Multiple sequence alignment - TraesCS2D01G480600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G480600 chr2D 100.000 5325 0 0 1 5325 582868051 582873375 0.000000e+00 9834.0
1 TraesCS2D01G480600 chr2D 88.363 507 41 10 987 1487 621954058 621953564 1.280000e-165 593.0
2 TraesCS2D01G480600 chr2D 86.706 504 58 6 4829 5325 271471832 271472333 7.790000e-153 551.0
3 TraesCS2D01G480600 chr2D 87.234 282 9 12 151 406 100772206 100771926 4.030000e-76 296.0
4 TraesCS2D01G480600 chr2D 92.424 132 10 0 1553 1684 621953448 621953317 7.040000e-44 189.0
5 TraesCS2D01G480600 chr2D 100.000 30 0 0 1707 1736 298696263 298696234 7.450000e-04 56.5
6 TraesCS2D01G480600 chr2B 94.533 2140 95 5 2344 4482 719585737 719583619 0.000000e+00 3284.0
7 TraesCS2D01G480600 chr2B 95.748 682 25 4 2064 2742 59475420 59476100 0.000000e+00 1096.0
8 TraesCS2D01G480600 chr2B 94.343 548 23 2 1144 1684 785860452 785860998 0.000000e+00 833.0
9 TraesCS2D01G480600 chr2B 93.090 521 35 1 1164 1684 719635513 719634994 0.000000e+00 761.0
10 TraesCS2D01G480600 chr2B 86.536 713 60 20 505 1215 737640317 737640995 0.000000e+00 752.0
11 TraesCS2D01G480600 chr2B 90.976 543 39 2 1149 1684 737641078 737641617 0.000000e+00 723.0
12 TraesCS2D01G480600 chr2B 87.612 557 52 13 987 1532 763838909 763839459 9.730000e-177 630.0
13 TraesCS2D01G480600 chr2B 89.209 417 31 9 505 920 312365145 312364742 4.760000e-140 508.0
14 TraesCS2D01G480600 chr2B 91.597 357 24 4 505 858 785859526 785859879 6.200000e-134 488.0
15 TraesCS2D01G480600 chr2B 96.875 288 9 0 1397 1684 312363606 312363319 2.880000e-132 483.0
16 TraesCS2D01G480600 chr2B 78.730 677 111 27 2713 3379 375202282 375202935 6.380000e-114 422.0
17 TraesCS2D01G480600 chr2B 95.872 218 7 1 1698 1915 312363212 312362997 8.490000e-93 351.0
18 TraesCS2D01G480600 chr2B 94.037 218 13 0 1698 1915 719634887 719634670 1.110000e-86 331.0
19 TraesCS2D01G480600 chr2B 94.037 218 11 1 1698 1915 785861105 785861320 3.980000e-86 329.0
20 TraesCS2D01G480600 chr2B 92.202 218 15 1 1698 1915 737660027 737660242 1.860000e-79 307.0
21 TraesCS2D01G480600 chr2B 98.077 52 1 0 1913 1964 785861380 785861431 2.040000e-14 91.6
22 TraesCS2D01G480600 chr2B 100.000 38 0 0 2982 3019 59476102 59476139 2.660000e-08 71.3
23 TraesCS2D01G480600 chr7B 93.361 2154 97 21 2700 4826 747106570 747108704 0.000000e+00 3144.0
24 TraesCS2D01G480600 chr7B 96.232 690 23 3 2054 2742 591038309 591037622 0.000000e+00 1127.0
25 TraesCS2D01G480600 chr7B 95.729 398 17 0 1147 1544 744691951 744691554 4.500000e-180 641.0
26 TraesCS2D01G480600 chr7B 96.789 218 7 0 1698 1915 744691415 744691198 1.090000e-96 364.0
27 TraesCS2D01G480600 chr7B 90.213 235 17 3 1913 2144 452815043 452815274 8.670000e-78 302.0
28 TraesCS2D01G480600 chr7B 95.187 187 7 1 1698 1884 278031348 278031532 1.450000e-75 294.0
29 TraesCS2D01G480600 chr7B 90.338 207 11 3 1010 1215 744692156 744691958 4.090000e-66 263.0
30 TraesCS2D01G480600 chr7B 96.528 144 5 0 1541 1684 278031098 278031241 6.890000e-59 239.0
31 TraesCS2D01G480600 chr7B 87.264 212 13 4 4631 4829 694525437 694525227 4.150000e-56 230.0
32 TraesCS2D01G480600 chr7B 94.161 137 8 0 1777 1913 452814845 452814981 5.400000e-50 209.0
33 TraesCS2D01G480600 chr7B 98.438 64 1 0 2866 2929 743565917 743565980 4.360000e-21 113.0
34 TraesCS2D01G480600 chr7B 100.000 55 0 0 1913 1967 744691138 744691084 9.440000e-18 102.0
35 TraesCS2D01G480600 chr7B 86.957 69 9 0 1144 1212 278030090 278030158 1.590000e-10 78.7
36 TraesCS2D01G480600 chr7B 97.619 42 1 0 2982 3023 591037620 591037579 7.400000e-09 73.1
37 TraesCS2D01G480600 chr4D 93.315 1421 64 19 3434 4826 46138719 46137302 0.000000e+00 2069.0
38 TraesCS2D01G480600 chr4D 86.228 501 56 10 4830 5322 155809625 155810120 1.020000e-146 531.0
39 TraesCS2D01G480600 chr4D 86.024 508 54 14 4829 5325 233261957 233262458 3.650000e-146 529.0
40 TraesCS2D01G480600 chr4D 86.544 379 24 14 161 513 406313850 406313473 5.000000e-105 392.0
41 TraesCS2D01G480600 chr4D 93.443 244 12 4 273 513 98307447 98307205 5.070000e-95 359.0
42 TraesCS2D01G480600 chr4D 88.060 134 16 0 1553 1686 105935924 105936057 5.520000e-35 159.0
43 TraesCS2D01G480600 chr4D 85.484 124 13 3 1553 1671 289495202 289495325 2.010000e-24 124.0
44 TraesCS2D01G480600 chr3D 97.249 1127 26 3 2054 3179 588084754 588083632 0.000000e+00 1905.0
45 TraesCS2D01G480600 chr3D 92.897 1084 45 15 3655 4715 588083616 588082542 0.000000e+00 1546.0
46 TraesCS2D01G480600 chr3D 87.992 508 47 10 4829 5325 250005839 250005335 5.940000e-164 588.0
47 TraesCS2D01G480600 chr3D 90.398 427 25 9 502 920 209980099 209980517 1.010000e-151 547.0
48 TraesCS2D01G480600 chr3D 86.815 493 48 14 4829 5310 416068831 416068345 7.850000e-148 534.0
49 TraesCS2D01G480600 chr3D 83.304 569 61 20 983 1532 570096762 570096209 1.330000e-135 494.0
50 TraesCS2D01G480600 chr3D 93.220 236 12 2 1913 2144 184368303 184368068 1.420000e-90 344.0
