596 2651 3.279434 GGTCCCCAAGTATGTAAAGCTG 58.721 50.000 0.00 0.00 0.00 4.24
2976 3037 4.568169 GGCAACCTTTACCACCTATAACCA 60.568 45.833 0.00 0.00 0.00 3.67
3269 3347 9.635520 CAAGAAAACAAATATCAAGCATTCTCT 57.364 29.630 0.00 0.00 0.00 3.10
3328 3406 9.851043 GCTCGACAACTAAATTAGATCATTAAC 57.149 33.333 7.06 0.00 0.00 2.01
3351 3429 1.601166 ACCAAAAGGTGTAACGGCTC 58.399 50.000 0.00 0.00 38.12 4.70
3352 3430 1.951602 GAACCAAAAGGTGTAACGGCT 59.048 47.619 0.00 0.00 38.12 5.52
3353 3431 1.951602 AGAACCAAAAGGTGTAACGGC 59.048 47.619 0.00 0.00 38.12 5.68
3354 3432 4.575645 TGTAAGAACCAAAAGGTGTAACGG 59.424 41.667 0.00 0.00 38.12 4.44
3355 3433 5.295045 AGTGTAAGAACCAAAAGGTGTAACG 59.705 40.000 0.00 0.00 38.12 3.18
3356 3434 6.688637 AGTGTAAGAACCAAAAGGTGTAAC 57.311 37.500 0.00 0.00 0.00 2.50
3357 3435 7.496591 CAGTAGTGTAAGAACCAAAAGGTGTAA 59.503 37.037 0.00 0.00 0.00 2.41
3359 3437 5.820947 CAGTAGTGTAAGAACCAAAAGGTGT 59.179 40.000 0.00 0.00 0.00 4.16
3621 4046 2.808543 ACAGAAGAATGAAACACGGCTC 59.191 45.455 0.00 0.00 0.00 4.70
3625 4050 3.885484 AGCACAGAAGAATGAAACACG 57.115 42.857 0.00 0.00 0.00 4.49
3757 4182 7.315142 TCAAAACAGAACTATTTGATGATGGC 58.685 34.615 9.37 0.00 37.95 4.40
3771 4196 6.986118 GCAATAGCATGAATCAAAACAGAAC 58.014 36.000 0.00 0.00 41.58 3.01
4028 4456 8.818141 ATGATGGATAAAGAACATACGTGTAG 57.182 34.615 0.00 0.00 37.67 2.74
4101 4530 6.659242 AGGAACTTGGAACAACATATGTTAGG 59.341 38.462 20.39 11.95 45.84 2.69
4454 4884 3.731136 TGTGCGTCACAGAAAGCC 58.269 55.556 8.32 0.00 39.62 4.35
4647 5137 7.667557 CCATTTTCCTGAGATGCATCAATAAT 58.332 34.615 27.81 7.31 0.00 1.28
4648 5138 6.461927 GCCATTTTCCTGAGATGCATCAATAA 60.462 38.462 27.81 11.74 0.00 1.40
4650 5140 4.202223 GCCATTTTCCTGAGATGCATCAAT 60.202 41.667 27.81 13.84 0.00 2.57
4651 5141 3.131577 GCCATTTTCCTGAGATGCATCAA 59.868 43.478 27.81 14.78 0.00 2.57
4702 5192 0.175760 TATCGGTGTGCAGAAGGCTC 59.824 55.000 0.00 0.00 45.15 4.70
4733 5223 6.069673 TCCTGGTACAATGATATTTGACAGGT 60.070 38.462 18.54 3.93 41.53 4.00
4799 5289 8.468756 TGGAACAAACAACCTGCTAAAGCAAA 62.469 38.462 6.08 0.00 44.16 3.68
4944 5434 7.440523 ACATGTCTTCCATACTTCAGAAAAC 57.559 36.000 0.00 0.00 30.71 2.43
5013 5503 6.872628 AGGTTGATGCATGTCACATTATAG 57.127 37.500 2.46 0.00 0.00 1.31
5065 5555 5.992217 GGCAGAAGAAGAAGAAACTACTTGA 59.008 40.000 0.00 0.00 0.00 3.02
5066 5556 5.760253 TGGCAGAAGAAGAAGAAACTACTTG 59.240 40.000 0.00 0.00 0.00 3.16
