Multiple sequence alignment - TraesCS2D01G490600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G490600 chr2D 100.000 2954 0 0 1 2954 589495454 589498407 0.000000e+00 5456.0
1 TraesCS2D01G490600 chr2A 91.360 2500 130 21 22 2463 723822681 723825152 0.000000e+00 3341.0
2 TraesCS2D01G490600 chr2B 94.382 2136 65 13 9 2123 713674152 713676253 0.000000e+00 3229.0
3 TraesCS2D01G490600 chr2B 90.840 131 10 1 2092 2220 713676260 713676390 1.090000e-39 174.0
4 TraesCS2D01G490600 chr2B 84.127 63 8 2 2552 2613 740797929 740797868 3.180000e-05 60.2
5 TraesCS2D01G490600 chr4B 86.062 452 40 14 468 916 149737841 149738272 5.770000e-127 464.0
6 TraesCS2D01G490600 chr4B 89.956 229 19 3 422 650 149736502 149736726 2.880000e-75 292.0
7 TraesCS2D01G490600 chr4B 88.000 50 3 1 2549 2595 75939453 75939502 4.110000e-04 56.5
8 TraesCS2D01G490600 chr7B 86.093 453 36 15 468 916 683287389 683287818 2.070000e-126 462.0
9 TraesCS2D01G490600 chr7B 88.757 169 12 3 486 650 683246457 683246622 1.800000e-47 200.0
10 TraesCS2D01G490600 chr7B 76.961 204 25 8 2650 2832 724271144 724270942 2.420000e-16 97.1
11 TraesCS2D01G490600 chr7B 90.566 53 3 2 2553 2604 639383314 639383365 5.280000e-08 69.4
12 TraesCS2D01G490600 chr7B 86.792 53 6 1 2552 2604 725811077 725811128 1.140000e-04 58.4
13 TraesCS2D01G490600 chr3A 85.683 454 36 16 468 916 697483761 697483332 4.490000e-123 451.0
14 TraesCS2D01G490600 chr3A 92.140 229 15 2 422 650 697485557 697485332 1.320000e-83 320.0
15 TraesCS2D01G490600 chr3A 89.520 229 21 2 422 650 17567512 17567737 1.340000e-73 287.0
16 TraesCS2D01G490600 chr3A 87.755 49 5 1 2550 2597 25056504 25056552 4.110000e-04 56.5
17 TraesCS2D01G490600 chr6A 84.071 452 41 11 468 916 103973051 103972628 9.860000e-110 407.0
18 TraesCS2D01G490600 chr6A 91.703 229 16 2 422 650 103974836 103974611 6.150000e-82 315.0
19 TraesCS2D01G490600 chrUn 85.030 167 16 5 2555 2720 8468810 8468968 8.470000e-36 161.0
20 TraesCS2D01G490600 chr5D 85.714 98 13 1 2857 2954 245177905 245178001 5.210000e-18 102.0
21 TraesCS2D01G490600 chr5D 83.582 67 9 2 2553 2618 358595672 358595737 8.840000e-06 62.1
22 TraesCS2D01G490600 chr4A 86.667 90 4 4 2465 2554 684980800 684980719 3.130000e-15 93.5
23 TraesCS2D01G490600 chr5B 81.818 99 18 0 2856 2954 635779279 635779377 1.890000e-12 84.2
24 TraesCS2D01G490600 chr7A 91.304 46 1 2 2553 2595 165945063 165945108 3.180000e-05 60.2
25 TraesCS2D01G490600 chr1B 89.362 47 2 1 2552 2595 329452647 329452601 4.110000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G490600 chr2D 589495454 589498407 2953 False 5456.0 5456 100.0000 1 2954 1 chr2D.!!$F1 2953
1 TraesCS2D01G490600 chr2A 723822681 723825152 2471 False 3341.0 3341 91.3600 22 2463 1 chr2A.!!$F1 2441
2 TraesCS2D01G490600 chr2B 713674152 713676390 2238 False 1701.5 3229 92.6110 9 2220 2 chr2B.!!$F1 2211
3 TraesCS2D01G490600 chr4B 149736502 149738272 1770 False 378.0 464 88.0090 422 916 2 chr4B.!!$F2 494
4 TraesCS2D01G490600 chr3A 697483332 697485557 2225 True 385.5 451 88.9115 422 916 2 chr3A.!!$R1 494
5 TraesCS2D01G490600 chr6A 103972628 103974836 2208 True 361.0 407 87.8870 422 916 2 chr6A.!!$R1 494

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
235 236 0.034059 CCCGCCACACCATCTAGATC 59.966 60.0 1.03 0.0 0.0 2.75 F
236 237 1.043816 CCGCCACACCATCTAGATCT 58.956 55.0 1.03 0.0 0.0 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1215 3026 0.254178 AGCCACAGGATGCGAGAATT 59.746 50.000 0.0 0.0 42.53 2.17 R
2207 4070 1.348250 CACACACACACACGAGCAC 59.652 57.895 0.0 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 4.215370 CGGGAGATCCTGGCCATA 57.785 61.111 5.51 0.00 38.76 2.74
102 103 2.840640 TCCTTCCTCCGAGGTATGAA 57.159 50.000 14.36 0.44 36.53 2.57
117 118 5.003804 AGGTATGAACAGCTAGGTTGTTTG 58.996 41.667 9.91 0.00 37.12 2.93
136 137 1.651240 GCATCACCGCAGCATCAACT 61.651 55.000 0.00 0.00 0.00 3.16
152 153 6.042143 GCATCAACTCTCTTTGTTTCCAAAA 58.958 36.000 0.00 0.00 39.95 2.44
153 154 6.534793 GCATCAACTCTCTTTGTTTCCAAAAA 59.465 34.615 0.00 0.00 39.95 1.94
174 175 1.967319 TCAATCAATTCCGCTAGGGC 58.033 50.000 0.19 0.00 38.33 5.19
178 179 0.980754 TCAATTCCGCTAGGGCAGGA 60.981 55.000 0.19 0.00 38.58 3.86
235 236 0.034059 CCCGCCACACCATCTAGATC 59.966 60.000 1.03 0.00 0.00 2.75
236 237 1.043816 CCGCCACACCATCTAGATCT 58.956 55.000 1.03 0.00 0.00 2.75
237 238 1.269988 CCGCCACACCATCTAGATCTG 60.270 57.143 5.18 3.91 0.00 2.90
238 239 1.871408 CGCCACACCATCTAGATCTGC 60.871 57.143 5.18 0.00 0.00 4.26
239 240 1.542108 GCCACACCATCTAGATCTGCC 60.542 57.143 5.18 0.00 0.00 4.85
240 241 2.045524 CCACACCATCTAGATCTGCCT 58.954 52.381 5.18 0.00 0.00 4.75
248 249 1.460305 TAGATCTGCCTCTGCCCCC 60.460 63.158 5.18 0.00 36.33 5.40
365 372 3.131396 CGGATTCTGCCTACGCTTTTAT 58.869 45.455 0.00 0.00 35.36 1.40
366 373 3.560068 CGGATTCTGCCTACGCTTTTATT 59.440 43.478 0.00 0.00 35.36 1.40
452 482 2.169832 TTGTACTGGAGTTGCTGCTC 57.830 50.000 0.00 0.40 34.89 4.26
483 2286 5.189736 TCATATTGGTTCAGTACTGCCTCTT 59.810 40.000 18.45 6.39 0.00 2.85
539 2344 5.809001 TCTTTGCCATGACTAGATTCAAGT 58.191 37.500 0.00 0.00 0.00 3.16
650 2457 8.376270 AGTAGGTTATTAGCAAATCCTATGTCC 58.624 37.037 0.00 0.00 29.16 4.02
659 2466 4.708177 CAAATCCTATGTCCAGGGTACAG 58.292 47.826 0.00 0.00 36.26 2.74
675 2482 3.127030 GGTACAGATTTTGCCACACTAGC 59.873 47.826 0.00 0.00 0.00 3.42
712 2521 8.474006 TTTTTCCTTTCTTTTTCTTTCTTCCG 57.526 30.769 0.00 0.00 0.00 4.30
800 2609 5.385198 TGCTTTTCTCCCTGTTGTTTATCT 58.615 37.500 0.00 0.00 0.00 1.98
897 2707 4.910195 ACTTGGATTGTCTGATGCAGTTA 58.090 39.130 0.00 0.00 32.61 2.24
951 2762 5.771666 TCTGTTTTCCTGAATTGAGCTCATT 59.228 36.000 19.04 11.66 0.00 2.57
993 2804 3.884037 AGGATCAAAGTTCAGGTTGGT 57.116 42.857 0.00 0.00 0.00 3.67
1215 3026 1.064017 GCCCATCCCAAGTATGGTTCA 60.064 52.381 0.00 0.00 46.01 3.18
1230 3041 2.290260 TGGTTCAATTCTCGCATCCTGT 60.290 45.455 0.00 0.00 0.00 4.00
1317 3128 0.467290 TTGACAACCACAAGGCCTCC 60.467 55.000 5.23 0.00 39.06 4.30
1428 3239 3.494048 GGCTTGATACAGGAGGATGTGAG 60.494 52.174 0.00 0.00 34.56 3.51
1431 3242 1.346068 GATACAGGAGGATGTGAGGCC 59.654 57.143 0.00 0.00 34.56 5.19
1440 3251 1.718757 GATGTGAGGCCGCAACCATC 61.719 60.000 19.46 19.46 36.26 3.51
1964 3778 0.324368 ATGCAGTAGGGGAGTCGACA 60.324 55.000 19.50 0.00 0.00 4.35
1972 3786 1.153823 GGGAGTCGACACCACATCG 60.154 63.158 29.44 0.00 41.00 3.84
2035 3857 0.961019 GCCATGACTTGCTTTCACCA 59.039 50.000 0.00 0.00 0.00 4.17
2159 4020 2.876091 CACACCGTCAGAATGTATCGT 58.124 47.619 0.00 0.00 37.40 3.73
2172 4033 4.928661 ATGTATCGTCTGTTTGAACTGC 57.071 40.909 0.00 0.00 0.00 4.40
2185 4046 5.709631 TGTTTGAACTGCTTATATCCTGCAA 59.290 36.000 0.00 0.00 36.22 4.08
2207 4070 6.649436 CAATAGCTGTTATCGGTGTTATGTG 58.351 40.000 0.00 0.00 0.00 3.21
2213 4076 1.640428 ATCGGTGTTATGTGTGCTCG 58.360 50.000 0.00 0.00 0.00 5.03
2214 4077 0.315886 TCGGTGTTATGTGTGCTCGT 59.684 50.000 0.00 0.00 0.00 4.18
2215 4078 0.438445 CGGTGTTATGTGTGCTCGTG 59.562 55.000 0.00 0.00 0.00 4.35
2216 4079 1.508632 GGTGTTATGTGTGCTCGTGT 58.491 50.000 0.00 0.00 0.00 4.49
2217 4080 1.194547 GGTGTTATGTGTGCTCGTGTG 59.805 52.381 0.00 0.00 0.00 3.82
2218 4081 1.864711 GTGTTATGTGTGCTCGTGTGT 59.135 47.619 0.00 0.00 0.00 3.72
2231 4094 2.272678 TCGTGTGTGTGTGTGTAAAGG 58.727 47.619 0.00 0.00 0.00 3.11
2236 4099 2.353579 GTGTGTGTGTGTAAAGGTCCAC 59.646 50.000 0.00 0.00 0.00 4.02
2311 4186 4.540153 CGTAGGTTGATGGCTGGG 57.460 61.111 0.00 0.00 0.00 4.45
2315 4190 4.740822 GGTTGATGGCTGGGCGGT 62.741 66.667 0.00 0.00 0.00 5.68
2340 4215 2.664851 TGCTCGTGGCCGTGAAAG 60.665 61.111 0.00 0.00 40.92 2.62
2348 4223 1.072505 GGCCGTGAAAGAACCTGGA 59.927 57.895 0.00 0.00 0.00 3.86
2358 4233 2.852075 AACCTGGACGCTGGGGAA 60.852 61.111 0.00 0.00 0.00 3.97
2369 4244 1.260544 GCTGGGGAACAATTCTTGCT 58.739 50.000 0.00 0.00 0.00 3.91
2371 4246 1.547372 CTGGGGAACAATTCTTGCTGG 59.453 52.381 0.00 0.00 0.00 4.85
2374 4249 0.733909 GGAACAATTCTTGCTGGCGC 60.734 55.000 0.00 0.00 0.00 6.53
2400 4275 1.578206 GCTCGTGGCCCTGAAAGAAC 61.578 60.000 0.00 0.00 31.99 3.01
2402 4277 1.073199 CGTGGCCCTGAAAGAACCT 59.927 57.895 0.00 0.00 34.07 3.50
2403 4278 1.237285 CGTGGCCCTGAAAGAACCTG 61.237 60.000 0.00 0.00 34.07 4.00