51 TraesCS2D01G480600 chr3D 86.667 210 11 7 4634 4826 453234532 453234323 3.230000e-52 217.0
52 TraesCS2D01G480600 chr3D 94.245 139 6 1 1777 1915 184368485 184368349 1.500000e-50 211.0
53 TraesCS2D01G480600 chr3D 85.854 205 19 5 1123 1327 91823343 91823537 5.400000e-50 209.0
54 TraesCS2D01G480600 chr3D 93.798 129 7 1 144 271 314523883 314524011 5.440000e-45 193.0
55 TraesCS2D01G480600 chr4B 89.563 1466 82 22 3402 4826 547409641 547408206 0.000000e+00 1794.0
56 TraesCS2D01G480600 chr5D 93.605 1204 68 7 3419 4616 13172561 13171361 0.000000e+00 1788.0
57 TraesCS2D01G480600 chr5D 90.534 1310 67 25 3559 4826 399706708 399705414 0.000000e+00 1679.0
58 TraesCS2D01G480600 chr5D 96.429 392 13 1 2054 2444 442382683 442382292 0.000000e+00 645.0
59 TraesCS2D01G480600 chr5D 87.402 381 18 17 151 502 134608633 134608254 1.380000e-110 411.0
60 TraesCS2D01G480600 chr5D 95.968 124 5 0 2021 2144 431521958 431521835 9.040000e-48 202.0
61 TraesCS2D01G480600 chr5D 88.961 154 13 4 4 155 227811093 227810942 2.530000e-43 187.0
62 TraesCS2D01G480600 chr5D 87.013 154 17 3 4 155 56490169 56490017 2.550000e-38 171.0
63 TraesCS2D01G480600 chr5D 88.189 127 6 4 2444 2570 442380083 442379966 5.560000e-30 143.0
64 TraesCS2D01G480600 chr5D 92.500 80 6 0 858 937 159884771 159884850 1.210000e-21 115.0
65 TraesCS2D01G480600 chr5A 90.099 1313 82 25 3559 4826 288890505 288891814 0.000000e+00 1661.0
66 TraesCS2D01G480600 chr5A 92.424 132 9 1 141 271 257468474 257468605 2.530000e-43 187.0
67 TraesCS2D01G480600 chr7D 97.266 951 24 2 2054 3002 526509996 526510946 0.000000e+00 1611.0
68 TraesCS2D01G480600 chr7D 92.079 303 21 3 3068 3370 14480574 14480873 1.770000e-114 424.0
69 TraesCS2D01G480600 chr7D 86.572 283 10 13 151 406 419275776 419275495 2.430000e-73 287.0
70 TraesCS2D01G480600 chr7D 84.452 283 17 9 151 406 252008297 252008015 2.460000e-63 254.0
71 TraesCS2D01G480600 chr7D 90.299 134 13 0 1553 1686 41262215 41262348 5.480000e-40 176.0
72 TraesCS2D01G480600 chr7D 87.013 154 17 3 4 155 431219864 431219712 2.550000e-38 171.0
73 TraesCS2D01G480600 chr7D 87.248 149 17 2 8 155 365065064 365064917 9.170000e-38 169.0
74 TraesCS2D01G480600 chr7D 100.000 32 0 0 2957 2988 526510945 526510976 5.760000e-05 60.2
75 TraesCS2D01G480600 chr1A 89.539 1281 109 19 3559 4826 145814545 145813277 0.000000e+00 1600.0
76 TraesCS2D01G480600 chr1A 88.889 423 27 5 505 919 401549413 401549003 2.210000e-138 503.0
77 TraesCS2D01G480600 chr1A 85.561 374 26 16 139 485 55059185 55059557 3.030000e-97 366.0
78 TraesCS2D01G480600 chr1A 87.248 149 17 2 8 155 139325939 139325792 9.170000e-38 169.0
79 TraesCS2D01G480600 chr3A 89.709 1273 70 22 3597 4826 678042624 678041370 0.000000e+00 1568.0
80 TraesCS2D01G480600 chr3A 78.406 690 102 32 2713 3385 28575915 28575256 6.420000e-109 405.0
81 TraesCS2D01G480600 chr3A 83.790 438 27 21 4432 4826 298800386 298800822 5.030000e-100 375.0
82 TraesCS2D01G480600 chr3A 87.745 204 19 6 4629 4827 722490960 722490758 3.210000e-57 233.0
83 TraesCS2D01G480600 chr7A 94.135 1023 54 6 3402 4422 56661043 56662061 0.000000e+00 1552.0
84 TraesCS2D01G480600 chr7A 81.490 416 28 23 4418 4786 56719626 56720039 4.030000e-76 296.0
85 TraesCS2D01G480600 chr7A 82.258 310 35 14 4537 4827 576379644 576379336 3.180000e-62 250.0
86 TraesCS2D01G480600 chr7A 82.410 307 33 16 4537 4827 658726674 658726975 1.150000e-61 248.0
87 TraesCS2D01G480600 chr7A 86.986 146 15 3 1 145 199247808 199247950 1.530000e-35 161.0
88 TraesCS2D01G480600 chr6B 89.404 1208 91 17 504 1684 621548591 621549788 0.000000e+00 1487.0
89 TraesCS2D01G480600 chr6B 93.175 337 22 1 505 840 71750115 71750451 1.330000e-135 494.0
90 TraesCS2D01G480600 chr6B 87.915 422 29 7 505 919 421314906 421315312 1.340000e-130 477.0
91 TraesCS2D01G480600 chr6B 95.413 218 8 1 1698 1915 90181311 90181096 3.950000e-91 346.0
92 TraesCS2D01G480600 chr6B 95.804 143 6 0 1542 1684 90181560 90181418 1.150000e-56 231.0
93 TraesCS2D01G480600 chr6B 85.185 216 14 5 4631 4829 268044657 268044443 6.990000e-49 206.0
94 TraesCS2D01G480600 chr6B 95.522 67 3 0 970 1036 90182720 90182654 2.030000e-19 108.0
95 TraesCS2D01G480600 chr6B 95.833 48 2 0 1913 1960 90181036 90180989 1.590000e-10 78.7
96 TraesCS2D01G480600 chr5B 95.501 689 29 2 2056 2742 374237623 374238311 0.000000e+00 1099.0
97 TraesCS2D01G480600 chr5B 88.619 536 44 10 2539 3071 637228178 637228699 2.090000e-178 636.0
98 TraesCS2D01G480600 chr5B 90.299 134 13 0 1553 1686 608316939 608317072 5.480000e-40 176.0
99 TraesCS2D01G480600 chr5B 86.000 150 18 3 8 155 212652167 212652315 1.990000e-34 158.0
100 TraesCS2D01G480600 chr5B 98.438 64 1 0 2866 2929 506237647 506237710 4.360000e-21 113.0
101 TraesCS2D01G480600 chr6A 95.559 653 27 2 2054 2705 590191181 590190530 0.000000e+00 1044.0
102 TraesCS2D01G480600 chr6A 88.164 828 50 19 4043 4826 584692 585515 0.000000e+00 942.0
103 TraesCS2D01G480600 chr6A 92.758 359 23 3 3017 3375 489589287 489589642 2.840000e-142 516.0