5067 5557 5.930135 TGGCAGAAGAAGAAGAAACTACTT 58.070 37.500 0.00 0.00 0.00 2.24
5068 5558 5.071115 ACTGGCAGAAGAAGAAGAAACTACT 59.929 40.000 23.66 0.00 0.00 2.57
5069 5559 5.301555 ACTGGCAGAAGAAGAAGAAACTAC 58.698 41.667 23.66 0.00 0.00 2.73
5070 5560 5.552870 ACTGGCAGAAGAAGAAGAAACTA 57.447 39.130 23.66 0.00 0.00 2.24
5071 5561 4.429854 ACTGGCAGAAGAAGAAGAAACT 57.570 40.909 23.66 0.00 0.00 2.66
5072 5562 5.992217 TCTAACTGGCAGAAGAAGAAGAAAC 59.008 40.000 23.66 0.00 0.00 2.78
5073 5563 6.174720 TCTAACTGGCAGAAGAAGAAGAAA 57.825 37.500 23.66 0.00 0.00 2.52
5074 5564 5.808366 TCTAACTGGCAGAAGAAGAAGAA 57.192 39.130 23.66 0.00 0.00 2.52
5076 5566 5.728471 TCATCTAACTGGCAGAAGAAGAAG 58.272 41.667 23.66 13.68 0.00 2.85
5195 5829 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
5196 5830 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
5197 5831 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
5198 5832 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
5199 5833 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
5200 5834 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
5201 5835 3.065371 GCTGGGTCATCTATTTTGGAACG 59.935 47.826 0.00 0.00 0.00 3.95
5202 5836 4.273318 AGCTGGGTCATCTATTTTGGAAC 58.727 43.478 0.00 0.00 0.00 3.62
5203 5837 4.591321 AGCTGGGTCATCTATTTTGGAA 57.409 40.909 0.00 0.00 0.00 3.53
5204 5838 4.591321 AAGCTGGGTCATCTATTTTGGA 57.409 40.909 0.00 0.00 0.00 3.53
5205 5839 4.463891 ACAAAGCTGGGTCATCTATTTTGG 59.536 41.667 0.00 0.00 0.00 3.28
5206 5840 5.649782 ACAAAGCTGGGTCATCTATTTTG 57.350 39.130 0.00 0.00 0.00 2.44
5207 5841 6.485171 AGTACAAAGCTGGGTCATCTATTTT 58.515 36.000 0.00 0.00 0.00 1.82
5208 5842 6.067217 AGTACAAAGCTGGGTCATCTATTT 57.933 37.500 0.00 0.00 0.00 1.40
5209 5843 5.700402 AGTACAAAGCTGGGTCATCTATT 57.300 39.130 0.00 0.00 0.00 1.73
5210 5844 6.384305 AGTTAGTACAAAGCTGGGTCATCTAT 59.616 38.462 0.00 0.00 0.00 1.98
5211 5845 5.720041 AGTTAGTACAAAGCTGGGTCATCTA 59.280 40.000 0.00 0.00 0.00 1.98
5212 5846 4.532521 AGTTAGTACAAAGCTGGGTCATCT 59.467 41.667 0.00 0.00 0.00 2.90
5213 5847 4.833390 AGTTAGTACAAAGCTGGGTCATC 58.167 43.478 0.00 0.00 0.00 2.92
5214 5848 4.910458 AGTTAGTACAAAGCTGGGTCAT 57.090 40.909 0.00 0.00 0.00 3.06
5215 5849 4.699925 AAGTTAGTACAAAGCTGGGTCA 57.300 40.909 0.00 0.00 0.00 4.02
5216 5850 6.228995 ACTAAAGTTAGTACAAAGCTGGGTC 58.771 40.000 1.81 0.00 41.92 4.46
5217 5851 6.183810 ACTAAAGTTAGTACAAAGCTGGGT 57.816 37.500 1.81 0.00 41.92 4.51
