Multiple sequence alignment - TraesCS2D01G482500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G482500 chr2D 100.000 6840 0 0 1 6840 584805704 584798865 0.000000e+00 12632.0
1 TraesCS2D01G482500 chr2D 81.512 1574 214 47 4315 5834 5439144 5440694 0.000000e+00 1223.0
2 TraesCS2D01G482500 chr2D 82.571 700 97 16 3261 3942 5438093 5438785 1.640000e-165 593.0
3 TraesCS2D01G482500 chr2D 93.789 161 8 2 6201 6360 71262033 71262192 2.470000e-59 241.0
4 TraesCS2D01G482500 chr2D 84.663 163 23 2 176 336 560154049 560153887 1.970000e-35 161.0
5 TraesCS2D01G482500 chr2D 83.735 166 24 3 174 337 296364046 296364210 3.300000e-33 154.0
6 TraesCS2D01G482500 chr2B 93.191 3657 172 38 688 4313 705048411 705044801 0.000000e+00 5302.0
7 TraesCS2D01G482500 chr2B 96.160 1901 67 6 4311 6207 705044756 705042858 0.000000e+00 3101.0
8 TraesCS2D01G482500 chr2B 81.559 1578 213 44 4315 5834 5805318 5806875 0.000000e+00 1230.0
9 TraesCS2D01G482500 chr2B 87.220 313 39 1 1 313 705049258 705048947 8.440000e-94 355.0
10 TraesCS2D01G482500 chr2B 91.597 238 14 5 5971 6207 702215410 702215178 2.380000e-84 324.0
11 TraesCS2D01G482500 chr2B 96.571 175 6 0 6360 6534 702215126 702214952 2.410000e-74 291.0
12 TraesCS2D01G482500 chr2B 84.568 162 21 4 180 339 590855783 590855624 2.550000e-34 158.0
13 TraesCS2D01G482500 chr2B 91.045 67 6 0 456 522 705217635 705217569 2.630000e-14 91.6
14 TraesCS2D01G482500 chr2B 92.453 53 0 3 6678 6727 88847949 88848000 9.520000e-09 73.1
15 TraesCS2D01G482500 chr2A 96.045 2301 77 9 2024 4313 718939700 718937403 0.000000e+00 3733.0
16 TraesCS2D01G482500 chr2A 96.523 1898 65 1 4311 6207 718937358 718935461 0.000000e+00 3138.0
17 TraesCS2D01G482500 chr2A 90.025 1213 51 29 863 2038 718941016 718939837 0.000000e+00 1506.0
18 TraesCS2D01G482500 chr2A 82.194 702 96 14 3261 3942 4086685 4087377 1.650000e-160 577.0
19 TraesCS2D01G482500 chr2A 83.820 377 43 8 137 502 718941698 718941329 6.570000e-90 342.0
20 TraesCS2D01G482500 chr2A 93.789 161 8 2 6201 6360 460904169 460904010 2.470000e-59 241.0
21 TraesCS2D01G482500 chr2A 84.049 163 24 2 177 337 135473228 135473390 9.190000e-34 156.0
22 TraesCS2D01G482500 chr2A 96.296 81 3 0 6360 6440 718935409 718935329 4.300000e-27 134.0
23 TraesCS2D01G482500 chr2A 89.535 86 5 2 678 761 718941091 718941008 9.380000e-19 106.0
24 TraesCS2D01G482500 chr2A 90.000 70 6 1 6765 6834 718935107 718935039 9.450000e-14 89.8
25 TraesCS2D01G482500 chr2A 91.525 59 4 1 6528 6585 718935326 718935268 5.690000e-11 80.5
26 TraesCS2D01G482500 chr2A 90.698 43 2 2 791 832 324604414 324604373 1.000000e-03 56.5
27 TraesCS2D01G482500 chr6D 99.573 468 2 0 948 1415 420971066 420970599 0.000000e+00 854.0
28 TraesCS2D01G482500 chr7D 94.515 237 11 2 5971 6207 322286937 322286703 1.400000e-96 364.0
29 TraesCS2D01G482500 chr7D 97.714 175 4 0 6360 6534 322286651 322286477 1.110000e-77 302.0
30 TraesCS2D01G482500 chr7D 93.023 43 3 0 587 629 176583860 176583902 5.730000e-06 63.9
31 TraesCS2D01G482500 chrUn 82.759 406 64 4 2736 3141 320413478 320413877 2.350000e-94 357.0
32 TraesCS2D01G482500 chrUn 82.759 406 64 4 2736 3141 346259552 346259951 2.350000e-94 357.0
33 TraesCS2D01G482500 chrUn 82.396 409 66 4 2742 3150 364656230 364655828 1.090000e-92 351.0
34 TraesCS2D01G482500 chrUn 78.776 523 98 9 2742 3257 327883039 327882523 8.500000e-89 339.0
35 TraesCS2D01G482500 chrUn 82.206 399 63 6 2717 3115 443893183 443893573 3.060000e-88 337.0
36 TraesCS2D01G482500 chrUn 78.585 523 99 8 2742 3257 327874090 327873574 3.950000e-87 333.0
37 TraesCS2D01G482500 chrUn 94.872 156 6 2 6206 6360 47449492 47449646 6.850000e-60 243.0
38 TraesCS2D01G482500 chr3B 94.397 232 12 1 5976 6207 597010009 597009779 8.440000e-94 355.0
39 TraesCS2D01G482500 chr3B 95.429 175 8 0 6360 6534 597009727 597009553 5.220000e-71 279.0
40 TraesCS2D01G482500 chr5D 95.283 212 9 1 5976 6187 430257749 430257539 1.100000e-87 335.0
41 TraesCS2D01G482500 chr5D 94.886 176 8 1 6360 6534 430257403 430257228 2.430000e-69 274.0
42 TraesCS2D01G482500 chr5D 88.000 75 9 0 550 624 61377811 61377737 9.450000e-14 89.8
43 TraesCS2D01G482500 chr1D 97.714 175 3 1 6360 6534 419919645 419919472 4.010000e-77 300.0
44 TraesCS2D01G482500 chr1D 91.045 201 15 3 6007 6207 419919894 419919697 1.130000e-67 268.0
45 TraesCS2D01G482500 chr1D 95.745 47 0 1 6677 6721 434392975 434393021 2.650000e-09 75.0
46 TraesCS2D01G482500 chr4D 95.000 180 8 1 5976 6155 4601608 4601786 1.450000e-71 281.0
47 TraesCS2D01G482500 chr4D 94.937 158 7 1 6203 6360 58643920 58643764 5.300000e-61 246.0
48 TraesCS2D01G482500 chr3D 94.969 159 6 2 6203 6360 238999411 238999568 1.470000e-61 248.0
49 TraesCS2D01G482500 chr3D 94.872 156 6 2 6206 6360 410670063 410670217 6.850000e-60 243.0
50 TraesCS2D01G482500 chr3D 89.286 56 4 1 6677 6730 569126440 569126385 1.230000e-07 69.4
51 TraesCS2D01G482500 chr5B 94.375 160 5 4 6203 6360 507193372 507193215 6.850000e-60 243.0
52 TraesCS2D01G482500 chr4B 93.333 165 9 2 6197 6360 672939893 672940056 6.850000e-60 243.0
53 TraesCS2D01G482500 chr3A 91.716 169 11 3 6193 6360 659527403 659527237 1.480000e-56 231.0
54 TraesCS2D01G482500 chr3A 84.810 79 11 1 346 424 555923389 555923466 2.050000e-10 78.7
55 TraesCS2D01G482500 chr7A 86.538 156 19 2 170 324 509220460 509220614 3.280000e-38 171.0
56 TraesCS2D01G482500 chr7A 82.857 175 28 2 167 339 494786819 494786993 9.190000e-34 156.0
57 TraesCS2D01G482500 chr7A 80.645 93 17 1 337 429 190891762 190891671 3.420000e-08 71.3
58 TraesCS2D01G482500 chr6B 84.663 163 21 4 176 336 547722488 547722648 7.100000e-35 159.0
59 TraesCS2D01G482500 chr5A 86.301 73 10 0 557 629 696931504 696931432 5.690000e-11 80.5
60 TraesCS2D01G482500 chr4A 95.833 48 0 1 6678 6723 693282114 693282161 7.360000e-10 76.8
61 TraesCS2D01G482500 chr4A 94.000 50 1 1 6677 6724 656815613 656815564 2.650000e-09 75.0
62 TraesCS2D01G482500 chr4A 100.000 28 0 0 791 818 683428224 683428197 1.200000e-02 52.8
63 TraesCS2D01G482500 chr1B 92.593 54 0 3 6676 6726 344841128 344841076 2.650000e-09 75.0
64 TraesCS2D01G482500 chr7B 88.889 63 2 4 6678 6737 107564759 107564819 9.520000e-09 73.1
65 TraesCS2D01G482500 chr1A 91.228 57 0 3 6670 6723 548772333 548772387 9.520000e-09 73.1
66 TraesCS2D01G482500 chr6A 93.878 49 0 2 6677 6722 540320395 540320347 3.420000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G482500 chr2D 584798865 584805704 6839 True 12632.000000 12632 100.000000 1 6840 1 chr2D.!!$R2 6839
1 TraesCS2D01G482500 chr2D 5438093 5440694 2601 False 908.000000 1223 82.041500 3261 5834 2 chr2D.!!$F3 2573
2 TraesCS2D01G482500 chr2B 705042858 705049258 6400 True 2919.333333 5302 92.190333 1 6207 3 chr2B.!!$R4 6206
3 TraesCS2D01G482500 chr2B 5805318 5806875 1557 False 1230.000000 1230 81.559000 4315 5834 1 chr2B.!!$F1 1519
4 TraesCS2D01G482500 chr2A 718935039 718941698 6659 True 1141.162500 3733 91.721125 137 6834 8 chr2A.!!$R3 6697
5 TraesCS2D01G482500 chr2A 4086685 4087377 692 False 577.000000 577 82.194000 3261 3942 1 chr2A.!!$F1 681
6 TraesCS2D01G482500 chrUn 327882523 327883039 516 True 339.000000 339 78.776000 2742 3257 1 chrUn.!!$R2 515
7 TraesCS2D01G482500 chrUn 327873574 327874090 516 True 333.000000 333 78.585000 2742 3257 1 chrUn.!!$R1 515
8 TraesCS2D01G482500 chr5D 430257228 430257749 521 True 304.500000 335 95.084500 5976 6534 2 chr5D.!!$R2 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.098200 TCGTAGCAATCAGACGACCG 59.902 55.000 0.00 0.00 40.45 4.79 F
838 1103 0.685097 ACCTAATGAGCACGTGTGGT 59.315 50.000 18.38 4.09 44.89 4.16 F
854 1119 0.687920 TGGTGGAATCACGCACCTTA 59.312 50.000 0.00 0.00 44.50 2.69 F
2173 2655 0.319211 ACGTTACGCAGCTGCACTAA 60.319 50.000 36.03 26.03 42.21 2.24 F
2726 3208 0.385390 CCCACCAAGTGTGTCAAAGC 59.615 55.000 0.00 0.00 43.85 3.51 F
2991 3473 0.389817 TCGGTCAAGGCATCTGAACG 60.390 55.000 13.46 13.46 43.28 3.95 F
4288 4802 0.389948 GCTAGAACACCACCACCTCG 60.390 60.000 0.00 0.00 0.00 4.63 F
4439 5022 1.153066 TGCCTTCTTGTTGCACGGA 60.153 52.632 0.00 0.00 0.00 4.69 F
5527 6157 0.819259 GTGCCAAGGTGAGTTGAGCA 60.819 55.000 0.00 0.00 33.76 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1290 1576 0.183731 GGGGATCCGCCAGAAATTCT 59.816 55.000 17.92 0.0 38.95 2.40 R
