Multiple sequence alignment - TraesCS2D01G491100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G491100 chr2D 100.000 3597 0 0 1 3597 589685976 589682380 0.000000e+00 6643.0
1 TraesCS2D01G491100 chr2D 90.446 1884 112 40 754 2600 589522383 589524235 0.000000e+00 2420.0
2 TraesCS2D01G491100 chr2D 86.869 1348 162 9 1124 2463 589282285 589283625 0.000000e+00 1495.0
3 TraesCS2D01G491100 chr2D 93.015 544 34 4 3057 3597 645256319 645256861 0.000000e+00 791.0
4 TraesCS2D01G491100 chr2D 90.000 100 8 2 565 663 589685318 589685220 1.050000e-25 128.0
5 TraesCS2D01G491100 chr2D 90.000 100 8 2 659 757 589685412 589685314 1.050000e-25 128.0
6 TraesCS2D01G491100 chr2A 92.524 1886 89 21 761 2638 724018804 724016963 0.000000e+00 2654.0
7 TraesCS2D01G491100 chr2A 91.065 1690 93 31 933 2584 723867012 723868681 0.000000e+00 2231.0
8 TraesCS2D01G491100 chr2A 86.384 1344 176 4 1124 2463 723625327 723626667 0.000000e+00 1461.0
9 TraesCS2D01G491100 chr2A 91.453 468 29 6 1 458 724019539 724019073 1.820000e-177 632.0
10 TraesCS2D01G491100 chr2B 90.808 1980 95 35 757 2667 713940739 713938778 0.000000e+00 2567.0
11 TraesCS2D01G491100 chr2B 92.560 1586 87 21 933 2508 713790922 713792486 0.000000e+00 2246.0
12 TraesCS2D01G491100 chr2B 86.123 1362 173 10 1112 2463 712889696 712891051 0.000000e+00 1454.0
13 TraesCS2D01G491100 chr2B 92.796 583 35 5 3018 3597 296064620 296064042 0.000000e+00 837.0
14 TraesCS2D01G491100 chr2B 93.432 472 28 2 1 471 713941205 713940736 0.000000e+00 697.0
15 TraesCS2D01G491100 chr2B 84.729 203 20 7 486 677 330561348 330561146 3.660000e-45 193.0
16 TraesCS2D01G491100 chr2B 83.417 199 18 11 486 671 487648786 487648982 1.720000e-38 171.0
17 TraesCS2D01G491100 chr2B 81.720 186 21 6 479 653 573590847 573590664 3.740000e-30 143.0
18 TraesCS2D01G491100 chr2B 84.762 105 7 6 660 755 67880899 67881003 2.960000e-16 97.1
19 TraesCS2D01G491100 chr2B 84.259 108 7 6 660 757 399328323 399328216 2.960000e-16 97.1
20 TraesCS2D01G491100 chr3B 95.337 579 23 4 3018 3595 599805068 599805643 0.000000e+00 917.0
21 TraesCS2D01G491100 chr3B 93.482 583 33 5 3018 3597 347940399 347939819 0.000000e+00 861.0
22 TraesCS2D01G491100 chr3B 86.458 192 16 7 480 661 316816626 316816435 6.090000e-48 202.0
23 TraesCS2D01G491100 chr3B 83.871 186 17 10 486 661 742301062 742300880 7.990000e-37 165.0
24 TraesCS2D01G491100 chr7B 78.738 1331 238 36 1138 2452 679359683 679360984 0.000000e+00 848.0
25 TraesCS2D01G491100 chr7B 87.634 186 19 4 480 661 289211866 289211681 2.810000e-51 213.0
26 TraesCS2D01G491100 chr7B 82.828 198 21 9 486 671 142563293 142563489 7.990000e-37 165.0
27 TraesCS2D01G491100 chr7B 86.735 98 10 3 660 755 289211777 289211681 4.910000e-19 106.0
28 TraesCS2D01G491100 chr7B 84.259 108 7 6 660 757 312132274 312132167 2.960000e-16 97.1
29 TraesCS2D01G491100 chr4B 92.171 562 41 3 3038 3597 286105615 286105055 0.000000e+00 791.0
30 TraesCS2D01G491100 chr4B 85.027 187 18 6 487 663 408725636 408725822 7.930000e-42 182.0
31 TraesCS2D01G491100 chr4B 83.333 108 8 6 660 757 195915723 195915616 1.380000e-14 91.6
32 TraesCS2D01G491100 chr4B 83.333 108 8 6 660 757 408725715 408725822 1.380000e-14 91.6
33 TraesCS2D01G491100 chr3D 91.404 570 42 7 3033 3597 568100052 568099485 0.000000e+00 774.0
34 TraesCS2D01G491100 chr6D 90.444 586 50 5 3018 3597 973969 974554 0.000000e+00 767.0
35 TraesCS2D01G491100 chr6D 86.096 187 15 6 480 655 263994528 263994714 1.320000e-44 191.0
36 TraesCS2D01G491100 chr6D 85.143 175 13 8 490 652 458329193 458329020 2.220000e-37 167.0
37 TraesCS2D01G491100 chr5A 90.534 581 50 5 3018 3594 262344533 262343954 0.000000e+00 763.0
38 TraesCS2D01G491100 chr5A 89.983 589 51 8 3015 3597 708539786 708540372 0.000000e+00 754.0
39 TraesCS2D01G491100 chr5A 88.462 52 3 3 2676 2726 621541421 621541372 3.880000e-05 60.2
40 TraesCS2D01G491100 chrUn 75.952 1339 254 43 1138 2451 15345580 15346875 8.480000e-176 627.0
41 TraesCS2D01G491100 chrUn 84.946 186 18 6 486 661 18273832 18273647 2.850000e-41 180.0
42 TraesCS2D01G491100 chrUn 84.946 186 18 6 486 661 18278221 18278036 2.850000e-41 180.0
43 TraesCS2D01G491100 chrUn 84.946 186 18 6 486 661 338876522 338876337 2.850000e-41 180.0
44 TraesCS2D01G491100 chr1B 85.354 198 17 8 486 671 228427468 228427665 1.020000e-45 195.0
45 TraesCS2D01G491100 chr1B 85.492 193 17 8 480 661 305905123 305905315 1.320000e-44 191.0
46 TraesCS2D01G491100 chr1B 81.765 170 19 8 519 677 147639834 147639666 8.100000e-27 132.0
47 TraesCS2D01G491100 chr6B 86.339 183 15 6 486 658 445077953 445077771 1.320000e-44 191.0
48 TraesCS2D01G491100 chr6B 84.896 192 19 7 480 661 293753392 293753583 6.130000e-43 185.0
49 TraesCS2D01G491100 chr6B 87.500 136 13 4 479 611 685354381 685354247 1.730000e-33 154.0
50 TraesCS2D01G491100 chr6B 80.645 186 21 10 486 658 696530790 696530607 2.910000e-26 130.0
51 TraesCS2D01G491100 chr6B 83.333 108 8 8 660 757 383287822 383287929 1.380000e-14 91.6
52 TraesCS2D01G491100 chr5D 82.075 212 21 12 479 681 30972680 30972477 7.990000e-37 165.0
53 TraesCS2D01G491100 chr5D 85.185 108 7 4 660 758 319952315 319952208 6.350000e-18 102.0
54 TraesCS2D01G491100 chr5B 88.000 125 15 0 486 610 601446282 601446158 8.050000e-32 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G491100 chr2D 589682380 589685976 3596 True 2299.666667 6643 93.333333 1 3597 3 chr2D.!!$R1 3596
1 TraesCS2D01G491100 chr2D 589522383 589524235 1852 False 2420.000000 2420 90.446000 754 2600 1 chr2D.!!$F2 1846
2 TraesCS2D01G491100 chr2D 589282285 589283625 1340 False 1495.000000 1495 86.869000 1124 2463 1 chr2D.!!$F1 1339
3 TraesCS2D01G491100 chr2D 645256319 645256861 542 False 791.000000 791 93.015000 3057 3597 1 chr2D.!!$F3 540
4 TraesCS2D01G491100 chr2A 723867012 723868681 1669 False 2231.000000 2231 91.065000 933 2584 1 chr2A.!!$F2 1651
5 TraesCS2D01G491100 chr2A 724016963 724019539 2576 True 1643.000000 2654 91.988500 1 2638 2 chr2A.!!$R1 2637
6 TraesCS2D01G491100 chr2A 723625327 723626667 1340 False 1461.000000 1461 86.384000 1124 2463 1 chr2A.!!$F1 1339
7 TraesCS2D01G491100 chr2B 713790922 713792486 1564 False 2246.000000 2246 92.560000 933 2508 1 chr2B.!!$F4 1575
8 TraesCS2D01G491100 chr2B 713938778 713941205 2427 True 1632.000000 2567 92.120000 1 2667 2 chr2B.!!$R5 2666
9 TraesCS2D01G491100 chr2B 712889696 712891051 1355 False 1454.000000 1454 86.123000 1112 2463 1 chr2B.!!$F3 1351
10 TraesCS2D01G491100 chr2B 296064042 296064620 578 True 837.000000 837 92.796000 3018 3597 1 chr2B.!!$R1 579
11 TraesCS2D01G491100 chr3B 599805068 599805643 575 False 917.000000 917 95.337000 3018 3595 1 chr3B.!!$F1 577
12 TraesCS2D01G491100 chr3B 347939819 347940399 580 True 861.000000 861 93.482000 3018 3597 1 chr3B.!!$R2 579
13 TraesCS2D01G491100 chr7B 679359683 679360984 1301 False 848.000000 848 78.738000 1138 2452 1 chr7B.!!$F2 1314
14 TraesCS2D01G491100 chr4B 286105055 286105615 560 True 791.000000 791 92.171000 3038 3597 1 chr4B.!!$R2 559
15 TraesCS2D01G491100 chr3D 568099485 568100052 567 True 774.000000 774 91.404000 3033 3597 1 chr3D.!!$R1 564
16 TraesCS2D01G491100 chr6D 973969 974554 585 False 767.000000 767 90.444000 3018 3597 1 chr6D.!!$F1 579
17 TraesCS2D01G491100 chr5A 262343954 262344533 579 True 763.000000 763 90.534000 3018 3594 1 chr5A.!!$R1 576
18 TraesCS2D01G491100 chr5A 708539786 708540372 586 False 754.000000 754 89.983000 3015 3597 1 chr5A.!!$F1 582
19 TraesCS2D01G491100 chrUn 15345580 15346875 1295 False 627.000000 627 75.952000 1138 2451 1 chrUn.!!$F1 1313

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
455 466 0.179108 CGTCCCGGTTTCATCCTCTC 60.179 60.000 0.00 0.0 0.00 3.20 F
666 677 1.632409 ACGGAGGGACTAGTAGTGTGA 59.368 52.381 7.76 0.0 41.55 3.58 F
2472 2794 1.587613 CTCGACTAGCTCCGCTTGC 60.588 63.158 0.00 0.0 40.44 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2039 2347 1.296392 CCAGAGGATGACGTTGCCA 59.704 57.895 0.00 0.0 0.00 4.92 R