5236 5870 8.806146 CCCAACCTAGTACTAACTTTGTACTAA 58.194 37.037 18.13 7.85 46.38 2.24
5237 5871 7.950124 ACCCAACCTAGTACTAACTTTGTACTA 59.050 37.037 17.15 17.15 45.86 1.82
5239 5873 6.997655 ACCCAACCTAGTACTAACTTTGTAC 58.002 40.000 3.76 5.63 40.19 2.90
5240 5874 6.782000 TGACCCAACCTAGTACTAACTTTGTA 59.218 38.462 3.76 0.00 37.15 2.41
5241 5875 5.603813 TGACCCAACCTAGTACTAACTTTGT 59.396 40.000 3.76 0.00 37.15 2.83
5242 5876 6.105397 TGACCCAACCTAGTACTAACTTTG 57.895 41.667 3.76 7.30 37.15 2.77
5243 5877 6.729569 AGATGACCCAACCTAGTACTAACTTT 59.270 38.462 3.76 0.00 37.15 2.66
5244 5878 6.262207 AGATGACCCAACCTAGTACTAACTT 58.738 40.000 3.76 0.00 37.15 2.66
5245 5879 5.840081 AGATGACCCAACCTAGTACTAACT 58.160 41.667 3.76 0.00 39.91 2.24
5246 5880 7.836479 ATAGATGACCCAACCTAGTACTAAC 57.164 40.000 3.76 0.00 0.00 2.34
5247 5881 8.849543 AAATAGATGACCCAACCTAGTACTAA 57.150 34.615 3.76 0.00 0.00 2.24
5248 5882 8.701895 CAAAATAGATGACCCAACCTAGTACTA 58.298 37.037 1.89 1.89 0.00 1.82
5249 5883 7.365652 CCAAAATAGATGACCCAACCTAGTACT 60.366 40.741 0.00 0.00 0.00 2.73
5250 5884 6.766467 CCAAAATAGATGACCCAACCTAGTAC 59.234 42.308 0.00 0.00 0.00 2.73
5251 5885 6.674861 TCCAAAATAGATGACCCAACCTAGTA 59.325 38.462 0.00 0.00 0.00 1.82
5252 5886 5.491078 TCCAAAATAGATGACCCAACCTAGT 59.509 40.000 0.00 0.00 0.00 2.57
5253 5887 6.001449 TCCAAAATAGATGACCCAACCTAG 57.999 41.667 0.00 0.00 0.00 3.02
5254 5888 6.184789 GTTCCAAAATAGATGACCCAACCTA 58.815 40.000 0.00 0.00 0.00 3.08
5255 5889 4.946160 TCCAAAATAGATGACCCAACCT 57.054 40.909 0.00 0.00 0.00 3.50
5256 5890 4.142469 CGTTCCAAAATAGATGACCCAACC 60.142 45.833 0.00 0.00 0.00 3.77
5257 5891 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
5258 5892 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
5259 5893 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
5260 5894 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
5261 5895 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
5262 5896 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
5263 5897 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
5264 5898 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
5265 5899 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
5266 5900 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
5267 5901 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
5268 5902 4.286549 TGTTACTCCCTCCGTTCCAAAATA 59.713 41.667 0.00 0.00 0.00 1.40