1639 1970 0.753262 ATGTACTTAGCAGGGGAGCG 59.247 55.000 0.00 0.0 40.15 5.03 R
2694 3176 1.000896 GGTGGGCTGCAACCTACAT 60.001 57.895 22.30 0.0 42.69 2.29 R
3867 4373 0.458669 GTTGAGGATGCATTGCCAGG 59.541 55.000 6.12 0.0 0.00 4.45 R
4439 5022 0.316204 GTGCTGGTGCTGCTGAATTT 59.684 50.000 0.00 0.0 40.48 1.82 R
4578 5164 0.400213 ATGGGCTTTTCAGTCACCGA 59.600 50.000 0.00 0.0 0.00 4.69 R
5368 5992 0.391661 ACTGCAGGATGTGGCGTAAG 60.392 55.000 19.93 0.0 39.31 2.34 R
5620 6260 1.043116 TACCGAGGCTGAGATGGTGG 61.043 60.000 0.00 0.0 34.18 4.61 R
6747 7454 0.034756 CCATCACGTGTTCAGACCCA 59.965 55.000 16.51 0.0 0.00 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.203938 ACCGGCAAGGAGGAAGGA 60.204 61.111 0.00 0.00 45.00 3.36
33 34 1.168714 AGGATGCCTTTTTCACGAGC 58.831 50.000 0.00 0.00 0.00 5.03
35 36 0.517316 GATGCCTTTTTCACGAGCGT 59.483 50.000 0.00 0.00 0.00 5.07
43 44 0.882927 TTTCACGAGCGTGGGGAAAG 60.883 55.000 21.14 0.00 45.43 2.62
80 81 0.098200 TCGTAGCAATCAGACGACCG 59.902 55.000 0.00 0.00 40.45 4.79
128 129 1.867233 CTAGCGCGCCTTCATTACATT 59.133 47.619 30.33 6.92 0.00 2.71
134 135 2.845967 GCGCCTTCATTACATTGTTTCG 59.154 45.455 0.00 0.00 0.00 3.46
143 144 1.154488 CATTGTTTCGTGCGTCGGG 60.154 57.895 0.00 0.00 40.32 5.14
178 179 2.868583 GCACACTTCGCATGACATCTAT 59.131 45.455 0.00 0.00 0.00 1.98
186 187 2.037641 CGCATGACATCTATTCCCTCCA 59.962 50.000 0.00 0.00 0.00 3.86
259 267 6.096673 TGCATATAGACGGATTTTAGAGCA 57.903 37.500 0.00 0.00 0.00 4.26
270 278 4.035675 GGATTTTAGAGCAAGATTCACCCG 59.964 45.833 0.00 0.00 0.00 5.28
271 279 2.691409 TTAGAGCAAGATTCACCCGG 57.309 50.000 0.00 0.00 0.00 5.73
276 284 0.958822 GCAAGATTCACCCGGTTTGT 59.041 50.000 0.00 0.00 0.00 2.83
290 298 3.841643 CGGTTTGTTCCGTATGTAGTCT 58.158 45.455 0.00 0.00 44.77 3.24
368 378 8.170730 AGTCAATATAAAAAGACCCAAAGGAGT 58.829 33.333 0.00 0.00 36.73 3.85
378 388 4.470304 AGACCCAAAGGAGTAGATACAACC 59.530 45.833 0.00 0.00 36.73 3.77
381 391 4.941873 CCCAAAGGAGTAGATACAACCAAC 59.058 45.833 8.28 0.00 33.47 3.77
409 419 4.402155 GCCATCAAACCATGTCTATCCAAA 59.598 41.667 0.00 0.00 0.00 3.28
410 420 5.679638 GCCATCAAACCATGTCTATCCAAAC 60.680 44.000 0.00 0.00 0.00 2.93
412 422 6.071447 CCATCAAACCATGTCTATCCAAACAA 60.071 38.462 0.00 0.00 0.00 2.83
414 424 7.156876 TCAAACCATGTCTATCCAAACAATC 57.843 36.000 0.00 0.00 0.00 2.67
415 425 5.818136 AACCATGTCTATCCAAACAATCG 57.182 39.130 0.00 0.00 0.00 3.34
433 443 3.548745 TCGAGATTGCTCCAATGATGT 57.451 42.857 0.00 0.00 37.91 3.06
434 444 4.670896 TCGAGATTGCTCCAATGATGTA 57.329 40.909 0.00 0.00 37.91 2.29
455 465 7.940178 TGTACTCAACATGTTTAGTGTGTAG 57.060 36.000 27.86 7.83 31.43 2.74
457 467 6.169557 ACTCAACATGTTTAGTGTGTAGGA 57.830 37.500 21.64 6.25 0.00 2.94
458 468 6.223852 ACTCAACATGTTTAGTGTGTAGGAG 58.776 40.000 21.64 16.12 35.38 3.69
459 469 6.169557 TCAACATGTTTAGTGTGTAGGAGT 57.830 37.500 8.77 0.00 0.00 3.85
460 470 7.014905 ACTCAACATGTTTAGTGTGTAGGAGTA 59.985 37.037 21.64 0.00 38.11 2.59
463 473 8.999431 CAACATGTTTAGTGTGTAGGAGTAATT 58.001 33.333 8.77 0.00 0.00 1.40
601 691 6.068461 TGTACTACATAAGGGGCAAAATGA 57.932 37.500 0.00 0.00 0.00 2.57
604 694 1.750778 ACATAAGGGGCAAAATGAGCG 59.249 47.619 0.00 0.00 0.00 5.03
605 695 2.023673 CATAAGGGGCAAAATGAGCGA 58.976 47.619 0.00 0.00 0.00 4.93
610 700 4.098914 AGGGGCAAAATGAGCGAATATA 57.901 40.909 0.00 0.00 0.00 0.86
613 703 5.648092 AGGGGCAAAATGAGCGAATATATAC 59.352 40.000 0.00 0.00 0.00 1.47
614 704 5.648092 GGGGCAAAATGAGCGAATATATACT 59.352 40.000 0.00 0.00 0.00 2.12
616 706 6.595716 GGGCAAAATGAGCGAATATATACTCT 59.404 38.462 10.16 0.00 0.00 3.24
617 707 7.764443 GGGCAAAATGAGCGAATATATACTCTA 59.236 37.037 10.16 1.22 0.00 2.43
662 923 5.902051 AAAACAAAGAGAGTACTACGTGC 57.098 39.130 0.00 0.00 0.00 5.34
663 924 4.579454 AACAAAGAGAGTACTACGTGCA 57.421 40.909 0.00 0.00 0.00 4.57
664 925 4.579454 ACAAAGAGAGTACTACGTGCAA 57.421 40.909 0.00 0.00 0.00 4.08
665 926 5.135508 ACAAAGAGAGTACTACGTGCAAT 57.864 39.130 0.00 0.00 0.00 3.56
666 927 5.539048 ACAAAGAGAGTACTACGTGCAATT 58.461 37.500 0.00 0.00 0.00 2.32
667 928 6.684686 ACAAAGAGAGTACTACGTGCAATTA 58.315 36.000 0.00 0.00 0.00 1.40
668 929 7.149973 ACAAAGAGAGTACTACGTGCAATTAA 58.850 34.615 0.00 0.00 0.00 1.40
669 930 7.817962 ACAAAGAGAGTACTACGTGCAATTAAT 59.182 33.333 0.00 0.00 0.00 1.40
670 931 9.297586 CAAAGAGAGTACTACGTGCAATTAATA 57.702 33.333 0.00 0.00 0.00 0.98
673 934 9.680315 AGAGAGTACTACGTGCAATTAATATTC 57.320 33.333 0.00 0.00 0.00 1.75
674 935 9.680315 GAGAGTACTACGTGCAATTAATATTCT 57.320 33.333 0.00 0.00 0.00 2.40
718 981 9.900710 ATTACACGCAAACATTTATTAGTGAAA 57.099 25.926 0.00 0.00 33.18 2.69
722 987 9.128107 CACGCAAACATTTATTAGTGAAAAGAT 57.872 29.630 0.00 0.00 0.00 2.40
766 1031 3.731652 TGGTCCAAAGTGAAATTGCAG 57.268 42.857 0.00 0.00 0.00 4.41
771 1036 6.183360 TGGTCCAAAGTGAAATTGCAGTTATT 60.183 34.615 6.94 0.00 31.49 1.40
800 1065 9.896645 TGAGAATTGAGATATAGACAAGCTTTT 57.103 29.630 0.00 0.00 0.00 2.27
803 1068 9.643652 GAATTGAGATATAGACAAGCTTTTTCG 57.356 33.333 0.00 0.00 0.00 3.46
804 1069 8.948631 ATTGAGATATAGACAAGCTTTTTCGA 57.051 30.769 0.00 0.00 0.00 3.71
805 1070 8.771920 TTGAGATATAGACAAGCTTTTTCGAA 57.228 30.769 0.00 0.00 0.00 3.71
806 1071 8.948631 TGAGATATAGACAAGCTTTTTCGAAT 57.051 30.769 0.00 0.00 0.00 3.34
807 1072 8.820933 TGAGATATAGACAAGCTTTTTCGAATG 58.179 33.333 0.00 0.00 0.00 2.67
808 1073 8.147642 AGATATAGACAAGCTTTTTCGAATGG 57.852 34.615 0.00 0.00 0.00 3.16
809 1074 7.987458 AGATATAGACAAGCTTTTTCGAATGGA 59.013 33.333 0.00 0.00 0.00 3.41
810 1075 4.756084 AGACAAGCTTTTTCGAATGGAG 57.244 40.909 0.00 0.00 0.00 3.86
811 1076 3.503748 AGACAAGCTTTTTCGAATGGAGG 59.496 43.478 0.00 0.00 0.00 4.30
812 1077 2.558359 ACAAGCTTTTTCGAATGGAGGG 59.442 45.455 0.00 0.00 0.00 4.30
813 1078 2.819608 CAAGCTTTTTCGAATGGAGGGA 59.180 45.455 0.00 0.00 0.00 4.20
814 1079 2.716217 AGCTTTTTCGAATGGAGGGAG 58.284 47.619 0.00 0.00 0.00 4.30
822 1087 1.831736 CGAATGGAGGGAGTACAACCT 59.168 52.381 7.98 7.98 40.54 3.50
827 1092 4.069312 TGGAGGGAGTACAACCTAATGA 57.931 45.455 8.20 0.00 37.18 2.57
828 1093 4.030913 TGGAGGGAGTACAACCTAATGAG 58.969 47.826 8.20 0.00 37.18 2.90
838 1103 0.685097 ACCTAATGAGCACGTGTGGT 59.315 50.000 18.38 4.09 44.89 4.16
851 1116 1.599518 TGTGGTGGAATCACGCACC 60.600 57.895 0.00 0.00 44.50 5.01
853 1118 0.889186 GTGGTGGAATCACGCACCTT 60.889 55.000 0.00 0.00 44.50 3.50
854 1119 0.687920 TGGTGGAATCACGCACCTTA 59.312 50.000 0.00 0.00 44.50 2.69
855 1120 1.280710 TGGTGGAATCACGCACCTTAT 59.719 47.619 0.00 0.00 44.50 1.73
856 1121 2.502130 TGGTGGAATCACGCACCTTATA 59.498 45.455 0.00 0.00 44.50 0.98
857 1122 2.870411 GGTGGAATCACGCACCTTATAC 59.130 50.000 0.00 0.00 44.50 1.47
861 1126 3.942748 GGAATCACGCACCTTATACCAAA 59.057 43.478 0.00 0.00 0.00 3.28
862 1127 4.396790 GGAATCACGCACCTTATACCAAAA 59.603 41.667 0.00 0.00 0.00 2.44
887 1160 8.587952 AAATTGAAAAACTTCGGAAAATCGAT 57.412 26.923 0.00 0.00 39.03 3.59
898 1171 4.461081 TCGGAAAATCGATTCACCCAAAAT 59.539 37.500 11.83 0.00 33.92 1.82
911 1184 9.830294 GATTCACCCAAAATTTGAAATTCATTC 57.170 29.630 7.37 0.00 38.60 2.67
912 1185 8.743085 TTCACCCAAAATTTGAAATTCATTCA 57.257 26.923 7.37 0.00 46.22 2.57
975 1248 1.267186 CGCGAGGCACGGTATAAAAAC 60.267 52.381 0.00 0.00 42.83 2.43
988 1261 1.293267 TAAAAACCCGGCTCGCTTCG 61.293 55.000 0.00 0.00 0.00 3.79
1196 1482 1.670406 CTGTGAGCAGCCACCACTC 60.670 63.158 10.46 0.00 35.77 3.51
1201 1487 4.416738 GCAGCCACCACTCCTCCC 62.417 72.222 0.00 0.00 0.00 4.30
1202 1488 2.608988 CAGCCACCACTCCTCCCT 60.609 66.667 0.00 0.00 0.00 4.20
1204 1490 2.607750 GCCACCACTCCTCCCTCA 60.608 66.667 0.00 0.00 0.00 3.86
1205 1491 2.664081 GCCACCACTCCTCCCTCAG 61.664 68.421 0.00 0.00 0.00 3.35
1290 1576 1.906824 GTCGATCGCCTGGGGGATA 60.907 63.158 17.21 2.69 45.73 2.59
1301 1587 2.489802 CCTGGGGGATAGAATTTCTGGC 60.490 54.545 9.22 1.06 33.58 4.85
1308 1594 2.930826 TAGAATTTCTGGCGGATCCC 57.069 50.000 6.06 0.00 0.00 3.85
1351 1639 3.347216 AGTTGGGTCGAATGGAATTGAG 58.653 45.455 0.00 0.00 36.07 3.02
1408 1705 1.000771 GGGGGTTCAAGCCTTCCTC 60.001 63.158 5.40 0.00 35.71 3.71