2404 4279 0.110486 GTGGCCCTGAAAGAACCTGA 59.890 55.000 0.00 0.00 34.07 3.86
2405 4280 1.075601 TGGCCCTGAAAGAACCTGAT 58.924 50.000 0.00 0.00 34.07 2.90
2406 4281 1.428912 TGGCCCTGAAAGAACCTGATT 59.571 47.619 0.00 0.00 34.07 2.57
2407 4282 1.821136 GGCCCTGAAAGAACCTGATTG 59.179 52.381 0.00 0.00 34.07 2.67
2408 4283 2.519013 GCCCTGAAAGAACCTGATTGT 58.481 47.619 0.00 0.00 34.07 2.71
2423 4298 4.142816 CCTGATTGTTGATTGTTCCTCGTC 60.143 45.833 0.00 0.00 0.00 4.20
2424 4299 4.384940 TGATTGTTGATTGTTCCTCGTCA 58.615 39.130 0.00 0.00 0.00 4.35
2435 4310 2.494073 GTTCCTCGTCATCTCTCCAGTT 59.506 50.000 0.00 0.00 0.00 3.16
2437 4312 2.095461 CCTCGTCATCTCTCCAGTTCA 58.905 52.381 0.00 0.00 0.00 3.18
2451 4336 2.752354 CCAGTTCATTATTTGCGTCCCA 59.248 45.455 0.00 0.00 0.00 4.37
2472 4357 4.154347 GCCGGAGACCTGAGGCTG 62.154 72.222 5.05 0.00 45.67 4.85
2473 4358 4.154347 CCGGAGACCTGAGGCTGC 62.154 72.222 0.00 1.04 0.00 5.25
2474 4359 3.073735 CGGAGACCTGAGGCTGCT 61.074 66.667 0.00 0.00 0.00 4.24
2475 4360 2.583520 GGAGACCTGAGGCTGCTG 59.416 66.667 0.00 0.00 0.00 4.41
2476 4361 2.125188 GAGACCTGAGGCTGCTGC 60.125 66.667 7.10 7.10 38.76 5.25
2500 4385 4.803426 CTGGCCGGCGTCTCTCAC 62.803 72.222 22.54 3.93 0.00 3.51
2502 4387 4.500116 GGCCGGCGTCTCTCACTC 62.500 72.222 22.54 0.00 0.00 3.51
2503 4388 3.749064 GCCGGCGTCTCTCACTCA 61.749 66.667 12.58 0.00 0.00 3.41
2504 4389 2.179517 CCGGCGTCTCTCACTCAC 59.820 66.667 6.01 0.00 0.00 3.51
2505 4390 2.179517 CGGCGTCTCTCACTCACC 59.820 66.667 0.00 0.00 0.00 4.02
2506 4391 2.179517 GGCGTCTCTCACTCACCG 59.820 66.667 0.00 0.00 0.00 4.94
2507 4392 2.179517 GCGTCTCTCACTCACCGG 59.820 66.667 0.00 0.00 0.00 5.28
2508 4393 2.627737 GCGTCTCTCACTCACCGGT 61.628 63.158 0.00 0.00 0.00 5.28
2509 4394 1.303799 GCGTCTCTCACTCACCGGTA 61.304 60.000 6.87 0.00 0.00 4.02
2510 4395 1.380524 CGTCTCTCACTCACCGGTAT 58.619 55.000 6.87 0.00 0.00 2.73
2511 4396 1.064208 CGTCTCTCACTCACCGGTATG 59.936 57.143 6.87 6.55 0.00 2.39
2512 4397 1.103803 TCTCTCACTCACCGGTATGC 58.896 55.000 6.87 0.00 0.00 3.14
2513 4398 0.103208 CTCTCACTCACCGGTATGCC 59.897 60.000 6.87 0.00 0.00 4.40
2528 4413 3.737172 GCCGTGTGCATCGCCTTT 61.737 61.111 8.40 0.00 40.77 3.11
2529 4414 2.176546 CCGTGTGCATCGCCTTTG 59.823 61.111 8.40 0.00 0.00 2.77
2530 4415 2.324330 CCGTGTGCATCGCCTTTGA 61.324 57.895 8.40 0.00 0.00 2.69
2531 4416 1.154413 CGTGTGCATCGCCTTTGAC 60.154 57.895 0.00 0.00 0.00 3.18
2532 4417 1.840630 CGTGTGCATCGCCTTTGACA 61.841 55.000 0.00 0.00 0.00 3.58
2533 4418 0.385974 GTGTGCATCGCCTTTGACAC 60.386 55.000 0.00 0.00 0.00 3.67
2534 4419 1.210155 GTGCATCGCCTTTGACACC 59.790 57.895 0.00 0.00 0.00 4.16
2535 4420 1.228094 TGCATCGCCTTTGACACCA 60.228 52.632 0.00 0.00 0.00 4.17
2536 4421 0.608856 TGCATCGCCTTTGACACCAT 60.609 50.000 0.00 0.00 0.00 3.55
2537 4422 0.179156 GCATCGCCTTTGACACCATG 60.179 55.000 0.00 0.00 0.00 3.66
2538 4423 0.452987 CATCGCCTTTGACACCATGG 59.547 55.000 11.19 11.19 0.00 3.66
2539 4424 0.327924 ATCGCCTTTGACACCATGGA 59.672 50.000 21.47 0.00 0.00 3.41
2540 4425 0.605319 TCGCCTTTGACACCATGGAC 60.605 55.000 21.47 9.95 0.00 4.02
2541 4426 0.888736 CGCCTTTGACACCATGGACA 60.889 55.000 21.47 12.56 0.00 4.02
2542 4427 1.549203 GCCTTTGACACCATGGACAT 58.451 50.000 21.47 2.28 0.00 3.06
2543 4428 1.474077 GCCTTTGACACCATGGACATC 59.526 52.381 21.47 12.87 0.00 3.06
2544 4429 2.094675 CCTTTGACACCATGGACATCC 58.905 52.381 21.47 3.15 0.00 3.51
2545 4430 1.739466 CTTTGACACCATGGACATCCG 59.261 52.381 21.47 1.66 39.43 4.18
2546 4431 0.035534 TTGACACCATGGACATCCGG 60.036 55.000 21.47 0.00 39.43 5.14
2547 4432 1.153168 GACACCATGGACATCCGGG 60.153 63.158 21.47 6.84 39.43 5.73
2548 4433 2.516930 CACCATGGACATCCGGGC 60.517 66.667 21.47 0.00 39.43 6.13
2549 4434 2.692368 ACCATGGACATCCGGGCT 60.692 61.111 21.47 0.00 39.43 5.19
2550 4435 1.383943 ACCATGGACATCCGGGCTA 60.384 57.895 21.47 0.00 39.43 3.93
2551 4436 1.071471 CCATGGACATCCGGGCTAC 59.929 63.158 5.56 0.00 39.43 3.58
2552 4437 1.410850 CCATGGACATCCGGGCTACT 61.411 60.000 5.56 0.00 39.43 2.57
2553 4438 0.469917 CATGGACATCCGGGCTACTT 59.530 55.000 0.00 0.00 39.43 2.24
2554 4439 1.691976 CATGGACATCCGGGCTACTTA 59.308 52.381 0.00 0.00 39.43 2.24
2555 4440 1.410004 TGGACATCCGGGCTACTTAG 58.590 55.000 0.00 0.00 39.43 2.18
2556 4441 1.063492 TGGACATCCGGGCTACTTAGA 60.063 52.381 0.00 0.00 39.43 2.10
2557 4442 1.614413 GGACATCCGGGCTACTTAGAG 59.386 57.143 0.00 0.00 0.00 2.43
2558 4443 1.000052 GACATCCGGGCTACTTAGAGC 60.000 57.143 0.00 0.00 42.05 4.09
2559 4444 1.040646 CATCCGGGCTACTTAGAGCA 58.959 55.000 0.00 0.00 44.76 4.26
2560 4445 1.620819 CATCCGGGCTACTTAGAGCAT 59.379 52.381 0.00 0.00 44.76 3.79
2561 4446 1.329256 TCCGGGCTACTTAGAGCATC 58.671 55.000 0.00 0.00 44.76 3.91
2575 4460 1.202114 GAGCATCTCTAGCAGATCCCG 59.798 57.143 0.00 0.00 40.20 5.14
2576 4461 0.965439 GCATCTCTAGCAGATCCCGT 59.035 55.000 0.00 0.00 40.20 5.28
2577 4462 2.163509 GCATCTCTAGCAGATCCCGTA 58.836 52.381 0.00 0.00 40.20 4.02
2578 4463 2.757868 GCATCTCTAGCAGATCCCGTAT 59.242 50.000 0.00 0.00 40.20 3.06
2579 4464 3.948473 GCATCTCTAGCAGATCCCGTATA 59.052 47.826 0.00 0.00 40.20 1.47
2580 4465 4.201970 GCATCTCTAGCAGATCCCGTATAC 60.202 50.000 0.00 0.00 40.20 1.47
2581 4466 3.952931 TCTCTAGCAGATCCCGTATACC 58.047 50.000 0.00 0.00 0.00 2.73
2582 4467 3.018149 CTCTAGCAGATCCCGTATACCC 58.982 54.545 0.00 0.00 0.00 3.69
2583 4468 2.648304 TCTAGCAGATCCCGTATACCCT 59.352 50.000 0.00 0.00 0.00 4.34
2584 4469 1.633774 AGCAGATCCCGTATACCCTG 58.366 55.000 0.00 0.00 0.00 4.45
2585 4470 1.133136 AGCAGATCCCGTATACCCTGT 60.133 52.381 0.00 0.00 0.00 4.00
2586 4471 1.272769 GCAGATCCCGTATACCCTGTC 59.727 57.143 0.00 0.00 0.00 3.51
2587 4472 1.893801 CAGATCCCGTATACCCTGTCC 59.106 57.143 0.00 0.00 0.00 4.02
2588 4473 1.203149 AGATCCCGTATACCCTGTCCC 60.203 57.143 0.00 0.00 0.00 4.46
2589 4474 0.541296 ATCCCGTATACCCTGTCCCG 60.541 60.000 0.00 0.00 0.00 5.14
2590 4475 2.732658 CCGTATACCCTGTCCCGC 59.267 66.667 0.00 0.00 0.00 6.13
2591 4476 2.129146 CCGTATACCCTGTCCCGCA 61.129 63.158 0.00 0.00 0.00 5.69
2592 4477 1.678598 CCGTATACCCTGTCCCGCAA 61.679 60.000 0.00 0.00 0.00 4.85
2593 4478 0.176219 CGTATACCCTGTCCCGCAAA 59.824 55.000 0.00 0.00 0.00 3.68
2594 4479 1.405797 CGTATACCCTGTCCCGCAAAA 60.406 52.381 0.00 0.00 0.00 2.44
2595 4480 2.713877 GTATACCCTGTCCCGCAAAAA 58.286 47.619 0.00 0.00 0.00 1.94
2596 4481 2.525105 ATACCCTGTCCCGCAAAAAT 57.475 45.000 0.00 0.00 0.00 1.82
2597 4482 1.828979 TACCCTGTCCCGCAAAAATC 58.171 50.000 0.00 0.00 0.00 2.17
2598 4483 0.178975 ACCCTGTCCCGCAAAAATCA 60.179 50.000 0.00 0.00 0.00 2.57
2599 4484 0.527565 CCCTGTCCCGCAAAAATCAG 59.472 55.000 0.00 0.00 0.00 2.90
2600 4485 1.247567 CCTGTCCCGCAAAAATCAGT 58.752 50.000 0.00 0.00 0.00 3.41
2601 4486 1.613437 CCTGTCCCGCAAAAATCAGTT 59.387 47.619 0.00 0.00 0.00 3.16
2602 4487 2.035832 CCTGTCCCGCAAAAATCAGTTT 59.964 45.455 0.00 0.00 0.00 2.66
2603 4488 3.254657 CCTGTCCCGCAAAAATCAGTTTA 59.745 43.478 0.00 0.00 0.00 2.01
2604 4489 4.261825 CCTGTCCCGCAAAAATCAGTTTAA 60.262 41.667 0.00 0.00 0.00 1.52
2605 4490 5.263968 TGTCCCGCAAAAATCAGTTTAAA 57.736 34.783 0.00 0.00 0.00 1.52
2606 4491 5.285651 TGTCCCGCAAAAATCAGTTTAAAG 58.714 37.500 0.00 0.00 0.00 1.85
2607 4492 4.684242 GTCCCGCAAAAATCAGTTTAAAGG 59.316 41.667 0.00 0.00 0.00 3.11
2608 4493 4.585162 TCCCGCAAAAATCAGTTTAAAGGA 59.415 37.500 0.00 0.00 0.00 3.36
2609 4494 5.245075 TCCCGCAAAAATCAGTTTAAAGGAT 59.755 36.000 0.00 0.00 0.00 3.24
2610 4495 6.434652 TCCCGCAAAAATCAGTTTAAAGGATA 59.565 34.615 3.44 0.00 0.00 2.59
2611 4496 6.530181 CCCGCAAAAATCAGTTTAAAGGATAC 59.470 38.462 3.44 0.00 0.00 2.24
2612 4497 6.530181 CCGCAAAAATCAGTTTAAAGGATACC 59.470 38.462 3.44 0.00 37.17 2.73
2613 4498 6.250527 CGCAAAAATCAGTTTAAAGGATACCG 59.749 38.462 3.44 0.00 37.17 4.02
2614 4499 6.034577 GCAAAAATCAGTTTAAAGGATACCGC 59.965 38.462 3.44 2.20 37.17 5.68
2615 4500 6.827586 AAAATCAGTTTAAAGGATACCGCA 57.172 33.333 3.44 0.00 37.17 5.69
2616 4501 6.827586 AAATCAGTTTAAAGGATACCGCAA 57.172 33.333 3.44 0.00 37.17 4.85
2617 4502 6.827586 AATCAGTTTAAAGGATACCGCAAA 57.172 33.333 3.44 0.00 37.17 3.68
2618 4503 6.827586 ATCAGTTTAAAGGATACCGCAAAA 57.172 33.333 1.43 0.00 37.17 2.44