5269 5903 3.073356 TGTTACTCCCTCCGTTCCAAAAT 59.927 43.478 0.00 0.00 0.00 1.82
5270 5904 2.438763 TGTTACTCCCTCCGTTCCAAAA 59.561 45.455 0.00 0.00 0.00 2.44
5271 5905 2.048601 TGTTACTCCCTCCGTTCCAAA 58.951 47.619 0.00 0.00 0.00 3.28
5272 5906 1.719529 TGTTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
5273 5907 1.946984 ATGTTACTCCCTCCGTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
5274 5908 3.345508 AAATGTTACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
5275 5909 7.224167 CAGTTATAAATGTTACTCCCTCCGTTC 59.776 40.741 4.75 0.00 0.00 3.95
5276 5910 7.046033 CAGTTATAAATGTTACTCCCTCCGTT 58.954 38.462 4.75 0.00 0.00 4.44
5277 5911 6.381994 TCAGTTATAAATGTTACTCCCTCCGT 59.618 38.462 12.28 0.00 0.00 4.69
5278 5912 6.812998 TCAGTTATAAATGTTACTCCCTCCG 58.187 40.000 12.28 0.00 0.00 4.63
5279 5913 8.890718 GTTTCAGTTATAAATGTTACTCCCTCC 58.109 37.037 12.28 0.00 0.00 4.30
5280 5914 9.444600 TGTTTCAGTTATAAATGTTACTCCCTC 57.555 33.333 12.28 0.00 0.00 4.30
5281 5915 9.975218 ATGTTTCAGTTATAAATGTTACTCCCT 57.025 29.630 12.28 0.00 0.00 4.20
6326 7038 7.285629 TGACTGTTCACCTGGATCTATTACTAG 59.714 40.741 0.00 0.00 0.00 2.57
6945 7670 7.324935 TCACTACAACTACAAGAAACAGACAA 58.675 34.615 0.00 0.00 0.00 3.18
7000 7734 7.987458 TGAAAGGATACATATTCTGAGGTTGAC 59.013 37.037 0.00 0.00 41.41 3.18
7051 7785 3.547468 CCAGCTGAGACAAAAACAAAACG 59.453 43.478 17.39 0.00 0.00 3.60
7439 8261 5.991933 TTCTATATCCCAAGAGCTGCTAG 57.008 43.478 0.15 0.00 0.00 3.42
7440 8262 6.270927 ACAATTCTATATCCCAAGAGCTGCTA 59.729 38.462 0.15 0.00 0.00 3.49
7567 8472 2.689471 TGGCATTTGTGCTCCATATCAC 59.311 45.455 0.07 0.00 34.73 3.06
7624 8529 2.203401 CAACCAAGCAACAACCACATG 58.797 47.619 0.00 0.00 0.00 3.21
7638 8543 5.360999 TGTTGTCAAACATCATACCAACCAA 59.639 36.000 0.00 0.00 41.41 3.67
7748 8656 7.388437 ACAAATATTGTTGGACATGAAAGCAT 58.612 30.769 0.00 0.00 42.22 3.79
7830 8738 5.982516 GTCAGCACAATTCCAACATAAAACA 59.017 36.000 0.00 0.00 0.00 2.83
7832 8740 6.403866 AGTCAGCACAATTCCAACATAAAA 57.596 33.333 0.00 0.00 0.00 1.52
7925 8833 4.948608 TTCTACTGCAGAGAAGAGTACG 57.051 45.455 23.35 0.00 33.83 3.67
8437 9347 5.682943 ATAATACGGTTGCGCATGTTAAT 57.317 34.783 12.75 0.00 0.00 1.40
8471 9381 6.347969 CGATTGAGCAGAAAATTTCACTCAGA 60.348 38.462 21.91 16.42 42.33 3.27
8472 9382 5.793952 CGATTGAGCAGAAAATTTCACTCAG 59.206 40.000 21.91 12.93 42.33 3.35
8569 9479 7.930217 TGTTTCTTCTCAGACAAAAGTTATGG 58.070 34.615 0.00 0.00 0.00 2.74