1438 1761 1.300080 TTTTTCGCTGCTTGCTGCC 60.300 52.632 16.56 2.45 42.00 4.85
1461 1784 4.403453 GCCGCGATGCTATTTAATTTAGG 58.597 43.478 8.23 0.00 0.00 2.69
1474 1797 3.382083 AATTTAGGCAGGTCGGGAATT 57.618 42.857 0.00 0.00 0.00 2.17
1580 1910 1.901085 GGAGGCAGTAGGGTGTCTG 59.099 63.158 0.00 0.00 30.58 3.51
1633 1964 5.564651 TGGTCTTTTAGCAATGCTGTTTAGC 60.565 40.000 19.25 9.43 40.10 3.09
1653 1984 1.153349 GGTTCGCTCCCCTGCTAAG 60.153 63.158 0.00 0.00 0.00 2.18
1669 2000 6.377146 CCCTGCTAAGTACATTGTTAATGGTT 59.623 38.462 0.00 0.62 43.21 3.67
1700 2033 0.529773 GTGCCTCAACTGTCGACACA 60.530 55.000 15.76 6.40 0.00 3.72
1701 2034 0.529773 TGCCTCAACTGTCGACACAC 60.530 55.000 15.76 0.00 0.00 3.82
1702 2035 1.222115 GCCTCAACTGTCGACACACC 61.222 60.000 15.76 0.00 0.00 4.16
1703 2036 0.389391 CCTCAACTGTCGACACACCT 59.611 55.000 15.76 0.00 0.00 4.00
1722 2055 4.019174 ACCTTTTTCATATGCACCTGAGG 58.981 43.478 0.00 0.00 0.00 3.86
1770 2103 3.654414 ACTGTTCTCGGATGAGTTTGTC 58.346 45.455 0.00 0.00 43.09 3.18
1804 2137 1.080638 ATTGTGGGGCTAGGTTCCAA 58.919 50.000 0.00 0.00 31.73 3.53
2027 2509 3.514309 AGTAAGGTGTGTTTATCCGCTCT 59.486 43.478 0.00 0.00 0.00 4.09
2050 2532 1.517242 CTTCCTTGCACCAGTCAGTC 58.483 55.000 0.00 0.00 0.00 3.51
2063 2545 2.095364 CAGTCAGTCAGCATTTTCCTGC 60.095 50.000 0.00 0.00 42.62 4.85
2105 2587 7.324616 GGCAATCTAGAATTTTTCATATCGTGC 59.675 37.037 0.00 0.00 0.00 5.34
2107 2589 9.378597 CAATCTAGAATTTTTCATATCGTGCAG 57.621 33.333 0.00 0.00 0.00 4.41
2173 2655 0.319211 ACGTTACGCAGCTGCACTAA 60.319 50.000 36.03 26.03 42.21 2.24
2175 2657 1.393539 CGTTACGCAGCTGCACTAATT 59.606 47.619 36.03 15.76 42.21 1.40
2176 2658 2.774007 GTTACGCAGCTGCACTAATTG 58.226 47.619 36.03 20.96 42.21 2.32
2365 2847 1.201921 CGTAGTCAATTGCGACTTGCC 60.202 52.381 5.23 0.00 43.84 4.52
2369 2851 1.987770 GTCAATTGCGACTTGCCAATG 59.012 47.619 0.00 0.00 45.60 2.82
2491 2973 1.074775 CCTAGTGCCCAACCAGCAA 59.925 57.895 0.00 0.00 43.02 3.91
2511 2993 2.279935 ATGGTTTACCCTCGCAACAA 57.720 45.000 0.00 0.00 34.29 2.83
2556 3038 2.359850 GCACCCTGGCGTCATGAA 60.360 61.111 0.00 0.00 0.00 2.57
2592 3074 3.129638 CGTCCAAAGTTTCAACCCAAAGA 59.870 43.478 0.00 0.00 0.00 2.52
2694 3176 3.071023 AGGCAAGCACAGACTACAAACTA 59.929 43.478 0.00 0.00 0.00 2.24
2726 3208 0.385390 CCCACCAAGTGTGTCAAAGC 59.615 55.000 0.00 0.00 43.85 3.51
2790 3272 4.320935 CCAAAATGGTAGTTCCGTTGGAAG 60.321 45.833 9.01 0.00 43.90 3.46
2967 3449 9.871238 GGATACTAGAAAGACAAATCTGTTACA 57.129 33.333 0.00 0.00 35.30 2.41
2972 3454 9.429359 CTAGAAAGACAAATCTGTTACAGTCAT 57.571 33.333 12.41 0.00 35.30 3.06
2991 3473 0.389817 TCGGTCAAGGCATCTGAACG 60.390 55.000 13.46 13.46 43.28 3.95
3096 3578 6.072452 GGTACTGACTGCTGCTTTCTTTAATT 60.072 38.462 0.00 0.00 0.00 1.40
3832 4338 6.471146 AGATGAATACAGGATATCAGTTGCC 58.529 40.000 4.83 0.00 0.00 4.52
3867 4373 6.540189 TGAGCAGCCTCAAGTAATTAATCTTC 59.460 38.462 0.00 0.00 44.79 2.87
3886 4392 0.458669 CCTGGCAATGCATCCTCAAC 59.541 55.000 7.79 0.00 0.00 3.18
3966 4472 5.558818 AGATCAACTCTTCTGTTTGATGCT 58.441 37.500 0.91 0.00 0.00 3.79
4288 4802 0.389948 GCTAGAACACCACCACCTCG 60.390 60.000 0.00 0.00 0.00 4.63
4439 5022 1.153066 TGCCTTCTTGTTGCACGGA 60.153 52.632 0.00 0.00 0.00 4.69
4915 5508 1.404181 GCACACTCTGAATCGCTACCA 60.404 52.381 0.00 0.00 0.00 3.25
5020 5613 1.333435 CCGAAAACACAGGTAACACGC 60.333 52.381 0.00 0.00 41.41 5.34
5155 5757 5.510179 CCTTGAACATTTCTTGGCAGAATGT 60.510 40.000 15.65 15.65 38.89 2.71
5368 5992 1.024271 TTCAGACACTTTGCTGCACC 58.976 50.000 0.00 0.00 32.27 5.01
5384 6008 1.078426 ACCTTACGCCACATCCTGC 60.078 57.895 0.00 0.00 0.00 4.85
5527 6157 0.819259 GTGCCAAGGTGAGTTGAGCA 60.819 55.000 0.00 0.00 33.76 4.26
5756 6396 1.752694 ACAGTTTGCACACCGGCTT 60.753 52.632 0.00 0.00 34.04 4.35
5866 6506 2.447047 GGGGATCATAACCATCTTGGGT 59.553 50.000 0.00 0.00 43.37 4.51
5950 6590 4.773149 TGTAAAGTGTTGTTTTGGAAGGGT 59.227 37.500 0.00 0.00 0.00 4.34
5974 6614 0.317160 TGTAGAGTGGTGAACGCCAG 59.683 55.000 7.37 0.00 39.53 4.85
6034 6674 7.953158 TTGTAGACTCTGAAATGAGAAACAG 57.047 36.000 0.00 0.00 37.50 3.16
6039 6679 8.600449 AGACTCTGAAATGAGAAACAGTAAAG 57.400 34.615 0.00 0.00 37.50 1.85
6207 6913 9.834628 GACAAGTAGTGAGAGCTTGATATATAC 57.165 37.037 10.01 0.00 41.31 1.47
6208 6914 9.581289 ACAAGTAGTGAGAGCTTGATATATACT 57.419 33.333 10.01 0.00 41.31 2.12
6210 6916 8.801882 AGTAGTGAGAGCTTGATATATACTCC 57.198 38.462 0.00 0.00 0.00 3.85
6211 6917 7.832187 AGTAGTGAGAGCTTGATATATACTCCC 59.168 40.741 0.00 0.00 0.00 4.30
6212 6918 6.799827 AGTGAGAGCTTGATATATACTCCCT 58.200 40.000 0.00 0.00 0.00 4.20
6213 6919 6.889722 AGTGAGAGCTTGATATATACTCCCTC 59.110 42.308 0.00 0.00 0.00 4.30
6214 6920 6.096282 GTGAGAGCTTGATATATACTCCCTCC 59.904 46.154 0.00 0.00 0.00 4.30
6216 6922 4.936802 AGCTTGATATATACTCCCTCCGT 58.063 43.478 0.00 0.00 0.00 4.69
6217 6923 5.334421 AGCTTGATATATACTCCCTCCGTT 58.666 41.667 0.00 0.00 0.00 4.44
6219 6925 5.394333 GCTTGATATATACTCCCTCCGTTCC 60.394 48.000 0.00 0.00 0.00 3.62
6221 6927 6.647461 TGATATATACTCCCTCCGTTCCTA 57.353 41.667 0.00 0.00 0.00 2.94
6222 6928 7.036154 TGATATATACTCCCTCCGTTCCTAA 57.964 40.000 0.00 0.00 0.00 2.69
6223 6929 7.472741 TGATATATACTCCCTCCGTTCCTAAA 58.527 38.462 0.00 0.00 0.00 1.85
6224 6930 8.120538 TGATATATACTCCCTCCGTTCCTAAAT 58.879 37.037 0.00 0.00 0.00 1.40
6225 6931 9.638176 GATATATACTCCCTCCGTTCCTAAATA 57.362 37.037 0.00 0.00 0.00 1.40
6229 6935 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
6230 6936 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
6232 6938 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
6234 6940 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
6235 6941 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
6236 6942 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
6262 6968 8.873215 AGAGATTTCACTATAAACCACATACG 57.127 34.615 0.00 0.00 0.00 3.06
6263 6969 7.926555 AGAGATTTCACTATAAACCACATACGG 59.073 37.037 0.00 0.00 0.00 4.02
6264 6970 7.788026 AGATTTCACTATAAACCACATACGGA 58.212 34.615 0.00 0.00 0.00 4.69
6265 6971 8.429641 AGATTTCACTATAAACCACATACGGAT 58.570 33.333 0.00 0.00 0.00 4.18
6266 6972 7.780008 TTTCACTATAAACCACATACGGATG 57.220 36.000 5.94 5.94 39.16 3.51
6268 6974 7.585579 TCACTATAAACCACATACGGATGTA 57.414 36.000 14.23 0.00 44.82 2.29
6269 6975 8.185506 TCACTATAAACCACATACGGATGTAT 57.814 34.615 14.23 5.54 44.82 2.29
6270 6976 9.299465 TCACTATAAACCACATACGGATGTATA 57.701 33.333 14.23 6.48 44.82 1.47
6277 6983 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
6278 6984 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
6279 6985 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
6280 6986 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
6281 6987 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
6286 6992 8.972127 ACGGATGTATATAGATGCATTTAGAGT 58.028 33.333 11.19 0.00 38.38 3.24
6287 6993 9.242477 CGGATGTATATAGATGCATTTAGAGTG 57.758 37.037 11.19 0.00 38.38 3.51
6296 7002 9.703892 ATAGATGCATTTAGAGTGTAGATTCAC 57.296 33.333 0.00 0.00 38.46 3.18
6307 7013 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
6308 7014 6.471146 AGTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 44.07 4.09
6309 7015 6.370994 AGTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 44.07 3.35
6310 7016 6.148480 GTGTAGATTCACTCATTTTGCTCTGT 59.852 38.462 0.00 0.00 35.68 3.41
6311 7017 7.331934 GTGTAGATTCACTCATTTTGCTCTGTA 59.668 37.037 0.00 0.00 35.68 2.74
6312 7018 8.043113 TGTAGATTCACTCATTTTGCTCTGTAT 58.957 33.333 0.00 0.00 0.00 2.29
6313 7019 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
6314 7020 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
6315 7021 5.868043 TCACTCATTTTGCTCTGTATGTG 57.132 39.130 0.00 0.00 0.00 3.21
6316 7022 4.696877 TCACTCATTTTGCTCTGTATGTGG 59.303 41.667 0.00 0.00 0.00 4.17
6317 7023 4.456911 CACTCATTTTGCTCTGTATGTGGT 59.543 41.667 0.00 0.00 0.00 4.16
6318 7024 4.697352 ACTCATTTTGCTCTGTATGTGGTC 59.303 41.667 0.00 0.00 0.00 4.02
6319 7025 4.009675 TCATTTTGCTCTGTATGTGGTCC 58.990 43.478 0.00 0.00 0.00 4.46
6320 7026 3.500448 TTTTGCTCTGTATGTGGTCCA 57.500 42.857 0.00 0.00 0.00 4.02
6321 7027 3.719268 TTTGCTCTGTATGTGGTCCAT 57.281 42.857 0.00 0.00 37.58 3.41