2619 4504 6.827586 TCAGTTTAAAGGATACCGCAAAAT 57.172 33.333 0.00 0.00 37.17 1.82
2620 4505 6.616947 TCAGTTTAAAGGATACCGCAAAATG 58.383 36.000 0.00 0.00 37.17 2.32
2621 4506 6.207810 TCAGTTTAAAGGATACCGCAAAATGT 59.792 34.615 0.00 0.00 37.17 2.71
2622 4507 6.866248 CAGTTTAAAGGATACCGCAAAATGTT 59.134 34.615 0.00 0.00 37.17 2.71
2623 4508 7.061789 CAGTTTAAAGGATACCGCAAAATGTTC 59.938 37.037 0.00 0.00 37.17 3.18
2624 4509 4.450082 AAAGGATACCGCAAAATGTTCC 57.550 40.909 0.00 0.00 37.17 3.62
2625 4510 3.366052 AGGATACCGCAAAATGTTCCT 57.634 42.857 0.00 0.00 37.17 3.36
2626 4511 3.697166 AGGATACCGCAAAATGTTCCTT 58.303 40.909 0.00 0.00 37.17 3.36
2627 4512 4.086457 AGGATACCGCAAAATGTTCCTTT 58.914 39.130 0.00 0.00 37.17 3.11
2628 4513 4.526650 AGGATACCGCAAAATGTTCCTTTT 59.473 37.500 0.00 0.00 37.17 2.27
2629 4514 5.011635 AGGATACCGCAAAATGTTCCTTTTT 59.988 36.000 0.00 0.00 37.17 1.94
2630 4515 6.209788 AGGATACCGCAAAATGTTCCTTTTTA 59.790 34.615 0.00 0.00 37.17 1.52
2631 4516 6.530181 GGATACCGCAAAATGTTCCTTTTTAG 59.470 38.462 0.00 0.00 0.00 1.85
2632 4517 4.055360 ACCGCAAAATGTTCCTTTTTAGC 58.945 39.130 0.00 0.00 0.00 3.09
2633 4518 4.054671 CCGCAAAATGTTCCTTTTTAGCA 58.945 39.130 0.00 0.00 0.00 3.49
2634 4519 4.690280 CCGCAAAATGTTCCTTTTTAGCAT 59.310 37.500 0.00 0.00 0.00 3.79
2635 4520 5.179182 CCGCAAAATGTTCCTTTTTAGCATT 59.821 36.000 0.00 0.00 0.00 3.56
2636 4521 6.293353 CCGCAAAATGTTCCTTTTTAGCATTT 60.293 34.615 0.00 0.00 40.23 2.32
2637 4522 7.131565 CGCAAAATGTTCCTTTTTAGCATTTT 58.868 30.769 0.00 0.00 45.08 1.82
2638 4523 7.643371 CGCAAAATGTTCCTTTTTAGCATTTTT 59.357 29.630 9.82 0.00 43.09 1.94
2639 4524 9.943163 GCAAAATGTTCCTTTTTAGCATTTTTA 57.057 25.926 9.82 0.00 43.09 1.52
2642 4527 7.883229 ATGTTCCTTTTTAGCATTTTTACCG 57.117 32.000 0.00 0.00 0.00 4.02
2643 4528 6.807789 TGTTCCTTTTTAGCATTTTTACCGT 58.192 32.000 0.00 0.00 0.00 4.83
2644 4529 7.938715 TGTTCCTTTTTAGCATTTTTACCGTA 58.061 30.769 0.00 0.00 0.00 4.02
2645 4530 8.578151 TGTTCCTTTTTAGCATTTTTACCGTAT 58.422 29.630 0.00 0.00 0.00 3.06
2646 4531 8.856247 GTTCCTTTTTAGCATTTTTACCGTATG 58.144 33.333 0.00 0.00 0.00 2.39
2647 4532 8.338072 TCCTTTTTAGCATTTTTACCGTATGA 57.662 30.769 0.00 0.00 0.00 2.15
2648 4533 8.238631 TCCTTTTTAGCATTTTTACCGTATGAC 58.761 33.333 0.00 0.00 0.00 3.06
2649 4534 8.241367 CCTTTTTAGCATTTTTACCGTATGACT 58.759 33.333 0.00 0.00 0.00 3.41
2650 4535 9.620660 CTTTTTAGCATTTTTACCGTATGACTT 57.379 29.630 0.00 0.00 0.00 3.01
2651 4536 9.968870 TTTTTAGCATTTTTACCGTATGACTTT 57.031 25.926 0.00 0.00 0.00 2.66
2652 4537 9.968870 TTTTAGCATTTTTACCGTATGACTTTT 57.031 25.926 0.00 0.00 0.00 2.27
2653 4538 8.958175 TTAGCATTTTTACCGTATGACTTTTG 57.042 30.769 0.00 0.00 0.00 2.44
2654 4539 6.977213 AGCATTTTTACCGTATGACTTTTGT 58.023 32.000 0.00 0.00 0.00 2.83
2655 4540 7.430441 AGCATTTTTACCGTATGACTTTTGTT 58.570 30.769 0.00 0.00 0.00 2.83
2656 4541 7.923878 AGCATTTTTACCGTATGACTTTTGTTT 59.076 29.630 0.00 0.00 0.00 2.83
2657 4542 8.211838 GCATTTTTACCGTATGACTTTTGTTTC 58.788 33.333 0.00 0.00 0.00 2.78
2658 4543 7.895582 TTTTTACCGTATGACTTTTGTTTCG 57.104 32.000 0.00 0.00 0.00 3.46
2659 4544 5.594724 TTACCGTATGACTTTTGTTTCGG 57.405 39.130 0.00 0.00 41.95 4.30
2660 4545 2.224784 ACCGTATGACTTTTGTTTCGGC 59.775 45.455 0.00 0.00 40.25 5.54
2661 4546 2.224549 CCGTATGACTTTTGTTTCGGCA 59.775 45.455 0.00 0.00 0.00 5.69
2662 4547 3.479006 CGTATGACTTTTGTTTCGGCAG 58.521 45.455 0.00 0.00 0.00 4.85
2663 4548 3.185594 CGTATGACTTTTGTTTCGGCAGA 59.814 43.478 0.00 0.00 0.00 4.26
2664 4549 4.319190 CGTATGACTTTTGTTTCGGCAGAA 60.319 41.667 0.00 0.00 33.98 3.02
2665 4550 3.414549 TGACTTTTGTTTCGGCAGAAC 57.585 42.857 0.00 0.00 35.86 3.01
2666 4551 2.750166 TGACTTTTGTTTCGGCAGAACA 59.250 40.909 0.00 0.00 35.86 3.18
2667 4552 3.181501 TGACTTTTGTTTCGGCAGAACAG 60.182 43.478 0.00 0.00 35.86 3.16
2668 4553 3.013921 ACTTTTGTTTCGGCAGAACAGA 58.986 40.909 0.00 0.00 35.86 3.41
2669 4554 3.181500 ACTTTTGTTTCGGCAGAACAGAC 60.181 43.478 0.00 0.00 35.86 3.51
2670 4555 1.305201 TTGTTTCGGCAGAACAGACC 58.695 50.000 0.00 0.00 35.86 3.85
2671 4556 0.534203 TGTTTCGGCAGAACAGACCC 60.534 55.000 0.00 0.00 35.86 4.46
2672 4557 1.301401 TTTCGGCAGAACAGACCCG 60.301 57.895 0.00 0.00 41.97 5.28
2673 4558 2.035237 TTTCGGCAGAACAGACCCGT 62.035 55.000 0.00 0.00 41.38 5.28
2674 4559 1.180456 TTCGGCAGAACAGACCCGTA 61.180 55.000 0.00 0.00 41.38 4.02
2675 4560 1.180456 TCGGCAGAACAGACCCGTAA 61.180 55.000 0.00 0.00 41.38 3.18
2676 4561 0.320073 CGGCAGAACAGACCCGTAAA 60.320 55.000 0.00 0.00 36.18 2.01
2677 4562 1.874739 CGGCAGAACAGACCCGTAAAA 60.875 52.381 0.00 0.00 36.18 1.52
2678 4563 2.433436 GGCAGAACAGACCCGTAAAAT 58.567 47.619 0.00 0.00 0.00 1.82
2679 4564 3.602483 GGCAGAACAGACCCGTAAAATA 58.398 45.455 0.00 0.00 0.00 1.40
2680 4565 4.196971 GGCAGAACAGACCCGTAAAATAT 58.803 43.478 0.00 0.00 0.00 1.28
2681 4566 4.638865 GGCAGAACAGACCCGTAAAATATT 59.361 41.667 0.00 0.00 0.00 1.28
2682 4567 5.124936 GGCAGAACAGACCCGTAAAATATTT 59.875 40.000 0.00 0.00 0.00 1.40
2683 4568 6.349860 GGCAGAACAGACCCGTAAAATATTTT 60.350 38.462 17.18 17.18 0.00 1.82
2684 4569 7.148205 GGCAGAACAGACCCGTAAAATATTTTA 60.148 37.037 15.19 15.19 0.00 1.52
2685 4570 8.403236 GCAGAACAGACCCGTAAAATATTTTAT 58.597 33.333 20.60 7.53 35.35 1.40
2690 4575 8.680001 ACAGACCCGTAAAATATTTTATTGTCC 58.320 33.333 25.01 16.21 35.35 4.02
2691 4576 8.132995 CAGACCCGTAAAATATTTTATTGTCCC 58.867 37.037 25.01 13.86 35.35 4.46
2692 4577 7.012610 AGACCCGTAAAATATTTTATTGTCCCG 59.987 37.037 25.01 20.41 35.35 5.14
2693 4578 6.039605 ACCCGTAAAATATTTTATTGTCCCGG 59.960 38.462 24.53 24.53 35.93 5.73
2694 4579 6.039605 CCCGTAAAATATTTTATTGTCCCGGT 59.960 38.462 26.78 5.66 35.13 5.28
2695 4580 7.228308 CCCGTAAAATATTTTATTGTCCCGGTA 59.772 37.037 26.78 6.25 35.13 4.02
2696 4581 8.619546 CCGTAAAATATTTTATTGTCCCGGTAA 58.380 33.333 23.82 0.00 35.35 2.85
2702 4587 8.880878 ATATTTTATTGTCCCGGTAAAATTGC 57.119 30.769 19.10 0.00 38.37 3.56
2703 4588 5.723672 TTTATTGTCCCGGTAAAATTGCA 57.276 34.783 0.00 0.00 0.00 4.08
2704 4589 3.586100 ATTGTCCCGGTAAAATTGCAC 57.414 42.857 0.00 0.00 0.00 4.57
2705 4590 1.982660 TGTCCCGGTAAAATTGCACA 58.017 45.000 0.00 0.00 0.00 4.57
2706 4591 2.307768 TGTCCCGGTAAAATTGCACAA 58.692 42.857 0.00 0.00 0.00 3.33
2707 4592 2.693591 TGTCCCGGTAAAATTGCACAAA 59.306 40.909 0.00 0.00 0.00 2.83
2708 4593 3.054166 GTCCCGGTAAAATTGCACAAAC 58.946 45.455 0.00 0.00 0.00 2.93
2709 4594 2.036089 TCCCGGTAAAATTGCACAAACC 59.964 45.455 0.00 0.00 0.00 3.27
2711 4596 1.453900 CGGTAAAATTGCACAAACCGC 59.546 47.619 10.42 0.00 42.75 5.68
2712 4597 1.795872 GGTAAAATTGCACAAACCGCC 59.204 47.619 0.00 0.00 0.00 6.13
2713 4598 1.795872 GTAAAATTGCACAAACCGCCC 59.204 47.619 0.00 0.00 0.00 6.13
2714 4599 0.467804 AAAATTGCACAAACCGCCCT 59.532 45.000 0.00 0.00 0.00 5.19
2715 4600 1.333177 AAATTGCACAAACCGCCCTA 58.667 45.000 0.00 0.00 0.00 3.53
2716 4601 1.333177 AATTGCACAAACCGCCCTAA 58.667 45.000 0.00 0.00 0.00 2.69
2717 4602 1.333177 ATTGCACAAACCGCCCTAAA 58.667 45.000 0.00 0.00 0.00 1.85
2718 4603 1.112113 TTGCACAAACCGCCCTAAAA 58.888 45.000 0.00 0.00 0.00 1.52
2719 4604 1.112113 TGCACAAACCGCCCTAAAAA 58.888 45.000 0.00 0.00 0.00 1.94
2720 4605 1.202428 TGCACAAACCGCCCTAAAAAC 60.202 47.619 0.00 0.00 0.00 2.43
2721 4606 1.761206 CACAAACCGCCCTAAAAACG 58.239 50.000 0.00 0.00 0.00 3.60
2722 4607 1.065851 CACAAACCGCCCTAAAAACGT 59.934 47.619 0.00 0.00 0.00 3.99
2723 4608 1.750206 ACAAACCGCCCTAAAAACGTT 59.250 42.857 0.00 0.00 0.00 3.99
2724 4609 2.223548 ACAAACCGCCCTAAAAACGTTC 60.224 45.455 0.00 0.00 0.00 3.95
2725 4610 0.587768 AACCGCCCTAAAAACGTTCG 59.412 50.000 0.00 0.00 0.00 3.95
2726 4611 0.532640 ACCGCCCTAAAAACGTTCGT 60.533 50.000 0.00 0.00 0.00 3.85
2727 4612 0.164432 CCGCCCTAAAAACGTTCGTC 59.836 55.000 0.00 0.00 0.00 4.20
2728 4613 1.142474 CGCCCTAAAAACGTTCGTCT 58.858 50.000 0.00 0.00 0.00 4.18
2729 4614 1.125566 CGCCCTAAAAACGTTCGTCTC 59.874 52.381 0.00 0.00 0.00 3.36
2730 4615 1.125566 GCCCTAAAAACGTTCGTCTCG 59.874 52.381 0.00 0.00 0.00 4.04
2731 4616 2.664916 CCCTAAAAACGTTCGTCTCGA 58.335 47.619 0.00 0.00 0.00 4.04
2732 4617 2.406357 CCCTAAAAACGTTCGTCTCGAC 59.594 50.000 0.00 0.00 34.89 4.20
2733 4618 2.406357 CCTAAAAACGTTCGTCTCGACC 59.594 50.000 0.00 0.00 34.89 4.79