8632 9542 0.758734 CTTCTGTCAGGACCACCACA 59.241 55.000 0.00 0.00 38.94 4.17
8634 9544 1.053835 TGCTTCTGTCAGGACCACCA 61.054 55.000 0.00 0.00 38.94 4.17
8675 9585 2.587247 GCCTGCTGTGTCCTCTCCA 61.587 63.158 0.00 0.00 0.00 3.86
8676 9586 1.835927 AAGCCTGCTGTGTCCTCTCC 61.836 60.000 0.00 0.00 0.00 3.71
8678 9588 1.374190 CAAGCCTGCTGTGTCCTCT 59.626 57.895 0.00 0.00 0.00 3.69
8679 9589 0.536006 AACAAGCCTGCTGTGTCCTC 60.536 55.000 0.00 0.00 0.00 3.71
8681 9591 1.656441 CAACAAGCCTGCTGTGTCC 59.344 57.895 0.00 0.00 0.00 4.02
8682 9592 1.008079 GCAACAAGCCTGCTGTGTC 60.008 57.895 0.00 0.00 36.84 3.67
8683 9593 3.122850 GCAACAAGCCTGCTGTGT 58.877 55.556 0.00 0.00 36.84 3.72
8692 9602 1.300388 CTTGTGCTGGGCAACAAGC 60.300 57.895 15.66 2.21 41.47 4.01
8693 9603 1.300388 GCTTGTGCTGGGCAACAAG 60.300 57.895 19.81 19.81 43.42 3.16
8694 9604 2.813901 GCTTGTGCTGGGCAACAA 59.186 55.556 0.00 1.46 41.47 2.83
8704 9614 4.176271 GGGTGAATGAATAAAGCTTGTGC 58.824 43.478 0.00 0.00 40.05 4.57
8705 9615 5.047802 ACTGGGTGAATGAATAAAGCTTGTG 60.048 40.000 0.00 0.00 0.00 3.33
8706 9616 5.079643 ACTGGGTGAATGAATAAAGCTTGT 58.920 37.500 0.00 0.00 0.00 3.16
8707 9617 5.649782 ACTGGGTGAATGAATAAAGCTTG 57.350 39.130 0.00 0.00 0.00 4.01
8708 9618 6.245408 TGTACTGGGTGAATGAATAAAGCTT 58.755 36.000 0.00 0.00 0.00 3.74
8709 9619 5.815581 TGTACTGGGTGAATGAATAAAGCT 58.184 37.500 0.00 0.00 0.00 3.74
8710 9620 6.511767 CGATGTACTGGGTGAATGAATAAAGC 60.512 42.308 0.00 0.00 0.00 3.51
8711 9621 6.761242 TCGATGTACTGGGTGAATGAATAAAG 59.239 38.462 0.00 0.00 0.00 1.85
8712 9622 6.645306 TCGATGTACTGGGTGAATGAATAAA 58.355 36.000 0.00 0.00 0.00 1.40
8713 9623 6.228616 TCGATGTACTGGGTGAATGAATAA 57.771 37.500 0.00 0.00 0.00 1.40
8714 9624 5.862678 TCGATGTACTGGGTGAATGAATA 57.137 39.130 0.00 0.00 0.00 1.75
8715 9625 4.753516 TCGATGTACTGGGTGAATGAAT 57.246 40.909 0.00 0.00 0.00 2.57
8718 9628 4.000325 TGTTTCGATGTACTGGGTGAATG 59.000 43.478 0.00 0.00 0.00 2.67
8757 9705 1.807886 CAGTACGAGGAGGGAACGG 59.192 63.158 0.00 0.00 0.00 4.44
8762 9710 1.025812 CAGTAGCAGTACGAGGAGGG 58.974 60.000 0.00 0.00 33.97 4.30
8769 9717 2.014857 TGCTCCTACAGTAGCAGTACG 58.985 52.381 1.50 0.00 43.56 3.67
8777 9725 2.228059 GCGGACTATGCTCCTACAGTA 58.772 52.381 0.00 0.00 0.00 2.74
8785 9733 2.280457 GGCCTGCGGACTATGCTC 60.280 66.667 0.00 0.00 0.00 4.26
8786 9734 3.083349 TGGCCTGCGGACTATGCT 61.083 61.111 3.32 0.00 0.00 3.79