6322 7028 4.835284 TTTGCTCTGTATGTGGTCCATA 57.165 40.909 0.00 0.00 34.86 2.74
6323 7029 4.835284 TTGCTCTGTATGTGGTCCATAA 57.165 40.909 0.00 0.00 37.77 1.90
6324 7030 5.372343 TTGCTCTGTATGTGGTCCATAAT 57.628 39.130 0.00 0.00 37.77 1.28
6325 7031 6.493189 TTGCTCTGTATGTGGTCCATAATA 57.507 37.500 0.00 0.00 37.77 0.98
6326 7032 6.101650 TGCTCTGTATGTGGTCCATAATAG 57.898 41.667 0.00 0.00 37.77 1.73
6327 7033 5.838521 TGCTCTGTATGTGGTCCATAATAGA 59.161 40.000 0.00 0.00 37.77 1.98
6328 7034 6.326323 TGCTCTGTATGTGGTCCATAATAGAA 59.674 38.462 0.00 0.00 37.77 2.10
6329 7035 7.016563 TGCTCTGTATGTGGTCCATAATAGAAT 59.983 37.037 0.00 0.00 37.77 2.40
6330 7036 7.547370 GCTCTGTATGTGGTCCATAATAGAATC 59.453 40.741 0.00 0.00 37.77 2.52
6331 7037 8.727100 TCTGTATGTGGTCCATAATAGAATCT 57.273 34.615 0.00 0.00 37.77 2.40
6332 7038 8.807118 TCTGTATGTGGTCCATAATAGAATCTC 58.193 37.037 0.00 0.00 37.77 2.75
6333 7039 7.907389 TGTATGTGGTCCATAATAGAATCTCC 58.093 38.462 0.00 0.00 37.77 3.71
6334 7040 7.734865 TGTATGTGGTCCATAATAGAATCTCCT 59.265 37.037 0.00 0.00 37.77 3.69
6335 7041 7.639062 ATGTGGTCCATAATAGAATCTCCTT 57.361 36.000 0.00 0.00 29.82 3.36
6336 7042 7.067496 TGTGGTCCATAATAGAATCTCCTTC 57.933 40.000 0.00 0.00 0.00 3.46
6337 7043 6.615316 TGTGGTCCATAATAGAATCTCCTTCA 59.385 38.462 0.00 0.00 36.24 3.02
6338 7044 7.127186 TGTGGTCCATAATAGAATCTCCTTCAA 59.873 37.037 0.00 0.00 36.24 2.69
6339 7045 7.993183 GTGGTCCATAATAGAATCTCCTTCAAA 59.007 37.037 0.00 0.00 36.24 2.69
6340 7046 8.213679 TGGTCCATAATAGAATCTCCTTCAAAG 58.786 37.037 0.00 0.00 36.24 2.77
6341 7047 8.432805 GGTCCATAATAGAATCTCCTTCAAAGA 58.567 37.037 0.00 0.00 36.24 2.52
6342 7048 9.267084 GTCCATAATAGAATCTCCTTCAAAGAC 57.733 37.037 0.00 0.00 36.24 3.01
6343 7049 9.218525 TCCATAATAGAATCTCCTTCAAAGACT 57.781 33.333 0.00 0.00 36.24 3.24
6344 7050 9.844257 CCATAATAGAATCTCCTTCAAAGACTT 57.156 33.333 0.00 0.00 36.24 3.01
6357 7063 9.595823 TCCTTCAAAGACTTATATTTAGGAACG 57.404 33.333 0.00 0.00 26.20 3.95
6358 7064 8.827677 CCTTCAAAGACTTATATTTAGGAACGG 58.172 37.037 0.00 0.00 0.00 4.44
6507 7213 7.923414 AACAATTAGTTAGTTAGAAGGCCTG 57.077 36.000 5.69 0.00 39.09 4.85
6510 7216 7.390718 ACAATTAGTTAGTTAGAAGGCCTGTTG 59.609 37.037 5.69 0.00 0.00 3.33
6517 7223 0.035458 AGAAGGCCTGTTGGAACTCG 59.965 55.000 5.69 0.00 34.57 4.18
6534 7241 3.323243 ACTCGAAAAACGACACCCTATG 58.677 45.455 0.00 0.00 46.45 2.23
6535 7242 2.671396 CTCGAAAAACGACACCCTATGG 59.329 50.000 0.00 0.00 46.45 2.74
6564 7271 4.517285 TGTGAAGTGAAGCTTTCAGAAGT 58.483 39.130 0.00 0.00 41.01 3.01
6569 7276 6.992123 TGAAGTGAAGCTTTCAGAAGTTGATA 59.008 34.615 0.00 0.00 41.01 2.15
6579 7286 7.063544 GCTTTCAGAAGTTGATACGTAGTTGAT 59.936 37.037 0.08 0.00 37.27 2.57
6580 7287 7.812309 TTCAGAAGTTGATACGTAGTTGATG 57.188 36.000 0.08 0.00 45.11 3.07
6581 7288 6.330278 TCAGAAGTTGATACGTAGTTGATGG 58.670 40.000 0.08 0.00 37.78 3.51
6582 7289 6.071560 TCAGAAGTTGATACGTAGTTGATGGT 60.072 38.462 0.08 0.00 37.78 3.55
6583 7290 6.590292 CAGAAGTTGATACGTAGTTGATGGTT 59.410 38.462 0.08 0.00 37.78 3.67
6584 7291 6.590292 AGAAGTTGATACGTAGTTGATGGTTG 59.410 38.462 0.08 0.00 37.78 3.77
6585 7292 5.175859 AGTTGATACGTAGTTGATGGTTGG 58.824 41.667 0.08 0.00 37.78 3.77
6586 7293 4.811969 TGATACGTAGTTGATGGTTGGT 57.188 40.909 0.08 0.00 37.78 3.67
6587 7294 5.155278 TGATACGTAGTTGATGGTTGGTT 57.845 39.130 0.08 0.00 37.78 3.67
6588 7295 5.172934 TGATACGTAGTTGATGGTTGGTTC 58.827 41.667 0.08 0.00 37.78 3.62
6589 7296 2.774687 ACGTAGTTGATGGTTGGTTCC 58.225 47.619 0.00 0.00 37.78 3.62
6590 7297 2.081462 CGTAGTTGATGGTTGGTTCCC 58.919 52.381 0.00 0.00 0.00 3.97
6591 7298 2.551287 CGTAGTTGATGGTTGGTTCCCA 60.551 50.000 0.00 0.00 36.16 4.37
6592 7299 1.995376 AGTTGATGGTTGGTTCCCAC 58.005 50.000 0.00 0.00 34.07 4.61
6593 7300 1.216678 AGTTGATGGTTGGTTCCCACA 59.783 47.619 0.00 0.00 34.07 4.17
6594 7301 2.158325 AGTTGATGGTTGGTTCCCACAT 60.158 45.455 0.00 0.00 34.07 3.21
6595 7302 3.075283 AGTTGATGGTTGGTTCCCACATA 59.925 43.478 0.00 0.00 34.07 2.29
6596 7303 4.023291 GTTGATGGTTGGTTCCCACATAT 58.977 43.478 0.00 0.00 34.07 1.78
6597 7304 5.044476 AGTTGATGGTTGGTTCCCACATATA 60.044 40.000 0.00 0.00 34.07 0.86
6598 7305 4.787551 TGATGGTTGGTTCCCACATATAC 58.212 43.478 0.00 0.00 34.07 1.47
6599 7306 3.269538 TGGTTGGTTCCCACATATACG 57.730 47.619 0.00 0.00 30.78 3.06
6600 7307 2.092861 TGGTTGGTTCCCACATATACGG 60.093 50.000 0.00 0.00 30.78 4.02
6601 7308 2.567985 GTTGGTTCCCACATATACGGG 58.432 52.381 2.66 2.66 44.60 5.28
6602 7309 1.133363 TGGTTCCCACATATACGGGG 58.867 55.000 8.44 4.36 43.29 5.73
6603 7310 0.250597 GGTTCCCACATATACGGGGC 60.251 60.000 8.44 3.27 43.29 5.80
6604 7311 0.470766 GTTCCCACATATACGGGGCA 59.529 55.000 8.44 0.00 43.29 5.36
6605 7312 1.073284 GTTCCCACATATACGGGGCAT 59.927 52.381 8.44 0.00 43.29 4.40
6606 7313 1.440618 TCCCACATATACGGGGCATT 58.559 50.000 8.44 0.00 43.29 3.56
6607 7314 1.349688 TCCCACATATACGGGGCATTC 59.650 52.381 8.44 0.00 43.29 2.67
6608 7315 1.351017 CCCACATATACGGGGCATTCT 59.649 52.381 1.24 0.00 38.95 2.40
6609 7316 2.426522 CCACATATACGGGGCATTCTG 58.573 52.381 0.00 0.00 0.00 3.02
6610 7317 2.038426 CCACATATACGGGGCATTCTGA 59.962 50.000 0.00 0.00 0.00 3.27
6611 7318 3.067106 CACATATACGGGGCATTCTGAC 58.933 50.000 0.00 0.00 0.00 3.51
6612 7319 2.972713 ACATATACGGGGCATTCTGACT 59.027 45.455 0.00 0.00 0.00 3.41
6613 7320 3.391296 ACATATACGGGGCATTCTGACTT 59.609 43.478 0.00 0.00 0.00 3.01
6614 7321 4.141482 ACATATACGGGGCATTCTGACTTT 60.141 41.667 0.00 0.00 0.00 2.66
6615 7322 2.396590 TACGGGGCATTCTGACTTTC 57.603 50.000 0.00 0.00 0.00 2.62
6616 7323 0.673644 ACGGGGCATTCTGACTTTCG 60.674 55.000 0.00 0.00 0.00 3.46
6617 7324 0.673644 CGGGGCATTCTGACTTTCGT 60.674 55.000 0.00 0.00 0.00 3.85
6618 7325 1.404986 CGGGGCATTCTGACTTTCGTA 60.405 52.381 0.00 0.00 0.00 3.43
6619 7326 2.280628 GGGGCATTCTGACTTTCGTAG 58.719 52.381 0.00 0.00 0.00 3.51
6620 7327 2.354805 GGGGCATTCTGACTTTCGTAGT 60.355 50.000 0.00 0.00 40.71 2.73
6621 7328 3.335579 GGGCATTCTGACTTTCGTAGTT 58.664 45.455 0.00 0.00 37.17 2.24
6622 7329 3.751698 GGGCATTCTGACTTTCGTAGTTT 59.248 43.478 0.00 0.00 37.17 2.66
6623 7330 4.933400 GGGCATTCTGACTTTCGTAGTTTA 59.067 41.667 0.00 0.00 37.17 2.01
6624 7331 5.063564 GGGCATTCTGACTTTCGTAGTTTAG 59.936 44.000 0.00 0.00 37.17 1.85
6625 7332 5.446073 GGCATTCTGACTTTCGTAGTTTAGC 60.446 44.000 0.00 0.00 37.17 3.09
6626 7333 5.446073 GCATTCTGACTTTCGTAGTTTAGCC 60.446 44.000 0.00 0.00 37.17 3.93
6627 7334 3.829948 TCTGACTTTCGTAGTTTAGCCG 58.170 45.455 0.00 0.00 37.17 5.52
6628 7335 2.921754 CTGACTTTCGTAGTTTAGCCGG 59.078 50.000 0.00 0.00 37.17 6.13
6629 7336 1.657594 GACTTTCGTAGTTTAGCCGGC 59.342 52.381 21.89 21.89 37.17 6.13
6630 7337 1.004595 CTTTCGTAGTTTAGCCGGCC 58.995 55.000 26.15 7.74 0.00 6.13
6631 7338 0.609662 TTTCGTAGTTTAGCCGGCCT 59.390 50.000 26.15 15.97 0.00 5.19
6632 7339 0.609662 TTCGTAGTTTAGCCGGCCTT 59.390 50.000 26.15 8.44 0.00 4.35
6633 7340 0.609662 TCGTAGTTTAGCCGGCCTTT 59.390 50.000 26.15 7.52 0.00 3.11
6634 7341 1.002315 TCGTAGTTTAGCCGGCCTTTT 59.998 47.619 26.15 7.06 0.00 2.27
6635 7342 2.233431 TCGTAGTTTAGCCGGCCTTTTA 59.767 45.455 26.15 5.79 0.00 1.52
6636 7343 2.606272 CGTAGTTTAGCCGGCCTTTTAG 59.394 50.000 26.15 4.25 0.00 1.85
6637 7344 2.873094 AGTTTAGCCGGCCTTTTAGT 57.127 45.000 26.15 4.77 0.00 2.24
6638 7345 2.433436 AGTTTAGCCGGCCTTTTAGTG 58.567 47.619 26.15 0.00 0.00 2.74
6639 7346 1.471287 GTTTAGCCGGCCTTTTAGTGG 59.529 52.381 26.15 0.00 0.00 4.00
6640 7347 0.694196 TTAGCCGGCCTTTTAGTGGT 59.306 50.000 26.15 2.07 0.00 4.16
6641 7348 0.251073 TAGCCGGCCTTTTAGTGGTC 59.749 55.000 26.15 0.00 0.00 4.02
6645 7352 3.929660 GGCCTTTTAGTGGTCGACT 57.070 52.632 16.46 0.00 38.88 4.18
6646 7353 1.439679 GGCCTTTTAGTGGTCGACTG 58.560 55.000 16.46 0.00 35.96 3.51
6647 7354 1.001633 GGCCTTTTAGTGGTCGACTGA 59.998 52.381 16.46 0.00 35.96 3.41
6648 7355 2.354805 GGCCTTTTAGTGGTCGACTGAT 60.355 50.000 16.46 3.89 35.96 2.90
6649 7356 3.118884 GGCCTTTTAGTGGTCGACTGATA 60.119 47.826 16.46 2.88 35.96 2.15
6650 7357 3.864003 GCCTTTTAGTGGTCGACTGATAC 59.136 47.826 16.46 9.71 35.96 2.24
6651 7358 4.381718 GCCTTTTAGTGGTCGACTGATACT 60.382 45.833 16.46 15.87 35.96 2.12