2734 4619 0.848305 AAAAACGTTCGTCTCGACCG 59.152 50.000 0.00 7.45 46.33 4.79
2735 4620 1.543106 AAAACGTTCGTCTCGACCGC 61.543 55.000 0.00 0.00 44.92 5.68
2736 4621 2.398128 AAACGTTCGTCTCGACCGCT 62.398 55.000 0.00 0.00 44.92 5.52
2737 4622 2.573689 CGTTCGTCTCGACCGCTC 60.574 66.667 0.00 0.00 34.87 5.03
2738 4623 2.202453 GTTCGTCTCGACCGCTCC 60.202 66.667 0.00 0.00 34.89 4.70
2739 4624 3.437795 TTCGTCTCGACCGCTCCC 61.438 66.667 0.00 0.00 34.89 4.30
2740 4625 4.710167 TCGTCTCGACCGCTCCCA 62.710 66.667 0.00 0.00 0.00 4.37
2741 4626 3.518998 CGTCTCGACCGCTCCCAT 61.519 66.667 0.00 0.00 0.00 4.00
2742 4627 2.413765 GTCTCGACCGCTCCCATC 59.586 66.667 0.00 0.00 0.00 3.51
2743 4628 3.209812 TCTCGACCGCTCCCATCG 61.210 66.667 0.00 0.00 37.20 3.84
2744 4629 4.933064 CTCGACCGCTCCCATCGC 62.933 72.222 0.00 0.00 35.82 4.58
2751 4636 3.867771 GCTCCCATCGCGATGATC 58.132 61.111 42.44 25.75 41.20 2.92
2752 4637 1.291588 GCTCCCATCGCGATGATCT 59.708 57.895 42.44 12.40 41.20 2.75
2753 4638 0.320247 GCTCCCATCGCGATGATCTT 60.320 55.000 42.44 11.57 41.20 2.40
2754 4639 1.426423 CTCCCATCGCGATGATCTTG 58.574 55.000 42.44 27.53 41.20 3.02
2755 4640 0.752658 TCCCATCGCGATGATCTTGT 59.247 50.000 42.44 9.91 41.20 3.16
2756 4641 1.143305 CCCATCGCGATGATCTTGTC 58.857 55.000 42.44 0.00 41.20 3.18
2757 4642 1.538849 CCCATCGCGATGATCTTGTCA 60.539 52.381 42.44 4.21 41.20 3.58
2758 4643 1.791204 CCATCGCGATGATCTTGTCAG 59.209 52.381 42.44 22.72 40.92 3.51
2759 4644 1.791204 CATCGCGATGATCTTGTCAGG 59.209 52.381 39.24 11.55 40.92 3.86
2760 4645 0.103026 TCGCGATGATCTTGTCAGGG 59.897 55.000 3.71 0.00 40.92 4.45
2761 4646 0.103026 CGCGATGATCTTGTCAGGGA 59.897 55.000 0.00 0.00 40.92 4.20
2762 4647 1.576356 GCGATGATCTTGTCAGGGAC 58.424 55.000 0.00 0.00 40.92 4.46
2763 4648 1.134699 GCGATGATCTTGTCAGGGACA 60.135 52.381 0.00 0.00 40.92 4.02
2771 4656 3.569827 TGTCAGGGACAAAGGAGGA 57.430 52.632 0.00 0.00 39.78 3.71
2772 4657 1.352083 TGTCAGGGACAAAGGAGGAG 58.648 55.000 0.00 0.00 39.78 3.69
2773 4658 0.035915 GTCAGGGACAAAGGAGGAGC 60.036 60.000 0.00 0.00 32.09 4.70
2774 4659 1.078848 CAGGGACAAAGGAGGAGCG 60.079 63.158 0.00 0.00 0.00 5.03
2775 4660 1.536662 AGGGACAAAGGAGGAGCGT 60.537 57.895 0.00 0.00 0.00 5.07
2776 4661 1.376037 GGGACAAAGGAGGAGCGTG 60.376 63.158 0.00 0.00 0.00 5.34
2777 4662 2.035442 GGACAAAGGAGGAGCGTGC 61.035 63.158 0.00 0.00 0.00 5.34
2778 4663 2.357517 ACAAAGGAGGAGCGTGCG 60.358 61.111 0.00 0.00 0.00 5.34
2779 4664 2.357517 CAAAGGAGGAGCGTGCGT 60.358 61.111 0.00 0.00 0.00 5.24
2780 4665 2.048127 AAAGGAGGAGCGTGCGTC 60.048 61.111 0.00 0.00 0.00 5.19
2781 4666 2.574955 AAAGGAGGAGCGTGCGTCT 61.575 57.895 0.00 0.00 0.00 4.18
2782 4667 2.100879 AAAGGAGGAGCGTGCGTCTT 62.101 55.000 0.00 0.00 0.00 3.01
2783 4668 2.771763 AAGGAGGAGCGTGCGTCTTG 62.772 60.000 0.00 0.00 0.00 3.02
2784 4669 3.482783 GAGGAGCGTGCGTCTTGC 61.483 66.667 0.00 0.00 46.70 4.01
2791 4676 3.712881 GTGCGTCTTGCCGGTGAC 61.713 66.667 1.90 8.75 45.60 3.67
2792 4677 4.228567 TGCGTCTTGCCGGTGACA 62.229 61.111 19.00 1.21 45.60 3.58
2793 4678 2.970324 GCGTCTTGCCGGTGACAA 60.970 61.111 19.00 8.52 37.76 3.18
2794 4679 2.935955 CGTCTTGCCGGTGACAAC 59.064 61.111 19.00 5.86 33.18 3.32
2795 4680 2.935955 GTCTTGCCGGTGACAACG 59.064 61.111 5.74 5.74 33.75 4.10
2796 4681 2.970324 TCTTGCCGGTGACAACGC 60.970 61.111 7.56 3.78 0.00 4.84
2797 4682 2.972505 CTTGCCGGTGACAACGCT 60.973 61.111 7.56 0.00 0.00 5.07
2798 4683 3.240606 CTTGCCGGTGACAACGCTG 62.241 63.158 7.56 0.00 0.00 5.18
2802 4687 3.049674 CGGTGACAACGCTGCCAT 61.050 61.111 0.00 0.00 0.00 4.40
2803 4688 2.562912 GGTGACAACGCTGCCATG 59.437 61.111 0.00 0.00 0.00 3.66
2804 4689 2.562912 GTGACAACGCTGCCATGG 59.437 61.111 7.63 7.63 0.00 3.66
2805 4690 1.965930 GTGACAACGCTGCCATGGA 60.966 57.895 18.40 0.00 0.00 3.41
2806 4691 1.672030 TGACAACGCTGCCATGGAG 60.672 57.895 18.40 11.30 0.00 3.86
2807 4692 3.044059 GACAACGCTGCCATGGAGC 62.044 63.158 18.40 19.54 0.00 4.70
2808 4693 3.057548 CAACGCTGCCATGGAGCA 61.058 61.111 25.86 14.43 41.46 4.26
2809 4694 2.282391 AACGCTGCCATGGAGCAA 60.282 55.556 25.86 6.79 43.52 3.91
2810 4695 2.338015 AACGCTGCCATGGAGCAAG 61.338 57.895 25.86 17.20 43.52 4.01
2811 4696 2.437180 CGCTGCCATGGAGCAAGA 60.437 61.111 25.86 1.77 43.52 3.02
2812 4697 2.758089 CGCTGCCATGGAGCAAGAC 61.758 63.158 25.86 6.65 43.52 3.01
2813 4698 1.676635 GCTGCCATGGAGCAAGACA 60.677 57.895 18.40 0.17 43.52 3.41
2814 4699 1.654954 GCTGCCATGGAGCAAGACAG 61.655 60.000 18.40 12.32 43.52 3.51
2815 4700 0.035725 CTGCCATGGAGCAAGACAGA 60.036 55.000 18.40 0.00 43.52 3.41
2816 4701 0.035725 TGCCATGGAGCAAGACAGAG 60.036 55.000 18.40 0.00 40.56 3.35
2817 4702 0.747283 GCCATGGAGCAAGACAGAGG 60.747 60.000 18.40 0.00 0.00 3.69
2818 4703 0.907486 CCATGGAGCAAGACAGAGGA 59.093 55.000 5.56 0.00 0.00 3.71
2819 4704 1.406614 CCATGGAGCAAGACAGAGGAC 60.407 57.143 5.56 0.00 0.00 3.85
2820 4705 0.908198 ATGGAGCAAGACAGAGGACC 59.092 55.000 0.00 0.00 0.00 4.46
2821 4706 0.471780 TGGAGCAAGACAGAGGACCA 60.472 55.000 0.00 0.00 0.00 4.02
2822 4707 0.036858 GGAGCAAGACAGAGGACCAC 60.037 60.000 0.00 0.00 0.00 4.16
2823 4708 0.389166 GAGCAAGACAGAGGACCACG 60.389 60.000 0.00 0.00 0.00 4.94
2824 4709 1.374758 GCAAGACAGAGGACCACGG 60.375 63.158 0.00 0.00 0.00 4.94
2825 4710 1.293498 CAAGACAGAGGACCACGGG 59.707 63.158 0.00 0.00 0.00 5.28
2826 4711 1.913762 AAGACAGAGGACCACGGGG 60.914 63.158 0.00 0.00 41.29 5.73
2827 4712 2.283676 GACAGAGGACCACGGGGA 60.284 66.667 12.96 0.00 38.05 4.81
2828 4713 1.686110 GACAGAGGACCACGGGGAT 60.686 63.158 12.96 0.00 38.05 3.85
2829 4714 1.961180 GACAGAGGACCACGGGGATG 61.961 65.000 12.96 3.14 38.05 3.51
2830 4715 2.365635 AGAGGACCACGGGGATGG 60.366 66.667 12.96 0.00 46.10 3.51
2831 4716 2.365105 GAGGACCACGGGGATGGA 60.365 66.667 12.96 0.00 43.02 3.41
2832 4717 1.766461 GAGGACCACGGGGATGGAT 60.766 63.158 12.96 0.00 43.02 3.41
2833 4718 2.044806 GAGGACCACGGGGATGGATG 62.045 65.000 12.96 0.00 43.02 3.51
2834 4719 2.510906 GACCACGGGGATGGATGG 59.489 66.667 12.96 0.00 43.02 3.51
2835 4720 2.286121 ACCACGGGGATGGATGGT 60.286 61.111 12.96 0.00 43.02 3.55
2836 4721 1.003704 ACCACGGGGATGGATGGTA 59.996 57.895 12.96 0.00 43.72 3.25
2837 4722 1.054406 ACCACGGGGATGGATGGTAG 61.054 60.000 12.96 0.00 43.72 3.18
2838 4723 1.071471 CACGGGGATGGATGGTAGC 59.929 63.158 0.00 0.00 0.00 3.58
2839 4724 1.074471 ACGGGGATGGATGGTAGCT 60.074 57.895 0.00 0.00 0.00 3.32
2840 4725 0.190069 ACGGGGATGGATGGTAGCTA 59.810 55.000 0.00 0.00 0.00 3.32
2841 4726 0.898320 CGGGGATGGATGGTAGCTAG 59.102 60.000 0.00 0.00 0.00 3.42
2842 4727 0.615850 GGGGATGGATGGTAGCTAGC 59.384 60.000 16.08 16.08 0.00 3.42
2843 4728 1.650528 GGGATGGATGGTAGCTAGCT 58.349 55.000 23.12 23.12 0.00 3.32
2844 4729 2.559931 GGGGATGGATGGTAGCTAGCTA 60.560 54.545 20.67 20.67 0.00 3.32
2845 4730 2.763448 GGGATGGATGGTAGCTAGCTAG 59.237 54.545 24.78 16.84 0.00 3.42
2854 4739 3.597728 GCTAGCTAGCTCGCGGGT 61.598 66.667 33.71 6.16 45.62 5.28
2855 4740 2.333225 CTAGCTAGCTCGCGGGTG 59.667 66.667 23.26 0.00 34.40 4.61
2856 4741 3.200887 CTAGCTAGCTCGCGGGTGG 62.201 68.421 23.26 6.82 34.40 4.61
2907 4792 4.796495 GCGGCGGGGGTGAGATTT 62.796 66.667 9.78 0.00 0.00 2.17
2908 4793 2.824041 CGGCGGGGGTGAGATTTG 60.824 66.667 0.00 0.00 0.00 2.32
2909 4794 2.440247 GGCGGGGGTGAGATTTGG 60.440 66.667 0.00 0.00 0.00 3.28
2910 4795 3.140814 GCGGGGGTGAGATTTGGC 61.141 66.667 0.00 0.00 0.00 4.52
2911 4796 2.440247 CGGGGGTGAGATTTGGCC 60.440 66.667 0.00 0.00 0.00 5.36
2912 4797 2.440247 GGGGGTGAGATTTGGCCG 60.440 66.667 0.00 0.00 0.00 6.13
2913 4798 2.440247 GGGGTGAGATTTGGCCGG 60.440 66.667 0.00 0.00 0.00 6.13
2914 4799 2.674754 GGGTGAGATTTGGCCGGA 59.325 61.111 5.05 0.00 0.00 5.14
2915 4800 1.001393 GGGTGAGATTTGGCCGGAA 60.001 57.895 5.05 0.00 0.00 4.30
2916 4801 0.395724 GGGTGAGATTTGGCCGGAAT 60.396 55.000 5.05 0.12 0.00 3.01
2917 4802 1.025041 GGTGAGATTTGGCCGGAATC 58.975 55.000 18.98 18.98 34.48 2.52
2918 4803 1.681780 GGTGAGATTTGGCCGGAATCA 60.682 52.381 25.05 12.28 36.26 2.57
2919 4804 2.091541 GTGAGATTTGGCCGGAATCAA 58.908 47.619 25.05 14.74 36.26 2.57
2920 4805 2.098117 GTGAGATTTGGCCGGAATCAAG 59.902 50.000 25.05 0.00 36.26 3.02
2921 4806 1.066152 GAGATTTGGCCGGAATCAAGC 59.934 52.381 25.05 14.57 36.26 4.01