8787 9735 2.590007 CTGGCCTGCGGACTATGC 60.590 66.667 3.32 0.00 0.00 3.14
8788 9736 1.522355 CACTGGCCTGCGGACTATG 60.522 63.158 9.95 0.00 0.00 2.23
8789 9737 0.686441 TACACTGGCCTGCGGACTAT 60.686 55.000 9.95 0.00 0.00 2.12
8790 9738 1.304630 TACACTGGCCTGCGGACTA 60.305 57.895 9.95 0.00 0.00 2.59
8791 9739 2.603473 TACACTGGCCTGCGGACT 60.603 61.111 9.95 0.00 0.00 3.85
8792 9740 2.434359 GTACACTGGCCTGCGGAC 60.434 66.667 9.95 3.01 0.00 4.79
8793 9741 4.063967 CGTACACTGGCCTGCGGA 62.064 66.667 9.95 0.00 0.00 5.54
8794 9742 2.997075 TACGTACACTGGCCTGCGG 61.997 63.158 9.95 4.94 0.00 5.69
8805 9753 6.146510 GTGGATTTGAAGAACATGTACGTACA 59.853 38.462 29.15 29.15 40.98 2.90
8833 9781 7.595604 TCTTGTGAACGTGTAAGTATATGACA 58.404 34.615 0.00 0.00 0.00 3.58
8862 9810 7.148407 CCTTACACCATGAGTACATTCAAAGAC 60.148 40.741 0.00 0.00 34.15 3.01
8878 9826 1.066430 CGTACTGGCACCTTACACCAT 60.066 52.381 0.00 0.00 31.79 3.55
8880 9828 1.017701 GCGTACTGGCACCTTACACC 61.018 60.000 0.00 0.00 0.00 4.16
8881 9829 0.320073 TGCGTACTGGCACCTTACAC 60.320 55.000 0.00 0.00 38.17 2.90
8936 9891 7.463469 TCTTTTCTTTTCTTTTCCAAATCGC 57.537 32.000 0.00 0.00 0.00 4.58
8953 9908 8.623903 GGGCAATTCAATTTTCTTTTCTTTTCT 58.376 29.630 0.00 0.00 0.00 2.52
8954 9909 7.862372 GGGGCAATTCAATTTTCTTTTCTTTTC 59.138 33.333 0.00 0.00 0.00 2.29
8955 9910 7.560991 AGGGGCAATTCAATTTTCTTTTCTTTT 59.439 29.630 0.00 0.00 0.00 2.27
8956 9911 7.013559 CAGGGGCAATTCAATTTTCTTTTCTTT 59.986 33.333 0.00 0.00 0.00 2.52
8957 9912 6.487668 CAGGGGCAATTCAATTTTCTTTTCTT 59.512 34.615 0.00 0.00 0.00 2.52
8958 9913 5.999600 CAGGGGCAATTCAATTTTCTTTTCT 59.000 36.000 0.00 0.00 0.00 2.52
8959 9914 5.997129 TCAGGGGCAATTCAATTTTCTTTTC 59.003 36.000 0.00 0.00 0.00 2.29
8960 9915 5.939447 TCAGGGGCAATTCAATTTTCTTTT 58.061 33.333 0.00 0.00 0.00 2.27
8961 9916 5.565455 TCAGGGGCAATTCAATTTTCTTT 57.435 34.783 0.00 0.00 0.00 2.52
8962 9917 5.767277 ATCAGGGGCAATTCAATTTTCTT 57.233 34.783 0.00 0.00 0.00 2.52
8963 9918 6.872585 TTATCAGGGGCAATTCAATTTTCT 57.127 33.333 0.00 0.00 0.00 2.52
8964 9919 9.264719 CTATTTATCAGGGGCAATTCAATTTTC 57.735 33.333 0.00 0.00 0.00 2.29
8965 9920 8.991275 TCTATTTATCAGGGGCAATTCAATTTT 58.009 29.630 0.00 0.00 0.00 1.82
8969 9924 6.672593 ACTCTATTTATCAGGGGCAATTCAA 58.327 36.000 0.00 0.00 0.00 2.69
8994 9949 3.461061 GACTGCCTGATCGATTTCATCA 58.539 45.455 0.00 0.00 0.00 3.07
9000 9955 1.043116 TCCCGACTGCCTGATCGATT 61.043 55.000 0.00 0.00 40.86 3.34