2474 2796 0.179059 TGGCACATGGCAGGTATACG 60.179 55.000 3.74 0.0 46.12 3.06 R
3570 3949 4.325030 GGGGGTATCTTCCTGAATTGTTCA 60.325 45.833 0.00 0.0 38.17 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
234 244 1.985159 ACACCACTAAGGGCTCATTCA 59.015 47.619 0.00 0.00 43.89 2.57
309 319 8.360390 GGCCCTAAATAAAATATCAAAGGACAG 58.640 37.037 0.00 0.00 0.00 3.51
323 333 3.382048 AGGACAGTTTACCGAGTCAAC 57.618 47.619 0.00 0.00 32.79 3.18
351 361 1.995376 AATTTGCCCGTTCTGACCTT 58.005 45.000 0.00 0.00 0.00 3.50
361 371 1.002792 GTTCTGACCTTTGAACGTGGC 60.003 52.381 0.00 0.00 34.21 5.01
393 403 8.582437 GCCAGTGTAGGACAACATTAGTATATA 58.418 37.037 0.00 0.00 0.00 0.86
455 466 0.179108 CGTCCCGGTTTCATCCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
460 471 1.765314 CCGGTTTCATCCTCTCCTCAT 59.235 52.381 0.00 0.00 0.00 2.90
464 475 3.454082 GGTTTCATCCTCTCCTCATCAGT 59.546 47.826 0.00 0.00 0.00 3.41
466 477 5.452636 GGTTTCATCCTCTCCTCATCAGTAC 60.453 48.000 0.00 0.00 0.00 2.73
467 478 4.805140 TCATCCTCTCCTCATCAGTACT 57.195 45.455 0.00 0.00 0.00 2.73
468 479 4.724399 TCATCCTCTCCTCATCAGTACTC 58.276 47.826 0.00 0.00 0.00 2.59
470 481 4.431416 TCCTCTCCTCATCAGTACTCTC 57.569 50.000 0.00 0.00 0.00 3.20
471 482 4.044308 TCCTCTCCTCATCAGTACTCTCT 58.956 47.826 0.00 0.00 0.00 3.10
472 483 4.102524 TCCTCTCCTCATCAGTACTCTCTC 59.897 50.000 0.00 0.00 0.00 3.20
473 484 4.389374 CTCTCCTCATCAGTACTCTCTCC 58.611 52.174 0.00 0.00 0.00 3.71
474 485 3.138304 CTCCTCATCAGTACTCTCTCCG 58.862 54.545 0.00 0.00 0.00 4.63
475 486 2.506231 TCCTCATCAGTACTCTCTCCGT 59.494 50.000 0.00 0.00 0.00 4.69
476 487 3.054287 TCCTCATCAGTACTCTCTCCGTT 60.054 47.826 0.00 0.00 0.00 4.44
477 488 3.697045 CCTCATCAGTACTCTCTCCGTTT 59.303 47.826 0.00 0.00 0.00 3.60
478 489 4.201970 CCTCATCAGTACTCTCTCCGTTTC 60.202 50.000 0.00 0.00 0.00 2.78
479 490 4.590918 TCATCAGTACTCTCTCCGTTTCT 58.409 43.478 0.00 0.00 0.00 2.52
481 492 5.477291 TCATCAGTACTCTCTCCGTTTCTTT 59.523 40.000 0.00 0.00 0.00 2.52
484 495 7.463961 TCAGTACTCTCTCCGTTTCTTTATT 57.536 36.000 0.00 0.00 0.00 1.40
486 497 9.017509 TCAGTACTCTCTCCGTTTCTTTATTAA 57.982 33.333 0.00 0.00 0.00 1.40
487 498 9.635520 CAGTACTCTCTCCGTTTCTTTATTAAA 57.364 33.333 0.00 0.00 0.00 1.52
580 591 8.948631 ATAGATTTCGTAGTGTGAATGTTGAT 57.051 30.769 0.00 0.00 0.00 2.57
582 593 8.186178 AGATTTCGTAGTGTGAATGTTGATAC 57.814 34.615 0.00 0.00 0.00 2.24
583 594 6.715344 TTTCGTAGTGTGAATGTTGATACC 57.285 37.500 0.00 0.00 0.00 2.73
584 595 5.654603 TCGTAGTGTGAATGTTGATACCT 57.345 39.130 0.00 0.00 0.00 3.08
585 596 6.032956 TCGTAGTGTGAATGTTGATACCTT 57.967 37.500 0.00 0.00 0.00 3.50
586 597 6.460781 TCGTAGTGTGAATGTTGATACCTTT 58.539 36.000 0.00 0.00 0.00 3.11
587 598 6.932400 TCGTAGTGTGAATGTTGATACCTTTT 59.068 34.615 0.00 0.00 0.00 2.27
588 599 7.442969 TCGTAGTGTGAATGTTGATACCTTTTT 59.557 33.333 0.00 0.00 0.00 1.94
589 600 7.744715 CGTAGTGTGAATGTTGATACCTTTTTC 59.255 37.037 0.00 0.00 0.00 2.29
590 601 7.823745 AGTGTGAATGTTGATACCTTTTTCT 57.176 32.000 0.00 0.00 0.00 2.52
591 602 8.918202 AGTGTGAATGTTGATACCTTTTTCTA 57.082 30.769 0.00 0.00 0.00 2.10
592 603 8.784043 AGTGTGAATGTTGATACCTTTTTCTAC 58.216 33.333 0.00 0.00 0.00 2.59
593 604 7.744715 GTGTGAATGTTGATACCTTTTTCTACG 59.255 37.037 0.00 0.00 0.00 3.51
594 605 7.658167 TGTGAATGTTGATACCTTTTTCTACGA 59.342 33.333 0.00 0.00 0.00 3.43
595 606 8.500773 GTGAATGTTGATACCTTTTTCTACGAA 58.499 33.333 0.00 0.00 0.00 3.85
596 607 8.717821 TGAATGTTGATACCTTTTTCTACGAAG 58.282 33.333 0.00 0.00 0.00 3.79
598 609 8.617290 ATGTTGATACCTTTTTCTACGAAGTT 57.383 30.769 0.00 0.00 37.78 2.66
599 610 9.715121 ATGTTGATACCTTTTTCTACGAAGTTA 57.285 29.630 0.00 0.00 37.78 2.24
600 611 9.715121 TGTTGATACCTTTTTCTACGAAGTTAT 57.285 29.630 0.00 0.00 37.78 1.89
603 614 9.932207 TGATACCTTTTTCTACGAAGTTATTCA 57.068 29.630 0.00 0.00 37.78 2.57
607 618 9.117183 ACCTTTTTCTACGAAGTTATTCAAACT 57.883 29.630 0.00 0.00 37.78 2.66
608 619 9.946165 CCTTTTTCTACGAAGTTATTCAAACTT 57.054 29.630 2.92 2.92 37.78 2.66
612 623 9.925268 TTTCTACGAAGTTATTCAAACTTTGAC 57.075 29.630 19.70 2.52 37.78 3.18
613 624 8.882415 TCTACGAAGTTATTCAAACTTTGACT 57.118 30.769 19.70 1.93 37.78 3.41
614 625 9.321562 TCTACGAAGTTATTCAAACTTTGACTT 57.678 29.630 19.70 5.11 37.78 3.01
615 626 9.931210 CTACGAAGTTATTCAAACTTTGACTTT 57.069 29.630 19.70 5.01 37.78 2.66
616 627 8.614994 ACGAAGTTATTCAAACTTTGACTTTG 57.385 30.769 19.70 10.37 37.78 2.77
617 628 8.455682 ACGAAGTTATTCAAACTTTGACTTTGA 58.544 29.630 19.70 2.98 37.78 2.69
618 629 8.734030 CGAAGTTATTCAAACTTTGACTTTGAC 58.266 33.333 10.94 0.81 41.82 3.18
619 630 8.926715 AAGTTATTCAAACTTTGACTTTGACC 57.073 30.769 3.56 0.00 39.87 4.02
620 631 8.062065 AGTTATTCAAACTTTGACTTTGACCA 57.938 30.769 3.56 0.00 39.87 4.02
621 632 8.527810 AGTTATTCAAACTTTGACTTTGACCAA 58.472 29.630 3.56 0.00 39.87 3.67
625 636 7.169158 TCAAACTTTGACTTTGACCAAATCT 57.831 32.000 0.00 0.00 33.60 2.40
627 638 8.744652 TCAAACTTTGACTTTGACCAAATCTTA 58.255 29.630 0.00 0.00 33.60 2.10
633 644 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
649 660 9.834628 TCTTATATGCAAACTAAAAAGAAACGG 57.165 29.630 0.00 0.00 0.00 4.44
650 661 9.834628 CTTATATGCAAACTAAAAAGAAACGGA 57.165 29.630 0.00 0.00 0.00 4.69
651 662 9.834628 TTATATGCAAACTAAAAAGAAACGGAG 57.165 29.630 0.00 0.00 0.00 4.63
652 663 4.927422 TGCAAACTAAAAAGAAACGGAGG 58.073 39.130 0.00 0.00 0.00 4.30
653 664 4.202070 TGCAAACTAAAAAGAAACGGAGGG 60.202 41.667 0.00 0.00 0.00 4.30
654 665 4.037089 GCAAACTAAAAAGAAACGGAGGGA 59.963 41.667 0.00 0.00 0.00 4.20
655 666 5.516996 CAAACTAAAAAGAAACGGAGGGAC 58.483 41.667 0.00 0.00 0.00 4.46
657 668 5.813513 ACTAAAAAGAAACGGAGGGACTA 57.186 39.130 0.00 0.00 41.55 2.59
658 669 5.791666 ACTAAAAAGAAACGGAGGGACTAG 58.208 41.667 0.00 0.00 41.55 2.57
659 670 4.701651 AAAAAGAAACGGAGGGACTAGT 57.298 40.909 0.00 0.00 41.55 2.57
660 671 5.813513 AAAAAGAAACGGAGGGACTAGTA 57.186 39.130 0.00 0.00 41.55 1.82
661 672 5.402997 AAAAGAAACGGAGGGACTAGTAG 57.597 43.478 0.00 0.00 41.55 2.57
662 673 3.735720 AGAAACGGAGGGACTAGTAGT 57.264 47.619 1.37 1.37 41.55 2.73
663 674 3.354467 AGAAACGGAGGGACTAGTAGTG 58.646 50.000 7.76 0.00 41.55 2.74
664 675 2.895242 AACGGAGGGACTAGTAGTGT 57.105 50.000 7.76 0.00 41.55 3.55
665 676 2.125773 ACGGAGGGACTAGTAGTGTG 57.874 55.000 7.76 0.00 41.55 3.82
666 677 1.632409 ACGGAGGGACTAGTAGTGTGA 59.368 52.381 7.76 0.00 41.55 3.58
667 678 2.040813 ACGGAGGGACTAGTAGTGTGAA 59.959 50.000 7.76 0.00 41.55 3.18
668 679 3.288964 CGGAGGGACTAGTAGTGTGAAT 58.711 50.000 7.76 0.00 41.55 2.57
669 680 3.066900 CGGAGGGACTAGTAGTGTGAATG 59.933 52.174 7.76 0.00 41.55 2.67
670 681 4.024670 GGAGGGACTAGTAGTGTGAATGT 58.975 47.826 7.76 0.00 41.55 2.71
671 682 4.466726 GGAGGGACTAGTAGTGTGAATGTT 59.533 45.833 7.76 0.00 41.55 2.71
672 683 5.407407 AGGGACTAGTAGTGTGAATGTTG 57.593 43.478 7.76 0.00 36.02 3.33
673 684 5.084519 AGGGACTAGTAGTGTGAATGTTGA 58.915 41.667 7.76 0.00 36.02 3.18
674 685 5.721960 AGGGACTAGTAGTGTGAATGTTGAT 59.278 40.000 7.76 0.00 36.02 2.57
675 686 6.895756 AGGGACTAGTAGTGTGAATGTTGATA 59.104 38.462 7.76 0.00 36.02 2.15
676 687 7.565398 AGGGACTAGTAGTGTGAATGTTGATAT 59.435 37.037 7.76 0.00 36.02 1.63
677 688 7.868415 GGGACTAGTAGTGTGAATGTTGATATC 59.132 40.741 7.76 0.00 0.00 1.63
678 689 8.634444 GGACTAGTAGTGTGAATGTTGATATCT 58.366 37.037 7.76 0.00 0.00 1.98
683 694 9.950496 AGTAGTGTGAATGTTGATATCTTTTCT 57.050 29.630 3.98 0.00 0.00 2.52
685 696 8.853077 AGTGTGAATGTTGATATCTTTTCTCA 57.147 30.769 3.98 6.31 0.00 3.27
686 697 8.725148 AGTGTGAATGTTGATATCTTTTCTCAC 58.275 33.333 20.20 20.20 0.00 3.51
687 698 8.506437 GTGTGAATGTTGATATCTTTTCTCACA 58.494 33.333 21.38 20.04 0.00 3.58
688 699 9.065798 TGTGAATGTTGATATCTTTTCTCACAA 57.934 29.630 19.26 9.67 0.00 3.33
689 700 9.897744 GTGAATGTTGATATCTTTTCTCACAAA 57.102 29.630 16.30 0.00 0.00 2.83