104 TraesCS2D01G480600 chr6A 87.383 428 28 11 505 920 574611305 574610892 8.080000e-128 468.0
105 TraesCS2D01G480600 chr6A 86.538 364 33 16 151 502 272073513 272073872 2.330000e-103 387.0
106 TraesCS2D01G480600 chr6A 92.593 243 16 2 273 513 301802796 301802554 1.100000e-91 348.0
107 TraesCS2D01G480600 chr6A 91.701 241 18 2 275 513 195744266 195744026 3.070000e-87 333.0
108 TraesCS2D01G480600 chr6A 87.582 153 17 2 4 155 423837727 423837576 5.480000e-40 176.0
109 TraesCS2D01G480600 chr6A 98.438 64 1 0 856 919 605995212 605995275 4.360000e-21 113.0
110 TraesCS2D01G480600 chr2A 95.406 653 28 2 2054 2705 513877488 513878139 0.000000e+00 1038.0
111 TraesCS2D01G480600 chr2A 95.672 647 26 2 2060 2705 675798505 675797860 0.000000e+00 1038.0
112 TraesCS2D01G480600 chr2A 89.821 560 37 10 987 1545 753613907 753614447 0.000000e+00 701.0
113 TraesCS2D01G480600 chr2A 86.417 508 53 10 4829 5325 187362804 187363306 4.690000e-150 542.0
114 TraesCS2D01G480600 chr2A 86.193 507 56 11 4829 5325 187356276 187356778 2.180000e-148 536.0
115 TraesCS2D01G480600 chr2A 91.601 381 20 3 505 885 28102099 28102467 2.840000e-142 516.0
116 TraesCS2D01G480600 chr2A 86.118 389 26 11 151 513 498914916 498914530 1.390000e-105 394.0
117 TraesCS2D01G480600 chr2A 86.458 384 23 13 148 504 519173353 519173734 1.390000e-105 394.0
118 TraesCS2D01G480600 chr2A 85.340 382 26 12 151 502 396218217 396217836 8.430000e-98 368.0
119 TraesCS2D01G480600 chr2A 82.857 210 19 4 4633 4826 438229979 438229771 7.090000e-39 172.0
120 TraesCS2D01G480600 chr2A 100.000 31 0 0 3365 3395 753614821 753614851 2.070000e-04 58.4
121 TraesCS2D01G480600 chr1D 86.497 511 54 12 4827 5325 88367192 88367699 1.010000e-151 547.0
122 TraesCS2D01G480600 chr1D 86.301 511 55 13 4827 5325 88340737 88341244 4.690000e-150 542.0
123 TraesCS2D01G480600 chr1D 87.339 387 21 14 151 510 119092460 119092845 8.250000e-113 418.0
124 TraesCS2D01G480600 chr1D 96.380 221 8 0 2168 2388 180805363 180805143 1.090000e-96 364.0
125 TraesCS2D01G480600 chr1D 74.830 441 72 33 505 937 37116400 37115991 4.270000e-36 163.0
126 TraesCS2D01G480600 chr1D 86.755 151 15 4 8 155 72930638 72930786 4.270000e-36 163.0
127 TraesCS2D01G480600 chr1D 100.000 29 0 0 1708 1736 298927154 298927182 3.000000e-03 54.7
128 TraesCS2D01G480600 chr4A 94.203 345 18 2 3023 3367 733006841 733006499 4.720000e-145 525.0
129 TraesCS2D01G480600 chr4A 93.913 345 17 3 3023 3367 733140829 733140489 7.910000e-143 518.0
130 TraesCS2D01G480600 chr4A 88.305 419 39 6 505 920 550328786 550328375 1.330000e-135 494.0
131 TraesCS2D01G480600 chr4A 91.810 232 19 0 1913 2144 585048065 585048296 1.850000e-84 324.0
132 TraesCS2D01G480600 chr4A 95.683 139 6 0 1777 1915 642607916 642608054 1.930000e-54 224.0
133 TraesCS2D01G480600 chr4A 90.647 139 12 1 1777 1915 585047869 585048006 3.280000e-42 183.0
134 TraesCS2D01G480600 chr4A 87.248 149 17 2 4679 4826 646068917 646069064 9.170000e-38 169.0
135 TraesCS2D01G480600 chr4A 80.342 234 17 14 1913 2144 642608114 642608320 3.320000e-32 150.0
136 TraesCS2D01G480600 chr6D 94.065 337 18 2 505 840 47074898 47075233 1.320000e-140 510.0
137 TraesCS2D01G480600 chr6D 92.735 234 15 2 273 504 248222523 248222756 2.380000e-88 337.0
138 TraesCS2D01G480600 chr6D 100.000 30 0 0 856 885 47075233 47075262 7.450000e-04 56.5
139 TraesCS2D01G480600 chr1B 93.333 345 14 1 2054 2398 31377752 31377417 7.960000e-138 501.0
140 TraesCS2D01G480600 chr1B 92.969 128 8 1 4700 4826 59102657 59102784 9.110000e-43 185.0
141 TraesCS2D01G480600 chr3B 88.136 236 14 9 1913 2144 644318877 644318652 8.790000e-68 268.0
142 TraesCS2D01G480600 chr3B 86.957 46 6 0 1709 1754 316304247 316304202 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G480600 chr2D 582868051 582873375 5324 False 9834.000000 9834 100.000000 1 5325 1 chr2D.!!$F2 5324
1 TraesCS2D01G480600 chr2D 271471832 271472333 501 False 551.000000 551 86.706000 4829 5325 1 chr2D.!!$F1 496
2 TraesCS2D01G480600 chr2D 621953317 621954058 741 True 391.000000 593 90.393500 987 1684 2 chr2D.!!$R3 697
3 TraesCS2D01G480600 chr2B 719583619 719585737 2118 True 3284.000000 3284 94.533000 2344 4482 1 chr2B.!!$R1 2138
4 TraesCS2D01G480600 chr2B 737640317 737641617 1300 False 737.500000 752 88.756000 505 1684 2 chr2B.!!$F5 1179
5 TraesCS2D01G480600 chr2B 763838909 763839459 550 False 630.000000 630 87.612000 987 1532 1 chr2B.!!$F3 545
6 TraesCS2D01G480600 chr2B 59475420 59476139 719 False 583.650000 1096 97.874000 2064 3019 2 chr2B.!!$F4 955
7 TraesCS2D01G480600 chr2B 719634670 719635513 843 True 546.000000 761 93.563500 1164 1915 2 chr2B.!!$R3 751
8 TraesCS2D01G480600 chr2B 312362997 312365145 2148 True 447.333333 508 93.985333 505 1915 3 chr2B.!!$R2 1410
9 TraesCS2D01G480600 chr2B 785859526 785861431 1905 False 435.400000 833 94.513500 505 1964 4 chr2B.!!$F6 1459
10 TraesCS2D01G480600 chr2B 375202282 375202935 653 False 422.000000 422 78.730000 2713 3379 1 chr2B.!!$F1 666