9001 9956 1.455773 TCCCGACTGCCTGATCGAT 60.456 57.895 0.00 0.00 40.86 3.59
9002 9957 2.044352 TCCCGACTGCCTGATCGA 60.044 61.111 0.00 0.00 40.86 3.59
9003 9958 2.415010 CTCCCGACTGCCTGATCG 59.585 66.667 0.00 0.00 38.08 3.69
9015 9970 2.258591 CCCGATCGTATGCTCCCG 59.741 66.667 15.09 0.00 0.00 5.14
9030 9985 1.550130 TACTGCTGCTGGTACCACCC 61.550 60.000 11.60 5.65 37.50 4.61
9031 9986 0.323629 TTACTGCTGCTGGTACCACC 59.676 55.000 11.60 5.17 39.22 4.61
9137 10093 7.361542 GCCGTCCGTTTGAGTAGATAGATTATA 60.362 40.741 0.00 0.00 0.00 0.98
9140 10096 4.499357 GCCGTCCGTTTGAGTAGATAGATT 60.499 45.833 0.00 0.00 0.00 2.40
9197 10165 1.069906 GCACATGGACAGTGAAACGTC 60.070 52.381 0.00 0.00 45.86 4.34
9223 10191 2.046507 CTGCTGCAGTGGGAGGTC 60.047 66.667 21.21 0.00 32.28 3.85
9235 10203 1.515088 CTACTCCACGTCGCTGCTG 60.515 63.158 0.00 0.00 0.00 4.41
9242 10210 0.389948 CCACCAAGCTACTCCACGTC 60.390 60.000 0.00 0.00 0.00 4.34
9243 10211 1.119574 ACCACCAAGCTACTCCACGT 61.120 55.000 0.00 0.00 0.00 4.49
9244 10212 0.892755 TACCACCAAGCTACTCCACG 59.107 55.000 0.00 0.00 0.00 4.94
9245 10213 1.405661 GCTACCACCAAGCTACTCCAC 60.406 57.143 0.00 0.00 37.01 4.02
9246 10214 0.902531 GCTACCACCAAGCTACTCCA 59.097 55.000 0.00 0.00 37.01 3.86
9247 10215 0.902531 TGCTACCACCAAGCTACTCC 59.097 55.000 0.00 0.00 40.73 3.85
9248 10216 1.740718 GCTGCTACCACCAAGCTACTC 60.741 57.143 0.00 0.00 40.73 2.59
9249 10217 0.250513 GCTGCTACCACCAAGCTACT 59.749 55.000 0.00 0.00 40.73 2.57
9250 10218 1.084370 CGCTGCTACCACCAAGCTAC 61.084 60.000 0.00 0.00 40.73 3.58
9251 10219 1.218047 CGCTGCTACCACCAAGCTA 59.782 57.895 0.00 0.00 40.73 3.32
9252 10220 2.046892 CGCTGCTACCACCAAGCT 60.047 61.111 0.00 0.00 40.73 3.74
9253 10221 3.127533 CCGCTGCTACCACCAAGC 61.128 66.667 0.00 0.00 40.50 4.01
9254 10222 3.127533 GCCGCTGCTACCACCAAG 61.128 66.667 0.00 0.00 33.53 3.61
9255 10223 3.266686 ATGCCGCTGCTACCACCAA 62.267 57.895 0.70 0.00 38.71 3.67
9256 10224 3.716195 ATGCCGCTGCTACCACCA 61.716 61.111 0.70 0.00 38.71 4.17
9257 10225 3.204827 CATGCCGCTGCTACCACC 61.205 66.667 0.70 0.00 38.71 4.61
9258 10226 2.436646 ACATGCCGCTGCTACCAC 60.437 61.111 0.70 0.00 38.71 4.16
9259 10227 2.436469 CACATGCCGCTGCTACCA 60.436 61.111 0.70 0.00 38.71 3.25
9260 10228 3.204827 CCACATGCCGCTGCTACC 61.205 66.667 0.70 0.00 38.71 3.18
9261 10229 3.204827 CCCACATGCCGCTGCTAC 61.205 66.667 0.70 0.00 38.71 3.58



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.