720 731 9.874205 TTCAAACTTTGACTTTGATCAAATCTT 57.126 25.926 20.76 8.81 45.21 2.40
751 762 7.581476 CAAACTAAAAAGAAATGGCGAGAGTA 58.419 34.615 0.00 0.00 0.00 2.59
752 763 6.723131 ACTAAAAAGAAATGGCGAGAGTAC 57.277 37.500 0.00 0.00 0.00 2.73
765 943 4.318689 GGCGAGAGTACTAGTATCAACGAC 60.319 50.000 18.93 15.04 0.00 4.34
811 993 3.470267 TCGACGGCGAGAAAATGC 58.530 55.556 10.67 0.00 42.51 3.56
833 1020 3.193903 CCATGCATGGTCAACTCAATTCA 59.806 43.478 33.68 0.00 43.05 2.57
839 1026 4.852134 TGGTCAACTCAATTCACCAATG 57.148 40.909 0.00 0.00 34.10 2.82
840 1027 3.005684 TGGTCAACTCAATTCACCAATGC 59.994 43.478 0.00 0.00 34.10 3.56
842 1029 4.232221 GTCAACTCAATTCACCAATGCAG 58.768 43.478 0.00 0.00 0.00 4.41
843 1030 3.890756 TCAACTCAATTCACCAATGCAGT 59.109 39.130 0.00 0.00 0.00 4.40
1026 1234 7.093068 ACCATCCAATAATCACACACTACTACA 60.093 37.037 0.00 0.00 0.00 2.74
1027 1235 7.439356 CCATCCAATAATCACACACTACTACAG 59.561 40.741 0.00 0.00 0.00 2.74
1101 1361 3.863424 CACCCATACGTGTAACTAAGCAG 59.137 47.826 0.00 0.00 31.75 4.24
1120 1380 6.502136 AGCAGTTAAGCTCATTCTTTTACC 57.498 37.500 0.00 0.00 42.18 2.85
1135 1401 2.536761 TTACCCACTTTCACTGTCGG 57.463 50.000 0.00 0.00 0.00 4.79
1487 1768 3.239253 AAGCCCACGTCGGAGGTT 61.239 61.111 2.29 4.19 36.56 3.50
2039 2347 2.718073 GGTGCCGGACGGATACACT 61.718 63.158 15.99 0.00 37.50 3.55
2091 2399 4.657824 CGGCGGGTGAACTCGTGT 62.658 66.667 4.42 0.00 0.00 4.49
2472 2794 1.587613 CTCGACTAGCTCCGCTTGC 60.588 63.158 0.00 0.00 40.44 4.01
2473 2795 2.181777 CGACTAGCTCCGCTTGCA 59.818 61.111 0.00 0.00 40.44 4.08
2474 2796 2.161486 CGACTAGCTCCGCTTGCAC 61.161 63.158 0.00 0.00 40.44 4.57
2475 2797 2.125912 ACTAGCTCCGCTTGCACG 60.126 61.111 0.00 0.00 40.44 5.34
2476 2798 2.125912 CTAGCTCCGCTTGCACGT 60.126 61.111 0.00 0.00 40.44 4.49
2477 2799 1.138883 CTAGCTCCGCTTGCACGTA 59.861 57.895 0.00 0.00 40.44 3.57
2492 2818 0.179056 ACGTATACCTGCCATGTGCC 60.179 55.000 0.00 0.00 40.16 5.01
2493 2819 0.179059 CGTATACCTGCCATGTGCCA 60.179 55.000 0.00 0.00 40.16 4.92
2494 2820 1.745484 CGTATACCTGCCATGTGCCAA 60.745 52.381 0.00 0.00 40.16 4.52
2510 2836 2.291217 TGCCAATAATGTGTGCCTGGTA 60.291 45.455 0.00 0.00 0.00 3.25
2539 2898 4.885907 TCAACGTATAGCTAGTTGCCTAGT 59.114 41.667 15.89 0.00 43.35 2.57
2541 2900 5.184340 ACGTATAGCTAGTTGCCTAGTTG 57.816 43.478 0.00 0.00 42.35 3.16
2543 2903 5.824624 ACGTATAGCTAGTTGCCTAGTTGTA 59.175 40.000 0.00 0.00 42.35 2.41
2546 2906 8.509690 CGTATAGCTAGTTGCCTAGTTGTATTA 58.490 37.037 0.00 0.00 42.35 0.98
2590 2950 3.319122 GTCCATGCTGTTTTGGAAGAGTT 59.681 43.478 0.00 0.00 43.42 3.01
2600 2960 8.968242 GCTGTTTTGGAAGAGTTAATAAACAAG 58.032 33.333 0.00 0.00 38.12 3.16
2628 2995 9.527157 TTTTAAGATGGTGAACATGATTAAGGA 57.473 29.630 0.00 0.00 40.72 3.36
2629 2996 8.737168 TTAAGATGGTGAACATGATTAAGGAG 57.263 34.615 0.00 0.00 40.72 3.69
2641 3008 9.520204 AACATGATTAAGGAGAATATTTTTGCG 57.480 29.630 0.00 0.00 0.00 4.85
2642 3009 8.137437 ACATGATTAAGGAGAATATTTTTGCGG 58.863 33.333 0.00 0.00 0.00 5.69
2643 3010 7.038154 TGATTAAGGAGAATATTTTTGCGGG 57.962 36.000 0.00 0.00 0.00 6.13
2644 3011 6.831353 TGATTAAGGAGAATATTTTTGCGGGA 59.169 34.615 0.00 0.00 0.00 5.14
2645 3012 7.340743 TGATTAAGGAGAATATTTTTGCGGGAA 59.659 33.333 0.00 0.00 0.00 3.97
2646 3013 5.993748 AAGGAGAATATTTTTGCGGGAAA 57.006 34.783 0.00 0.00 0.00 3.13
2647 3014 5.582689 AGGAGAATATTTTTGCGGGAAAG 57.417 39.130 0.00 0.00 0.00 2.62
2648 3015 4.402474 AGGAGAATATTTTTGCGGGAAAGG 59.598 41.667 0.00 0.00 0.00 3.11
2649 3016 4.112634 GAGAATATTTTTGCGGGAAAGGC 58.887 43.478 0.00 0.00 0.00 4.35
2650 3017 3.769300 AGAATATTTTTGCGGGAAAGGCT 59.231 39.130 0.00 0.00 0.00 4.58
2651 3018 4.953579 AGAATATTTTTGCGGGAAAGGCTA 59.046 37.500 0.00 0.00 0.00 3.93
2652 3019 5.598417 AGAATATTTTTGCGGGAAAGGCTAT 59.402 36.000 0.00 0.00 0.00 2.97
2653 3020 5.869649 ATATTTTTGCGGGAAAGGCTATT 57.130 34.783 0.00 0.00 0.00 1.73
2654 3021 3.311486 TTTTTGCGGGAAAGGCTATTG 57.689 42.857 0.00 0.00 0.00 1.90
2655 3022 2.208132 TTTGCGGGAAAGGCTATTGA 57.792 45.000 0.00 0.00 0.00 2.57
2656 3023 1.750193 TTGCGGGAAAGGCTATTGAG 58.250 50.000 0.00 0.00 0.00 3.02
2657 3024 0.908910 TGCGGGAAAGGCTATTGAGA 59.091 50.000 0.00 0.00 0.00 3.27
2658 3025 1.134401 TGCGGGAAAGGCTATTGAGAG 60.134 52.381 0.00 0.00 0.00 3.20
2659 3026 1.134371 GCGGGAAAGGCTATTGAGAGT 60.134 52.381 0.00 0.00 0.00 3.24
2660 3027 2.681097 GCGGGAAAGGCTATTGAGAGTT 60.681 50.000 0.00 0.00 0.00 3.01
2661 3028 3.610911 CGGGAAAGGCTATTGAGAGTTT 58.389 45.455 0.00 0.00 0.00 2.66
2662 3029 4.010349 CGGGAAAGGCTATTGAGAGTTTT 58.990 43.478 0.00 0.00 0.00 2.43
2663 3030 4.095036 CGGGAAAGGCTATTGAGAGTTTTC 59.905 45.833 0.00 0.00 0.00 2.29
2664 3031 5.257262 GGGAAAGGCTATTGAGAGTTTTCT 58.743 41.667 0.00 0.00 36.01 2.52
2665 3032 5.712446 GGGAAAGGCTATTGAGAGTTTTCTT 59.288 40.000 0.00 0.00 32.53 2.52
2666 3033 6.209589 GGGAAAGGCTATTGAGAGTTTTCTTT 59.790 38.462 0.00 0.00 32.53 2.52
2667 3034 7.255977 GGGAAAGGCTATTGAGAGTTTTCTTTT 60.256 37.037 0.00 0.00 32.53 2.27
2668 3035 7.810282 GGAAAGGCTATTGAGAGTTTTCTTTTC 59.190 37.037 0.00 0.00 32.53 2.29
2669 3036 7.823745 AAGGCTATTGAGAGTTTTCTTTTCA 57.176 32.000 0.00 0.00 32.53 2.69
2670 3037 7.446001 AGGCTATTGAGAGTTTTCTTTTCAG 57.554 36.000 0.00 0.00 32.53 3.02
2671 3038 6.432472 AGGCTATTGAGAGTTTTCTTTTCAGG 59.568 38.462 0.00 0.00 32.53 3.86
2672 3039 6.431234 GGCTATTGAGAGTTTTCTTTTCAGGA 59.569 38.462 0.00 0.00 32.53 3.86
2673 3040 7.040409 GGCTATTGAGAGTTTTCTTTTCAGGAA 60.040 37.037 0.00 0.00 32.53 3.36
2674 3041 8.352942 GCTATTGAGAGTTTTCTTTTCAGGAAA 58.647 33.333 0.00 0.00 32.53 3.13
2675 3042 9.670719 CTATTGAGAGTTTTCTTTTCAGGAAAC 57.329 33.333 0.00 0.00 45.83 2.78
2683 3050 8.065557 GTTTTCTTTTCAGGAAACTAATGCAG 57.934 34.615 0.00 0.00 43.13 4.41
2684 3051 5.964958 TCTTTTCAGGAAACTAATGCAGG 57.035 39.130 0.00 0.00 40.21 4.85
2685 3052 5.630121 TCTTTTCAGGAAACTAATGCAGGA 58.370 37.500 0.00 0.00 40.21 3.86
2686 3053 6.068010 TCTTTTCAGGAAACTAATGCAGGAA 58.932 36.000 0.00 0.00 40.21 3.36
2687 3054 5.964958 TTTCAGGAAACTAATGCAGGAAG 57.035 39.130 0.00 0.00 40.21 3.46
2688 3055 4.640771 TCAGGAAACTAATGCAGGAAGT 57.359 40.909 0.00 0.00 40.21 3.01
2689 3056 4.326826 TCAGGAAACTAATGCAGGAAGTG 58.673 43.478 0.00 0.00 40.21 3.16
2690 3057 4.041567 TCAGGAAACTAATGCAGGAAGTGA 59.958 41.667 0.00 0.00 40.21 3.41
2691 3058 4.946157 CAGGAAACTAATGCAGGAAGTGAT 59.054 41.667 0.00 0.00 40.21 3.06
2692 3059 5.416952 CAGGAAACTAATGCAGGAAGTGATT 59.583 40.000 0.00 0.00 40.21 2.57
2693 3060 6.012745 AGGAAACTAATGCAGGAAGTGATTT 58.987 36.000 0.00 0.00 40.61 2.17
2694 3061 6.071728 AGGAAACTAATGCAGGAAGTGATTTG 60.072 38.462 0.00 0.00 40.61 2.32
2695 3062 6.071952 GGAAACTAATGCAGGAAGTGATTTGA 60.072 38.462 0.00 0.00 0.00 2.69
2696 3063 7.363268 GGAAACTAATGCAGGAAGTGATTTGAT 60.363 37.037 0.00 0.00 0.00 2.57
2697 3064 7.472334 AACTAATGCAGGAAGTGATTTGATT 57.528 32.000 0.00 0.00 0.00 2.57
2698 3065 6.860080 ACTAATGCAGGAAGTGATTTGATTG 58.140 36.000 0.00 0.00 0.00 2.67
2699 3066 5.988310 AATGCAGGAAGTGATTTGATTGA 57.012 34.783 0.00 0.00 0.00 2.57
2700 3067 5.578005 ATGCAGGAAGTGATTTGATTGAG 57.422 39.130 0.00 0.00 0.00 3.02
2701 3068 4.401022 TGCAGGAAGTGATTTGATTGAGT 58.599 39.130 0.00 0.00 0.00 3.41
2702 3069 4.828939 TGCAGGAAGTGATTTGATTGAGTT 59.171 37.500 0.00 0.00 0.00 3.01
2703 3070 6.003326 TGCAGGAAGTGATTTGATTGAGTTA 58.997 36.000 0.00 0.00 0.00 2.24
2704 3071 6.489700 TGCAGGAAGTGATTTGATTGAGTTAA 59.510 34.615 0.00 0.00 0.00 2.01
2705 3072 7.177216 TGCAGGAAGTGATTTGATTGAGTTAAT 59.823 33.333 0.00 0.00 0.00 1.40
2706 3073 8.677300 GCAGGAAGTGATTTGATTGAGTTAATA 58.323 33.333 0.00 0.00 0.00 0.98
2707 3074 9.994432 CAGGAAGTGATTTGATTGAGTTAATAC 57.006 33.333 0.00 0.00 0.00 1.89
2708 3075 9.739276 AGGAAGTGATTTGATTGAGTTAATACA 57.261 29.630 0.00 0.00 0.00 2.29
2732 3099 9.393512 ACAAAAGATTTGATTTGGTTTGATTGA 57.606 25.926 9.62 0.00 40.09 2.57