6652 7359 5.103000 CCTTTTAGTGGTCGACTGATACTG 58.897 45.833 16.46 3.88 35.96 2.74
6653 7360 4.713824 TTTAGTGGTCGACTGATACTGG 57.286 45.455 16.46 0.00 35.96 4.00
6654 7361 2.217510 AGTGGTCGACTGATACTGGT 57.782 50.000 16.46 0.00 31.75 4.00
6655 7362 1.819288 AGTGGTCGACTGATACTGGTG 59.181 52.381 16.46 0.00 31.75 4.17
6656 7363 1.544691 GTGGTCGACTGATACTGGTGT 59.455 52.381 16.46 0.00 0.00 4.16
6657 7364 1.544246 TGGTCGACTGATACTGGTGTG 59.456 52.381 16.46 0.00 0.00 3.82
6658 7365 1.816835 GGTCGACTGATACTGGTGTGA 59.183 52.381 16.46 0.00 0.00 3.58
6659 7366 2.427453 GGTCGACTGATACTGGTGTGAT 59.573 50.000 16.46 0.00 0.00 3.06
6660 7367 3.439293 GTCGACTGATACTGGTGTGATG 58.561 50.000 8.70 0.00 0.00 3.07
6661 7368 2.159240 TCGACTGATACTGGTGTGATGC 60.159 50.000 0.00 0.00 0.00 3.91
6662 7369 2.417243 CGACTGATACTGGTGTGATGCA 60.417 50.000 0.00 0.00 0.00 3.96
6663 7370 3.739209 CGACTGATACTGGTGTGATGCAT 60.739 47.826 0.00 0.00 0.00 3.96
6664 7371 4.499696 CGACTGATACTGGTGTGATGCATA 60.500 45.833 0.00 0.00 0.00 3.14
6665 7372 5.545588 GACTGATACTGGTGTGATGCATAT 58.454 41.667 0.00 0.00 0.00 1.78
6666 7373 5.933617 ACTGATACTGGTGTGATGCATATT 58.066 37.500 0.00 0.00 0.00 1.28
6667 7374 6.359804 ACTGATACTGGTGTGATGCATATTT 58.640 36.000 0.00 0.00 0.00 1.40
6668 7375 6.830324 ACTGATACTGGTGTGATGCATATTTT 59.170 34.615 0.00 0.00 0.00 1.82
6669 7376 7.012704 ACTGATACTGGTGTGATGCATATTTTC 59.987 37.037 0.00 0.00 0.00 2.29
6670 7377 7.056006 TGATACTGGTGTGATGCATATTTTCT 58.944 34.615 0.00 0.00 0.00 2.52
6671 7378 8.210265 TGATACTGGTGTGATGCATATTTTCTA 58.790 33.333 0.00 0.00 0.00 2.10
6672 7379 6.683974 ACTGGTGTGATGCATATTTTCTAC 57.316 37.500 0.00 0.00 0.00 2.59
6673 7380 6.418101 ACTGGTGTGATGCATATTTTCTACT 58.582 36.000 0.00 0.00 0.00 2.57
6674 7381 6.540189 ACTGGTGTGATGCATATTTTCTACTC 59.460 38.462 0.00 0.00 0.00 2.59
6675 7382 5.822519 TGGTGTGATGCATATTTTCTACTCC 59.177 40.000 0.00 2.28 0.00 3.85
6676 7383 6.058183 GGTGTGATGCATATTTTCTACTCCT 58.942 40.000 0.00 0.00 0.00 3.69
6677 7384 6.543831 GGTGTGATGCATATTTTCTACTCCTT 59.456 38.462 0.00 0.00 0.00 3.36
6678 7385 7.715249 GGTGTGATGCATATTTTCTACTCCTTA 59.285 37.037 0.00 0.00 0.00 2.69
6679 7386 8.768955 GTGTGATGCATATTTTCTACTCCTTAG 58.231 37.037 0.00 0.00 0.00 2.18
6680 7387 8.486210 TGTGATGCATATTTTCTACTCCTTAGT 58.514 33.333 0.00 0.00 39.91 2.24
6681 7388 9.982651 GTGATGCATATTTTCTACTCCTTAGTA 57.017 33.333 0.00 0.00 37.15 1.82
6691 7398 9.578439 TTTTCTACTCCTTAGTAATCTAAACGC 57.422 33.333 0.00 0.00 37.75 4.84
6692 7399 8.517062 TTCTACTCCTTAGTAATCTAAACGCT 57.483 34.615 0.00 0.00 37.75 5.07
6693 7400 8.152309 TCTACTCCTTAGTAATCTAAACGCTC 57.848 38.462 0.00 0.00 37.75 5.03
6694 7401 7.992033 TCTACTCCTTAGTAATCTAAACGCTCT 59.008 37.037 0.00 0.00 37.75 4.09
6695 7402 7.407393 ACTCCTTAGTAATCTAAACGCTCTT 57.593 36.000 0.00 0.00 35.98 2.85
6696 7403 8.517062 ACTCCTTAGTAATCTAAACGCTCTTA 57.483 34.615 0.00 0.00 35.98 2.10
6697 7404 9.134055 ACTCCTTAGTAATCTAAACGCTCTTAT 57.866 33.333 0.00 0.00 35.98 1.73
6709 7416 9.745880 TCTAAACGCTCTTATATTAGTTTGGAG 57.254 33.333 1.80 0.00 35.34 3.86
6710 7417 7.787725 AAACGCTCTTATATTAGTTTGGAGG 57.212 36.000 0.00 0.00 31.64 4.30
6711 7418 5.855045 ACGCTCTTATATTAGTTTGGAGGG 58.145 41.667 0.00 0.00 37.95 4.30
6712 7419 5.601313 ACGCTCTTATATTAGTTTGGAGGGA 59.399 40.000 0.00 0.00 36.56 4.20
6713 7420 6.159988 CGCTCTTATATTAGTTTGGAGGGAG 58.840 44.000 0.00 0.00 35.35 4.30
6714 7421 6.239345 CGCTCTTATATTAGTTTGGAGGGAGT 60.239 42.308 0.00 0.00 35.35 3.85
6715 7422 7.039923 CGCTCTTATATTAGTTTGGAGGGAGTA 60.040 40.741 0.00 0.00 35.35 2.59
6716 7423 8.089597 GCTCTTATATTAGTTTGGAGGGAGTAC 58.910 40.741 0.00 0.00 0.00 2.73
6717 7424 9.369672 CTCTTATATTAGTTTGGAGGGAGTACT 57.630 37.037 0.00 0.00 0.00 2.73
6724 7431 6.793505 AGTTTGGAGGGAGTACTAGTAATG 57.206 41.667 7.74 0.00 0.00 1.90
6725 7432 6.262207 AGTTTGGAGGGAGTACTAGTAATGT 58.738 40.000 7.74 0.00 0.00 2.71
6726 7433 6.154706 AGTTTGGAGGGAGTACTAGTAATGTG 59.845 42.308 7.74 0.00 0.00 3.21
6727 7434 3.958798 TGGAGGGAGTACTAGTAATGTGC 59.041 47.826 7.74 0.00 0.00 4.57
6728 7435 3.958798 GGAGGGAGTACTAGTAATGTGCA 59.041 47.826 7.74 0.00 0.00 4.57
6729 7436 4.589374 GGAGGGAGTACTAGTAATGTGCAT 59.411 45.833 7.74 0.00 0.00 3.96
6730 7437 5.509840 GGAGGGAGTACTAGTAATGTGCATG 60.510 48.000 7.74 0.00 0.00 4.06
6731 7438 4.962995 AGGGAGTACTAGTAATGTGCATGT 59.037 41.667 7.74 0.00 0.00 3.21
6732 7439 5.425539 AGGGAGTACTAGTAATGTGCATGTT 59.574 40.000 7.74 0.00 0.00 2.71
6747 7454 7.840342 TGTGCATGTTTTGTTGAATAACTTT 57.160 28.000 0.00 0.00 37.68 2.66
6749 7456 7.125113 GTGCATGTTTTGTTGAATAACTTTGG 58.875 34.615 0.00 0.00 37.68 3.28
6750 7457 6.259608 TGCATGTTTTGTTGAATAACTTTGGG 59.740 34.615 0.00 0.00 37.68 4.12
6751 7458 6.259829 GCATGTTTTGTTGAATAACTTTGGGT 59.740 34.615 0.00 0.00 37.68 4.51
6760 7470 4.513692 TGAATAACTTTGGGTCTGAACACG 59.486 41.667 0.00 0.00 0.00 4.49
6765 7475 1.877637 TTGGGTCTGAACACGTGATG 58.122 50.000 25.01 8.89 0.00 3.07
6771 7612 3.865745 GGTCTGAACACGTGATGGATTAG 59.134 47.826 25.01 9.99 0.00 1.73
6776 7617 6.878923 TCTGAACACGTGATGGATTAGATTTT 59.121 34.615 25.01 0.00 0.00 1.82
6778 7619 7.970384 TGAACACGTGATGGATTAGATTTTAC 58.030 34.615 25.01 0.00 0.00 2.01
6809 7650 7.874940 TCAAGTTTGATACCTCATGTTTTGAG 58.125 34.615 0.00 0.00 40.92 3.02
6826 7667 1.532437 TGAGAAAGCTTGACGCACATG 59.468 47.619 0.00 0.00 42.61 3.21
6831 7672 0.952497 AGCTTGACGCACATGACCAG 60.952 55.000 0.00 0.00 42.61 4.00
6834 7675 1.995484 CTTGACGCACATGACCAGTAG 59.005 52.381 0.00 0.00 0.00 2.57
6835 7676 0.389817 TGACGCACATGACCAGTAGC 60.390 55.000 0.00 0.00 0.00 3.58
6836 7677 0.389817 GACGCACATGACCAGTAGCA 60.390 55.000 0.00 0.00 0.00 3.49
6837 7678 0.034756 ACGCACATGACCAGTAGCAA 59.965 50.000 0.00 0.00 0.00 3.91
6838 7679 1.155889 CGCACATGACCAGTAGCAAA 58.844 50.000 0.00 0.00 0.00 3.68
6839 7680 1.129251 CGCACATGACCAGTAGCAAAG 59.871 52.381 0.00 0.00 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.181418 TGAAAAAGGCATCCTTCCTCCTT 60.181 43.478 0.00 0.00 43.92 3.36
17 18 2.629002 ACGCTCGTGAAAAAGGCAT 58.371 47.368 0.00 0.00 0.00 4.40
29 30 0.727398 GATTTCTTTCCCCACGCTCG 59.273 55.000 0.00 0.00 0.00 5.03
33 34 1.732259 CGTCTGATTTCTTTCCCCACG 59.268 52.381 0.00 0.00 0.00 4.94
35 36 1.613255 GCCGTCTGATTTCTTTCCCCA 60.613 52.381 0.00 0.00 0.00 4.96
121 122 2.159761 CCGACGCACGAAACAATGTAAT 60.160 45.455 0.00 0.00 45.77 1.89
143 144 3.426568 GTGCTTCTCGGCAGTGGC 61.427 66.667 6.62 6.62 43.25 5.01
221 229 8.547894 CGTCTATATGCATCTGTATCTAGTCTC 58.452 40.741 0.19 0.00 0.00 3.36
259 267 2.235891 GGAACAAACCGGGTGAATCTT 58.764 47.619 13.82 0.00 0.00 2.40
318 326 8.862097 ACTTAGATATACTCCCTCCAATCCTAT 58.138 37.037 0.00 0.00 0.00 2.57
320 328 7.122311 ACTTAGATATACTCCCTCCAATCCT 57.878 40.000 0.00 0.00 0.00 3.24
321 329 6.954684 TGACTTAGATATACTCCCTCCAATCC 59.045 42.308 0.00 0.00 0.00 3.01
323 331 8.980832 ATTGACTTAGATATACTCCCTCCAAT 57.019 34.615 0.00 0.00 0.00 3.16
368 378 3.178046 TGGCTGAGGTTGGTTGTATCTA 58.822 45.455 0.00 0.00 0.00 1.98
378 388 1.619654 TGGTTTGATGGCTGAGGTTG 58.380 50.000 0.00 0.00 0.00 3.77
381 391 1.747355 GACATGGTTTGATGGCTGAGG 59.253 52.381 0.00 0.00 0.00 3.86
412 422 4.082665 ACATCATTGGAGCAATCTCGAT 57.917 40.909 0.00 0.00 40.26 3.59
414 424 4.375272 AGTACATCATTGGAGCAATCTCG 58.625 43.478 0.00 0.00 40.26 4.04
415 425 5.363101 TGAGTACATCATTGGAGCAATCTC 58.637 41.667 0.00 0.00 31.05 2.75
433 443 7.014905 ACTCCTACACACTAAACATGTTGAGTA 59.985 37.037 25.26 14.61 32.59 2.59
434 444 6.169557 TCCTACACACTAAACATGTTGAGT 57.830 37.500 21.15 21.15 34.63 3.41
590 680 5.648092 AGTATATATTCGCTCATTTTGCCCC 59.352 40.000 0.00 0.00 0.00 5.80
640 901 5.353938 TGCACGTAGTACTCTCTTTGTTTT 58.646 37.500 0.00 0.00 41.61 2.43
671 932 9.103861 TGTAATGCACGTTGATATTTGATAGAA 57.896 29.630 0.00 0.00 0.00 2.10
672 933 8.547894 GTGTAATGCACGTTGATATTTGATAGA 58.452 33.333 0.00 0.00 38.45 1.98
673 934 8.699582 GTGTAATGCACGTTGATATTTGATAG 57.300 34.615 0.00 0.00 38.45 2.08
710 973 5.938125 GCACACTTCCCTATCTTTTCACTAA 59.062 40.000 0.00 0.00 0.00 2.24
718 981 1.912043 AGCAGCACACTTCCCTATCTT 59.088 47.619 0.00 0.00 0.00 2.40
722 987 1.055849 TCAAGCAGCACACTTCCCTA 58.944 50.000 0.00 0.00 0.00 3.53