11 TraesCS2D01G480600 chr7B 747106570 747108704 2134 False 3144.000000 3144 93.361000 2700 4826 1 chr7B.!!$F2 2126
12 TraesCS2D01G480600 chr7B 591037579 591038309 730 True 600.050000 1127 96.925500 2054 3023 2 chr7B.!!$R2 969
13 TraesCS2D01G480600 chr7B 744691084 744692156 1072 True 342.500000 641 95.714000 1010 1967 4 chr7B.!!$R3 957
14 TraesCS2D01G480600 chr7B 278030090 278031532 1442 False 203.900000 294 92.890667 1144 1884 3 chr7B.!!$F3 740
15 TraesCS2D01G480600 chr4D 46137302 46138719 1417 True 2069.000000 2069 93.315000 3434 4826 1 chr4D.!!$R1 1392
16 TraesCS2D01G480600 chr4D 233261957 233262458 501 False 529.000000 529 86.024000 4829 5325 1 chr4D.!!$F3 496
17 TraesCS2D01G480600 chr3D 588082542 588084754 2212 True 1725.500000 1905 95.073000 2054 4715 2 chr3D.!!$R6 2661
18 TraesCS2D01G480600 chr3D 250005335 250005839 504 True 588.000000 588 87.992000 4829 5325 1 chr3D.!!$R1 496
19 TraesCS2D01G480600 chr3D 570096209 570096762 553 True 494.000000 494 83.304000 983 1532 1 chr3D.!!$R4 549
20 TraesCS2D01G480600 chr4B 547408206 547409641 1435 True 1794.000000 1794 89.563000 3402 4826 1 chr4B.!!$R1 1424
21 TraesCS2D01G480600 chr5D 13171361 13172561 1200 True 1788.000000 1788 93.605000 3419 4616 1 chr5D.!!$R1 1197
22 TraesCS2D01G480600 chr5D 399705414 399706708 1294 True 1679.000000 1679 90.534000 3559 4826 1 chr5D.!!$R5 1267
23 TraesCS2D01G480600 chr5D 442379966 442382683 2717 True 394.000000 645 92.309000 2054 2570 2 chr5D.!!$R7 516
24 TraesCS2D01G480600 chr5A 288890505 288891814 1309 False 1661.000000 1661 90.099000 3559 4826 1 chr5A.!!$F2 1267
25 TraesCS2D01G480600 chr7D 526509996 526510976 980 False 835.600000 1611 98.633000 2054 3002 2 chr7D.!!$F3 948
26 TraesCS2D01G480600 chr1A 145813277 145814545 1268 True 1600.000000 1600 89.539000 3559 4826 1 chr1A.!!$R2 1267
27 TraesCS2D01G480600 chr3A 678041370 678042624 1254 True 1568.000000 1568 89.709000 3597 4826 1 chr3A.!!$R2 1229
28 TraesCS2D01G480600 chr3A 28575256 28575915 659 True 405.000000 405 78.406000 2713 3385 1 chr3A.!!$R1 672
29 TraesCS2D01G480600 chr7A 56661043 56662061 1018 False 1552.000000 1552 94.135000 3402 4422 1 chr7A.!!$F1 1020
30 TraesCS2D01G480600 chr6B 621548591 621549788 1197 False 1487.000000 1487 89.404000 504 1684 1 chr6B.!!$F3 1180
31 TraesCS2D01G480600 chr5B 374237623 374238311 688 False 1099.000000 1099 95.501000 2056 2742 1 chr5B.!!$F2 686
32 TraesCS2D01G480600 chr5B 637228178 637228699 521 False 636.000000 636 88.619000 2539 3071 1 chr5B.!!$F5 532
33 TraesCS2D01G480600 chr6A 590190530 590191181 651 True 1044.000000 1044 95.559000 2054 2705 1 chr6A.!!$R5 651
34 TraesCS2D01G480600 chr6A 584692 585515 823 False 942.000000 942 88.164000 4043 4826 1 chr6A.!!$F1 783
35 TraesCS2D01G480600 chr2A 513877488 513878139 651 False 1038.000000 1038 95.406000 2054 2705 1 chr2A.!!$F4 651
36 TraesCS2D01G480600 chr2A 675797860 675798505 645 True 1038.000000 1038 95.672000 2060 2705 1 chr2A.!!$R4 645
37 TraesCS2D01G480600 chr2A 187362804 187363306 502 False 542.000000 542 86.417000 4829 5325 1 chr2A.!!$F3 496
38 TraesCS2D01G480600 chr2A 187356276 187356778 502 False 536.000000 536 86.193000 4829 5325 1 chr2A.!!$F2 496
39 TraesCS2D01G480600 chr2A 753613907 753614851 944 False 379.700000 701 94.910500 987 3395 2 chr2A.!!$F6 2408
40 TraesCS2D01G480600 chr1D 88367192 88367699 507 False 547.000000 547 86.497000 4827 5325 1 chr1D.!!$F3 498
41 TraesCS2D01G480600 chr1D 88340737 88341244 507 False 542.000000 542 86.301000 4827 5325 1 chr1D.!!$F2 498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.034059 ACACTCTGCGGAGGTTTGAG 59.966 55.0 26.07 10.80 43.46 3.02 F
409 410 0.038166 GATTCCTCAGGTGCCCACAA 59.962 55.0 0.00 0.00 0.00 3.33 F
423 424 0.112218 CCACAACCAATCCACCCAGA 59.888 55.0 0.00 0.00 0.00 3.86 F
753 755 0.174389 CTGTAGCGCAGGTCAGATGT 59.826 55.0 11.47 0.00 41.42 3.06 F
951 954 0.460311 GCCGGTGAGTACTAGCACAT 59.540 55.0 14.63 0.00 36.76 3.21 F
1977 4188 0.798771 GCGAGCTTCGTTCGAGTCAT 60.799 55.0 4.32 0.00 42.81 3.06 F
2044 4255 0.666374 AAAAGTAACACGTGCCCAGC 59.334 50.0 17.22 1.67 0.00 4.85 F
2045 4256 1.170290 AAAGTAACACGTGCCCAGCC 61.170 55.0 17.22 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1755 3902 0.508213 GCCAAACGCAATTGCTTGTC 59.492 50.000 26.86 12.58 39.32 3.18 R
2025 4236 0.666374 GCTGGGCACGTGTTACTTTT 59.334 50.000 18.38 0.00 0.00 2.27 R
2026 4237 1.170290 GGCTGGGCACGTGTTACTTT 61.170 55.000 18.38 0.00 0.00 2.66 R
2027 4238 1.599797 GGCTGGGCACGTGTTACTT 60.600 57.895 18.38 0.00 0.00 2.24 R
2028 4239 2.032071 GGCTGGGCACGTGTTACT 59.968 61.111 18.38 0.00 0.00 2.24 R
3675 8157 2.960384 TCAGCATTTGCATTGATAGGGG 59.040 45.455 5.20 0.00 45.16 4.79 R
4004 8489 4.154347 CTCTCAGGCTCGGGGTGC 62.154 72.222 0.00 0.00 0.00 5.01 R
4391 8876 6.932356 TGCCATGCAAATTCAAAACTTTAA 57.068 29.167 0.00 0.00 34.76 1.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.898120 TCCCTAACTCAATCCCAAAAATCA 58.102 37.500 0.00 0.00 0.00 2.57