2733 3100 9.872757 CAAAAGATTTGATTTGGTTTGATTGAG 57.127 29.630 0.00 0.00 33.84 3.02
2734 3101 8.611654 AAAGATTTGATTTGGTTTGATTGAGG 57.388 30.769 0.00 0.00 0.00 3.86
2735 3102 7.307131 AGATTTGATTTGGTTTGATTGAGGT 57.693 32.000 0.00 0.00 0.00 3.85
2736 3103 8.421249 AGATTTGATTTGGTTTGATTGAGGTA 57.579 30.769 0.00 0.00 0.00 3.08
2737 3104 8.869109 AGATTTGATTTGGTTTGATTGAGGTAA 58.131 29.630 0.00 0.00 0.00 2.85
2738 3105 9.657419 GATTTGATTTGGTTTGATTGAGGTAAT 57.343 29.630 0.00 0.00 0.00 1.89
2739 3106 8.830201 TTTGATTTGGTTTGATTGAGGTAATG 57.170 30.769 0.00 0.00 0.00 1.90
2740 3107 6.397272 TGATTTGGTTTGATTGAGGTAATGC 58.603 36.000 0.00 0.00 0.00 3.56
2741 3108 5.798125 TTTGGTTTGATTGAGGTAATGCA 57.202 34.783 0.00 0.00 0.00 3.96
2742 3109 5.798125 TTGGTTTGATTGAGGTAATGCAA 57.202 34.783 0.00 0.00 0.00 4.08
2743 3110 5.999205 TGGTTTGATTGAGGTAATGCAAT 57.001 34.783 0.00 0.00 37.43 3.56
2744 3111 6.357579 TGGTTTGATTGAGGTAATGCAATT 57.642 33.333 0.00 0.00 41.28 2.32
2745 3112 7.473735 TGGTTTGATTGAGGTAATGCAATTA 57.526 32.000 0.00 0.00 37.87 1.40
2759 3126 4.839668 TGCAATTACCTTTACACACACC 57.160 40.909 0.00 0.00 0.00 4.16
2760 3127 4.207955 TGCAATTACCTTTACACACACCA 58.792 39.130 0.00 0.00 0.00 4.17
2761 3128 4.645136 TGCAATTACCTTTACACACACCAA 59.355 37.500 0.00 0.00 0.00 3.67
2762 3129 4.979815 GCAATTACCTTTACACACACCAAC 59.020 41.667 0.00 0.00 0.00 3.77
2763 3130 5.209240 CAATTACCTTTACACACACCAACG 58.791 41.667 0.00 0.00 0.00 4.10
2764 3131 1.670791 ACCTTTACACACACCAACGG 58.329 50.000 0.00 0.00 0.00 4.44
2765 3132 1.065272 ACCTTTACACACACCAACGGT 60.065 47.619 0.00 0.00 35.62 4.83
2781 3148 2.415697 CGGTGCCGTTGAAAAAGATT 57.584 45.000 1.93 0.00 34.35 2.40
2782 3149 2.738135 CGGTGCCGTTGAAAAAGATTT 58.262 42.857 1.93 0.00 34.35 2.17
2783 3150 3.120041 CGGTGCCGTTGAAAAAGATTTT 58.880 40.909 1.93 0.00 34.35 1.82
2784 3151 3.060607 CGGTGCCGTTGAAAAAGATTTTG 60.061 43.478 1.93 0.00 34.35 2.44
2785 3152 4.116238 GGTGCCGTTGAAAAAGATTTTGA 58.884 39.130 0.00 0.00 0.00 2.69
2786 3153 4.749598 GGTGCCGTTGAAAAAGATTTTGAT 59.250 37.500 0.00 0.00 0.00 2.57
2787 3154 5.236263 GGTGCCGTTGAAAAAGATTTTGATT 59.764 36.000 0.00 0.00 0.00 2.57
2788 3155 6.238347 GGTGCCGTTGAAAAAGATTTTGATTT 60.238 34.615 0.00 0.00 0.00 2.17
2789 3156 6.628461 GTGCCGTTGAAAAAGATTTTGATTTG 59.372 34.615 0.00 0.00 0.00 2.32
2790 3157 6.536582 TGCCGTTGAAAAAGATTTTGATTTGA 59.463 30.769 0.00 0.00 0.00 2.69
2791 3158 7.226325 TGCCGTTGAAAAAGATTTTGATTTGAT 59.774 29.630 0.00 0.00 0.00 2.57
2792 3159 8.069574 GCCGTTGAAAAAGATTTTGATTTGATT 58.930 29.630 0.00 0.00 0.00 2.57
2793 3160 9.934190 CCGTTGAAAAAGATTTTGATTTGATTT 57.066 25.926 0.00 0.00 0.00 2.17
2811 3178 7.721409 TTGATTTGATTGAATCAATCCAGGA 57.279 32.000 27.26 14.11 46.65 3.86
2812 3179 7.907841 TGATTTGATTGAATCAATCCAGGAT 57.092 32.000 27.26 17.29 46.65 3.24
2813 3180 7.722363 TGATTTGATTGAATCAATCCAGGATG 58.278 34.615 27.26 0.00 46.65 3.51
2824 3191 2.194056 CAGGATGGGCCGAATGCT 59.806 61.111 5.38 5.38 43.43 3.79
2825 3192 1.451504 CAGGATGGGCCGAATGCTA 59.548 57.895 10.21 0.00 43.43 3.49
2826 3193 0.604780 CAGGATGGGCCGAATGCTAG 60.605 60.000 10.21 3.23 43.43 3.42
2827 3194 0.764369 AGGATGGGCCGAATGCTAGA 60.764 55.000 9.03 0.00 43.43 2.43
2828 3195 0.321122 GGATGGGCCGAATGCTAGAG 60.321 60.000 0.00 0.00 40.92 2.43
2829 3196 0.681733 GATGGGCCGAATGCTAGAGA 59.318 55.000 0.00 0.00 40.92 3.10
2830 3197 1.277557 GATGGGCCGAATGCTAGAGAT 59.722 52.381 0.00 0.00 40.92 2.75
2831 3198 1.131638 TGGGCCGAATGCTAGAGATT 58.868 50.000 0.00 0.00 40.92 2.40
2832 3199 2.325484 TGGGCCGAATGCTAGAGATTA 58.675 47.619 0.00 0.00 40.92 1.75
2833 3200 2.906389 TGGGCCGAATGCTAGAGATTAT 59.094 45.455 0.00 0.00 40.92 1.28
2834 3201 4.093743 TGGGCCGAATGCTAGAGATTATA 58.906 43.478 0.00 0.00 40.92 0.98
2835 3202 4.716784 TGGGCCGAATGCTAGAGATTATAT 59.283 41.667 0.00 0.00 40.92 0.86
2836 3203 5.189736 TGGGCCGAATGCTAGAGATTATATT 59.810 40.000 0.00 0.00 40.92 1.28
2837 3204 6.382859 TGGGCCGAATGCTAGAGATTATATTA 59.617 38.462 0.00 0.00 40.92 0.98
2838 3205 6.926272 GGGCCGAATGCTAGAGATTATATTAG 59.074 42.308 0.00 0.00 40.92 1.73
2839 3206 7.418025 GGGCCGAATGCTAGAGATTATATTAGT 60.418 40.741 0.00 0.00 40.92 2.24
2840 3207 7.982354 GGCCGAATGCTAGAGATTATATTAGTT 59.018 37.037 0.00 0.00 40.92 2.24
2847 3214 8.388853 TGCTAGAGATTATATTAGTTAGCGACG 58.611 37.037 0.00 0.00 36.08 5.12
2848 3215 7.851963 GCTAGAGATTATATTAGTTAGCGACGG 59.148 40.741 0.00 0.00 0.00 4.79
2849 3216 6.553524 AGAGATTATATTAGTTAGCGACGGC 58.446 40.000 0.00 0.00 40.37 5.68
2850 3217 6.150641 AGAGATTATATTAGTTAGCGACGGCA 59.849 38.462 0.00 0.00 43.41 5.69
2851 3218 6.091437 AGATTATATTAGTTAGCGACGGCAC 58.909 40.000 0.00 0.00 43.41 5.01
2852 3219 3.720949 ATATTAGTTAGCGACGGCACA 57.279 42.857 0.00 0.00 43.41 4.57
2853 3220 2.596904 ATTAGTTAGCGACGGCACAT 57.403 45.000 0.00 0.00 43.41 3.21
2854 3221 3.720949 ATTAGTTAGCGACGGCACATA 57.279 42.857 0.00 0.00 43.41 2.29
2855 3222 3.720949 TTAGTTAGCGACGGCACATAT 57.279 42.857 0.00 0.00 43.41 1.78
2856 3223 4.834357 TTAGTTAGCGACGGCACATATA 57.166 40.909 0.00 0.00 43.41 0.86
2857 3224 3.009301 AGTTAGCGACGGCACATATAC 57.991 47.619 0.00 0.00 43.41 1.47
2858 3225 2.359848 AGTTAGCGACGGCACATATACA 59.640 45.455 0.00 0.00 43.41 2.29
2859 3226 3.005472 AGTTAGCGACGGCACATATACAT 59.995 43.478 0.00 0.00 43.41 2.29
2860 3227 4.216902 AGTTAGCGACGGCACATATACATA 59.783 41.667 0.00 0.00 43.41 2.29
2861 3228 3.868757 AGCGACGGCACATATACATAT 57.131 42.857 0.00 0.00 43.41 1.78
2862 3229 4.976224 AGCGACGGCACATATACATATA 57.024 40.909 0.00 0.00 43.41 0.86
2863 3230 4.669318 AGCGACGGCACATATACATATAC 58.331 43.478 0.00 0.00 43.41 1.47
2864 3231 3.481028 GCGACGGCACATATACATATACG 59.519 47.826 0.00 0.00 39.62 3.06
2865 3232 3.481028 CGACGGCACATATACATATACGC 59.519 47.826 0.00 0.00 0.00 4.42
2866 3233 3.431856 ACGGCACATATACATATACGCG 58.568 45.455 3.53 3.53 0.00 6.01
2867 3234 3.119743 ACGGCACATATACATATACGCGT 60.120 43.478 19.17 19.17 0.00 6.01
2868 3235 3.855379 CGGCACATATACATATACGCGTT 59.145 43.478 20.78 8.23 0.00 4.84
2869 3236 5.029654 CGGCACATATACATATACGCGTTA 58.970 41.667 20.78 10.44 0.00 3.18
2870 3237 5.512434 CGGCACATATACATATACGCGTTAA 59.488 40.000 20.78 6.33 0.00 2.01
2871 3238 6.033725 CGGCACATATACATATACGCGTTAAA 59.966 38.462 20.78 0.00 0.00 1.52
2872 3239 7.410620 CGGCACATATACATATACGCGTTAAAA 60.411 37.037 20.78 0.00 0.00 1.52
2873 3240 8.222433 GGCACATATACATATACGCGTTAAAAA 58.778 33.333 20.78 0.00 0.00 1.94
2874 3241 9.749490 GCACATATACATATACGCGTTAAAAAT 57.251 29.630 20.78 6.92 0.00 1.82
2880 3247 9.858247 ATACATATACGCGTTAAAAATCAAGTG 57.142 29.630 20.78 4.75 0.00 3.16
2881 3248 7.966111 ACATATACGCGTTAAAAATCAAGTGA 58.034 30.769 20.78 0.00 0.00 3.41
2882 3249 8.114290 ACATATACGCGTTAAAAATCAAGTGAG 58.886 33.333 20.78 0.00 0.00 3.51
2883 3250 4.806342 ACGCGTTAAAAATCAAGTGAGT 57.194 36.364 5.58 0.00 0.00 3.41
2884 3251 5.164606 ACGCGTTAAAAATCAAGTGAGTT 57.835 34.783 5.58 0.00 33.37 3.01
2885 3252 5.575019 ACGCGTTAAAAATCAAGTGAGTTT 58.425 33.333 5.58 1.09 43.12 2.66
2887 3254 6.528774 ACGCGTTAAAAATCAAGTGAGTTTTT 59.471 30.769 20.51 16.48 46.11 1.94
2888 3255 7.697291 ACGCGTTAAAAATCAAGTGAGTTTTTA 59.303 29.630 20.51 11.73 46.11 1.52
2889 3256 8.687301 CGCGTTAAAAATCAAGTGAGTTTTTAT 58.313 29.630 20.51 4.07 46.11 1.40
2899 3266 9.793252 ATCAAGTGAGTTTTTATATGCAATCAC 57.207 29.630 0.00 0.00 36.84 3.06
2900 3267 8.243426 TCAAGTGAGTTTTTATATGCAATCACC 58.757 33.333 0.00 0.00 37.18 4.02
2901 3268 7.944729 AGTGAGTTTTTATATGCAATCACCT 57.055 32.000 0.00 0.00 37.18 4.00
2902 3269 8.353423 AGTGAGTTTTTATATGCAATCACCTT 57.647 30.769 0.00 0.00 37.18 3.50
2903 3270 8.806146 AGTGAGTTTTTATATGCAATCACCTTT 58.194 29.630 0.00 0.00 37.18 3.11
2911 3278 9.914834 TTTATATGCAATCACCTTTACTTACCT 57.085 29.630 0.00 0.00 0.00 3.08
2912 3279 7.807977 ATATGCAATCACCTTTACTTACCTG 57.192 36.000 0.00 0.00 0.00 4.00
2913 3280 3.756434 TGCAATCACCTTTACTTACCTGC 59.244 43.478 0.00 0.00 0.00 4.85