725 990 1.678101 AGTTTCAAGCAGCACACTTCC 59.322 47.619 0.00 0.00 0.00 3.46
789 1054 3.503748 CCTCCATTCGAAAAAGCTTGTCT 59.496 43.478 0.00 0.00 0.00 3.41
791 1056 2.558359 CCCTCCATTCGAAAAAGCTTGT 59.442 45.455 0.00 0.00 0.00 3.16
792 1057 2.819608 TCCCTCCATTCGAAAAAGCTTG 59.180 45.455 0.00 0.00 0.00 4.01
794 1059 2.040412 ACTCCCTCCATTCGAAAAAGCT 59.960 45.455 0.00 0.00 0.00 3.74
795 1060 2.437413 ACTCCCTCCATTCGAAAAAGC 58.563 47.619 0.00 0.00 0.00 3.51
796 1061 4.575885 TGTACTCCCTCCATTCGAAAAAG 58.424 43.478 0.00 0.00 0.00 2.27
797 1062 4.627284 TGTACTCCCTCCATTCGAAAAA 57.373 40.909 0.00 0.00 0.00 1.94
798 1063 4.320870 GTTGTACTCCCTCCATTCGAAAA 58.679 43.478 0.00 0.00 0.00 2.29
799 1064 3.307199 GGTTGTACTCCCTCCATTCGAAA 60.307 47.826 0.00 0.00 0.00 3.46
800 1065 2.235402 GGTTGTACTCCCTCCATTCGAA 59.765 50.000 0.00 0.00 0.00 3.71
801 1066 1.829222 GGTTGTACTCCCTCCATTCGA 59.171 52.381 0.00 0.00 0.00 3.71
802 1067 1.831736 AGGTTGTACTCCCTCCATTCG 59.168 52.381 0.00 0.00 0.00 3.34
803 1068 5.130477 TCATTAGGTTGTACTCCCTCCATTC 59.870 44.000 7.11 0.00 32.08 2.67
804 1069 5.036916 TCATTAGGTTGTACTCCCTCCATT 58.963 41.667 7.11 0.00 32.08 3.16
805 1070 4.631234 TCATTAGGTTGTACTCCCTCCAT 58.369 43.478 7.11 0.37 32.08 3.41
806 1071 4.030913 CTCATTAGGTTGTACTCCCTCCA 58.969 47.826 7.11 0.00 32.08 3.86
807 1072 3.181464 GCTCATTAGGTTGTACTCCCTCC 60.181 52.174 7.11 0.00 32.08 4.30
808 1073 3.451178 TGCTCATTAGGTTGTACTCCCTC 59.549 47.826 7.11 0.00 32.08 4.30
809 1074 3.197983 GTGCTCATTAGGTTGTACTCCCT 59.802 47.826 8.63 8.63 34.74 4.20
810 1075 3.532542 GTGCTCATTAGGTTGTACTCCC 58.467 50.000 0.00 0.00 0.00 4.30
811 1076 3.187700 CGTGCTCATTAGGTTGTACTCC 58.812 50.000 0.00 0.00 0.00 3.85
812 1077 3.612860 CACGTGCTCATTAGGTTGTACTC 59.387 47.826 0.82 0.00 0.00 2.59
813 1078 3.006537 ACACGTGCTCATTAGGTTGTACT 59.993 43.478 17.22 0.00 0.00 2.73
814 1079 3.122948 CACACGTGCTCATTAGGTTGTAC 59.877 47.826 17.22 0.00 0.00 2.90
822 1087 0.682292 TCCACCACACGTGCTCATTA 59.318 50.000 17.22 0.00 41.53 1.90
827 1092 0.884704 GTGATTCCACCACACGTGCT 60.885 55.000 17.22 0.00 41.53 4.40
828 1093 1.574428 GTGATTCCACCACACGTGC 59.426 57.895 17.22 0.00 41.53 5.34
838 1103 2.502130 TGGTATAAGGTGCGTGATTCCA 59.498 45.455 0.00 0.00 0.00 3.53
839 1104 3.188159 TGGTATAAGGTGCGTGATTCC 57.812 47.619 0.00 0.00 0.00 3.01
841 1106 5.968528 TTTTTGGTATAAGGTGCGTGATT 57.031 34.783 0.00 0.00 0.00 2.57
861 1126 8.413899 TCGATTTTCCGAAGTTTTTCAATTTT 57.586 26.923 0.00 0.00 35.42 1.82
862 1127 7.995463 TCGATTTTCCGAAGTTTTTCAATTT 57.005 28.000 0.00 0.00 35.42 1.82
864 1129 7.865385 TGAATCGATTTTCCGAAGTTTTTCAAT 59.135 29.630 12.81 0.00 42.22 2.57
865 1130 7.166804 GTGAATCGATTTTCCGAAGTTTTTCAA 59.833 33.333 12.81 0.00 42.22 2.69
867 1132 6.087687 GGTGAATCGATTTTCCGAAGTTTTTC 59.912 38.462 12.81 0.00 42.22 2.29
868 1133 5.918576 GGTGAATCGATTTTCCGAAGTTTTT 59.081 36.000 12.81 0.00 42.22 1.94
869 1134 5.458015 GGTGAATCGATTTTCCGAAGTTTT 58.542 37.500 12.81 0.00 42.22 2.43
870 1135 4.082949 GGGTGAATCGATTTTCCGAAGTTT 60.083 41.667 12.81 0.00 42.22 2.66
872 1137 3.007635 GGGTGAATCGATTTTCCGAAGT 58.992 45.455 12.81 0.00 42.22 3.01
887 1160 8.619546 GTGAATGAATTTCAAATTTTGGGTGAA 58.380 29.630 9.18 0.00 45.71 3.18
898 1171 7.733969 TCCAATTCCAGTGAATGAATTTCAAA 58.266 30.769 2.68 0.00 45.71 2.69
911 1184 9.090692 CTGCTTTTATTATTTCCAATTCCAGTG 57.909 33.333 0.00 0.00 0.00 3.66
912 1185 8.260114 CCTGCTTTTATTATTTCCAATTCCAGT 58.740 33.333 0.00 0.00 0.00 4.00
913 1186 7.225341 GCCTGCTTTTATTATTTCCAATTCCAG 59.775 37.037 0.00 0.00 0.00 3.86
914 1187 7.047271 GCCTGCTTTTATTATTTCCAATTCCA 58.953 34.615 0.00 0.00 0.00 3.53
915 1188 7.047271 TGCCTGCTTTTATTATTTCCAATTCC 58.953 34.615 0.00 0.00 0.00 3.01
916 1189 7.254556 GCTGCCTGCTTTTATTATTTCCAATTC 60.255 37.037 0.00 0.00 38.95 2.17
917 1190 6.539826 GCTGCCTGCTTTTATTATTTCCAATT 59.460 34.615 0.00 0.00 38.95 2.32
918 1191 6.051074 GCTGCCTGCTTTTATTATTTCCAAT 58.949 36.000 0.00 0.00 38.95 3.16
919 1192 5.046735 TGCTGCCTGCTTTTATTATTTCCAA 60.047 36.000 0.00 0.00 43.37 3.53
920 1193 4.465660 TGCTGCCTGCTTTTATTATTTCCA 59.534 37.500 0.00 0.00 43.37 3.53
921 1194 4.805719 GTGCTGCCTGCTTTTATTATTTCC 59.194 41.667 0.00 0.00 43.37 3.13
922 1195 5.410067 TGTGCTGCCTGCTTTTATTATTTC 58.590 37.500 0.00 0.00 43.37 2.17
970 1243 2.613506 CGAAGCGAGCCGGGTTTTT 61.614 57.895 8.00 2.42 0.00 1.94
992 1265 2.277628 CGGTCGCTCTCGCTCTTC 60.278 66.667 0.00 0.00 35.26 2.87
1001 1274 3.000080 CTTGTGAACGCGGTCGCTC 62.000 63.158 34.65 20.50 39.84 5.03
1074 1348 0.248134 CATCGGAGTTCCTCGACGAC 60.248 60.000 0.00 0.00 38.25 4.34
1075 1349 1.374343 CCATCGGAGTTCCTCGACGA 61.374 60.000 0.00 0.00 38.25 4.20
1290 1576 0.183731 GGGGATCCGCCAGAAATTCT 59.816 55.000 17.92 0.00 38.95 2.40
1329 1617 3.343617 TCAATTCCATTCGACCCAACTC 58.656 45.455 0.00 0.00 0.00 3.01
1330 1618 3.347216 CTCAATTCCATTCGACCCAACT 58.653 45.455 0.00 0.00 0.00 3.16
1351 1639 0.393808 TAAGCCCTCAACCAATCCGC 60.394 55.000 0.00 0.00 0.00 5.54
1438 1761 2.594529 AATTAAATAGCATCGCGGCG 57.405 45.000 17.70 17.70 39.27 6.46
1461 1784 0.608035 TTCACCAATTCCCGACCTGC 60.608 55.000 0.00 0.00 0.00 4.85
1580 1910 5.908341 TGGACACCCAAAAAGTCAATTAAC 58.092 37.500 0.00 0.00 40.09 2.01
1611 1942 5.570589 CAGCTAAACAGCATTGCTAAAAGAC 59.429 40.000 11.55 0.49 36.40 3.01
1633 1964 1.899437 TTAGCAGGGGAGCGAACCAG 61.899 60.000 0.00 0.00 40.15 4.00
1639 1970 0.753262 ATGTACTTAGCAGGGGAGCG 59.247 55.000 0.00 0.00 40.15 5.03
1669 2000 4.218200 CAGTTGAGGCACACCATCAAATTA 59.782 41.667 0.00 0.00 35.92 1.40
1700 2033 4.019174 CCTCAGGTGCATATGAAAAAGGT 58.981 43.478 6.97 0.00 0.00 3.50
1701 2034 3.181483 GCCTCAGGTGCATATGAAAAAGG 60.181 47.826 6.97 5.99 0.00 3.11
1702 2035 3.698040 AGCCTCAGGTGCATATGAAAAAG 59.302 43.478 6.97 0.00 0.00 2.27
1703 2036 3.700538 AGCCTCAGGTGCATATGAAAAA 58.299 40.909 6.97 0.00 0.00 1.94
1722 2055 7.425606 TCCAGTTTGTGAAGAAGAAAATTAGC 58.574 34.615 0.00 0.00 0.00 3.09
1770 2103 6.323739 AGCCCCACAATTAACCATAAATACTG 59.676 38.462 0.00 0.00 0.00 2.74
1804 2137 6.172136 AGCTCTGAGCACAAGATATACATT 57.828 37.500 29.49 2.54 45.56 2.71
2105 2587 7.934457 AGTAGCAGAAACATATAAATTGGCTG 58.066 34.615 0.00 0.00 0.00 4.85
2173 2655 4.819630 TGAGCCGAGTAAAGAAAACACAAT 59.180 37.500 0.00 0.00 0.00 2.71
2175 2657 3.558418 GTGAGCCGAGTAAAGAAAACACA 59.442 43.478 0.00 0.00 0.00 3.72
2176 2658 3.558418 TGTGAGCCGAGTAAAGAAAACAC 59.442 43.478 0.00 0.00 0.00 3.32
2245 2727 4.904241 AGTCTTCCTGGACAGATCAAAAG 58.096 43.478 0.00 0.00 38.57 2.27
2250 2732 4.646945 TCATGTAGTCTTCCTGGACAGATC 59.353 45.833 0.00 0.00 38.57 2.75
2323 2805 3.059570 GTGACTGCATTCGTCGTTCTAAG 59.940 47.826 0.00 0.00 34.17 2.18
2324 2806 2.984471 GTGACTGCATTCGTCGTTCTAA 59.016 45.455 0.00 0.00 34.17 2.10
2491 2973 2.279935 TGTTGCGAGGGTAAACCATT 57.720 45.000 0.81 0.00 43.89 3.16
2511 2993 1.676006 CAACCTCGGTCTGCAAGTTTT 59.324 47.619 0.00 0.00 33.76 2.43
2556 3038 2.787473 TGGACGCTGATCCAGAATTT 57.213 45.000 0.00 0.00 44.14 1.82
2592 3074 2.672098 CTGGCCCTACTGTAGTGATCT 58.328 52.381 13.42 0.00 0.00 2.75
2646 3128 2.344950 CATGTTGGCTCTGACTCTGAC 58.655 52.381 0.00 0.00 0.00 3.51
2694 3176 1.000896 GGTGGGCTGCAACCTACAT 60.001 57.895 22.30 0.00 42.69 2.29
2726 3208 2.893682 GAATTCGGTCCCCCAGCTGG 62.894 65.000 26.87 26.87 0.00 4.85
2740 3222 6.749923 AGTAGGTGATTTTGCAGAGAATTC 57.250 37.500 0.00 0.00 0.00 2.17
2812 3294 4.568359 GCTCTTGAACTTCGCTGATTCATA 59.432 41.667 0.00 0.00 32.61 2.15
2950 3432 6.147821 CCGATGACTGTAACAGATTTGTCTTT 59.852 38.462 0.00 0.00 36.23 2.52
2951 3433 5.639506 CCGATGACTGTAACAGATTTGTCTT 59.360 40.000 0.00 0.00 36.23 3.01
2967 3449 1.134580 CAGATGCCTTGACCGATGACT 60.135 52.381 0.00 0.00 0.00 3.41
2972 3454 0.389817 CGTTCAGATGCCTTGACCGA 60.390 55.000 0.00 0.00 0.00 4.69
2991 3473 1.410882 GAGGTGGAGTCATAGGCTCAC 59.589 57.143 0.00 0.00 34.83 3.51
3096 3578 9.606631 AAAGTTTTATGGCATTCACAGTTTTTA 57.393 25.926 4.78 0.00 0.00 1.52
3867 4373 0.458669 GTTGAGGATGCATTGCCAGG 59.541 55.000 6.12 0.00 0.00 4.45
3886 4392 2.640826 TCCTACCTTTTACCACCACTGG 59.359 50.000 0.00 0.00 44.26 4.00
4263 4777 3.389983 GGTGGTGGTGTTCTAGCCATATA 59.610 47.826 0.00 0.00 37.09 0.86
4288 4802 1.336240 GGTTGCCATTGCTCTGTTCAC 60.336 52.381 0.00 0.00 38.71 3.18