26 27 6.502138 TCCCTAACTCAATCCCAAAAATCAT 58.498 36.000 0.00 0.00 0.00 2.45
27 28 6.959366 TCCCTAACTCAATCCCAAAAATCATT 59.041 34.615 0.00 0.00 0.00 2.57
28 29 8.119246 TCCCTAACTCAATCCCAAAAATCATTA 58.881 33.333 0.00 0.00 0.00 1.90
29 30 8.757877 CCCTAACTCAATCCCAAAAATCATTAA 58.242 33.333 0.00 0.00 0.00 1.40
35 36 9.546428 CTCAATCCCAAAAATCATTAATAACCC 57.454 33.333 0.00 0.00 0.00 4.11
36 37 9.051259 TCAATCCCAAAAATCATTAATAACCCA 57.949 29.630 0.00 0.00 0.00 4.51
37 38 9.678260 CAATCCCAAAAATCATTAATAACCCAA 57.322 29.630 0.00 0.00 0.00 4.12
38 39 9.679661 AATCCCAAAAATCATTAATAACCCAAC 57.320 29.630 0.00 0.00 0.00 3.77
39 40 8.207350 TCCCAAAAATCATTAATAACCCAACA 57.793 30.769 0.00 0.00 0.00 3.33
40 41 8.660435 TCCCAAAAATCATTAATAACCCAACAA 58.340 29.630 0.00 0.00 0.00 2.83
41 42 8.726068 CCCAAAAATCATTAATAACCCAACAAC 58.274 33.333 0.00 0.00 0.00 3.32
42 43 9.500785 CCAAAAATCATTAATAACCCAACAACT 57.499 29.630 0.00 0.00 0.00 3.16
56 57 8.706322 AACCCAACAACTTCATTAAATAGAGT 57.294 30.769 0.00 0.00 0.00 3.24
57 58 8.110860 ACCCAACAACTTCATTAAATAGAGTG 57.889 34.615 0.00 0.00 0.00 3.51
58 59 7.942341 ACCCAACAACTTCATTAAATAGAGTGA 59.058 33.333 0.00 0.00 0.00 3.41
59 60 8.960591 CCCAACAACTTCATTAAATAGAGTGAT 58.039 33.333 0.00 0.00 0.00 3.06
60 61 9.778993 CCAACAACTTCATTAAATAGAGTGATG 57.221 33.333 0.00 0.00 0.00 3.07
111 112 8.917088 AGATATTCAAAATTGTCCATAACCAGG 58.083 33.333 0.00 0.00 0.00 4.45
112 113 5.736951 TTCAAAATTGTCCATAACCAGGG 57.263 39.130 0.00 0.00 0.00 4.45
113 114 5.004361 TCAAAATTGTCCATAACCAGGGA 57.996 39.130 0.00 0.00 30.39 4.20
123 124 6.126863 TCCATAACCAGGGACATGATATTC 57.873 41.667 0.00 0.00 26.97 1.75
124 125 4.937620 CCATAACCAGGGACATGATATTCG 59.062 45.833 0.00 0.00 0.00 3.34
125 126 5.513094 CCATAACCAGGGACATGATATTCGT 60.513 44.000 0.00 0.00 0.00 3.85
126 127 3.475566 ACCAGGGACATGATATTCGTG 57.524 47.619 0.00 0.00 39.24 4.35
127 128 3.038280 ACCAGGGACATGATATTCGTGA 58.962 45.455 0.00 0.00 36.89 4.35
128 129 3.454447 ACCAGGGACATGATATTCGTGAA 59.546 43.478 0.00 0.00 36.89 3.18
129 130 4.103153 ACCAGGGACATGATATTCGTGAAT 59.897 41.667 0.00 0.22 36.89 2.57
130 131 5.306937 ACCAGGGACATGATATTCGTGAATA 59.693 40.000 0.00 4.88 36.89 1.75
131 132 5.871524 CCAGGGACATGATATTCGTGAATAG 59.128 44.000 0.00 0.00 36.89 1.73
132 133 6.459066 CAGGGACATGATATTCGTGAATAGT 58.541 40.000 0.00 1.30 36.89 2.12
133 134 6.931281 CAGGGACATGATATTCGTGAATAGTT 59.069 38.462 0.00 0.00 36.89 2.24
134 135 7.442364 CAGGGACATGATATTCGTGAATAGTTT 59.558 37.037 0.00 0.00 36.89 2.66
135 136 7.442364 AGGGACATGATATTCGTGAATAGTTTG 59.558 37.037 0.00 7.38 36.89 2.93
136 137 7.226720 GGGACATGATATTCGTGAATAGTTTGT 59.773 37.037 0.00 9.83 36.89 2.83
137 138 9.256477 GGACATGATATTCGTGAATAGTTTGTA 57.744 33.333 0.00 0.00 36.89 2.41
139 140 9.594478 ACATGATATTCGTGAATAGTTTGTACA 57.406 29.630 0.00 0.00 36.89 2.90
140 141 9.849607 CATGATATTCGTGAATAGTTTGTACAC 57.150 33.333 8.18 0.00 35.46 2.90
141 142 9.817809 ATGATATTCGTGAATAGTTTGTACACT 57.182 29.630 8.18 0.00 36.79 3.55
142 143 9.297586 TGATATTCGTGAATAGTTTGTACACTC 57.702 33.333 8.18 0.00 36.79 3.51
143 144 9.517609 GATATTCGTGAATAGTTTGTACACTCT 57.482 33.333 8.18 0.00 36.79 3.24
144 145 7.582435 ATTCGTGAATAGTTTGTACACTCTG 57.418 36.000 0.00 0.00 0.00 3.35
145 146 4.921515 TCGTGAATAGTTTGTACACTCTGC 59.078 41.667 0.00 0.00 0.00 4.26
146 147 4.201494 CGTGAATAGTTTGTACACTCTGCG 60.201 45.833 0.00 0.00 0.00 5.18
147 148 4.091509 GTGAATAGTTTGTACACTCTGCGG 59.908 45.833 0.00 0.00 0.00 5.69
148 149 4.021807 TGAATAGTTTGTACACTCTGCGGA 60.022 41.667 0.00 0.00 0.00 5.54
149 150 2.440539 AGTTTGTACACTCTGCGGAG 57.559 50.000 21.32 21.32 44.62 4.63
150 151 1.000955 AGTTTGTACACTCTGCGGAGG 59.999 52.381 26.07 16.79 43.46 4.30
151 152 1.045407 TTTGTACACTCTGCGGAGGT 58.955 50.000 26.07 21.10 43.46 3.85
152 153 1.045407 TTGTACACTCTGCGGAGGTT 58.955 50.000 26.07 14.53 43.46 3.50
153 154 1.045407 TGTACACTCTGCGGAGGTTT 58.955 50.000 26.07 12.09 43.46 3.27
154 155 1.270094 TGTACACTCTGCGGAGGTTTG 60.270 52.381 26.07 17.29 43.46 2.93
155 156 1.000506 GTACACTCTGCGGAGGTTTGA 59.999 52.381 26.07 4.31 43.46 2.69
156 157 0.034059 ACACTCTGCGGAGGTTTGAG 59.966 55.000 26.07 10.80 43.46 3.02
157 158 0.318441 CACTCTGCGGAGGTTTGAGA 59.682 55.000 26.07 0.00 43.46 3.27
158 159 1.048601 ACTCTGCGGAGGTTTGAGAA 58.951 50.000 26.07 0.00 43.46 2.87
159 160 1.416401 ACTCTGCGGAGGTTTGAGAAA 59.584 47.619 26.07 0.00 43.46 2.52
160 161 1.801178 CTCTGCGGAGGTTTGAGAAAC 59.199 52.381 15.27 0.00 40.65 2.78
161 162 0.512952 CTGCGGAGGTTTGAGAAACG 59.487 55.000 0.00 0.00 42.29 3.60
162 163 0.882927 TGCGGAGGTTTGAGAAACGG 60.883 55.000 0.00 0.00 42.29 4.44
163 164 0.601841 GCGGAGGTTTGAGAAACGGA 60.602 55.000 0.00 0.00 42.29 4.69
164 165 1.944430 GCGGAGGTTTGAGAAACGGAT 60.944 52.381 0.00 0.00 42.29 4.18
165 166 1.732259 CGGAGGTTTGAGAAACGGATG 59.268 52.381 0.00 0.00 42.29 3.51