2914 3281 3.128764 GCAATCACCTTTACTTACCTGCC 59.871 47.826 0.00 0.00 0.00 4.85
2915 3282 4.589908 CAATCACCTTTACTTACCTGCCT 58.410 43.478 0.00 0.00 0.00 4.75
2916 3283 3.975168 TCACCTTTACTTACCTGCCTC 57.025 47.619 0.00 0.00 0.00 4.70
2917 3284 3.517612 TCACCTTTACTTACCTGCCTCT 58.482 45.455 0.00 0.00 0.00 3.69
2918 3285 3.514309 TCACCTTTACTTACCTGCCTCTC 59.486 47.826 0.00 0.00 0.00 3.20
2919 3286 2.838813 ACCTTTACTTACCTGCCTCTCC 59.161 50.000 0.00 0.00 0.00 3.71
2920 3287 2.838202 CCTTTACTTACCTGCCTCTCCA 59.162 50.000 0.00 0.00 0.00 3.86
2921 3288 3.456277 CCTTTACTTACCTGCCTCTCCAT 59.544 47.826 0.00 0.00 0.00 3.41
2922 3289 4.080299 CCTTTACTTACCTGCCTCTCCATT 60.080 45.833 0.00 0.00 0.00 3.16
2923 3290 5.130477 CCTTTACTTACCTGCCTCTCCATTA 59.870 44.000 0.00 0.00 0.00 1.90
2924 3291 6.183361 CCTTTACTTACCTGCCTCTCCATTAT 60.183 42.308 0.00 0.00 0.00 1.28
2925 3292 6.824958 TTACTTACCTGCCTCTCCATTATT 57.175 37.500 0.00 0.00 0.00 1.40
2926 3293 7.924358 TTACTTACCTGCCTCTCCATTATTA 57.076 36.000 0.00 0.00 0.00 0.98
2927 3294 6.824958 ACTTACCTGCCTCTCCATTATTAA 57.175 37.500 0.00 0.00 0.00 1.40
2928 3295 7.394144 ACTTACCTGCCTCTCCATTATTAAT 57.606 36.000 0.00 0.00 0.00 1.40
2929 3296 7.227156 ACTTACCTGCCTCTCCATTATTAATG 58.773 38.462 9.09 9.09 38.63 1.90
2930 3297 5.653255 ACCTGCCTCTCCATTATTAATGT 57.347 39.130 13.87 0.00 37.18 2.71
2931 3298 5.380043 ACCTGCCTCTCCATTATTAATGTG 58.620 41.667 13.87 7.64 37.18 3.21
2932 3299 5.132648 ACCTGCCTCTCCATTATTAATGTGA 59.867 40.000 13.87 10.71 37.18 3.58
2933 3300 6.183361 ACCTGCCTCTCCATTATTAATGTGAT 60.183 38.462 13.87 0.00 37.18 3.06
2934 3301 6.373774 CCTGCCTCTCCATTATTAATGTGATC 59.626 42.308 13.87 8.05 37.18 2.92
2935 3302 5.934043 TGCCTCTCCATTATTAATGTGATCG 59.066 40.000 13.87 7.24 37.18 3.69
2936 3303 5.934625 GCCTCTCCATTATTAATGTGATCGT 59.065 40.000 13.87 0.00 37.18 3.73
2937 3304 6.128445 GCCTCTCCATTATTAATGTGATCGTG 60.128 42.308 13.87 2.03 37.18 4.35
2938 3305 6.931281 CCTCTCCATTATTAATGTGATCGTGT 59.069 38.462 13.87 0.00 37.18 4.49
2939 3306 8.088365 CCTCTCCATTATTAATGTGATCGTGTA 58.912 37.037 13.87 0.00 37.18 2.90
2940 3307 8.812147 TCTCCATTATTAATGTGATCGTGTAC 57.188 34.615 13.87 0.00 37.18 2.90
2941 3308 8.638873 TCTCCATTATTAATGTGATCGTGTACT 58.361 33.333 13.87 0.00 37.18 2.73
2942 3309 9.908152 CTCCATTATTAATGTGATCGTGTACTA 57.092 33.333 13.87 0.00 37.18 1.82
2952 3319 9.817809 AATGTGATCGTGTACTAAAATGTAGAT 57.182 29.630 0.00 0.00 0.00 1.98
2953 3320 9.817809 ATGTGATCGTGTACTAAAATGTAGATT 57.182 29.630 0.00 0.00 0.00 2.40
2954 3321 9.647797 TGTGATCGTGTACTAAAATGTAGATTT 57.352 29.630 0.00 0.00 32.87 2.17
2959 3326 9.624697 TCGTGTACTAAAATGTAGATTTTACGT 57.375 29.630 20.50 18.49 41.22 3.57
2960 3327 9.666163 CGTGTACTAAAATGTAGATTTTACGTG 57.334 33.333 12.45 7.27 41.22 4.49
2978 3345 8.876275 TTTACGTGATAATAACTTTATCGGCT 57.124 30.769 0.00 0.00 34.88 5.52
2979 3346 8.876275 TTACGTGATAATAACTTTATCGGCTT 57.124 30.769 0.00 0.00 34.88 4.35
2980 3347 9.964303 TTACGTGATAATAACTTTATCGGCTTA 57.036 29.630 0.00 0.00 34.88 3.09
2982 3349 9.136952 ACGTGATAATAACTTTATCGGCTTATC 57.863 33.333 0.00 0.00 34.88 1.75
2983 3350 9.135843 CGTGATAATAACTTTATCGGCTTATCA 57.864 33.333 0.00 0.00 34.88 2.15
2991 3358 6.786207 ACTTTATCGGCTTATCAAAGAAAGC 58.214 36.000 0.00 0.00 45.88 3.51
3002 3369 9.631452 GCTTATCAAAGAAAGCAGAAGTTTATT 57.369 29.630 2.35 0.00 45.89 1.40
3005 3372 8.822652 ATCAAAGAAAGCAGAAGTTTATTTGG 57.177 30.769 12.62 0.31 42.39 3.28
3006 3373 7.781056 TCAAAGAAAGCAGAAGTTTATTTGGT 58.219 30.769 12.62 0.00 42.39 3.67
3007 3374 8.257306 TCAAAGAAAGCAGAAGTTTATTTGGTT 58.743 29.630 12.62 0.00 42.39 3.67
3008 3375 9.528018 CAAAGAAAGCAGAAGTTTATTTGGTTA 57.472 29.630 7.30 0.00 40.19 2.85
3009 3376 9.750125 AAAGAAAGCAGAAGTTTATTTGGTTAG 57.250 29.630 0.00 0.00 29.49 2.34
3010 3377 8.465273 AGAAAGCAGAAGTTTATTTGGTTAGT 57.535 30.769 0.00 0.00 31.71 2.24
3011 3378 9.569122 AGAAAGCAGAAGTTTATTTGGTTAGTA 57.431 29.630 0.00 0.00 31.71 1.82
3259 3632 3.779183 TCATCTTGAGAAGCTCCTCCAAT 59.221 43.478 0.00 0.00 32.32 3.16
3289 3664 7.202130 CCTGTGGGAAAAATATGAGGAGATAGA 60.202 40.741 0.00 0.00 33.58 1.98
3303 3678 8.956446 TGAGGAGATAGATGTTCCATATGTTA 57.044 34.615 1.24 0.00 33.32 2.41
3304 3679 9.552695 TGAGGAGATAGATGTTCCATATGTTAT 57.447 33.333 1.24 0.00 33.32 1.89
3540 3919 7.074653 ACCTGTAAAGTAAACTCATGAAGGA 57.925 36.000 8.32 0.00 0.00 3.36
3570 3949 8.687292 AGAGTGTAATATGATGCATTGAACAT 57.313 30.769 0.00 1.93 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 1.266446 TGCCGATTGTGTTGTGATGTG 59.734 47.619 0.00 0.00 0.00 3.21
209 219 0.184933 AGCCCTTAGTGGTGTTTGCA 59.815 50.000 0.00 0.00 0.00 4.08
309 319 4.051237 AGGTTTACGTTGACTCGGTAAAC 58.949 43.478 14.40 14.40 37.04 2.01
323 333 3.437741 AGAACGGGCAAATTAGGTTTACG 59.562 43.478 0.00 0.00 0.00 3.18
361 371 2.163818 TGTCCTACACTGGCTTTTCG 57.836 50.000 0.00 0.00 0.00 3.46
393 403 3.247648 GCGACCGCTGTGAATGTTAATAT 59.752 43.478 7.19 0.00 38.26 1.28
423 434 2.813908 GGACGCCGCGTTCAGATT 60.814 61.111 21.18 0.00 41.37 2.40
455 466 2.925724 ACGGAGAGAGTACTGATGAGG 58.074 52.381 0.00 0.00 0.00 3.86
460 471 7.463961 AATAAAGAAACGGAGAGAGTACTGA 57.536 36.000 0.00 0.00 0.00 3.41
555 566 8.948631 ATCAACATTCACACTACGAAATCTAT 57.051 30.769 0.00 0.00 0.00 1.98
556 567 9.297586 GTATCAACATTCACACTACGAAATCTA 57.702 33.333 0.00 0.00 0.00 1.98
557 568 7.277981 GGTATCAACATTCACACTACGAAATCT 59.722 37.037 0.00 0.00 0.00 2.40
558 569 7.277981 AGGTATCAACATTCACACTACGAAATC 59.722 37.037 0.00 0.00 0.00 2.17
559 570 7.103641 AGGTATCAACATTCACACTACGAAAT 58.896 34.615 0.00 0.00 0.00 2.17
560 571 6.460781 AGGTATCAACATTCACACTACGAAA 58.539 36.000 0.00 0.00 0.00 3.46
561 572 6.032956 AGGTATCAACATTCACACTACGAA 57.967 37.500 0.00 0.00 0.00 3.85
562 573 5.654603 AGGTATCAACATTCACACTACGA 57.345 39.130 0.00 0.00 0.00 3.43
563 574 6.721571 AAAGGTATCAACATTCACACTACG 57.278 37.500 0.00 0.00 0.00 3.51
564 575 8.784043 AGAAAAAGGTATCAACATTCACACTAC 58.216 33.333 0.00 0.00 0.00 2.73
565 576 8.918202 AGAAAAAGGTATCAACATTCACACTA 57.082 30.769 0.00 0.00 0.00 2.74
566 577 7.823745 AGAAAAAGGTATCAACATTCACACT 57.176 32.000 0.00 0.00 0.00 3.55
567 578 7.744715 CGTAGAAAAAGGTATCAACATTCACAC 59.255 37.037 0.00 0.00 0.00 3.82
568 579 7.658167 TCGTAGAAAAAGGTATCAACATTCACA 59.342 33.333 0.00 0.00 0.00 3.58
569 580 8.025243 TCGTAGAAAAAGGTATCAACATTCAC 57.975 34.615 0.00 0.00 0.00 3.18
570 581 8.610248 TTCGTAGAAAAAGGTATCAACATTCA 57.390 30.769 0.00 0.00 45.90 2.57
571 582 8.718734 ACTTCGTAGAAAAAGGTATCAACATTC 58.281 33.333 0.00 0.00 45.90 2.67
572 583 8.617290 ACTTCGTAGAAAAAGGTATCAACATT 57.383 30.769 0.00 0.00 45.90 2.71
573 584 8.617290 AACTTCGTAGAAAAAGGTATCAACAT 57.383 30.769 0.00 0.00 45.90 2.71
574 585 9.715121 ATAACTTCGTAGAAAAAGGTATCAACA 57.285 29.630 0.00 0.00 45.90 3.33
577 588 9.932207 TGAATAACTTCGTAGAAAAAGGTATCA 57.068 29.630 0.00 0.00 45.90 2.15
581 592 9.117183 AGTTTGAATAACTTCGTAGAAAAAGGT 57.883 29.630 0.00 0.00 45.90 3.50
582 593 9.946165 AAGTTTGAATAACTTCGTAGAAAAAGG 57.054 29.630 0.00 0.00 45.90 3.11
586 597 9.925268 GTCAAAGTTTGAATAACTTCGTAGAAA 57.075 29.630 19.63 0.00 41.63 2.52
587 598 9.321562 AGTCAAAGTTTGAATAACTTCGTAGAA 57.678 29.630 19.63 0.00 41.63 2.10
588 599 8.882415 AGTCAAAGTTTGAATAACTTCGTAGA 57.118 30.769 19.63 0.00 42.15 2.59
589 600 9.931210 AAAGTCAAAGTTTGAATAACTTCGTAG 57.069 29.630 19.63 0.00 42.15 3.51
590 601 9.710979 CAAAGTCAAAGTTTGAATAACTTCGTA 57.289 29.630 19.63 0.00 40.11 3.43
591 602 8.455682 TCAAAGTCAAAGTTTGAATAACTTCGT 58.544 29.630 19.63 3.64 42.62 3.85
592 603 8.734030 GTCAAAGTCAAAGTTTGAATAACTTCG 58.266 33.333 19.63 9.21 45.77 3.79
593 604 9.020813 GGTCAAAGTCAAAGTTTGAATAACTTC 57.979 33.333 19.63 6.00 45.77 3.01
594 605 8.527810 TGGTCAAAGTCAAAGTTTGAATAACTT 58.472 29.630 19.63 15.41 45.77 2.66
595 606 8.062065 TGGTCAAAGTCAAAGTTTGAATAACT 57.938 30.769 19.63 10.44 45.77 2.24