4439 5022 0.316204 GTGCTGGTGCTGCTGAATTT 59.684 50.000 0.00 0.00 40.48 1.82
4564 5150 1.546029 TCACCGATGTTCTGTCTCCAG 59.454 52.381 0.00 0.00 40.25 3.86
4578 5164 0.400213 ATGGGCTTTTCAGTCACCGA 59.600 50.000 0.00 0.00 0.00 4.69
4787 5374 1.485895 GCCAATTTGCCCATGTGGTAT 59.514 47.619 0.00 0.00 36.04 2.73
4915 5508 1.076485 GCCATCCATGCTTCCCAGT 60.076 57.895 0.00 0.00 0.00 4.00
5368 5992 0.391661 ACTGCAGGATGTGGCGTAAG 60.392 55.000 19.93 0.00 39.31 2.34
5384 6008 2.758979 AGTCAGTACATCGGGGTAACTG 59.241 50.000 0.00 0.00 0.00 3.16
5527 6157 6.712998 CAGTAGTAGTAGACTAGCATGGACAT 59.287 42.308 0.00 0.00 41.47 3.06
5620 6260 1.043116 TACCGAGGCTGAGATGGTGG 61.043 60.000 0.00 0.00 34.18 4.61
5866 6506 2.571653 ACATTTCTGCTACTGCCCTGTA 59.428 45.455 0.00 0.00 38.71 2.74
5950 6590 3.998341 GGCGTTCACCACTCTACATTTAA 59.002 43.478 0.00 0.00 0.00 1.52
5974 6614 4.063998 TCACATATCTGCAGTCATCCAC 57.936 45.455 14.67 0.00 0.00 4.02
6034 6674 6.534079 ACACATATCTACAGTTTCGGCTTTAC 59.466 38.462 0.00 0.00 0.00 2.01
6039 6679 5.350365 TCAAACACATATCTACAGTTTCGGC 59.650 40.000 0.00 0.00 30.68 5.54
6207 6913 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
6208 6914 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
6209 6915 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
6210 6916 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
6211 6917 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
6236 6942 9.961265 CGTATGTGGTTTATAGTGAAATCTCTA 57.039 33.333 0.00 0.00 0.00 2.43
6238 6944 7.924412 TCCGTATGTGGTTTATAGTGAAATCTC 59.076 37.037 0.00 0.00 0.00 2.75
6239 6945 7.788026 TCCGTATGTGGTTTATAGTGAAATCT 58.212 34.615 0.00 0.00 0.00 2.40
6241 6947 7.990886 ACATCCGTATGTGGTTTATAGTGAAAT 59.009 33.333 0.00 0.00 44.79 2.17
6242 6948 7.332557 ACATCCGTATGTGGTTTATAGTGAAA 58.667 34.615 0.00 0.00 44.79 2.69
6243 6949 6.880484 ACATCCGTATGTGGTTTATAGTGAA 58.120 36.000 0.00 0.00 44.79 3.18
6244 6950 6.474140 ACATCCGTATGTGGTTTATAGTGA 57.526 37.500 0.00 0.00 44.79 3.41
6251 6957 7.764443 GCATCTATATACATCCGTATGTGGTTT 59.236 37.037 3.56 0.00 45.99 3.27
6252 6958 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
6253 6959 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
6254 6960 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
6255 6961 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
6260 6966 8.972127 ACTCTAAATGCATCTATATACATCCGT 58.028 33.333 0.00 0.00 0.00 4.69
6261 6967 9.242477 CACTCTAAATGCATCTATATACATCCG 57.758 37.037 0.00 0.00 0.00 4.18
6270 6976 9.703892 GTGAATCTACACTCTAAATGCATCTAT 57.296 33.333 0.00 0.00 37.73 1.98
6271 6977 8.918116 AGTGAATCTACACTCTAAATGCATCTA 58.082 33.333 0.00 0.00 46.36 1.98
6272 6978 7.790027 AGTGAATCTACACTCTAAATGCATCT 58.210 34.615 0.00 0.00 46.36 2.90
6285 6991 6.148480 ACAGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
6286 6992 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
6287 6993 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
6288 6994 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
6289 6995 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
6290 6996 6.965500 CACATACAGAGCAAAATGAGTGAATC 59.035 38.462 0.00 0.00 0.00 2.52
6291 6997 6.127814 CCACATACAGAGCAAAATGAGTGAAT 60.128 38.462 0.00 0.00 0.00 2.57
6292 6998 5.181811 CCACATACAGAGCAAAATGAGTGAA 59.818 40.000 0.00 0.00 0.00 3.18
6293 6999 4.696877 CCACATACAGAGCAAAATGAGTGA 59.303 41.667 0.00 0.00 0.00 3.41
6294 7000 4.456911 ACCACATACAGAGCAAAATGAGTG 59.543 41.667 0.00 0.00 0.00 3.51
6295 7001 4.655963 ACCACATACAGAGCAAAATGAGT 58.344 39.130 0.00 0.00 0.00 3.41
6296 7002 4.095483 GGACCACATACAGAGCAAAATGAG 59.905 45.833 0.00 0.00 0.00 2.90
6297 7003 4.009675 GGACCACATACAGAGCAAAATGA 58.990 43.478 0.00 0.00 0.00 2.57
6298 7004 3.758023 TGGACCACATACAGAGCAAAATG 59.242 43.478 0.00 0.00 0.00 2.32
6299 7005 4.032960 TGGACCACATACAGAGCAAAAT 57.967 40.909 0.00 0.00 0.00 1.82
6300 7006 3.500448 TGGACCACATACAGAGCAAAA 57.500 42.857 0.00 0.00 0.00 2.44
6301 7007 3.719268 ATGGACCACATACAGAGCAAA 57.281 42.857 0.00 0.00 38.26 3.68
6302 7008 4.835284 TTATGGACCACATACAGAGCAA 57.165 40.909 0.00 0.00 41.61 3.91
6303 7009 5.838521 TCTATTATGGACCACATACAGAGCA 59.161 40.000 0.00 0.00 41.61 4.26
6304 7010 6.346477 TCTATTATGGACCACATACAGAGC 57.654 41.667 0.00 0.00 41.61 4.09
6305 7011 8.811017 AGATTCTATTATGGACCACATACAGAG 58.189 37.037 0.00 0.00 41.61 3.35
6306 7012 8.727100 AGATTCTATTATGGACCACATACAGA 57.273 34.615 0.00 0.00 41.61 3.41
6307 7013 8.037758 GGAGATTCTATTATGGACCACATACAG 58.962 40.741 0.00 0.00 41.61 2.74
6308 7014 7.734865 AGGAGATTCTATTATGGACCACATACA 59.265 37.037 0.00 0.00 41.61 2.29
6309 7015 8.140112 AGGAGATTCTATTATGGACCACATAC 57.860 38.462 0.00 0.00 41.61 2.39
6310 7016 8.742125 AAGGAGATTCTATTATGGACCACATA 57.258 34.615 0.00 0.00 41.03 2.29
6311 7017 7.293299 TGAAGGAGATTCTATTATGGACCACAT 59.707 37.037 0.00 0.00 39.94 3.21
6312 7018 6.615316 TGAAGGAGATTCTATTATGGACCACA 59.385 38.462 0.00 0.00 38.83 4.17
6313 7019 7.067496 TGAAGGAGATTCTATTATGGACCAC 57.933 40.000 0.00 0.00 38.83 4.16
6314 7020 7.690454 TTGAAGGAGATTCTATTATGGACCA 57.310 36.000 0.00 0.00 38.83 4.02
6315 7021 8.432805 TCTTTGAAGGAGATTCTATTATGGACC 58.567 37.037 0.00 0.00 38.83 4.46
6316 7022 9.267084 GTCTTTGAAGGAGATTCTATTATGGAC 57.733 37.037 0.00 0.00 38.83 4.02
6317 7023 9.218525 AGTCTTTGAAGGAGATTCTATTATGGA 57.781 33.333 0.00 0.00 38.83 3.41
6318 7024 9.844257 AAGTCTTTGAAGGAGATTCTATTATGG 57.156 33.333 0.00 0.00 38.83 2.74
6331 7037 9.595823 CGTTCCTAAATATAAGTCTTTGAAGGA 57.404 33.333 0.00 0.00 0.00 3.36
6332 7038 8.827677 CCGTTCCTAAATATAAGTCTTTGAAGG 58.172 37.037 0.00 0.00 0.00 3.46
6333 7039 9.595823 TCCGTTCCTAAATATAAGTCTTTGAAG 57.404 33.333 0.00 0.00 0.00 3.02
6334 7040 9.947433 TTCCGTTCCTAAATATAAGTCTTTGAA 57.053 29.630 0.00 0.00 0.00 2.69
6345 7051 8.980481 ACAGAAATCATTCCGTTCCTAAATAT 57.020 30.769 0.00 0.00 36.12 1.28
6346 7052 8.801882 AACAGAAATCATTCCGTTCCTAAATA 57.198 30.769 0.00 0.00 32.02 1.40
6347 7053 7.703058 AACAGAAATCATTCCGTTCCTAAAT 57.297 32.000 0.00 0.00 32.02 1.40
6348 7054 7.141100 GAACAGAAATCATTCCGTTCCTAAA 57.859 36.000 6.45 0.00 42.93 1.85
6349 7055 6.737254 GAACAGAAATCATTCCGTTCCTAA 57.263 37.500 6.45 0.00 42.93 2.69
6353 7059 5.048713 ACTTGGAACAGAAATCATTCCGTTC 60.049 40.000 8.46 8.46 45.78 3.95
6354 7060 4.827284 ACTTGGAACAGAAATCATTCCGTT 59.173 37.500 10.24 0.00 44.17 4.44
6355 7061 4.398319 ACTTGGAACAGAAATCATTCCGT 58.602 39.130 10.24 3.24 44.17 4.69
6356 7062 5.182001 AGAACTTGGAACAGAAATCATTCCG 59.818 40.000 10.24 2.79 44.17 4.30
6357 7063 6.581171 AGAACTTGGAACAGAAATCATTCC 57.419 37.500 8.70 8.70 42.39 3.01
6358 7064 8.787852 ACTTAGAACTTGGAACAGAAATCATTC 58.212 33.333 0.00 0.00 42.39 2.67
6489 7195 5.088730 TCCAACAGGCCTTCTAACTAACTA 58.911 41.667 0.00 0.00 0.00 2.24
6534 7241 1.265365 GCTTCACTTCACAAGCAGACC 59.735 52.381 0.00 0.00 43.87 3.85
6535 7242 2.216898 AGCTTCACTTCACAAGCAGAC 58.783 47.619 6.44 0.00 46.37 3.51
6564 7271 5.155278 ACCAACCATCAACTACGTATCAA 57.845 39.130 0.00 0.00 0.00 2.57
6569 7276 2.774687 GGAACCAACCATCAACTACGT 58.225 47.619 0.00 0.00 0.00 3.57
6588 7295 1.351017 AGAATGCCCCGTATATGTGGG 59.649 52.381 12.07 12.07 45.58 4.61
6589 7296 2.038426 TCAGAATGCCCCGTATATGTGG 59.962 50.000 0.00 0.00 34.76 4.17
6590 7297 3.067106 GTCAGAATGCCCCGTATATGTG 58.933 50.000 0.00 0.00 34.76 3.21
6591 7298 2.972713 AGTCAGAATGCCCCGTATATGT 59.027 45.455 0.00 0.00 34.76 2.29
6592 7299 3.685139 AGTCAGAATGCCCCGTATATG 57.315 47.619 0.00 0.00 34.76 1.78
6593 7300 4.642429 GAAAGTCAGAATGCCCCGTATAT 58.358 43.478 0.00 0.00 34.76 0.86
6594 7301 3.491964 CGAAAGTCAGAATGCCCCGTATA 60.492 47.826 0.00 0.00 34.76 1.47
6595 7302 2.741878 CGAAAGTCAGAATGCCCCGTAT 60.742 50.000 0.00 0.00 34.76 3.06
6596 7303 1.404986 CGAAAGTCAGAATGCCCCGTA 60.405 52.381 0.00 0.00 34.76 4.02
6597 7304 0.673644 CGAAAGTCAGAATGCCCCGT 60.674 55.000 0.00 0.00 34.76 5.28
6598 7305 0.673644 ACGAAAGTCAGAATGCCCCG 60.674 55.000 0.00 0.00 44.19 5.73
6599 7306 3.249687 ACGAAAGTCAGAATGCCCC 57.750 52.632 0.00 0.00 44.19 5.80
6611 7318 1.004595 GGCCGGCTAAACTACGAAAG 58.995 55.000 28.56 0.00 0.00 2.62
6612 7319 0.609662 AGGCCGGCTAAACTACGAAA 59.390 50.000 28.56 0.00 0.00 3.46