166 167 2.611971 CGGAGGTTTGAGAAACGGATGA 60.612 50.000 0.00 0.00 42.29 2.92
167 168 3.610911 GGAGGTTTGAGAAACGGATGAT 58.389 45.455 0.00 0.00 42.29 2.45
168 169 3.623510 GGAGGTTTGAGAAACGGATGATC 59.376 47.826 0.00 0.00 42.29 2.92
169 170 3.262420 AGGTTTGAGAAACGGATGATCG 58.738 45.455 0.00 0.00 42.29 3.69
170 171 3.056107 AGGTTTGAGAAACGGATGATCGA 60.056 43.478 0.00 0.00 42.29 3.59
171 172 3.307242 GGTTTGAGAAACGGATGATCGAG 59.693 47.826 0.00 0.00 42.29 4.04
172 173 4.174009 GTTTGAGAAACGGATGATCGAGA 58.826 43.478 0.00 0.00 0.00 4.04
173 174 3.422417 TGAGAAACGGATGATCGAGAC 57.578 47.619 0.00 0.00 0.00 3.36
174 175 2.752903 TGAGAAACGGATGATCGAGACA 59.247 45.455 0.00 0.00 0.00 3.41
175 176 3.109619 GAGAAACGGATGATCGAGACAC 58.890 50.000 0.00 0.00 0.00 3.67
176 177 2.492088 AGAAACGGATGATCGAGACACA 59.508 45.455 0.00 0.00 0.00 3.72
177 178 3.056821 AGAAACGGATGATCGAGACACAA 60.057 43.478 0.00 0.00 0.00 3.33
178 179 3.526931 AACGGATGATCGAGACACAAT 57.473 42.857 0.00 0.00 0.00 2.71
179 180 3.085443 ACGGATGATCGAGACACAATC 57.915 47.619 0.00 0.00 0.00 2.67
180 181 2.047040 CGGATGATCGAGACACAATCG 58.953 52.381 0.00 0.00 41.50 3.34
181 182 2.541794 CGGATGATCGAGACACAATCGT 60.542 50.000 0.00 0.00 40.95 3.73
182 183 3.448686 GGATGATCGAGACACAATCGTT 58.551 45.455 0.00 0.00 40.95 3.85
183 184 3.487574 GGATGATCGAGACACAATCGTTC 59.512 47.826 0.00 0.00 40.95 3.95
184 185 2.876091 TGATCGAGACACAATCGTTCC 58.124 47.619 0.00 0.00 40.95 3.62
185 186 1.846782 GATCGAGACACAATCGTTCCG 59.153 52.381 0.00 0.00 40.95 4.30
186 187 0.876399 TCGAGACACAATCGTTCCGA 59.124 50.000 0.00 0.00 40.95 4.55
187 188 1.267533 TCGAGACACAATCGTTCCGAA 59.732 47.619 0.00 0.00 39.99 4.30
188 189 1.649171 CGAGACACAATCGTTCCGAAG 59.351 52.381 0.00 0.00 39.99 3.79
189 190 2.667448 CGAGACACAATCGTTCCGAAGA 60.667 50.000 0.00 0.00 39.99 2.87
190 191 2.917971 GAGACACAATCGTTCCGAAGAG 59.082 50.000 0.00 0.00 39.99 2.85
191 192 1.993370 GACACAATCGTTCCGAAGAGG 59.007 52.381 0.00 0.00 39.99 3.69
192 193 1.343465 ACACAATCGTTCCGAAGAGGT 59.657 47.619 0.00 0.00 39.99 3.85
193 194 1.993370 CACAATCGTTCCGAAGAGGTC 59.007 52.381 0.00 0.00 39.99 3.85
194 195 1.067071 ACAATCGTTCCGAAGAGGTCC 60.067 52.381 0.00 0.00 39.99 4.46
195 196 0.535797 AATCGTTCCGAAGAGGTCCC 59.464 55.000 0.00 0.00 39.99 4.46
196 197 1.328430 ATCGTTCCGAAGAGGTCCCC 61.328 60.000 0.00 0.00 39.99 4.81
197 198 1.982938 CGTTCCGAAGAGGTCCCCT 60.983 63.158 0.00 0.00 41.99 4.79
198 199 1.542187 CGTTCCGAAGAGGTCCCCTT 61.542 60.000 0.00 0.00 41.99 3.95
199 200 1.565067 GTTCCGAAGAGGTCCCCTTA 58.435 55.000 0.00 0.00 41.99 2.69
200 201 1.904537 GTTCCGAAGAGGTCCCCTTAA 59.095 52.381 0.00 0.00 41.99 1.85
201 202 1.565067 TCCGAAGAGGTCCCCTTAAC 58.435 55.000 0.00 0.00 41.99 2.01
202 203 1.078324 TCCGAAGAGGTCCCCTTAACT 59.922 52.381 0.00 0.00 41.99 2.24
203 204 1.207329 CCGAAGAGGTCCCCTTAACTG 59.793 57.143 0.00 0.00 31.76 3.16
204 205 2.176889 CGAAGAGGTCCCCTTAACTGA 58.823 52.381 0.00 0.00 31.76 3.41
205 206 2.766828 CGAAGAGGTCCCCTTAACTGAT 59.233 50.000 0.00 0.00 31.76 2.90
206 207 3.958798 CGAAGAGGTCCCCTTAACTGATA 59.041 47.826 0.00 0.00 31.76 2.15
207 208 4.038162 CGAAGAGGTCCCCTTAACTGATAG 59.962 50.000 0.00 0.00 31.76 2.08
208 209 4.901785 AGAGGTCCCCTTAACTGATAGA 57.098 45.455 0.00 0.00 31.76 1.98
209 210 5.426325 AGAGGTCCCCTTAACTGATAGAT 57.574 43.478 0.00 0.00 31.76 1.98
210 211 6.547396 AGAGGTCCCCTTAACTGATAGATA 57.453 41.667 0.00 0.00 31.76 1.98
211 212 6.557568 AGAGGTCCCCTTAACTGATAGATAG 58.442 44.000 0.00 0.00 31.76 2.08
212 213 5.656420 AGGTCCCCTTAACTGATAGATAGG 58.344 45.833 0.00 0.00 0.00 2.57
213 214 4.223255 GGTCCCCTTAACTGATAGATAGGC 59.777 50.000 0.00 0.00 0.00 3.93
214 215 4.223255 GTCCCCTTAACTGATAGATAGGCC 59.777 50.000 0.00 0.00 0.00 5.19
215 216 3.195825 CCCCTTAACTGATAGATAGGCCG 59.804 52.174 0.00 0.00 0.00 6.13
216 217 3.195825 CCCTTAACTGATAGATAGGCCGG 59.804 52.174 0.00 0.00 0.00 6.13
217 218 3.833070 CCTTAACTGATAGATAGGCCGGT 59.167 47.826 1.90 0.00 0.00 5.28
218 219 5.014858 CCTTAACTGATAGATAGGCCGGTA 58.985 45.833 1.90 0.00 0.00 4.02
219 220 5.105837 CCTTAACTGATAGATAGGCCGGTAC 60.106 48.000 1.90 0.00 0.00 3.34
220 221 3.520691 ACTGATAGATAGGCCGGTACA 57.479 47.619 1.90 0.00 0.00 2.90
221 222 3.155501 ACTGATAGATAGGCCGGTACAC 58.844 50.000 1.90 0.00 0.00 2.90
222 223 2.492484 CTGATAGATAGGCCGGTACACC 59.508 54.545 1.90 0.00 0.00 4.16
223 224 2.109480 TGATAGATAGGCCGGTACACCT 59.891 50.000 1.90 2.96 38.22 4.00
224 225 3.331591 TGATAGATAGGCCGGTACACCTA 59.668 47.826 1.90 5.57 40.43 3.08
225 226 1.992538 AGATAGGCCGGTACACCTAC 58.007 55.000 1.90 0.89 39.22 3.18
226 227 1.216175 AGATAGGCCGGTACACCTACA 59.784 52.381 1.90 0.00 39.22 2.74
227 228 2.034124 GATAGGCCGGTACACCTACAA 58.966 52.381 1.90 0.00 39.22 2.41
228 229 2.163810 TAGGCCGGTACACCTACAAT 57.836 50.000 1.90 0.00 35.96 2.71
229 230 1.282382 AGGCCGGTACACCTACAATT 58.718 50.000 1.90 0.00 32.29 2.32
230 231 1.208776 AGGCCGGTACACCTACAATTC 59.791 52.381 1.90 0.00 32.29 2.17