2922 4807 1.106285 GATTTGGCCGGAATCAAGCT 58.894 50.000 20.78 0.00 34.44 3.74
2923 4808 1.066152 GATTTGGCCGGAATCAAGCTC 59.934 52.381 20.78 3.92 34.44 4.09
2924 4809 1.305219 TTTGGCCGGAATCAAGCTCG 61.305 55.000 5.05 0.00 0.00 5.03
2925 4810 2.897350 GGCCGGAATCAAGCTCGG 60.897 66.667 5.05 4.98 44.70 4.63
2926 4811 2.897350 GCCGGAATCAAGCTCGGG 60.897 66.667 5.05 2.22 42.43 5.14
2927 4812 2.900273 CCGGAATCAAGCTCGGGA 59.100 61.111 0.00 0.00 38.93 5.14
2928 4813 1.220749 CCGGAATCAAGCTCGGGAA 59.779 57.895 0.00 0.00 38.93 3.97
2929 4814 0.811616 CCGGAATCAAGCTCGGGAAG 60.812 60.000 0.00 0.00 38.93 3.46
2930 4815 0.108138 CGGAATCAAGCTCGGGAAGT 60.108 55.000 0.00 0.00 0.00 3.01
2931 4816 1.657822 GGAATCAAGCTCGGGAAGTC 58.342 55.000 0.00 0.00 0.00 3.01
2932 4817 1.066143 GGAATCAAGCTCGGGAAGTCA 60.066 52.381 0.00 0.00 0.00 3.41
2933 4818 2.420687 GGAATCAAGCTCGGGAAGTCAT 60.421 50.000 0.00 0.00 0.00 3.06
2934 4819 2.322355 ATCAAGCTCGGGAAGTCATG 57.678 50.000 0.00 0.00 0.00 3.07
2935 4820 0.250234 TCAAGCTCGGGAAGTCATGG 59.750 55.000 0.00 0.00 0.00 3.66
2936 4821 0.036010 CAAGCTCGGGAAGTCATGGT 60.036 55.000 0.00 0.00 0.00 3.55
2937 4822 0.036010 AAGCTCGGGAAGTCATGGTG 60.036 55.000 0.00 0.00 0.00 4.17
2938 4823 1.194781 AGCTCGGGAAGTCATGGTGT 61.195 55.000 0.00 0.00 0.00 4.16
2939 4824 0.741221 GCTCGGGAAGTCATGGTGTC 60.741 60.000 0.00 0.00 0.00 3.67
2940 4825 0.458543 CTCGGGAAGTCATGGTGTCG 60.459 60.000 0.00 0.00 0.00 4.35
2941 4826 1.447838 CGGGAAGTCATGGTGTCGG 60.448 63.158 0.00 0.00 0.00 4.79
2942 4827 1.745489 GGGAAGTCATGGTGTCGGC 60.745 63.158 0.00 0.00 0.00 5.54
2943 4828 1.296715 GGAAGTCATGGTGTCGGCT 59.703 57.895 0.00 0.00 0.00 5.52
2944 4829 1.021390 GGAAGTCATGGTGTCGGCTG 61.021 60.000 0.00 0.00 0.00 4.85
2945 4830 1.639298 GAAGTCATGGTGTCGGCTGC 61.639 60.000 0.00 0.00 0.00 5.25
2946 4831 3.490759 GTCATGGTGTCGGCTGCG 61.491 66.667 0.00 0.00 0.00 5.18
2947 4832 3.690280 TCATGGTGTCGGCTGCGA 61.690 61.111 0.00 0.00 0.00 5.10
2948 4833 3.190849 CATGGTGTCGGCTGCGAG 61.191 66.667 0.00 0.00 0.00 5.03
2949 4834 4.457496 ATGGTGTCGGCTGCGAGG 62.457 66.667 0.00 0.00 0.00 4.63
2951 4836 4.373116 GGTGTCGGCTGCGAGGAA 62.373 66.667 0.00 0.00 0.00 3.36
2952 4837 2.357034 GTGTCGGCTGCGAGGAAA 60.357 61.111 0.00 0.00 0.00 3.13
2953 4838 2.048222 TGTCGGCTGCGAGGAAAG 60.048 61.111 0.00 0.00 0.00 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 77 1.412361 CCTCGGAGGAAGGAAGGAGAT 60.412 57.143 19.57 0.00 37.67 2.75
102 103 2.554032 GTGATGCAAACAACCTAGCTGT 59.446 45.455 0.00 0.00 0.00 4.40
117 118 1.226491 GTTGATGCTGCGGTGATGC 60.226 57.895 0.00 0.00 0.00 3.91
152 153 3.319122 GCCCTAGCGGAATTGATTGATTT 59.681 43.478 1.75 0.00 0.00 2.17
153 154 2.887152 GCCCTAGCGGAATTGATTGATT 59.113 45.455 1.75 0.00 0.00 2.57
154 155 2.158623 TGCCCTAGCGGAATTGATTGAT 60.159 45.455 1.75 0.00 44.31 2.57
178 179 3.416156 GAGAAATTGTGCAGGTCCTCTT 58.584 45.455 0.00 0.00 0.00 2.85
215 216 1.410850 ATCTAGATGGTGTGGCGGGG 61.411 60.000 3.89 0.00 0.00 5.73
248 249 0.320247 GATCATCCTAGCGCCACCTG 60.320 60.000 2.29 0.00 0.00 4.00
365 372 7.039270 GTGCCTAAGGTTTTTCAGAAAAGAAA 58.961 34.615 8.34 0.00 35.53 2.52
366 373 6.406512 GGTGCCTAAGGTTTTTCAGAAAAGAA 60.407 38.462 8.34 0.00 35.53 2.52
452 482 5.755375 AGTACTGAACCAATATGAATGAGCG 59.245 40.000 0.00 0.00 0.00 5.03
483 2286 7.918562 GTCTAAAGACTTGCACAACCAAAATAA 59.081 33.333 2.81 0.00 41.65 1.40
556 2361 7.633801 TCAGATATACACCCTCCCTCTATCTAT 59.366 40.741 0.00 0.00 0.00 1.98
571 2376 5.049818 GCAACTTGCTGGATCAGATATACAC 60.050 44.000 6.50 0.00 40.96 2.90
572 2377 5.059161 GCAACTTGCTGGATCAGATATACA 58.941 41.667 6.50 0.00 40.96 2.29
640 2447 3.993658 TCTGTACCCTGGACATAGGAT 57.006 47.619 0.00 0.00 40.42 3.24
650 2457 2.228822 GTGTGGCAAAATCTGTACCCTG 59.771 50.000 0.00 0.00 0.00 4.45
659 2466 3.503748 AGACTTGCTAGTGTGGCAAAATC 59.496 43.478 5.27 1.11 46.81 2.17
697 2504 5.065988 TCAGTTGGACGGAAGAAAGAAAAAG 59.934 40.000 0.00 0.00 0.00 2.27
712 2521 6.183360 GCTATTACAACAGACATCAGTTGGAC 60.183 42.308 18.01 0.00 44.41 4.02
800 2609 1.455849 CCAGCCTCACCCTTGTTGA 59.544 57.895 0.00 0.00 0.00 3.18
870 2680 3.119245 GCATCAGACAATCCAAGTTGCAT 60.119 43.478 0.00 0.00 32.32 3.96
993 2804 0.032815 TCTTCGACGACATGTTGGCA 59.967 50.000 19.27 3.49 32.34 4.92
1215 3026 0.254178 AGCCACAGGATGCGAGAATT 59.746 50.000 0.00 0.00 42.53 2.17
1248 3059 1.488393 GCAGCCTCCTTCCAGACTATT 59.512 52.381 0.00 0.00 0.00 1.73
1964 3778 4.735132 CGACACGGGCGATGTGGT 62.735 66.667 7.83 0.00 41.64 4.16
1972 3786 2.125832 TCCGAAATCGACACGGGC 60.126 61.111 20.79 0.00 45.61 6.13
2159 4020 5.586243 GCAGGATATAAGCAGTTCAAACAGA 59.414 40.000 0.00 0.00 0.00 3.41
2172 4033 7.223582 CCGATAACAGCTATTGCAGGATATAAG 59.776 40.741 1.12 0.00 42.74 1.73
2185 4046 5.753438 CACACATAACACCGATAACAGCTAT 59.247 40.000 0.00 0.00 0.00 2.97
2207 4070 1.348250 CACACACACACACGAGCAC 59.652 57.895 0.00 0.00 0.00 4.40
2213 4076 2.353579 GGACCTTTACACACACACACAC 59.646 50.000 0.00 0.00 0.00 3.82
2214 4077 2.027100 TGGACCTTTACACACACACACA 60.027 45.455 0.00 0.00 0.00 3.72
2215 4078 2.353579 GTGGACCTTTACACACACACAC 59.646 50.000 0.00 0.00 37.54 3.82
2216 4079 2.634600 GTGGACCTTTACACACACACA 58.365 47.619 0.00 0.00 37.54 3.72
2217 4080 1.595794 CGTGGACCTTTACACACACAC 59.404 52.381 0.00 0.00 37.45 3.82
2218 4081 1.481363 TCGTGGACCTTTACACACACA 59.519 47.619 0.00 0.00 37.45 3.72
2236 4099 3.930400 CATGGTTCCACATGCATCG 57.070 52.632 0.00 0.00 41.43 3.84
2289 4164 1.134401 CAGCCATCAACCTACGGTGAT 60.134 52.381 0.00 0.00 35.34 3.06
2290 4165 0.249120 CAGCCATCAACCTACGGTGA 59.751 55.000 0.00 0.00 35.34 4.02
2297 4172 4.431131 CCGCCCAGCCATCAACCT 62.431 66.667 0.00 0.00 0.00 3.50
2325 4200 1.566018 GGTTCTTTCACGGCCACGAG 61.566 60.000 2.24 0.00 44.60 4.18
2340 4215 2.890766 TTCCCCAGCGTCCAGGTTC 61.891 63.158 0.00 0.00 0.00 3.62
2348 4223 1.247567 CAAGAATTGTTCCCCAGCGT 58.752 50.000 0.00 0.00 42.34 5.07
2400 4275 3.753272 ACGAGGAACAATCAACAATCAGG 59.247 43.478 0.00 0.00 0.00 3.86
2402 4277 4.384940 TGACGAGGAACAATCAACAATCA 58.615 39.130 0.00 0.00 0.00 2.57
2403 4278 5.352569 AGATGACGAGGAACAATCAACAATC 59.647 40.000 0.00 0.00 0.00 2.67
2404 4279 5.248640 AGATGACGAGGAACAATCAACAAT 58.751 37.500 0.00 0.00 0.00 2.71
2405 4280 4.641396 AGATGACGAGGAACAATCAACAA 58.359 39.130 0.00 0.00 0.00 2.83
2406 4281 4.021104 AGAGATGACGAGGAACAATCAACA 60.021 41.667 0.00 0.00 0.00 3.33
2407 4282 4.499183 AGAGATGACGAGGAACAATCAAC 58.501 43.478 0.00 0.00 0.00 3.18
2408 4283 4.382040 GGAGAGATGACGAGGAACAATCAA 60.382 45.833 0.00 0.00 0.00 2.57
2423 4298 5.295292 ACGCAAATAATGAACTGGAGAGATG 59.705 40.000 0.00 0.00 0.00 2.90
2424 4299 5.431765 ACGCAAATAATGAACTGGAGAGAT 58.568 37.500 0.00 0.00 0.00 2.75
2435 4310 1.388547 GGCTGGGACGCAAATAATGA 58.611 50.000 0.00 0.00 0.00 2.57
2437 4312 2.404083 CGGCTGGGACGCAAATAAT 58.596 52.632 0.00 0.00 0.00 1.28
2483 4368 4.803426 GTGAGAGACGCCGGCCAG 62.803 72.222 23.46 10.83 0.00 4.85
2485 4370 4.500116 GAGTGAGAGACGCCGGCC 62.500 72.222 23.46 7.92 0.00 6.13
2486 4371 3.749064 TGAGTGAGAGACGCCGGC 61.749 66.667 19.07 19.07 0.00 6.13
2487 4372 2.179517 GTGAGTGAGAGACGCCGG 59.820 66.667 0.00 0.00 0.00 6.13
2488 4373 2.179517 GGTGAGTGAGAGACGCCG 59.820 66.667 0.00 0.00 0.00 6.46
2489 4374 2.179517 CGGTGAGTGAGAGACGCC 59.820 66.667 0.00 0.00 0.00 5.68
2490 4375 1.303799 TACCGGTGAGTGAGAGACGC 61.304 60.000 19.93 0.00 0.00 5.19
2491 4376 1.064208 CATACCGGTGAGTGAGAGACG 59.936 57.143 19.93 0.00 0.00 4.18
2492 4377 1.202313 GCATACCGGTGAGTGAGAGAC 60.202 57.143 19.93 0.00 0.00 3.36
2493 4378 1.103803 GCATACCGGTGAGTGAGAGA 58.896 55.000 19.93 0.00 0.00 3.10
2494 4379 0.103208 GGCATACCGGTGAGTGAGAG 59.897 60.000 19.93 0.00 0.00 3.20
2495 4380 2.199117 GGCATACCGGTGAGTGAGA 58.801 57.895 19.93 0.00 0.00 3.27
2496 4381 4.835927 GGCATACCGGTGAGTGAG 57.164 61.111 19.93 1.21 0.00 3.51
2512 4397 2.176546 CAAAGGCGATGCACACGG 59.823 61.111 15.09 0.00 0.00 4.94
2513 4398 1.154413 GTCAAAGGCGATGCACACG 60.154 57.895 10.19 10.19 0.00 4.49
2514 4399 0.385974 GTGTCAAAGGCGATGCACAC 60.386 55.000 0.00 10.93 0.00 3.82
2515 4400 1.514678 GGTGTCAAAGGCGATGCACA 61.515 55.000 15.61 7.54 31.12 4.57
2516 4401 1.210155 GGTGTCAAAGGCGATGCAC 59.790 57.895 0.00 9.68 0.00 4.57