596 607 8.696410 TTGGTCAAAGTCAAAGTTTGAATAAC 57.304 30.769 19.63 15.85 45.77 1.89
597 608 9.883142 ATTTGGTCAAAGTCAAAGTTTGAATAA 57.117 25.926 19.63 8.48 45.77 1.40
598 609 9.528018 GATTTGGTCAAAGTCAAAGTTTGAATA 57.472 29.630 19.63 1.44 45.77 1.75
599 610 8.260114 AGATTTGGTCAAAGTCAAAGTTTGAAT 58.740 29.630 19.63 16.09 45.77 2.57
600 611 7.610865 AGATTTGGTCAAAGTCAAAGTTTGAA 58.389 30.769 19.63 1.30 45.77 2.69
601 612 7.169158 AGATTTGGTCAAAGTCAAAGTTTGA 57.831 32.000 14.35 14.35 43.15 2.69
602 613 7.832503 AAGATTTGGTCAAAGTCAAAGTTTG 57.167 32.000 9.44 9.44 39.30 2.93
606 617 9.294030 GCATATAAGATTTGGTCAAAGTCAAAG 57.706 33.333 2.55 0.00 36.49 2.77
607 618 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
608 619 8.347004 TGCATATAAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
609 620 7.936496 TGCATATAAGATTTGGTCAAAGTCA 57.064 32.000 2.55 0.00 33.32 3.41
610 621 9.076596 GTTTGCATATAAGATTTGGTCAAAGTC 57.923 33.333 2.55 1.51 33.32 3.01
611 622 8.806146 AGTTTGCATATAAGATTTGGTCAAAGT 58.194 29.630 2.55 0.00 33.32 2.66
625 636 9.834628 CTCCGTTTCTTTTTAGTTTGCATATAA 57.165 29.630 0.00 0.00 0.00 0.98
627 638 7.312899 CCTCCGTTTCTTTTTAGTTTGCATAT 58.687 34.615 0.00 0.00 0.00 1.78
633 644 5.443283 AGTCCCTCCGTTTCTTTTTAGTTT 58.557 37.500 0.00 0.00 0.00 2.66
639 650 4.837298 ACTACTAGTCCCTCCGTTTCTTTT 59.163 41.667 0.00 0.00 0.00 2.27
641 652 3.762823 CACTACTAGTCCCTCCGTTTCTT 59.237 47.826 0.00 0.00 0.00 2.52
642 653 3.245193 ACACTACTAGTCCCTCCGTTTCT 60.245 47.826 0.00 0.00 0.00 2.52
643 654 3.087781 ACACTACTAGTCCCTCCGTTTC 58.912 50.000 0.00 0.00 0.00 2.78
644 655 2.824341 CACACTACTAGTCCCTCCGTTT 59.176 50.000 0.00 0.00 0.00 3.60
645 656 2.040813 TCACACTACTAGTCCCTCCGTT 59.959 50.000 0.00 0.00 0.00 4.44
647 658 2.414994 TCACACTACTAGTCCCTCCG 57.585 55.000 0.00 0.00 0.00 4.63
648 659 4.024670 ACATTCACACTACTAGTCCCTCC 58.975 47.826 0.00 0.00 0.00 4.30
649 660 5.185249 TCAACATTCACACTACTAGTCCCTC 59.815 44.000 0.00 0.00 0.00 4.30
650 661 5.084519 TCAACATTCACACTACTAGTCCCT 58.915 41.667 0.00 0.00 0.00 4.20
651 662 5.401531 TCAACATTCACACTACTAGTCCC 57.598 43.478 0.00 0.00 0.00 4.46
652 663 8.634444 AGATATCAACATTCACACTACTAGTCC 58.366 37.037 0.00 0.00 0.00 3.85
657 668 9.950496 AGAAAAGATATCAACATTCACACTACT 57.050 29.630 5.32 0.00 0.00 2.57
659 670 9.942850 TGAGAAAAGATATCAACATTCACACTA 57.057 29.630 5.32 0.00 0.00 2.74
660 671 8.725148 GTGAGAAAAGATATCAACATTCACACT 58.275 33.333 20.04 0.00 36.29 3.55
661 672 8.506437 TGTGAGAAAAGATATCAACATTCACAC 58.494 33.333 19.56 19.94 37.05 3.82
662 673 8.620116 TGTGAGAAAAGATATCAACATTCACA 57.380 30.769 19.56 19.56 38.91 3.58
663 674 9.897744 TTTGTGAGAAAAGATATCAACATTCAC 57.102 29.630 16.38 16.38 33.66 3.18
694 705 9.874205 AAGATTTGATCAAAGTCAAAGTTTGAA 57.126 25.926 24.17 4.68 46.76 2.69
720 731 8.462811 TCGCCATTTCTTTTTAGTTTGCATATA 58.537 29.630 0.00 0.00 0.00 0.86
726 737 6.438763 ACTCTCGCCATTTCTTTTTAGTTTG 58.561 36.000 0.00 0.00 0.00 2.93
727 738 6.635030 ACTCTCGCCATTTCTTTTTAGTTT 57.365 33.333 0.00 0.00 0.00 2.66
729 740 6.465084 AGTACTCTCGCCATTTCTTTTTAGT 58.535 36.000 0.00 0.00 0.00 2.24
730 741 6.969828 AGTACTCTCGCCATTTCTTTTTAG 57.030 37.500 0.00 0.00 0.00 1.85
731 742 7.609056 ACTAGTACTCTCGCCATTTCTTTTTA 58.391 34.615 0.00 0.00 0.00 1.52
734 745 5.662674 ACTAGTACTCTCGCCATTTCTTT 57.337 39.130 0.00 0.00 0.00 2.52
735 746 6.546403 TGATACTAGTACTCTCGCCATTTCTT 59.454 38.462 4.31 0.00 0.00 2.52
737 748 6.315091 TGATACTAGTACTCTCGCCATTTC 57.685 41.667 4.31 0.00 0.00 2.17
739 750 5.277876 CGTTGATACTAGTACTCTCGCCATT 60.278 44.000 4.31 0.00 0.00 3.16
741 752 3.558829 CGTTGATACTAGTACTCTCGCCA 59.441 47.826 4.31 0.00 0.00 5.69
744 755 4.605793 GCGTCGTTGATACTAGTACTCTCG 60.606 50.000 4.31 8.58 0.00 4.04
751 762 1.202268 GGCAGCGTCGTTGATACTAGT 60.202 52.381 13.70 0.00 0.00 2.57
752 763 1.202256 TGGCAGCGTCGTTGATACTAG 60.202 52.381 13.70 0.00 0.00 2.57
765 943 3.494336 GCAGCAGTAGTGGCAGCG 61.494 66.667 0.00 0.00 34.12 5.18
839 1026 0.519077 GCTGGACACTTTGCTACTGC 59.481 55.000 0.00 0.00 40.20 4.40
840 1027 1.160137 GGCTGGACACTTTGCTACTG 58.840 55.000 0.00 0.00 0.00 2.74
842 1029 0.960861 GGGGCTGGACACTTTGCTAC 60.961 60.000 0.00 0.00 0.00 3.58
843 1030 1.378762 GGGGCTGGACACTTTGCTA 59.621 57.895 0.00 0.00 0.00 3.49
850 1038 2.609610 TAGGTGGGGGCTGGACAC 60.610 66.667 0.00 0.00 0.00 3.67
1026 1234 2.616524 TCCTGGTACAAGCAAGGTACT 58.383 47.619 10.92 0.00 40.67 2.73
1027 1235 3.007614 TCTTCCTGGTACAAGCAAGGTAC 59.992 47.826 0.91 4.55 38.70 3.34
1101 1361 6.819397 AGTGGGTAAAAGAATGAGCTTAAC 57.181 37.500 0.00 0.00 0.00 2.01
1120 1380 0.518636 CATGCCGACAGTGAAAGTGG 59.481 55.000 0.00 0.00 43.12 4.00
1135 1401 0.097674 GTGCACGGTGATCTTCATGC 59.902 55.000 13.29 0.00 0.00 4.06
1448 1723 2.181777 GGCATGACGCTGACGAGA 59.818 61.111 0.00 0.00 43.93 4.04
1487 1768 3.324930 CTGGGGTGCAGGCTGAGA 61.325 66.667 20.86 0.00 0.00 3.27
2039 2347 1.296392 CCAGAGGATGACGTTGCCA 59.704 57.895 0.00 0.00 0.00 4.92
2069 2377 2.918802 AGTTCACCCGCCGTGGTA 60.919 61.111 0.00 0.00 43.23 3.25
2091 2399 4.329545 GTGCTTCACCGGCCTGGA 62.330 66.667 18.74 2.29 42.00 3.86
2472 2794 0.937304 GCACATGGCAGGTATACGTG 59.063 55.000 18.97 18.97 43.97 4.49
2473 2795 2.854114 TGGCACATGGCAGGTATACGT 61.854 52.381 3.74 0.00 46.12 3.57
2474 2796 0.179059 TGGCACATGGCAGGTATACG 60.179 55.000 3.74 0.00 46.12 3.06
2475 2797 3.798794 TGGCACATGGCAGGTATAC 57.201 52.632 3.74 0.00 46.12 1.47
2492 2818 3.250762 CCGATACCAGGCACACATTATTG 59.749 47.826 0.00 0.00 0.00 1.90
2493 2819 3.476552 CCGATACCAGGCACACATTATT 58.523 45.455 0.00 0.00 0.00 1.40
2494 2820 3.126001 CCGATACCAGGCACACATTAT 57.874 47.619 0.00 0.00 0.00 1.28
2510 2836 3.147629 ACTAGCTATACGTTGAGCCGAT 58.852 45.455 15.51 3.17 39.65 4.18
2546 2906 8.423349 TGGACAATTGAATCAAGAACTTCAAAT 58.577 29.630 13.59 0.00 42.72 2.32
2628 2995 3.769300 AGCCTTTCCCGCAAAAATATTCT 59.231 39.130 0.00 0.00 0.00 2.40
2629 2996 4.123497 AGCCTTTCCCGCAAAAATATTC 57.877 40.909 0.00 0.00 0.00 1.75
2638 3005 0.908910 TCTCAATAGCCTTTCCCGCA 59.091 50.000 0.00 0.00 0.00 5.69
2639 3006 1.134371 ACTCTCAATAGCCTTTCCCGC 60.134 52.381 0.00 0.00 0.00 6.13
2640 3007 2.990066 ACTCTCAATAGCCTTTCCCG 57.010 50.000 0.00 0.00 0.00 5.14
2641 3008 5.257262 AGAAAACTCTCAATAGCCTTTCCC 58.743 41.667 0.00 0.00 0.00 3.97
2642 3009 6.825944 AAGAAAACTCTCAATAGCCTTTCC 57.174 37.500 0.00 0.00 0.00 3.13
2643 3010 8.352942 TGAAAAGAAAACTCTCAATAGCCTTTC 58.647 33.333 0.00 0.00 0.00 2.62
2644 3011 8.237811 TGAAAAGAAAACTCTCAATAGCCTTT 57.762 30.769 0.00 0.00 0.00 3.11
2645 3012 7.040132 CCTGAAAAGAAAACTCTCAATAGCCTT 60.040 37.037 0.00 0.00 0.00 4.35
2646 3013 6.432472 CCTGAAAAGAAAACTCTCAATAGCCT 59.568 38.462 0.00 0.00 0.00 4.58
2647 3014 6.431234 TCCTGAAAAGAAAACTCTCAATAGCC 59.569 38.462 0.00 0.00 0.00 3.93
2648 3015 7.440523 TCCTGAAAAGAAAACTCTCAATAGC 57.559 36.000 0.00 0.00 0.00 2.97
2649 3016 9.670719 GTTTCCTGAAAAGAAAACTCTCAATAG 57.329 33.333 0.00 0.00 35.13 1.73
2650 3017 9.408648 AGTTTCCTGAAAAGAAAACTCTCAATA 57.591 29.630 0.00 0.00 35.13 1.90
2651 3018 8.298729 AGTTTCCTGAAAAGAAAACTCTCAAT 57.701 30.769 0.00 0.00 35.13 2.57
2652 3019 7.703058 AGTTTCCTGAAAAGAAAACTCTCAA 57.297 32.000 0.00 0.00 35.13 3.02
2653 3020 8.801882 TTAGTTTCCTGAAAAGAAAACTCTCA 57.198 30.769 2.88 0.00 35.13 3.27
2654 3021 9.670719 CATTAGTTTCCTGAAAAGAAAACTCTC 57.329 33.333 2.88 0.00 35.13 3.20
2655 3022 8.138074 GCATTAGTTTCCTGAAAAGAAAACTCT 58.862 33.333 2.88 0.00 35.13 3.24
2656 3023 7.920682 TGCATTAGTTTCCTGAAAAGAAAACTC 59.079 33.333 2.88 0.00 35.13 3.01
2657 3024 7.781056 TGCATTAGTTTCCTGAAAAGAAAACT 58.219 30.769 4.91 4.91 35.13 2.66
2658 3025 7.169813 CCTGCATTAGTTTCCTGAAAAGAAAAC 59.830 37.037 0.00 0.00 35.13 2.43
2659 3026 7.069331 TCCTGCATTAGTTTCCTGAAAAGAAAA 59.931 33.333 0.00 0.00 35.13 2.29
2660 3027 6.549364 TCCTGCATTAGTTTCCTGAAAAGAAA 59.451 34.615 0.00 0.00 31.33 2.52
2661 3028 6.068010 TCCTGCATTAGTTTCCTGAAAAGAA 58.932 36.000 0.00 0.00 31.33 2.52