231 232 1.660167 GCCGGTACACCTACAATTCC 58.340 55.000 1.90 0.00 0.00 3.01
232 233 1.744798 GCCGGTACACCTACAATTCCC 60.745 57.143 1.90 0.00 0.00 3.97
233 234 1.134310 CCGGTACACCTACAATTCCCC 60.134 57.143 0.00 0.00 0.00 4.81
234 235 1.835531 CGGTACACCTACAATTCCCCT 59.164 52.381 0.00 0.00 0.00 4.79
235 236 3.033184 CGGTACACCTACAATTCCCCTA 58.967 50.000 0.00 0.00 0.00 3.53
236 237 3.181472 CGGTACACCTACAATTCCCCTAC 60.181 52.174 0.00 0.00 0.00 3.18
237 238 3.776417 GGTACACCTACAATTCCCCTACA 59.224 47.826 0.00 0.00 0.00 2.74
238 239 4.411212 GGTACACCTACAATTCCCCTACAT 59.589 45.833 0.00 0.00 0.00 2.29
239 240 4.772886 ACACCTACAATTCCCCTACATC 57.227 45.455 0.00 0.00 0.00 3.06
240 241 4.371681 ACACCTACAATTCCCCTACATCT 58.628 43.478 0.00 0.00 0.00 2.90
241 242 4.164221 ACACCTACAATTCCCCTACATCTG 59.836 45.833 0.00 0.00 0.00 2.90
242 243 3.136626 ACCTACAATTCCCCTACATCTGC 59.863 47.826 0.00 0.00 0.00 4.26
243 244 3.392616 CCTACAATTCCCCTACATCTGCT 59.607 47.826 0.00 0.00 0.00 4.24
244 245 4.593206 CCTACAATTCCCCTACATCTGCTA 59.407 45.833 0.00 0.00 0.00 3.49
245 246 4.696479 ACAATTCCCCTACATCTGCTAG 57.304 45.455 0.00 0.00 0.00 3.42
246 247 3.181450 ACAATTCCCCTACATCTGCTAGC 60.181 47.826 8.10 8.10 0.00 3.42
247 248 1.424638 TTCCCCTACATCTGCTAGCC 58.575 55.000 13.29 0.00 0.00 3.93
248 249 0.563173 TCCCCTACATCTGCTAGCCT 59.437 55.000 13.29 0.00 0.00 4.58
249 250 1.787058 TCCCCTACATCTGCTAGCCTA 59.213 52.381 13.29 0.00 0.00 3.93
250 251 2.383683 TCCCCTACATCTGCTAGCCTAT 59.616 50.000 13.29 2.37 0.00 2.57
251 252 2.763448 CCCCTACATCTGCTAGCCTATC 59.237 54.545 13.29 0.00 0.00 2.08
252 253 3.435275 CCCTACATCTGCTAGCCTATCA 58.565 50.000 13.29 0.00 0.00 2.15
253 254 4.029520 CCCTACATCTGCTAGCCTATCAT 58.970 47.826 13.29 0.00 0.00 2.45
254 255 4.141981 CCCTACATCTGCTAGCCTATCATG 60.142 50.000 13.29 9.24 0.00 3.07
255 256 3.977134 ACATCTGCTAGCCTATCATGG 57.023 47.619 13.29 0.00 0.00 3.66
256 257 3.514539 ACATCTGCTAGCCTATCATGGA 58.485 45.455 13.29 0.00 0.00 3.41
257 258 3.906218 ACATCTGCTAGCCTATCATGGAA 59.094 43.478 13.29 0.00 0.00 3.53
258 259 4.349048 ACATCTGCTAGCCTATCATGGAAA 59.651 41.667 13.29 0.00 0.00 3.13
259 260 4.613925 TCTGCTAGCCTATCATGGAAAG 57.386 45.455 13.29 0.00 0.00 2.62
260 261 3.326006 TCTGCTAGCCTATCATGGAAAGG 59.674 47.826 13.29 0.00 0.00 3.11
261 262 3.048600 TGCTAGCCTATCATGGAAAGGT 58.951 45.455 13.29 0.00 32.67 3.50
262 263 3.459598 TGCTAGCCTATCATGGAAAGGTT 59.540 43.478 13.29 7.00 32.67 3.50
263 264 4.068599 GCTAGCCTATCATGGAAAGGTTC 58.931 47.826 2.29 0.00 32.67 3.62
285 286 2.502213 CACAATATGGCATGTGGCTG 57.498 50.000 10.98 1.36 42.46 4.85
286 287 0.748450 ACAATATGGCATGTGGCTGC 59.252 50.000 10.98 0.00 44.01 5.25
287 288 0.747852 CAATATGGCATGTGGCTGCA 59.252 50.000 10.98 0.00 44.12 4.41
288 289 1.343142 CAATATGGCATGTGGCTGCAT 59.657 47.619 10.98 0.00 44.12 3.96
289 290 2.559231 CAATATGGCATGTGGCTGCATA 59.441 45.455 10.98 0.00 44.12 3.14
290 291 1.608055 TATGGCATGTGGCTGCATAC 58.392 50.000 10.98 0.24 44.12 2.39
291 292 1.449726 ATGGCATGTGGCTGCATACG 61.450 55.000 0.00 0.00 44.12 3.06
292 293 1.819208 GGCATGTGGCTGCATACGA 60.819 57.895 0.50 0.00 44.12 3.43
293 294 1.375853 GGCATGTGGCTGCATACGAA 61.376 55.000 0.50 0.00 44.12 3.85
294 295 0.451383 GCATGTGGCTGCATACGAAA 59.549 50.000 0.50 0.00 41.87 3.46
295 296 1.532505 GCATGTGGCTGCATACGAAAG 60.533 52.381 0.50 0.00 41.87 2.62
296 297 4.080526 GCATGTGGCTGCATACGAAAGT 62.081 50.000 0.50 0.00 44.39 2.66
297 298 1.890876 TGTGGCTGCATACGAAAGTT 58.109 45.000 0.50 0.00 46.40 2.66
298 299 2.226330 TGTGGCTGCATACGAAAGTTT 58.774 42.857 0.50 0.00 46.40 2.66
299 300 2.225491 TGTGGCTGCATACGAAAGTTTC 59.775 45.455 5.47 5.47 46.40 2.78
300 301 2.484264 GTGGCTGCATACGAAAGTTTCT 59.516 45.455 13.56 3.86 46.40 2.52
301 302 3.682858 GTGGCTGCATACGAAAGTTTCTA 59.317 43.478 13.56 5.80 46.40 2.10
302 303 3.932710 TGGCTGCATACGAAAGTTTCTAG 59.067 43.478 13.56 1.84 46.40 2.43
303 304 3.242446 GGCTGCATACGAAAGTTTCTAGC 60.242 47.826 13.56 11.41 46.40 3.42
304 305 3.370978 GCTGCATACGAAAGTTTCTAGCA 59.629 43.478 13.56 14.69 46.40 3.49
305 306 4.034510 GCTGCATACGAAAGTTTCTAGCAT 59.965 41.667 13.56 0.00 46.40 3.79
306 307 5.469373 TGCATACGAAAGTTTCTAGCATG 57.531 39.130 13.56 11.09 46.40 4.06
307 308 5.175127 TGCATACGAAAGTTTCTAGCATGA 58.825 37.500 13.56 1.09 46.40 3.07
308 309 5.641636 TGCATACGAAAGTTTCTAGCATGAA 59.358 36.000 13.56 3.77 46.40 2.57
309 310 6.316140 TGCATACGAAAGTTTCTAGCATGAAT 59.684 34.615 13.56 0.00 46.40 2.57
310 311 7.494298 TGCATACGAAAGTTTCTAGCATGAATA 59.506 33.333 13.56 0.00 46.40 1.75
311 312 8.335356 GCATACGAAAGTTTCTAGCATGAATAA 58.665 33.333 13.56 0.00 46.40 1.40
314 315 8.723942 ACGAAAGTTTCTAGCATGAATAATCT 57.276 30.769 13.56 0.00 46.40 2.40
315 316 9.167311 ACGAAAGTTTCTAGCATGAATAATCTT 57.833 29.630 13.56 0.00 46.40 2.40
323 324 9.896645 TTCTAGCATGAATAATCTTATGATCCC 57.103 33.333 0.00 0.00 31.51 3.85
324 325 9.276791 TCTAGCATGAATAATCTTATGATCCCT 57.723 33.333 0.00 0.00 31.51 4.20