2517 4402 0.608856 ATGGTGTCAAAGGCGATGCA 60.609 50.000 0.00 0.00 0.00 3.96
2518 4403 0.179156 CATGGTGTCAAAGGCGATGC 60.179 55.000 0.00 0.00 0.00 3.91
2519 4404 0.452987 CCATGGTGTCAAAGGCGATG 59.547 55.000 2.57 0.00 0.00 3.84
2520 4405 0.327924 TCCATGGTGTCAAAGGCGAT 59.672 50.000 12.58 0.00 0.00 4.58
2521 4406 0.605319 GTCCATGGTGTCAAAGGCGA 60.605 55.000 12.58 0.00 0.00 5.54
2522 4407 0.888736 TGTCCATGGTGTCAAAGGCG 60.889 55.000 12.58 0.00 0.00 5.52
2523 4408 1.474077 GATGTCCATGGTGTCAAAGGC 59.526 52.381 12.58 0.00 0.00 4.35
2524 4409 2.094675 GGATGTCCATGGTGTCAAAGG 58.905 52.381 12.58 0.00 35.64 3.11
2525 4410 1.739466 CGGATGTCCATGGTGTCAAAG 59.261 52.381 12.58 3.01 35.14 2.77
2526 4411 1.612991 CCGGATGTCCATGGTGTCAAA 60.613 52.381 12.58 0.00 35.14 2.69
2527 4412 0.035534 CCGGATGTCCATGGTGTCAA 60.036 55.000 12.58 0.00 35.14 3.18
2528 4413 1.601703 CCGGATGTCCATGGTGTCA 59.398 57.895 12.58 10.26 35.14 3.58
2529 4414 1.153168 CCCGGATGTCCATGGTGTC 60.153 63.158 12.58 8.31 35.14 3.67
2530 4415 2.998097 CCCGGATGTCCATGGTGT 59.002 61.111 12.58 0.00 35.14 4.16
2531 4416 1.695114 TAGCCCGGATGTCCATGGTG 61.695 60.000 12.58 0.00 35.14 4.17
2532 4417 1.383943 TAGCCCGGATGTCCATGGT 60.384 57.895 12.58 0.00 35.14 3.55
2533 4418 1.071471 GTAGCCCGGATGTCCATGG 59.929 63.158 4.97 4.97 35.14 3.66
2534 4419 0.469917 AAGTAGCCCGGATGTCCATG 59.530 55.000 0.73 0.00 35.14 3.66
2535 4420 1.971357 CTAAGTAGCCCGGATGTCCAT 59.029 52.381 0.73 0.00 35.14 3.41
2536 4421 1.063492 TCTAAGTAGCCCGGATGTCCA 60.063 52.381 0.73 0.00 35.14 4.02
2537 4422 1.614413 CTCTAAGTAGCCCGGATGTCC 59.386 57.143 0.73 0.00 0.00 4.02
2538 4423 1.000052 GCTCTAAGTAGCCCGGATGTC 60.000 57.143 0.73 0.00 36.45 3.06
2539 4424 1.041437 GCTCTAAGTAGCCCGGATGT 58.959 55.000 0.73 0.00 36.45 3.06
2540 4425 1.040646 TGCTCTAAGTAGCCCGGATG 58.959 55.000 0.73 0.00 42.05 3.51
2541 4426 1.896465 GATGCTCTAAGTAGCCCGGAT 59.104 52.381 0.73 0.00 42.05 4.18
2542 4427 1.133450 AGATGCTCTAAGTAGCCCGGA 60.133 52.381 0.73 0.00 42.05 5.14
2543 4428 1.271102 GAGATGCTCTAAGTAGCCCGG 59.729 57.143 0.00 0.00 42.05 5.73
2544 4429 2.235016 AGAGATGCTCTAAGTAGCCCG 58.765 52.381 0.00 0.00 39.28 6.13
2545 4430 3.192633 GCTAGAGATGCTCTAAGTAGCCC 59.807 52.174 5.75 0.00 41.74 5.19
2546 4431 3.823873 TGCTAGAGATGCTCTAAGTAGCC 59.176 47.826 12.05 0.04 41.74 3.93
2547 4432 4.759693 TCTGCTAGAGATGCTCTAAGTAGC 59.240 45.833 9.05 9.05 41.74 3.58
2548 4433 6.094048 GGATCTGCTAGAGATGCTCTAAGTAG 59.906 46.154 12.96 8.36 44.26 2.57
2549 4434 5.943416 GGATCTGCTAGAGATGCTCTAAGTA 59.057 44.000 12.96 0.65 44.26 2.24
2550 4435 4.766891 GGATCTGCTAGAGATGCTCTAAGT 59.233 45.833 12.96 0.00 44.26 2.24
2551 4436 4.158394 GGGATCTGCTAGAGATGCTCTAAG 59.842 50.000 16.99 2.25 46.30 2.18
2552 4437 4.085733 GGGATCTGCTAGAGATGCTCTAA 58.914 47.826 16.99 0.00 46.30 2.10
2553 4438 3.696045 GGGATCTGCTAGAGATGCTCTA 58.304 50.000 16.99 4.30 46.30 2.43
2554 4439 2.528564 GGGATCTGCTAGAGATGCTCT 58.471 52.381 16.99 2.22 46.30 4.09
2555 4440 1.202114 CGGGATCTGCTAGAGATGCTC 59.798 57.143 16.99 10.25 46.30 4.26
2556 4441 1.255882 CGGGATCTGCTAGAGATGCT 58.744 55.000 16.99 0.00 46.30 3.79
2557 4442 0.965439 ACGGGATCTGCTAGAGATGC 59.035 55.000 12.25 12.25 46.34 3.91
2558 4443 4.336993 GGTATACGGGATCTGCTAGAGATG 59.663 50.000 8.78 0.39 41.91 2.90
2559 4444 4.528920 GGTATACGGGATCTGCTAGAGAT 58.471 47.826 0.00 0.00 44.78 2.75
2560 4445 3.308259 GGGTATACGGGATCTGCTAGAGA 60.308 52.174 0.00 0.00 34.25 3.10
2561 4446 3.018149 GGGTATACGGGATCTGCTAGAG 58.982 54.545 0.00 0.00 0.00 2.43
2562 4447 2.648304 AGGGTATACGGGATCTGCTAGA 59.352 50.000 0.00 0.00 0.00 2.43
2563 4448 2.755655 CAGGGTATACGGGATCTGCTAG 59.244 54.545 0.00 0.00 0.00 3.42
2564 4449 2.109480 ACAGGGTATACGGGATCTGCTA 59.891 50.000 0.00 0.00 0.00 3.49
2565 4450 1.133136 ACAGGGTATACGGGATCTGCT 60.133 52.381 0.00 0.00 0.00 4.24
2566 4451 1.272769 GACAGGGTATACGGGATCTGC 59.727 57.143 0.00 0.00 0.00 4.26
2567 4452 1.893801 GGACAGGGTATACGGGATCTG 59.106 57.143 0.00 2.75 0.00 2.90
2568 4453 1.203149 GGGACAGGGTATACGGGATCT 60.203 57.143 0.00 0.00 0.00 2.75
2569 4454 1.264295 GGGACAGGGTATACGGGATC 58.736 60.000 0.00 0.00 0.00 3.36
2570 4455 0.541296 CGGGACAGGGTATACGGGAT 60.541 60.000 0.00 0.00 0.00 3.85
2571 4456 1.152694 CGGGACAGGGTATACGGGA 60.153 63.158 0.00 0.00 0.00 5.14
2572 4457 2.864471 GCGGGACAGGGTATACGGG 61.864 68.421 0.00 0.00 0.00 5.28
2573 4458 1.678598 TTGCGGGACAGGGTATACGG 61.679 60.000 0.00 0.00 0.00 4.02
2574 4459 0.176219 TTTGCGGGACAGGGTATACG 59.824 55.000 0.00 0.00 0.00 3.06
2575 4460 2.406596 TTTTGCGGGACAGGGTATAC 57.593 50.000 0.00 0.00 0.00 1.47
2576 4461 3.054287 TGATTTTTGCGGGACAGGGTATA 60.054 43.478 0.00 0.00 0.00 1.47
2577 4462 2.291282 TGATTTTTGCGGGACAGGGTAT 60.291 45.455 0.00 0.00 0.00 2.73
2578 4463 1.074084 TGATTTTTGCGGGACAGGGTA 59.926 47.619 0.00 0.00 0.00 3.69
2579 4464 0.178975 TGATTTTTGCGGGACAGGGT 60.179 50.000 0.00 0.00 0.00 4.34
2580 4465 0.527565 CTGATTTTTGCGGGACAGGG 59.472 55.000 0.00 0.00 0.00 4.45
2581 4466 1.247567 ACTGATTTTTGCGGGACAGG 58.752 50.000 0.00 0.00 0.00 4.00
2582 4467 3.369546 AAACTGATTTTTGCGGGACAG 57.630 42.857 0.00 0.00 0.00 3.51
2583 4468 4.920640 TTAAACTGATTTTTGCGGGACA 57.079 36.364 0.00 0.00 0.00 4.02
2584 4469 4.684242 CCTTTAAACTGATTTTTGCGGGAC 59.316 41.667 0.00 0.00 0.00 4.46
2585 4470 4.585162 TCCTTTAAACTGATTTTTGCGGGA 59.415 37.500 0.00 0.00 0.00 5.14
2586 4471 4.877282 TCCTTTAAACTGATTTTTGCGGG 58.123 39.130 0.00 0.00 0.00 6.13
2587 4472 6.530181 GGTATCCTTTAAACTGATTTTTGCGG 59.470 38.462 1.86 0.00 0.00 5.69
2588 4473 6.250527 CGGTATCCTTTAAACTGATTTTTGCG 59.749 38.462 1.86 0.00 0.00 4.85
2589 4474 6.034577 GCGGTATCCTTTAAACTGATTTTTGC 59.965 38.462 1.86 0.00 0.00 3.68
2590 4475 7.087639 TGCGGTATCCTTTAAACTGATTTTTG 58.912 34.615 1.86 0.00 0.00 2.44
2591 4476 7.222000 TGCGGTATCCTTTAAACTGATTTTT 57.778 32.000 1.86 0.00 0.00 1.94
2592 4477 6.827586 TGCGGTATCCTTTAAACTGATTTT 57.172 33.333 1.86 0.00 0.00 1.82
2593 4478 6.827586 TTGCGGTATCCTTTAAACTGATTT 57.172 33.333 1.86 0.00 0.00 2.17
2594 4479 6.827586 TTTGCGGTATCCTTTAAACTGATT 57.172 33.333 1.86 0.00 0.00 2.57
2595 4480 6.827586 TTTTGCGGTATCCTTTAAACTGAT 57.172 33.333 2.12 2.12 0.00 2.90
2596 4481 6.207810 ACATTTTGCGGTATCCTTTAAACTGA 59.792 34.615 0.00 0.00 0.00 3.41
2597 4482 6.386654 ACATTTTGCGGTATCCTTTAAACTG 58.613 36.000 0.00 0.00 0.00 3.16
2598 4483 6.584185 ACATTTTGCGGTATCCTTTAAACT 57.416 33.333 0.00 0.00 0.00 2.66
2599 4484 6.309494 GGAACATTTTGCGGTATCCTTTAAAC 59.691 38.462 0.00 0.00 0.00 2.01
2600 4485 6.209788 AGGAACATTTTGCGGTATCCTTTAAA 59.790 34.615 0.00 0.00 31.99 1.52
2601 4486 5.712917 AGGAACATTTTGCGGTATCCTTTAA 59.287 36.000 0.00 0.00 31.99 1.52
2602 4487 5.258051 AGGAACATTTTGCGGTATCCTTTA 58.742 37.500 0.00 0.00 31.99 1.85
2603 4488 4.086457 AGGAACATTTTGCGGTATCCTTT 58.914 39.130 0.00 0.00 31.99 3.11
2604 4489 3.697166 AGGAACATTTTGCGGTATCCTT 58.303 40.909 0.00 0.00 31.99 3.36
2605 4490 3.366052 AGGAACATTTTGCGGTATCCT 57.634 42.857 0.00 0.00 0.00 3.24
2606 4491 4.450082 AAAGGAACATTTTGCGGTATCC 57.550 40.909 0.00 0.00 0.00 2.59
2607 4492 6.034577 GCTAAAAAGGAACATTTTGCGGTATC 59.965 38.462 0.00 0.00 39.63 2.24
2608 4493 5.867174 GCTAAAAAGGAACATTTTGCGGTAT 59.133 36.000 0.00 0.00 39.63 2.73
2609 4494 5.221263 TGCTAAAAAGGAACATTTTGCGGTA 60.221 36.000 0.00 0.00 39.63 4.02
2610 4495 4.055360 GCTAAAAAGGAACATTTTGCGGT 58.945 39.130 0.00 0.00 39.63 5.68
2611 4496 4.054671 TGCTAAAAAGGAACATTTTGCGG 58.945 39.130 0.00 0.00 39.63 5.69
2612 4497 5.844301 ATGCTAAAAAGGAACATTTTGCG 57.156 34.783 0.00 0.00 39.63 4.85
2613 4498 8.854979 AAAAATGCTAAAAAGGAACATTTTGC 57.145 26.923 11.46 0.00 45.35 3.68
2616 4501 8.769891 CGGTAAAAATGCTAAAAAGGAACATTT 58.230 29.630 0.00 0.00 41.40 2.32
2617 4502 7.929245 ACGGTAAAAATGCTAAAAAGGAACATT 59.071 29.630 0.00 0.00 32.53 2.71
2618 4503 7.438564 ACGGTAAAAATGCTAAAAAGGAACAT 58.561 30.769 0.00 0.00 0.00 2.71
2619 4504 6.807789 ACGGTAAAAATGCTAAAAAGGAACA 58.192 32.000 0.00 0.00 0.00 3.18
2620 4505 8.856247 CATACGGTAAAAATGCTAAAAAGGAAC 58.144 33.333 0.00 0.00 0.00 3.62
2621 4506 8.794553 TCATACGGTAAAAATGCTAAAAAGGAA 58.205 29.630 0.00 0.00 0.00 3.36
2622 4507 8.238631 GTCATACGGTAAAAATGCTAAAAAGGA 58.761 33.333 0.00 0.00 0.00 3.36