2662 3029 5.630121 TCCTGCATTAGTTTCCTGAAAAGA 58.370 37.500 0.00 0.00 31.33 2.52
2663 3030 5.964958 TCCTGCATTAGTTTCCTGAAAAG 57.035 39.130 0.00 0.00 31.33 2.27
2664 3031 5.833131 ACTTCCTGCATTAGTTTCCTGAAAA 59.167 36.000 0.00 0.00 31.33 2.29
2665 3032 5.241506 CACTTCCTGCATTAGTTTCCTGAAA 59.758 40.000 0.00 0.00 0.00 2.69
2666 3033 4.761739 CACTTCCTGCATTAGTTTCCTGAA 59.238 41.667 0.00 0.00 0.00 3.02
2667 3034 4.041567 TCACTTCCTGCATTAGTTTCCTGA 59.958 41.667 0.00 0.00 0.00 3.86
2668 3035 4.326826 TCACTTCCTGCATTAGTTTCCTG 58.673 43.478 0.00 0.00 0.00 3.86
2669 3036 4.640771 TCACTTCCTGCATTAGTTTCCT 57.359 40.909 0.00 0.00 0.00 3.36
2670 3037 5.904362 AATCACTTCCTGCATTAGTTTCC 57.096 39.130 0.00 0.00 0.00 3.13
2671 3038 6.913170 TCAAATCACTTCCTGCATTAGTTTC 58.087 36.000 0.00 0.00 0.00 2.78
2672 3039 6.899393 TCAAATCACTTCCTGCATTAGTTT 57.101 33.333 0.00 0.00 0.00 2.66
2673 3040 7.177216 TCAATCAAATCACTTCCTGCATTAGTT 59.823 33.333 0.00 0.00 0.00 2.24
2674 3041 6.660521 TCAATCAAATCACTTCCTGCATTAGT 59.339 34.615 0.00 0.00 0.00 2.24
2675 3042 7.092137 TCAATCAAATCACTTCCTGCATTAG 57.908 36.000 0.00 0.00 0.00 1.73
2676 3043 6.660521 ACTCAATCAAATCACTTCCTGCATTA 59.339 34.615 0.00 0.00 0.00 1.90
2677 3044 5.479375 ACTCAATCAAATCACTTCCTGCATT 59.521 36.000 0.00 0.00 0.00 3.56
2678 3045 5.014858 ACTCAATCAAATCACTTCCTGCAT 58.985 37.500 0.00 0.00 0.00 3.96
2679 3046 4.401022 ACTCAATCAAATCACTTCCTGCA 58.599 39.130 0.00 0.00 0.00 4.41
2680 3047 5.382618 AACTCAATCAAATCACTTCCTGC 57.617 39.130 0.00 0.00 0.00 4.85
2681 3048 9.994432 GTATTAACTCAATCAAATCACTTCCTG 57.006 33.333 0.00 0.00 0.00 3.86
2682 3049 9.739276 TGTATTAACTCAATCAAATCACTTCCT 57.261 29.630 0.00 0.00 0.00 3.36
2706 3073 9.393512 TCAATCAAACCAAATCAAATCTTTTGT 57.606 25.926 0.39 0.00 32.23 2.83
2707 3074 9.872757 CTCAATCAAACCAAATCAAATCTTTTG 57.127 29.630 0.00 0.00 33.58 2.44
2708 3075 9.059260 CCTCAATCAAACCAAATCAAATCTTTT 57.941 29.630 0.00 0.00 0.00 2.27
2709 3076 8.212995 ACCTCAATCAAACCAAATCAAATCTTT 58.787 29.630 0.00 0.00 0.00 2.52
2710 3077 7.738847 ACCTCAATCAAACCAAATCAAATCTT 58.261 30.769 0.00 0.00 0.00 2.40
2711 3078 7.307131 ACCTCAATCAAACCAAATCAAATCT 57.693 32.000 0.00 0.00 0.00 2.40
2712 3079 9.657419 ATTACCTCAATCAAACCAAATCAAATC 57.343 29.630 0.00 0.00 0.00 2.17
2713 3080 9.439500 CATTACCTCAATCAAACCAAATCAAAT 57.561 29.630 0.00 0.00 0.00 2.32
2714 3081 7.387397 GCATTACCTCAATCAAACCAAATCAAA 59.613 33.333 0.00 0.00 0.00 2.69
2715 3082 6.873076 GCATTACCTCAATCAAACCAAATCAA 59.127 34.615 0.00 0.00 0.00 2.57
2716 3083 6.014755 TGCATTACCTCAATCAAACCAAATCA 60.015 34.615 0.00 0.00 0.00 2.57
2717 3084 6.397272 TGCATTACCTCAATCAAACCAAATC 58.603 36.000 0.00 0.00 0.00 2.17
2718 3085 6.357579 TGCATTACCTCAATCAAACCAAAT 57.642 33.333 0.00 0.00 0.00 2.32
2719 3086 5.798125 TGCATTACCTCAATCAAACCAAA 57.202 34.783 0.00 0.00 0.00 3.28
2720 3087 5.798125 TTGCATTACCTCAATCAAACCAA 57.202 34.783 0.00 0.00 0.00 3.67
2721 3088 5.999205 ATTGCATTACCTCAATCAAACCA 57.001 34.783 0.00 0.00 0.00 3.67
2722 3089 7.755582 GTAATTGCATTACCTCAATCAAACC 57.244 36.000 0.00 0.00 39.30 3.27
2734 3101 6.804783 GGTGTGTGTAAAGGTAATTGCATTAC 59.195 38.462 11.79 11.79 43.34 1.89
2735 3102 6.490381 TGGTGTGTGTAAAGGTAATTGCATTA 59.510 34.615 0.00 0.00 0.00 1.90
2736 3103 5.303078 TGGTGTGTGTAAAGGTAATTGCATT 59.697 36.000 0.00 0.00 0.00 3.56
2737 3104 4.830046 TGGTGTGTGTAAAGGTAATTGCAT 59.170 37.500 0.00 0.00 0.00 3.96
2738 3105 4.207955 TGGTGTGTGTAAAGGTAATTGCA 58.792 39.130 0.00 0.00 0.00 4.08
2739 3106 4.839668 TGGTGTGTGTAAAGGTAATTGC 57.160 40.909 0.00 0.00 0.00 3.56
2740 3107 5.209240 CGTTGGTGTGTGTAAAGGTAATTG 58.791 41.667 0.00 0.00 0.00 2.32
2741 3108 4.276431 CCGTTGGTGTGTGTAAAGGTAATT 59.724 41.667 0.00 0.00 0.00 1.40
2742 3109 3.816523 CCGTTGGTGTGTGTAAAGGTAAT 59.183 43.478 0.00 0.00 0.00 1.89
2743 3110 3.204526 CCGTTGGTGTGTGTAAAGGTAA 58.795 45.455 0.00 0.00 0.00 2.85
2744 3111 2.170187 ACCGTTGGTGTGTGTAAAGGTA 59.830 45.455 0.00 0.00 35.03 3.08
2745 3112 1.065272 ACCGTTGGTGTGTGTAAAGGT 60.065 47.619 0.00 0.00 32.98 3.50
2746 3113 1.670791 ACCGTTGGTGTGTGTAAAGG 58.329 50.000 0.00 0.00 32.98 3.11
2762 3129 2.415697 AATCTTTTTCAACGGCACCG 57.584 45.000 7.71 7.71 46.03 4.94
2763 3130 4.116238 TCAAAATCTTTTTCAACGGCACC 58.884 39.130 0.00 0.00 0.00 5.01
2764 3131 5.905480 ATCAAAATCTTTTTCAACGGCAC 57.095 34.783 0.00 0.00 0.00 5.01
2765 3132 6.536582 TCAAATCAAAATCTTTTTCAACGGCA 59.463 30.769 0.00 0.00 0.00 5.69
2766 3133 6.942891 TCAAATCAAAATCTTTTTCAACGGC 58.057 32.000 0.00 0.00 0.00 5.68
2767 3134 9.934190 AAATCAAATCAAAATCTTTTTCAACGG 57.066 25.926 0.00 0.00 0.00 4.44
2794 3161 3.257624 GCCCATCCTGGATTGATTCAATC 59.742 47.826 24.94 24.94 46.52 2.67
2795 3162 3.236896 GCCCATCCTGGATTGATTCAAT 58.763 45.455 11.64 11.64 40.96 2.57
2796 3163 2.669781 GCCCATCCTGGATTGATTCAA 58.330 47.619 6.42 0.75 40.96 2.69
2797 3164 1.133388 GGCCCATCCTGGATTGATTCA 60.133 52.381 6.42 0.00 40.96 2.57
2798 3165 1.625511 GGCCCATCCTGGATTGATTC 58.374 55.000 6.42 0.00 40.96 2.52
2799 3166 0.178981 CGGCCCATCCTGGATTGATT 60.179 55.000 6.42 0.00 40.96 2.57
2800 3167 1.061905 TCGGCCCATCCTGGATTGAT 61.062 55.000 6.42 0.00 40.96 2.57
2801 3168 1.278302 TTCGGCCCATCCTGGATTGA 61.278 55.000 6.42 0.00 40.96 2.57
2802 3169 0.178981 ATTCGGCCCATCCTGGATTG 60.179 55.000 6.42 3.32 40.96 2.67
2803 3170 0.178981 CATTCGGCCCATCCTGGATT 60.179 55.000 6.42 0.00 40.96 3.01
2804 3171 1.457604 CATTCGGCCCATCCTGGAT 59.542 57.895 2.57 2.57 40.96 3.41
2805 3172 2.918248 CATTCGGCCCATCCTGGA 59.082 61.111 0.00 0.00 40.96 3.86
2806 3173 2.055689 TAGCATTCGGCCCATCCTGG 62.056 60.000 0.00 0.00 46.50 4.45
2807 3174 0.604780 CTAGCATTCGGCCCATCCTG 60.605 60.000 0.00 0.00 46.50 3.86
2808 3175 0.764369 TCTAGCATTCGGCCCATCCT 60.764 55.000 0.00 0.00 46.50 3.24
2809 3176 0.321122 CTCTAGCATTCGGCCCATCC 60.321 60.000 0.00 0.00 46.50 3.51
2810 3177 0.681733 TCTCTAGCATTCGGCCCATC 59.318 55.000 0.00 0.00 46.50 3.51
2811 3178 1.356124 ATCTCTAGCATTCGGCCCAT 58.644 50.000 0.00 0.00 46.50 4.00
2812 3179 1.131638 AATCTCTAGCATTCGGCCCA 58.868 50.000 0.00 0.00 46.50 5.36
2813 3180 3.618690 ATAATCTCTAGCATTCGGCCC 57.381 47.619 0.00 0.00 46.50 5.80
2814 3181 7.493367 ACTAATATAATCTCTAGCATTCGGCC 58.507 38.462 0.00 0.00 46.50 6.13
2815 3182 8.934507 AACTAATATAATCTCTAGCATTCGGC 57.065 34.615 0.00 0.00 45.30 5.54
2821 3188 8.388853 CGTCGCTAACTAATATAATCTCTAGCA 58.611 37.037 0.00 0.00 31.99 3.49
2822 3189 7.851963 CCGTCGCTAACTAATATAATCTCTAGC 59.148 40.741 0.00 0.00 0.00 3.42
2823 3190 7.851963 GCCGTCGCTAACTAATATAATCTCTAG 59.148 40.741 0.00 0.00 0.00 2.43
2824 3191 7.335171 TGCCGTCGCTAACTAATATAATCTCTA 59.665 37.037 0.00 0.00 35.36 2.43
2825 3192 6.150641 TGCCGTCGCTAACTAATATAATCTCT 59.849 38.462 0.00 0.00 35.36 3.10
2826 3193 6.250951 GTGCCGTCGCTAACTAATATAATCTC 59.749 42.308 0.00 0.00 35.36 2.75
2827 3194 6.091437 GTGCCGTCGCTAACTAATATAATCT 58.909 40.000 0.00 0.00 35.36 2.40
2828 3195 5.860182 TGTGCCGTCGCTAACTAATATAATC 59.140 40.000 0.00 0.00 35.36 1.75
2829 3196 5.775686 TGTGCCGTCGCTAACTAATATAAT 58.224 37.500 0.00 0.00 35.36 1.28
2830 3197 5.185668 TGTGCCGTCGCTAACTAATATAA 57.814 39.130 0.00 0.00 35.36 0.98
2831 3198 4.834357 TGTGCCGTCGCTAACTAATATA 57.166 40.909 0.00 0.00 35.36 0.86
2832 3199 3.720949 TGTGCCGTCGCTAACTAATAT 57.279 42.857 0.00 0.00 35.36 1.28
2833 3200 3.720949 ATGTGCCGTCGCTAACTAATA 57.279 42.857 0.00 0.00 35.36 0.98
2834 3201 2.596904 ATGTGCCGTCGCTAACTAAT 57.403 45.000 0.00 0.00 35.36 1.73
2835 3202 3.720949 ATATGTGCCGTCGCTAACTAA 57.279 42.857 0.00 0.00 35.36 2.24
2836 3203 3.565063 TGTATATGTGCCGTCGCTAACTA 59.435 43.478 0.00 0.00 35.36 2.24
2837 3204 2.359848 TGTATATGTGCCGTCGCTAACT 59.640 45.455 0.00 0.00 35.36 2.24
2838 3205 2.734670 TGTATATGTGCCGTCGCTAAC 58.265 47.619 0.00 0.00 35.36 2.34
2839 3206 3.653539 ATGTATATGTGCCGTCGCTAA 57.346 42.857 0.00 0.00 35.36 3.09