6613 7320 0.609662 AAGGCCGGCTAAACTACGAA 59.390 50.000 28.56 0.00 0.00 3.85
6614 7321 0.609662 AAAGGCCGGCTAAACTACGA 59.390 50.000 28.56 0.00 0.00 3.43
6615 7322 1.445871 AAAAGGCCGGCTAAACTACG 58.554 50.000 28.56 0.00 0.00 3.51
6616 7323 3.373130 CACTAAAAGGCCGGCTAAACTAC 59.627 47.826 28.56 7.55 0.00 2.73
6617 7324 3.602483 CACTAAAAGGCCGGCTAAACTA 58.398 45.455 28.56 10.68 0.00 2.24
6618 7325 2.433436 CACTAAAAGGCCGGCTAAACT 58.567 47.619 28.56 12.32 0.00 2.66
6619 7326 1.471287 CCACTAAAAGGCCGGCTAAAC 59.529 52.381 28.56 9.72 0.00 2.01
6620 7327 1.074244 ACCACTAAAAGGCCGGCTAAA 59.926 47.619 28.56 6.86 0.00 1.85
6621 7328 0.694196 ACCACTAAAAGGCCGGCTAA 59.306 50.000 28.56 6.48 0.00 3.09
6622 7329 0.251073 GACCACTAAAAGGCCGGCTA 59.749 55.000 28.56 9.91 0.00 3.93
6623 7330 1.002502 GACCACTAAAAGGCCGGCT 60.003 57.895 28.56 9.11 0.00 5.52
6624 7331 2.396157 CGACCACTAAAAGGCCGGC 61.396 63.158 21.18 21.18 0.00 6.13
6625 7332 1.017701 GTCGACCACTAAAAGGCCGG 61.018 60.000 3.51 0.00 32.54 6.13
6626 7333 0.037605 AGTCGACCACTAAAAGGCCG 60.038 55.000 13.01 0.00 31.37 6.13
6627 7334 1.001633 TCAGTCGACCACTAAAAGGCC 59.998 52.381 13.01 0.00 32.21 5.19
6628 7335 2.450609 TCAGTCGACCACTAAAAGGC 57.549 50.000 13.01 0.00 32.21 4.35
6629 7336 5.103000 CAGTATCAGTCGACCACTAAAAGG 58.897 45.833 13.01 0.00 32.21 3.11
6630 7337 5.103000 CCAGTATCAGTCGACCACTAAAAG 58.897 45.833 13.01 0.00 32.21 2.27
6631 7338 4.525487 ACCAGTATCAGTCGACCACTAAAA 59.475 41.667 13.01 0.00 32.21 1.52
6632 7339 4.082408 CACCAGTATCAGTCGACCACTAAA 60.082 45.833 13.01 0.00 32.21 1.85
6633 7340 3.442625 CACCAGTATCAGTCGACCACTAA 59.557 47.826 13.01 0.00 32.21 2.24
6634 7341 3.014623 CACCAGTATCAGTCGACCACTA 58.985 50.000 13.01 0.00 32.21 2.74
6635 7342 1.819288 CACCAGTATCAGTCGACCACT 59.181 52.381 13.01 7.87 34.67 4.00
6636 7343 1.544691 ACACCAGTATCAGTCGACCAC 59.455 52.381 13.01 5.54 0.00 4.16
6637 7344 1.544246 CACACCAGTATCAGTCGACCA 59.456 52.381 13.01 0.00 0.00 4.02
6638 7345 1.816835 TCACACCAGTATCAGTCGACC 59.183 52.381 13.01 0.00 0.00 4.79
6639 7346 3.439293 CATCACACCAGTATCAGTCGAC 58.561 50.000 7.70 7.70 0.00 4.20
6640 7347 2.159240 GCATCACACCAGTATCAGTCGA 60.159 50.000 0.00 0.00 0.00 4.20
6641 7348 2.196749 GCATCACACCAGTATCAGTCG 58.803 52.381 0.00 0.00 0.00 4.18
6642 7349 3.251479 TGCATCACACCAGTATCAGTC 57.749 47.619 0.00 0.00 0.00 3.51
6643 7350 3.920231 ATGCATCACACCAGTATCAGT 57.080 42.857 0.00 0.00 0.00 3.41
6644 7351 6.872628 AAATATGCATCACACCAGTATCAG 57.127 37.500 0.19 0.00 0.00 2.90
6645 7352 7.056006 AGAAAATATGCATCACACCAGTATCA 58.944 34.615 0.19 0.00 0.00 2.15
6646 7353 7.502120 AGAAAATATGCATCACACCAGTATC 57.498 36.000 0.19 0.00 0.00 2.24
6647 7354 8.213679 AGTAGAAAATATGCATCACACCAGTAT 58.786 33.333 0.19 0.00 0.00 2.12
6648 7355 7.564793 AGTAGAAAATATGCATCACACCAGTA 58.435 34.615 0.19 0.00 0.00 2.74
6649 7356 6.418101 AGTAGAAAATATGCATCACACCAGT 58.582 36.000 0.19 0.00 0.00 4.00
6650 7357 6.017605 GGAGTAGAAAATATGCATCACACCAG 60.018 42.308 0.19 0.00 0.00 4.00
6651 7358 5.822519 GGAGTAGAAAATATGCATCACACCA 59.177 40.000 0.19 0.00 0.00 4.17
6652 7359 6.058183 AGGAGTAGAAAATATGCATCACACC 58.942 40.000 0.19 0.00 0.00 4.16
6653 7360 7.559590 AAGGAGTAGAAAATATGCATCACAC 57.440 36.000 0.19 0.00 0.00 3.82
6654 7361 8.486210 ACTAAGGAGTAGAAAATATGCATCACA 58.514 33.333 0.19 0.00 32.65 3.58
6655 7362 8.894768 ACTAAGGAGTAGAAAATATGCATCAC 57.105 34.615 0.19 0.00 32.65 3.06
6665 7372 9.578439 GCGTTTAGATTACTAAGGAGTAGAAAA 57.422 33.333 0.00 0.00 39.36 2.29
6666 7373 8.964772 AGCGTTTAGATTACTAAGGAGTAGAAA 58.035 33.333 0.00 0.00 39.36 2.52
6667 7374 8.517062 AGCGTTTAGATTACTAAGGAGTAGAA 57.483 34.615 0.00 0.00 39.36 2.10
6668 7375 7.992033 AGAGCGTTTAGATTACTAAGGAGTAGA 59.008 37.037 0.00 0.00 39.36 2.59
6669 7376 8.156994 AGAGCGTTTAGATTACTAAGGAGTAG 57.843 38.462 0.00 0.00 39.36 2.57
6670 7377 8.517062 AAGAGCGTTTAGATTACTAAGGAGTA 57.483 34.615 0.00 0.00 39.36 2.59
6671 7378 7.407393 AAGAGCGTTTAGATTACTAAGGAGT 57.593 36.000 0.00 0.00 39.36 3.85
6683 7390 9.745880 CTCCAAACTAATATAAGAGCGTTTAGA 57.254 33.333 0.00 0.00 0.00 2.10
6684 7391 8.979574 CCTCCAAACTAATATAAGAGCGTTTAG 58.020 37.037 0.00 0.00 0.00 1.85
6685 7392 7.929785 CCCTCCAAACTAATATAAGAGCGTTTA 59.070 37.037 0.00 0.00 0.00 2.01
6686 7393 6.766467 CCCTCCAAACTAATATAAGAGCGTTT 59.234 38.462 0.00 0.00 0.00 3.60
6687 7394 6.099269 TCCCTCCAAACTAATATAAGAGCGTT 59.901 38.462 0.00 0.00 0.00 4.84
6688 7395 5.601313 TCCCTCCAAACTAATATAAGAGCGT 59.399 40.000 0.00 0.00 0.00 5.07
6689 7396 6.097915 TCCCTCCAAACTAATATAAGAGCG 57.902 41.667 0.00 0.00 0.00 5.03
6690 7397 7.068686 ACTCCCTCCAAACTAATATAAGAGC 57.931 40.000 0.00 0.00 0.00 4.09
6691 7398 9.369672 AGTACTCCCTCCAAACTAATATAAGAG 57.630 37.037 0.00 0.00 0.00 2.85
6698 7405 8.925338 CATTACTAGTACTCCCTCCAAACTAAT 58.075 37.037 0.91 0.00 0.00 1.73
6699 7406 7.897565 ACATTACTAGTACTCCCTCCAAACTAA 59.102 37.037 0.91 0.00 0.00 2.24
6700 7407 7.341256 CACATTACTAGTACTCCCTCCAAACTA 59.659 40.741 0.91 0.00 0.00 2.24
6701 7408 6.154706 CACATTACTAGTACTCCCTCCAAACT 59.845 42.308 0.91 0.00 0.00 2.66
6702 7409 6.338937 CACATTACTAGTACTCCCTCCAAAC 58.661 44.000 0.91 0.00 0.00 2.93
6703 7410 5.105064 GCACATTACTAGTACTCCCTCCAAA 60.105 44.000 0.91 0.00 0.00 3.28
6704 7411 4.404715 GCACATTACTAGTACTCCCTCCAA 59.595 45.833 0.91 0.00 0.00 3.53
6705 7412 3.958798 GCACATTACTAGTACTCCCTCCA 59.041 47.826 0.91 0.00 0.00 3.86
6706 7413 3.958798 TGCACATTACTAGTACTCCCTCC 59.041 47.826 0.91 0.00 0.00 4.30
6707 7414 5.069251 ACATGCACATTACTAGTACTCCCTC 59.931 44.000 0.91 0.00 0.00 4.30
6708 7415 4.962995 ACATGCACATTACTAGTACTCCCT 59.037 41.667 0.91 0.00 0.00 4.20
6709 7416 5.277857 ACATGCACATTACTAGTACTCCC 57.722 43.478 0.91 0.00 0.00 4.30
6710 7417 7.119262 ACAAAACATGCACATTACTAGTACTCC 59.881 37.037 0.91 0.00 0.00 3.85
6711 7418 8.029642 ACAAAACATGCACATTACTAGTACTC 57.970 34.615 0.91 0.00 0.00 2.59
6712 7419 7.979444 ACAAAACATGCACATTACTAGTACT 57.021 32.000 0.91 0.00 0.00 2.73
6713 7420 8.286800 TCAACAAAACATGCACATTACTAGTAC 58.713 33.333 0.91 0.00 0.00 2.73
6714 7421 8.384607 TCAACAAAACATGCACATTACTAGTA 57.615 30.769 0.00 0.00 0.00 1.82
6715 7422 7.270757 TCAACAAAACATGCACATTACTAGT 57.729 32.000 0.00 0.00 0.00 2.57
6716 7423 8.746922 ATTCAACAAAACATGCACATTACTAG 57.253 30.769 0.00 0.00 0.00 2.57
6718 7425 8.977505 GTTATTCAACAAAACATGCACATTACT 58.022 29.630 0.00 0.00 34.60 2.24
6719 7426 8.977505 AGTTATTCAACAAAACATGCACATTAC 58.022 29.630 0.00 0.00 37.10 1.89
6720 7427 9.539825 AAGTTATTCAACAAAACATGCACATTA 57.460 25.926 0.00 0.00 37.10 1.90
6721 7428 8.436046 AAGTTATTCAACAAAACATGCACATT 57.564 26.923 0.00 0.00 37.10 2.71
6722 7429 8.336806 CAAAGTTATTCAACAAAACATGCACAT 58.663 29.630 0.00 0.00 37.10 3.21
6723 7430 7.201591 CCAAAGTTATTCAACAAAACATGCACA 60.202 33.333 0.00 0.00 37.10 4.57
6724 7431 7.125113 CCAAAGTTATTCAACAAAACATGCAC 58.875 34.615 0.00 0.00 37.10 4.57
6725 7432 6.259608 CCCAAAGTTATTCAACAAAACATGCA 59.740 34.615 0.00 0.00 37.10 3.96
6726 7433 6.259829 ACCCAAAGTTATTCAACAAAACATGC 59.740 34.615 0.00 0.00 37.10 4.06
6727 7434 7.710475 AGACCCAAAGTTATTCAACAAAACATG 59.290 33.333 0.00 0.00 37.10 3.21
6728 7435 7.710475 CAGACCCAAAGTTATTCAACAAAACAT 59.290 33.333 0.00 0.00 37.10 2.71
6729 7436 7.038659 CAGACCCAAAGTTATTCAACAAAACA 58.961 34.615 0.00 0.00 37.10 2.83
6730 7437 7.262048 TCAGACCCAAAGTTATTCAACAAAAC 58.738 34.615 0.00 0.00 37.10 2.43
6731 7438 7.411486 TCAGACCCAAAGTTATTCAACAAAA 57.589 32.000 0.00 0.00 37.10 2.44
6732 7439 7.093727 TGTTCAGACCCAAAGTTATTCAACAAA 60.094 33.333 0.00 0.00 37.10 2.83
6743 7450 1.208535 TCACGTGTTCAGACCCAAAGT 59.791 47.619 16.51 0.00 0.00 2.66
6747 7454 0.034756 CCATCACGTGTTCAGACCCA 59.965 55.000 16.51 0.00 0.00 4.51
6749 7456 2.386661 ATCCATCACGTGTTCAGACC 57.613 50.000 16.51 0.00 0.00 3.85
6750 7457 4.744570 TCTAATCCATCACGTGTTCAGAC 58.255 43.478 16.51 0.00 0.00 3.51
6751 7458 5.598416 ATCTAATCCATCACGTGTTCAGA 57.402 39.130 16.51 8.94 0.00 3.27
6776 7617 9.112725 CATGAGGTATCAAACTTGATGAATGTA 57.887 33.333 13.96 0.00 46.68 2.29
6778 7619 7.993101 ACATGAGGTATCAAACTTGATGAATG 58.007 34.615 13.96 11.61 46.68 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.