2623 4508 8.241367 AGTCATACGGTAAAAATGCTAAAAAGG 58.759 33.333 0.00 0.00 0.00 3.11
2624 4509 9.620660 AAGTCATACGGTAAAAATGCTAAAAAG 57.379 29.630 0.00 0.00 0.00 2.27
2625 4510 9.968870 AAAGTCATACGGTAAAAATGCTAAAAA 57.031 25.926 0.00 0.00 0.00 1.94
2626 4511 9.968870 AAAAGTCATACGGTAAAAATGCTAAAA 57.031 25.926 0.00 0.00 0.00 1.52
2627 4512 9.400638 CAAAAGTCATACGGTAAAAATGCTAAA 57.599 29.630 0.00 0.00 0.00 1.85
2628 4513 8.569641 ACAAAAGTCATACGGTAAAAATGCTAA 58.430 29.630 0.00 0.00 0.00 3.09
2629 4514 8.101654 ACAAAAGTCATACGGTAAAAATGCTA 57.898 30.769 0.00 0.00 0.00 3.49
2630 4515 6.977213 ACAAAAGTCATACGGTAAAAATGCT 58.023 32.000 0.00 0.00 0.00 3.79
2631 4516 7.631915 AACAAAAGTCATACGGTAAAAATGC 57.368 32.000 0.00 0.00 0.00 3.56
2632 4517 8.414173 CGAAACAAAAGTCATACGGTAAAAATG 58.586 33.333 0.00 0.00 0.00 2.32
2633 4518 7.592164 CCGAAACAAAAGTCATACGGTAAAAAT 59.408 33.333 0.00 0.00 35.40 1.82
2634 4519 6.911511 CCGAAACAAAAGTCATACGGTAAAAA 59.088 34.615 0.00 0.00 35.40 1.94
2635 4520 6.428799 CCGAAACAAAAGTCATACGGTAAAA 58.571 36.000 0.00 0.00 35.40 1.52
2636 4521 5.560567 GCCGAAACAAAAGTCATACGGTAAA 60.561 40.000 0.00 0.00 40.95 2.01
2637 4522 4.083908 GCCGAAACAAAAGTCATACGGTAA 60.084 41.667 0.00 0.00 40.95 2.85
2638 4523 3.432933 GCCGAAACAAAAGTCATACGGTA 59.567 43.478 0.00 0.00 40.95 4.02
2639 4524 2.224784 GCCGAAACAAAAGTCATACGGT 59.775 45.455 0.00 0.00 40.95 4.83
2640 4525 2.224549 TGCCGAAACAAAAGTCATACGG 59.775 45.455 0.00 0.00 41.63 4.02
2641 4526 3.185594 TCTGCCGAAACAAAAGTCATACG 59.814 43.478 0.00 0.00 0.00 3.06
2642 4527 4.742438 TCTGCCGAAACAAAAGTCATAC 57.258 40.909 0.00 0.00 0.00 2.39
2643 4528 4.576873 TGTTCTGCCGAAACAAAAGTCATA 59.423 37.500 0.00 0.00 0.00 2.15
2644 4529 3.380004 TGTTCTGCCGAAACAAAAGTCAT 59.620 39.130 0.00 0.00 0.00 3.06
2645 4530 2.750166 TGTTCTGCCGAAACAAAAGTCA 59.250 40.909 0.00 0.00 0.00 3.41
2646 4531 3.064820 TCTGTTCTGCCGAAACAAAAGTC 59.935 43.478 0.00 0.00 0.00 3.01
2647 4532 3.013921 TCTGTTCTGCCGAAACAAAAGT 58.986 40.909 0.00 0.00 0.00 2.66
2648 4533 3.363178 GTCTGTTCTGCCGAAACAAAAG 58.637 45.455 0.00 0.00 0.00 2.27
2649 4534 2.098443 GGTCTGTTCTGCCGAAACAAAA 59.902 45.455 0.00 0.00 0.00 2.44
2650 4535 1.673920 GGTCTGTTCTGCCGAAACAAA 59.326 47.619 0.00 0.00 0.00 2.83
2651 4536 1.305201 GGTCTGTTCTGCCGAAACAA 58.695 50.000 0.00 0.00 0.00 2.83
2652 4537 0.534203 GGGTCTGTTCTGCCGAAACA 60.534 55.000 0.00 0.00 0.00 2.83
2653 4538 1.566018 CGGGTCTGTTCTGCCGAAAC 61.566 60.000 0.00 0.00 0.00 2.78
2654 4539 1.301401 CGGGTCTGTTCTGCCGAAA 60.301 57.895 0.00 0.00 0.00 3.46
2655 4540 1.180456 TACGGGTCTGTTCTGCCGAA 61.180 55.000 0.00 0.00 0.00 4.30
2656 4541 1.180456 TTACGGGTCTGTTCTGCCGA 61.180 55.000 0.00 0.00 0.00 5.54
2657 4542 0.320073 TTTACGGGTCTGTTCTGCCG 60.320 55.000 0.00 0.00 0.00 5.69
2658 4543 1.886886 TTTTACGGGTCTGTTCTGCC 58.113 50.000 0.00 0.00 0.00 4.85
2659 4544 5.813080 AATATTTTACGGGTCTGTTCTGC 57.187 39.130 0.00 0.00 0.00 4.26
2664 4549 8.680001 GGACAATAAAATATTTTACGGGTCTGT 58.320 33.333 26.90 20.21 35.65 3.41
2665 4550 8.132995 GGGACAATAAAATATTTTACGGGTCTG 58.867 37.037 26.90 18.44 35.65 3.51
2666 4551 7.012610 CGGGACAATAAAATATTTTACGGGTCT 59.987 37.037 26.90 12.50 35.65 3.85
2667 4552 7.134163 CGGGACAATAAAATATTTTACGGGTC 58.866 38.462 20.21 22.45 35.65 4.46
2668 4553 6.039605 CCGGGACAATAAAATATTTTACGGGT 59.960 38.462 24.13 19.97 35.65 5.28
2669 4554 6.039605 ACCGGGACAATAAAATATTTTACGGG 59.960 38.462 29.53 24.68 38.25 5.28
2670 4555 7.030075 ACCGGGACAATAAAATATTTTACGG 57.970 36.000 27.15 27.15 39.06 4.02
2676 4561 9.320352 GCAATTTTACCGGGACAATAAAATATT 57.680 29.630 15.97 4.56 37.15 1.28
2677 4562 8.478877 TGCAATTTTACCGGGACAATAAAATAT 58.521 29.630 15.97 7.57 37.15 1.28
2678 4563 7.760340 GTGCAATTTTACCGGGACAATAAAATA 59.240 33.333 15.97 3.42 37.15 1.40
2679 4564 6.592220 GTGCAATTTTACCGGGACAATAAAAT 59.408 34.615 6.32 9.98 38.68 1.82
2680 4565 5.927115 GTGCAATTTTACCGGGACAATAAAA 59.073 36.000 6.32 7.91 33.69 1.52
2681 4566 5.010719 TGTGCAATTTTACCGGGACAATAAA 59.989 36.000 6.32 0.00 0.00 1.40
2682 4567 4.523173 TGTGCAATTTTACCGGGACAATAA 59.477 37.500 6.32 0.00 0.00 1.40
2683 4568 4.079970 TGTGCAATTTTACCGGGACAATA 58.920 39.130 6.32 0.00 0.00 1.90
2684 4569 2.894126 TGTGCAATTTTACCGGGACAAT 59.106 40.909 6.32 0.00 0.00 2.71
2685 4570 2.307768 TGTGCAATTTTACCGGGACAA 58.692 42.857 6.32 0.00 0.00 3.18
2686 4571 1.982660 TGTGCAATTTTACCGGGACA 58.017 45.000 6.32 0.00 0.00 4.02
2687 4572 3.054166 GTTTGTGCAATTTTACCGGGAC 58.946 45.455 6.32 0.00 0.00 4.46
2688 4573 2.036089 GGTTTGTGCAATTTTACCGGGA 59.964 45.455 6.32 0.00 0.00 5.14
2689 4574 2.409012 GGTTTGTGCAATTTTACCGGG 58.591 47.619 6.32 0.00 0.00 5.73
2690 4575 2.055100 CGGTTTGTGCAATTTTACCGG 58.945 47.619 14.56 0.00 43.42 5.28
2692 4577 1.795872 GGCGGTTTGTGCAATTTTACC 59.204 47.619 0.00 0.00 0.00 2.85
2693 4578 1.795872 GGGCGGTTTGTGCAATTTTAC 59.204 47.619 0.00 0.00 0.00 2.01
2694 4579 1.689273 AGGGCGGTTTGTGCAATTTTA 59.311 42.857 0.00 0.00 0.00 1.52
2695 4580 0.467804 AGGGCGGTTTGTGCAATTTT 59.532 45.000 0.00 0.00 0.00 1.82
2696 4581 1.333177 TAGGGCGGTTTGTGCAATTT 58.667 45.000 0.00 0.00 0.00 1.82
2697 4582 1.333177 TTAGGGCGGTTTGTGCAATT 58.667 45.000 0.00 0.00 0.00 2.32
2698 4583 1.333177 TTTAGGGCGGTTTGTGCAAT 58.667 45.000 0.00 0.00 0.00 3.56
2699 4584 1.112113 TTTTAGGGCGGTTTGTGCAA 58.888 45.000 0.00 0.00 0.00 4.08
2700 4585 1.112113 TTTTTAGGGCGGTTTGTGCA 58.888 45.000 0.00 0.00 0.00 4.57
2701 4586 1.493772 GTTTTTAGGGCGGTTTGTGC 58.506 50.000 0.00 0.00 0.00 4.57
2702 4587 1.065851 ACGTTTTTAGGGCGGTTTGTG 59.934 47.619 0.00 0.00 0.00 3.33
2703 4588 1.391577 ACGTTTTTAGGGCGGTTTGT 58.608 45.000 0.00 0.00 0.00 2.83
2704 4589 2.387185 GAACGTTTTTAGGGCGGTTTG 58.613 47.619 0.46 0.00 0.00 2.93
2705 4590 1.002576 CGAACGTTTTTAGGGCGGTTT 60.003 47.619 0.46 0.00 0.00 3.27
2706 4591 0.587768 CGAACGTTTTTAGGGCGGTT 59.412 50.000 0.46 0.00 0.00 4.44
2707 4592 0.532640 ACGAACGTTTTTAGGGCGGT 60.533 50.000 0.46 0.00 0.00 5.68
2708 4593 0.164432 GACGAACGTTTTTAGGGCGG 59.836 55.000 0.46 0.00 0.00 6.13
2709 4594 1.125566 GAGACGAACGTTTTTAGGGCG 59.874 52.381 0.46 1.55 0.00 6.13
2710 4595 1.125566 CGAGACGAACGTTTTTAGGGC 59.874 52.381 0.46 0.00 0.00 5.19
2711 4596 2.406357 GTCGAGACGAACGTTTTTAGGG 59.594 50.000 0.46 0.00 37.72 3.53
2712 4597 2.406357 GGTCGAGACGAACGTTTTTAGG 59.594 50.000 0.46 0.00 37.72 2.69
2713 4598 3.678049 GGTCGAGACGAACGTTTTTAG 57.322 47.619 0.46 0.00 37.72 1.85
2721 4606 2.202453 GGAGCGGTCGAGACGAAC 60.202 66.667 13.03 0.00 40.50 3.95
2722 4607 3.437795 GGGAGCGGTCGAGACGAA 61.438 66.667 13.03 0.00 37.72 3.85
2723 4608 3.989838 ATGGGAGCGGTCGAGACGA 62.990 63.158 13.03 0.00 0.00 4.20
2724 4609 3.471244 GATGGGAGCGGTCGAGACG 62.471 68.421 8.77 5.17 0.00 4.18
2725 4610 2.413765 GATGGGAGCGGTCGAGAC 59.586 66.667 8.77 0.00 0.00 3.36
2726 4611 3.209812 CGATGGGAGCGGTCGAGA 61.210 66.667 8.77 0.00 37.55 4.04
2727 4612 4.933064 GCGATGGGAGCGGTCGAG 62.933 72.222 8.77 0.00 37.55 4.04
2734 4619 0.320247 AAGATCATCGCGATGGGAGC 60.320 55.000 40.00 28.10 39.24 4.70
2735 4620 1.269988 ACAAGATCATCGCGATGGGAG 60.270 52.381 40.00 28.21 39.24 4.30
2736 4621 0.752658 ACAAGATCATCGCGATGGGA 59.247 50.000 40.00 27.02 39.24 4.37
2737 4622 1.143305 GACAAGATCATCGCGATGGG 58.857 55.000 40.00 27.44 39.24 4.00
2738 4623 1.791204 CTGACAAGATCATCGCGATGG 59.209 52.381 40.00 28.38 39.24 3.51
2739 4624 1.791204 CCTGACAAGATCATCGCGATG 59.209 52.381 37.19 37.19 36.48 3.84
2740 4625 1.269988 CCCTGACAAGATCATCGCGAT 60.270 52.381 17.62 17.62 36.48 4.58
2741 4626 0.103026 CCCTGACAAGATCATCGCGA 59.897 55.000 13.09 13.09 36.48 5.87
2742 4627 0.103026 TCCCTGACAAGATCATCGCG 59.897 55.000 0.00 0.00 36.48 5.87
2743 4628 1.134699 TGTCCCTGACAAGATCATCGC 60.135 52.381 0.00 0.00 39.78 4.58
2744 4629 2.967599 TGTCCCTGACAAGATCATCG 57.032 50.000 0.00 0.00 39.78 3.84
2753 4638 1.352083 CTCCTCCTTTGTCCCTGACA 58.648 55.000 0.00 0.00 41.09 3.58
2754 4639 0.035915 GCTCCTCCTTTGTCCCTGAC 60.036 60.000 0.00 0.00 0.00 3.51
2755 4640 1.544825 CGCTCCTCCTTTGTCCCTGA 61.545 60.000 0.00 0.00 0.00 3.86
2756 4641 1.078848 CGCTCCTCCTTTGTCCCTG 60.079 63.158 0.00 0.00 0.00 4.45
2757 4642 1.536662 ACGCTCCTCCTTTGTCCCT 60.537 57.895 0.00 0.00 0.00 4.20