2840 3207 4.976224 ATATGTATATGTGCCGTCGCTA 57.024 40.909 0.00 0.00 35.36 4.26
2841 3208 3.868757 ATATGTATATGTGCCGTCGCT 57.131 42.857 0.00 0.00 35.36 4.93
2842 3209 3.481028 CGTATATGTATATGTGCCGTCGC 59.519 47.826 0.00 0.00 0.00 5.19
2843 3210 3.481028 GCGTATATGTATATGTGCCGTCG 59.519 47.826 0.00 0.00 0.00 5.12
2844 3211 3.481028 CGCGTATATGTATATGTGCCGTC 59.519 47.826 0.00 0.00 31.39 4.79
2845 3212 3.119743 ACGCGTATATGTATATGTGCCGT 60.120 43.478 11.67 5.60 38.57 5.68
2846 3213 3.431856 ACGCGTATATGTATATGTGCCG 58.568 45.455 11.67 5.13 38.57 5.69
2847 3214 6.874297 TTAACGCGTATATGTATATGTGCC 57.126 37.500 14.46 0.00 38.57 5.01
2848 3215 9.749490 ATTTTTAACGCGTATATGTATATGTGC 57.251 29.630 14.46 4.86 38.57 4.57
2854 3221 9.858247 CACTTGATTTTTAACGCGTATATGTAT 57.142 29.630 14.46 1.90 0.00 2.29
2855 3222 9.085250 TCACTTGATTTTTAACGCGTATATGTA 57.915 29.630 14.46 0.00 0.00 2.29
2856 3223 7.966111 TCACTTGATTTTTAACGCGTATATGT 58.034 30.769 14.46 0.00 0.00 2.29
2857 3224 8.114290 ACTCACTTGATTTTTAACGCGTATATG 58.886 33.333 14.46 0.00 0.00 1.78
2858 3225 8.193250 ACTCACTTGATTTTTAACGCGTATAT 57.807 30.769 14.46 0.00 0.00 0.86
2859 3226 7.585286 ACTCACTTGATTTTTAACGCGTATA 57.415 32.000 14.46 4.46 0.00 1.47
2860 3227 6.476243 ACTCACTTGATTTTTAACGCGTAT 57.524 33.333 14.46 0.19 0.00 3.06
2861 3228 5.910637 ACTCACTTGATTTTTAACGCGTA 57.089 34.783 14.46 0.00 0.00 4.42
2862 3229 4.806342 ACTCACTTGATTTTTAACGCGT 57.194 36.364 5.58 5.58 0.00 6.01
2863 3230 6.490877 AAAACTCACTTGATTTTTAACGCG 57.509 33.333 3.53 3.53 35.87 6.01
2873 3240 9.793252 GTGATTGCATATAAAAACTCACTTGAT 57.207 29.630 0.00 0.00 31.42 2.57
2874 3241 8.243426 GGTGATTGCATATAAAAACTCACTTGA 58.757 33.333 0.00 0.00 33.88 3.02
2875 3242 8.246180 AGGTGATTGCATATAAAAACTCACTTG 58.754 33.333 0.00 0.00 33.88 3.16
2876 3243 8.353423 AGGTGATTGCATATAAAAACTCACTT 57.647 30.769 0.00 0.00 33.88 3.16
2877 3244 7.944729 AGGTGATTGCATATAAAAACTCACT 57.055 32.000 0.00 0.00 33.88 3.41
2878 3245 8.986477 AAAGGTGATTGCATATAAAAACTCAC 57.014 30.769 0.00 0.00 0.00 3.51
2885 3252 9.914834 AGGTAAGTAAAGGTGATTGCATATAAA 57.085 29.630 0.00 0.00 0.00 1.40
2886 3253 9.337396 CAGGTAAGTAAAGGTGATTGCATATAA 57.663 33.333 0.00 0.00 0.00 0.98
2887 3254 7.444183 GCAGGTAAGTAAAGGTGATTGCATATA 59.556 37.037 0.00 0.00 0.00 0.86
2888 3255 6.263168 GCAGGTAAGTAAAGGTGATTGCATAT 59.737 38.462 0.00 0.00 0.00 1.78
2889 3256 5.588648 GCAGGTAAGTAAAGGTGATTGCATA 59.411 40.000 0.00 0.00 0.00 3.14
2890 3257 4.399303 GCAGGTAAGTAAAGGTGATTGCAT 59.601 41.667 0.00 0.00 0.00 3.96
2891 3258 3.756434 GCAGGTAAGTAAAGGTGATTGCA 59.244 43.478 0.00 0.00 0.00 4.08
2892 3259 3.128764 GGCAGGTAAGTAAAGGTGATTGC 59.871 47.826 0.00 0.00 0.00 3.56
2893 3260 4.589908 AGGCAGGTAAGTAAAGGTGATTG 58.410 43.478 0.00 0.00 0.00 2.67
2894 3261 4.536489 AGAGGCAGGTAAGTAAAGGTGATT 59.464 41.667 0.00 0.00 0.00 2.57
2895 3262 4.104831 AGAGGCAGGTAAGTAAAGGTGAT 58.895 43.478 0.00 0.00 0.00 3.06
2896 3263 3.514309 GAGAGGCAGGTAAGTAAAGGTGA 59.486 47.826 0.00 0.00 0.00 4.02
2897 3264 3.369576 GGAGAGGCAGGTAAGTAAAGGTG 60.370 52.174 0.00 0.00 0.00 4.00
2898 3265 2.838813 GGAGAGGCAGGTAAGTAAAGGT 59.161 50.000 0.00 0.00 0.00 3.50
2899 3266 2.838202 TGGAGAGGCAGGTAAGTAAAGG 59.162 50.000 0.00 0.00 0.00 3.11
2900 3267 4.762289 ATGGAGAGGCAGGTAAGTAAAG 57.238 45.455 0.00 0.00 0.00 1.85
2901 3268 6.824958 ATAATGGAGAGGCAGGTAAGTAAA 57.175 37.500 0.00 0.00 0.00 2.01
2902 3269 6.824958 AATAATGGAGAGGCAGGTAAGTAA 57.175 37.500 0.00 0.00 0.00 2.24
2903 3270 7.924358 TTAATAATGGAGAGGCAGGTAAGTA 57.076 36.000 0.00 0.00 0.00 2.24
2904 3271 6.824958 TTAATAATGGAGAGGCAGGTAAGT 57.175 37.500 0.00 0.00 0.00 2.24
2905 3272 7.173907 CACATTAATAATGGAGAGGCAGGTAAG 59.826 40.741 16.36 0.00 43.21 2.34
2906 3273 6.998074 CACATTAATAATGGAGAGGCAGGTAA 59.002 38.462 16.36 0.00 43.21 2.85
2907 3274 6.328934 TCACATTAATAATGGAGAGGCAGGTA 59.671 38.462 16.36 0.00 43.21 3.08
2908 3275 5.132648 TCACATTAATAATGGAGAGGCAGGT 59.867 40.000 16.36 0.00 43.21 4.00
2909 3276 5.624159 TCACATTAATAATGGAGAGGCAGG 58.376 41.667 16.36 0.00 43.21 4.85
2910 3277 6.091849 CGATCACATTAATAATGGAGAGGCAG 59.908 42.308 16.36 4.82 43.21 4.85
2911 3278 5.934043 CGATCACATTAATAATGGAGAGGCA 59.066 40.000 16.36 0.00 43.21 4.75
2912 3279 5.934625 ACGATCACATTAATAATGGAGAGGC 59.065 40.000 16.36 9.36 43.21 4.70
2913 3280 6.931281 ACACGATCACATTAATAATGGAGAGG 59.069 38.462 16.36 11.61 43.21 3.69
2914 3281 7.953158 ACACGATCACATTAATAATGGAGAG 57.047 36.000 16.36 10.67 43.21 3.20
2915 3282 8.638873 AGTACACGATCACATTAATAATGGAGA 58.361 33.333 16.36 13.45 43.21 3.71
2916 3283 8.818141 AGTACACGATCACATTAATAATGGAG 57.182 34.615 16.36 9.08 43.21 3.86
2926 3293 9.817809 ATCTACATTTTAGTACACGATCACATT 57.182 29.630 0.00 0.00 0.00 2.71
2927 3294 9.817809 AATCTACATTTTAGTACACGATCACAT 57.182 29.630 0.00 0.00 0.00 3.21
2928 3295 9.647797 AAATCTACATTTTAGTACACGATCACA 57.352 29.630 0.00 0.00 0.00 3.58
2933 3300 9.624697 ACGTAAAATCTACATTTTAGTACACGA 57.375 29.630 12.41 0.00 42.57 4.35
2934 3301 9.666163 CACGTAAAATCTACATTTTAGTACACG 57.334 33.333 0.00 6.80 42.57 4.49
2952 3319 9.316730 AGCCGATAAAGTTATTATCACGTAAAA 57.683 29.630 8.45 0.00 32.40 1.52
2953 3320 8.876275 AGCCGATAAAGTTATTATCACGTAAA 57.124 30.769 8.45 0.00 32.40 2.01
2954 3321 8.876275 AAGCCGATAAAGTTATTATCACGTAA 57.124 30.769 8.45 0.00 32.40 3.18
2956 3323 9.136952 GATAAGCCGATAAAGTTATTATCACGT 57.863 33.333 8.45 0.00 32.40 4.49
2957 3324 9.135843 TGATAAGCCGATAAAGTTATTATCACG 57.864 33.333 8.45 0.00 32.40 4.35
2965 3332 8.395633 GCTTTCTTTGATAAGCCGATAAAGTTA 58.604 33.333 0.00 0.00 40.61 2.24
2966 3333 7.094377 TGCTTTCTTTGATAAGCCGATAAAGTT 60.094 33.333 0.00 0.00 44.72 2.66
2967 3334 6.374333 TGCTTTCTTTGATAAGCCGATAAAGT 59.626 34.615 0.00 0.00 44.72 2.66
2968 3335 6.785191 TGCTTTCTTTGATAAGCCGATAAAG 58.215 36.000 0.00 0.00 44.72 1.85
2969 3336 6.597672 TCTGCTTTCTTTGATAAGCCGATAAA 59.402 34.615 0.00 0.00 44.72 1.40
2970 3337 6.112734 TCTGCTTTCTTTGATAAGCCGATAA 58.887 36.000 0.00 0.00 44.72 1.75
2971 3338 5.670485 TCTGCTTTCTTTGATAAGCCGATA 58.330 37.500 0.00 0.00 44.72 2.92
2972 3339 4.517285 TCTGCTTTCTTTGATAAGCCGAT 58.483 39.130 0.00 0.00 44.72 4.18
2973 3340 3.937814 TCTGCTTTCTTTGATAAGCCGA 58.062 40.909 0.00 0.00 44.72 5.54
2974 3341 4.154918 ACTTCTGCTTTCTTTGATAAGCCG 59.845 41.667 0.00 0.00 44.72 5.52
2975 3342 5.635417 ACTTCTGCTTTCTTTGATAAGCC 57.365 39.130 0.00 0.00 44.72 4.35
2976 3343 9.631452 AATAAACTTCTGCTTTCTTTGATAAGC 57.369 29.630 0.00 0.00 45.36 3.09
2979 3346 9.912634 CCAAATAAACTTCTGCTTTCTTTGATA 57.087 29.630 7.41 0.00 31.31 2.15
2980 3347 8.424133 ACCAAATAAACTTCTGCTTTCTTTGAT 58.576 29.630 7.41 0.00 31.31 2.57
2981 3348 7.781056 ACCAAATAAACTTCTGCTTTCTTTGA 58.219 30.769 7.41 0.00 31.31 2.69
2982 3349 8.424274 AACCAAATAAACTTCTGCTTTCTTTG 57.576 30.769 0.00 0.00 30.32 2.77
2983 3350 9.750125 CTAACCAAATAAACTTCTGCTTTCTTT 57.250 29.630 0.00 0.00 0.00 2.52
2984 3351 8.914011 ACTAACCAAATAAACTTCTGCTTTCTT 58.086 29.630 0.00 0.00 0.00 2.52
2985 3352 8.465273 ACTAACCAAATAAACTTCTGCTTTCT 57.535 30.769 0.00 0.00 0.00 2.52
3016 3383 7.286546 TCCTCTCTCGATCTCAATTCTAAACAT 59.713 37.037 0.00 0.00 0.00 2.71
3043 3410 3.248602 ACATCTTTGTGTTTGTCTCTCGC 59.751 43.478 0.00 0.00 33.85 5.03
3123 3493 1.682684 ATCTCTTCGGTCGCACCCT 60.683 57.895 0.50 0.00 33.75 4.34
3259 3632 5.254267 TCCTCATATTTTTCCCACAGGGTTA 59.746 40.000 1.36 0.00 44.74 2.85
3303 3678 5.304357 CCACTGGGTTTGAAGGAGTTTTAAT 59.696 40.000 0.00 0.00 0.00 1.40
3304 3679 4.647399 CCACTGGGTTTGAAGGAGTTTTAA 59.353 41.667 0.00 0.00 0.00 1.52
3337 3712 9.139734 ACCATTATATGTTGCATCATTTTCTCT 57.860 29.630 15.16 0.00 0.00 3.10
3504 3883 7.916914 TTACTTTACAGGTTCTCATAAAGGC 57.083 36.000 7.33 0.00 38.43 4.35
3550 3929 9.518906 TTGTTCATGTTCAATGCATCATATTAC 57.481 29.630 0.00 0.00 0.00 1.89
3570 3949 4.325030 GGGGGTATCTTCCTGAATTGTTCA 60.325 45.833 0.00 0.00 38.17 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.