2758 4643 1.376037 CACGCTCCTCCTTTGTCCC 60.376 63.158 0.00 0.00 0.00 4.46
2759 4644 2.035442 GCACGCTCCTCCTTTGTCC 61.035 63.158 0.00 0.00 0.00 4.02
2760 4645 2.383527 CGCACGCTCCTCCTTTGTC 61.384 63.158 0.00 0.00 0.00 3.18
2761 4646 2.357517 CGCACGCTCCTCCTTTGT 60.358 61.111 0.00 0.00 0.00 2.83
2762 4647 2.357517 ACGCACGCTCCTCCTTTG 60.358 61.111 0.00 0.00 0.00 2.77
2763 4648 2.048127 GACGCACGCTCCTCCTTT 60.048 61.111 0.00 0.00 0.00 3.11
2764 4649 2.574955 AAGACGCACGCTCCTCCTT 61.575 57.895 0.00 0.00 0.00 3.36
2765 4650 2.992114 AAGACGCACGCTCCTCCT 60.992 61.111 0.00 0.00 0.00 3.69
2766 4651 2.811317 CAAGACGCACGCTCCTCC 60.811 66.667 0.00 0.00 0.00 4.30
2767 4652 3.482783 GCAAGACGCACGCTCCTC 61.483 66.667 0.00 0.00 41.79 3.71
2774 4659 3.712881 GTCACCGGCAAGACGCAC 61.713 66.667 0.00 0.00 45.17 5.34
2775 4660 3.741830 TTGTCACCGGCAAGACGCA 62.742 57.895 0.00 0.00 45.17 5.24
2776 4661 2.970324 TTGTCACCGGCAAGACGC 60.970 61.111 0.00 0.00 37.58 5.19
2777 4662 2.935955 GTTGTCACCGGCAAGACG 59.064 61.111 0.00 0.00 37.58 4.18
2778 4663 2.935955 CGTTGTCACCGGCAAGAC 59.064 61.111 13.61 13.61 35.37 3.01
2779 4664 2.970324 GCGTTGTCACCGGCAAGA 60.970 61.111 0.00 0.00 0.00 3.02
2780 4665 2.972505 AGCGTTGTCACCGGCAAG 60.973 61.111 0.00 0.00 0.00 4.01
2781 4666 3.276091 CAGCGTTGTCACCGGCAA 61.276 61.111 0.00 0.00 0.00 4.52
2785 4670 3.049674 ATGGCAGCGTTGTCACCG 61.050 61.111 9.26 0.00 42.67 4.94
2786 4671 2.562912 CATGGCAGCGTTGTCACC 59.437 61.111 9.26 0.00 42.67 4.02
2787 4672 1.915614 CTCCATGGCAGCGTTGTCAC 61.916 60.000 9.26 0.00 42.67 3.67
2788 4673 1.672030 CTCCATGGCAGCGTTGTCA 60.672 57.895 9.54 9.54 44.26 3.58
2789 4674 3.044059 GCTCCATGGCAGCGTTGTC 62.044 63.158 16.94 0.00 0.00 3.18
2790 4675 3.058160 GCTCCATGGCAGCGTTGT 61.058 61.111 16.94 0.00 0.00 3.32
2791 4676 2.537792 CTTGCTCCATGGCAGCGTTG 62.538 60.000 22.87 14.98 43.39 4.10
2792 4677 2.282391 TTGCTCCATGGCAGCGTT 60.282 55.556 22.87 0.00 43.39 4.84
2793 4678 2.749044 CTTGCTCCATGGCAGCGT 60.749 61.111 22.87 0.00 43.39 5.07
2794 4679 2.437180 TCTTGCTCCATGGCAGCG 60.437 61.111 22.87 14.20 43.39 5.18
2795 4680 1.654954 CTGTCTTGCTCCATGGCAGC 61.655 60.000 22.16 22.16 43.39 5.25
2796 4681 0.035725 TCTGTCTTGCTCCATGGCAG 60.036 55.000 6.96 6.91 43.39 4.85
2797 4682 0.035725 CTCTGTCTTGCTCCATGGCA 60.036 55.000 6.96 0.00 40.74 4.92
2798 4683 0.747283 CCTCTGTCTTGCTCCATGGC 60.747 60.000 6.96 0.00 0.00 4.40
2799 4684 0.907486 TCCTCTGTCTTGCTCCATGG 59.093 55.000 4.97 4.97 0.00 3.66
2800 4685 1.406614 GGTCCTCTGTCTTGCTCCATG 60.407 57.143 0.00 0.00 0.00 3.66
2801 4686 0.908198 GGTCCTCTGTCTTGCTCCAT 59.092 55.000 0.00 0.00 0.00 3.41
2802 4687 0.471780 TGGTCCTCTGTCTTGCTCCA 60.472 55.000 0.00 0.00 0.00 3.86
2803 4688 0.036858 GTGGTCCTCTGTCTTGCTCC 60.037 60.000 0.00 0.00 0.00 4.70
2804 4689 0.389166 CGTGGTCCTCTGTCTTGCTC 60.389 60.000 0.00 0.00 0.00 4.26
2805 4690 1.668294 CGTGGTCCTCTGTCTTGCT 59.332 57.895 0.00 0.00 0.00 3.91
2806 4691 1.374758 CCGTGGTCCTCTGTCTTGC 60.375 63.158 0.00 0.00 0.00 4.01
2807 4692 1.293498 CCCGTGGTCCTCTGTCTTG 59.707 63.158 0.00 0.00 0.00 3.02
2808 4693 1.913762 CCCCGTGGTCCTCTGTCTT 60.914 63.158 0.00 0.00 0.00 3.01
2809 4694 2.169590 ATCCCCGTGGTCCTCTGTCT 62.170 60.000 0.00 0.00 0.00 3.41
2810 4695 1.686110 ATCCCCGTGGTCCTCTGTC 60.686 63.158 0.00 0.00 0.00 3.51
2811 4696 1.990060 CATCCCCGTGGTCCTCTGT 60.990 63.158 0.00 0.00 0.00 3.41
2812 4697 2.735772 CCATCCCCGTGGTCCTCTG 61.736 68.421 0.00 0.00 34.46 3.35
2813 4698 2.257541 ATCCATCCCCGTGGTCCTCT 62.258 60.000 0.00 0.00 40.27 3.69
2814 4699 1.766461 ATCCATCCCCGTGGTCCTC 60.766 63.158 0.00 0.00 40.27 3.71
2815 4700 2.072487 CATCCATCCCCGTGGTCCT 61.072 63.158 0.00 0.00 40.27 3.85
2816 4701 2.510906 CATCCATCCCCGTGGTCC 59.489 66.667 0.00 0.00 40.27 4.46
2817 4702 1.052124 TACCATCCATCCCCGTGGTC 61.052 60.000 0.00 0.00 43.53 4.02
2818 4703 1.003704 TACCATCCATCCCCGTGGT 59.996 57.895 1.23 1.23 46.16 4.16
2819 4704 1.754745 CTACCATCCATCCCCGTGG 59.245 63.158 0.00 0.00 40.76 4.94
2820 4705 1.071471 GCTACCATCCATCCCCGTG 59.929 63.158 0.00 0.00 0.00 4.94
2821 4706 0.190069 TAGCTACCATCCATCCCCGT 59.810 55.000 0.00 0.00 0.00 5.28
2822 4707 0.898320 CTAGCTACCATCCATCCCCG 59.102 60.000 0.00 0.00 0.00 5.73
2823 4708 0.615850 GCTAGCTACCATCCATCCCC 59.384 60.000 7.70 0.00 0.00 4.81
2824 4709 1.650528 AGCTAGCTACCATCCATCCC 58.349 55.000 17.69 0.00 0.00 3.85
2825 4710 2.167487 GCTAGCTAGCTACCATCCATCC 59.833 54.545 33.71 4.59 45.62 3.51
2826 4711 3.518634 GCTAGCTAGCTACCATCCATC 57.481 52.381 33.71 4.79 45.62 3.51
2838 4723 2.333225 CACCCGCGAGCTAGCTAG 59.667 66.667 19.38 19.42 34.40 3.42
2839 4724 3.217017 CCACCCGCGAGCTAGCTA 61.217 66.667 19.38 0.00 34.40 3.32
2890 4775 4.796495 AAATCTCACCCCCGCCGC 62.796 66.667 0.00 0.00 0.00 6.53
2891 4776 2.824041 CAAATCTCACCCCCGCCG 60.824 66.667 0.00 0.00 0.00 6.46
2892 4777 2.440247 CCAAATCTCACCCCCGCC 60.440 66.667 0.00 0.00 0.00 6.13
2893 4778 3.140814 GCCAAATCTCACCCCCGC 61.141 66.667 0.00 0.00 0.00 6.13
2894 4779 2.440247 GGCCAAATCTCACCCCCG 60.440 66.667 0.00 0.00 0.00 5.73
2895 4780 2.440247 CGGCCAAATCTCACCCCC 60.440 66.667 2.24 0.00 0.00 5.40
2896 4781 2.440247 CCGGCCAAATCTCACCCC 60.440 66.667 2.24 0.00 0.00 4.95
2897 4782 0.395724 ATTCCGGCCAAATCTCACCC 60.396 55.000 2.24 0.00 0.00 4.61
2898 4783 1.025041 GATTCCGGCCAAATCTCACC 58.975 55.000 16.89 0.00 31.73 4.02
2899 4784 1.750193 TGATTCCGGCCAAATCTCAC 58.250 50.000 22.03 4.18 34.80 3.51
2900 4785 2.368439 CTTGATTCCGGCCAAATCTCA 58.632 47.619 22.03 12.02 34.80 3.27
2901 4786 1.066152 GCTTGATTCCGGCCAAATCTC 59.934 52.381 22.03 11.71 34.80 2.75
2902 4787 1.106285 GCTTGATTCCGGCCAAATCT 58.894 50.000 22.03 0.00 34.80 2.40
2903 4788 1.066152 GAGCTTGATTCCGGCCAAATC 59.934 52.381 17.19 17.19 34.40 2.17
2904 4789 1.106285 GAGCTTGATTCCGGCCAAAT 58.894 50.000 2.24 0.94 0.00 2.32
2905 4790 1.305219 CGAGCTTGATTCCGGCCAAA 61.305 55.000 2.24 0.00 0.00 3.28
2906 4791 1.745115 CGAGCTTGATTCCGGCCAA 60.745 57.895 2.24 0.00 0.00 4.52
2907 4792 2.125147 CGAGCTTGATTCCGGCCA 60.125 61.111 2.24 0.00 0.00 5.36
2908 4793 2.897350 CCGAGCTTGATTCCGGCC 60.897 66.667 1.22 0.00 35.29 6.13
2909 4794 2.869503 TTCCCGAGCTTGATTCCGGC 62.870 60.000 1.22 0.00 40.56 6.13
2910 4795 0.811616 CTTCCCGAGCTTGATTCCGG 60.812 60.000 1.22 1.91 41.47 5.14
2911 4796 0.108138 ACTTCCCGAGCTTGATTCCG 60.108 55.000 1.22 0.00 0.00 4.30
2912 4797 1.066143 TGACTTCCCGAGCTTGATTCC 60.066 52.381 1.22 0.00 0.00 3.01
2913 4798 2.386661 TGACTTCCCGAGCTTGATTC 57.613 50.000 1.22 0.00 0.00 2.52
2914 4799 2.636830 CATGACTTCCCGAGCTTGATT 58.363 47.619 1.22 0.00 0.00 2.57
2915 4800 1.134280 CCATGACTTCCCGAGCTTGAT 60.134 52.381 1.22 0.00 0.00 2.57
2916 4801 0.250234 CCATGACTTCCCGAGCTTGA 59.750 55.000 1.22 0.00 0.00 3.02
2917 4802 0.036010 ACCATGACTTCCCGAGCTTG 60.036 55.000 0.00 0.00 0.00 4.01
2918 4803 0.036010 CACCATGACTTCCCGAGCTT 60.036 55.000 0.00 0.00 0.00 3.74
2919 4804 1.194781 ACACCATGACTTCCCGAGCT 61.195 55.000 0.00 0.00 0.00 4.09
2920 4805 0.741221 GACACCATGACTTCCCGAGC 60.741 60.000 0.00 0.00 0.00 5.03
2921 4806 0.458543 CGACACCATGACTTCCCGAG 60.459 60.000 0.00 0.00 0.00 4.63
2922 4807 1.589630 CGACACCATGACTTCCCGA 59.410 57.895 0.00 0.00 0.00 5.14
2923 4808 1.447838 CCGACACCATGACTTCCCG 60.448 63.158 0.00 0.00 0.00 5.14
2924 4809 1.745489 GCCGACACCATGACTTCCC 60.745 63.158 0.00 0.00 0.00 3.97
2925 4810 1.021390 CAGCCGACACCATGACTTCC 61.021 60.000 0.00 0.00 0.00 3.46
2926 4811 1.639298 GCAGCCGACACCATGACTTC 61.639 60.000 0.00 0.00 0.00 3.01
2927 4812 1.672356 GCAGCCGACACCATGACTT 60.672 57.895 0.00 0.00 0.00 3.01
2928 4813 2.046892 GCAGCCGACACCATGACT 60.047 61.111 0.00 0.00 0.00 3.41
2929 4814 3.490759 CGCAGCCGACACCATGAC 61.491 66.667 0.00 0.00 36.29 3.06
2930 4815 3.647649 CTCGCAGCCGACACCATGA 62.648 63.158 0.00 0.00 38.82 3.07
2931 4816 3.190849 CTCGCAGCCGACACCATG 61.191 66.667 0.00 0.00 38.82 3.66
2932 4817 4.457496 CCTCGCAGCCGACACCAT 62.457 66.667 0.00 0.00 38.82 3.55
2934 4819 3.876589 TTTCCTCGCAGCCGACACC 62.877 63.158 0.00 0.00 38.82 4.16
2935 4820 2.357034 TTTCCTCGCAGCCGACAC 60.357 61.111 0.00 0.00 38.82 3.67
2936 4821 2.048222 CTTTCCTCGCAGCCGACA 60.048 61.111 0.00 0.00 38.82 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.