325 326 9.902684 CTAGCATGAATAATCTTATGATCCCTT 57.097 33.333 0.00 0.00 31.51 3.95
331 332 9.520515 TGAATAATCTTATGATCCCTTTAAGCC 57.479 33.333 0.00 0.00 31.51 4.35
332 333 9.746457 GAATAATCTTATGATCCCTTTAAGCCT 57.254 33.333 0.00 0.00 31.51 4.58
333 334 9.525826 AATAATCTTATGATCCCTTTAAGCCTG 57.474 33.333 0.00 0.00 31.51 4.85
334 335 5.310409 TCTTATGATCCCTTTAAGCCTGG 57.690 43.478 0.00 0.00 0.00 4.45
335 336 4.104738 TCTTATGATCCCTTTAAGCCTGGG 59.895 45.833 0.00 0.00 42.20 4.45
336 337 1.681229 TGATCCCTTTAAGCCTGGGT 58.319 50.000 0.00 0.00 41.58 4.51
337 338 1.284785 TGATCCCTTTAAGCCTGGGTG 59.715 52.381 0.00 0.00 41.58 4.61
338 339 0.631212 ATCCCTTTAAGCCTGGGTGG 59.369 55.000 0.00 0.00 41.58 4.61
348 349 3.426903 CCTGGGTGGCATTCCATAG 57.573 57.895 11.95 4.84 45.62 2.23
349 350 0.178981 CCTGGGTGGCATTCCATAGG 60.179 60.000 11.95 7.42 45.62 2.57
350 351 0.846015 CTGGGTGGCATTCCATAGGA 59.154 55.000 11.95 0.00 45.62 2.94
351 352 1.426598 CTGGGTGGCATTCCATAGGAT 59.573 52.381 11.95 0.00 45.62 3.24
352 353 1.145531 TGGGTGGCATTCCATAGGATG 59.854 52.381 8.21 0.00 45.62 3.51
353 354 1.425066 GGGTGGCATTCCATAGGATGA 59.575 52.381 0.00 0.00 45.62 2.92
354 355 2.042162 GGGTGGCATTCCATAGGATGAT 59.958 50.000 0.00 0.00 45.62 2.45
355 356 3.350833 GGTGGCATTCCATAGGATGATC 58.649 50.000 0.00 0.00 45.62 2.92
356 357 3.245016 GGTGGCATTCCATAGGATGATCA 60.245 47.826 0.00 0.00 45.62 2.92
357 358 3.755378 GTGGCATTCCATAGGATGATCAC 59.245 47.826 0.00 0.00 45.62 3.06
358 359 3.395273 TGGCATTCCATAGGATGATCACA 59.605 43.478 0.00 0.00 37.47 3.58
359 360 3.755378 GGCATTCCATAGGATGATCACAC 59.245 47.826 0.00 0.00 0.00 3.82
360 361 3.434641 GCATTCCATAGGATGATCACACG 59.565 47.826 0.00 0.00 0.00 4.49
361 362 3.751479 TTCCATAGGATGATCACACGG 57.249 47.619 0.00 0.00 0.00 4.94
362 363 1.970640 TCCATAGGATGATCACACGGG 59.029 52.381 0.00 0.00 0.00 5.28
363 364 1.694150 CCATAGGATGATCACACGGGT 59.306 52.381 0.00 0.00 0.00 5.28
364 365 2.897326 CCATAGGATGATCACACGGGTA 59.103 50.000 0.00 0.00 0.00 3.69
365 366 3.306088 CCATAGGATGATCACACGGGTAC 60.306 52.174 0.00 0.00 0.00 3.34
379 380 3.360296 GGTACCCGGGATCTCCTAG 57.640 63.158 32.02 0.00 35.95 3.02
380 381 0.251698 GGTACCCGGGATCTCCTAGG 60.252 65.000 32.02 0.82 35.95 3.02
381 382 0.776176 GTACCCGGGATCTCCTAGGA 59.224 60.000 32.02 11.98 36.41 2.94
382 383 0.776176 TACCCGGGATCTCCTAGGAC 59.224 60.000 32.02 0.00 36.41 3.85
383 384 1.294426 ACCCGGGATCTCCTAGGACA 61.294 60.000 32.02 0.00 36.41 4.02
384 385 0.105658 CCCGGGATCTCCTAGGACAA 60.106 60.000 18.48 0.00 36.41 3.18
385 386 1.041437 CCGGGATCTCCTAGGACAAC 58.959 60.000 7.62 0.00 36.41 3.32
386 387 1.688311 CCGGGATCTCCTAGGACAACA 60.688 57.143 7.62 0.00 36.41 3.33
387 388 1.409427 CGGGATCTCCTAGGACAACAC 59.591 57.143 7.62 0.00 35.95 3.32
388 389 2.753247 GGGATCTCCTAGGACAACACT 58.247 52.381 7.62 0.00 35.95 3.55
389 390 2.432510 GGGATCTCCTAGGACAACACTG 59.567 54.545 7.62 0.00 35.95 3.66
390 391 2.432510 GGATCTCCTAGGACAACACTGG 59.567 54.545 7.62 0.00 0.00 4.00
391 392 2.992847 TCTCCTAGGACAACACTGGA 57.007 50.000 7.62 0.00 0.00 3.86
392 393 3.474798 TCTCCTAGGACAACACTGGAT 57.525 47.619 7.62 0.00 0.00 3.41
393 394 3.791320 TCTCCTAGGACAACACTGGATT 58.209 45.455 7.62 0.00 0.00 3.01
394 395 3.769844 TCTCCTAGGACAACACTGGATTC 59.230 47.826 7.62 0.00 0.00 2.52
395 396 2.838202 TCCTAGGACAACACTGGATTCC 59.162 50.000 7.62 0.00 0.00 3.01
396 397 2.840651 CCTAGGACAACACTGGATTCCT 59.159 50.000 1.05 0.00 40.01 3.36
397 398 3.118592 CCTAGGACAACACTGGATTCCTC 60.119 52.174 1.05 0.00 37.82 3.71
398 399 2.338809 AGGACAACACTGGATTCCTCA 58.661 47.619 3.95 0.00 30.40 3.86
399 400 2.304180 AGGACAACACTGGATTCCTCAG 59.696 50.000 3.95 0.00 30.40 3.35
400 401 2.616510 GGACAACACTGGATTCCTCAGG 60.617 54.545 3.95 0.00 36.62 3.86
401 402 2.039084 GACAACACTGGATTCCTCAGGT 59.961 50.000 3.95 0.00 36.62 4.00
402 403 2.224621 ACAACACTGGATTCCTCAGGTG 60.225 50.000 3.95 9.88 36.62 4.00
403 404 0.326264 ACACTGGATTCCTCAGGTGC 59.674 55.000 3.95 0.00 36.62 5.01
404 405 0.393537 CACTGGATTCCTCAGGTGCC 60.394 60.000 3.95 0.00 36.62 5.01
405 406 1.225704 CTGGATTCCTCAGGTGCCC 59.774 63.158 3.95 0.00 0.00 5.36
406 407 1.541118 TGGATTCCTCAGGTGCCCA 60.541 57.895 3.95 0.00 0.00 5.36
407 408 1.077429 GGATTCCTCAGGTGCCCAC 60.077 63.158 0.00 0.00 0.00 4.61
408 409 1.685224 GATTCCTCAGGTGCCCACA 59.315 57.895 0.00 0.00 0.00 4.17
409 410 0.038166 GATTCCTCAGGTGCCCACAA 59.962 55.000 0.00 0.00 0.00 3.33
410 411 0.251341 ATTCCTCAGGTGCCCACAAC 60.251 55.000 0.00 0.00 0.00 3.32
411 412 2.282462 CCTCAGGTGCCCACAACC 60.282 66.667 0.40 0.00 32.04 3.77
412 413 2.515398 CTCAGGTGCCCACAACCA 59.485 61.111 0.40 0.00 32.04 3.67
413 414 1.152777 CTCAGGTGCCCACAACCAA 60.153 57.895 0.40 0.00 32.04 3.67
414 415 0.540365 CTCAGGTGCCCACAACCAAT 60.540 55.000 0.40 0.00 32.04 3.16
415 416 0.539438 TCAGGTGCCCACAACCAATC 60.539 55.000 0.40 0.00 32.04 2.67
416 417 1.228862 AGGTGCCCACAACCAATCC 60.229 57.895 0.40 0.00 32.04 3.01
417 418 1.532794 GGTGCCCACAACCAATCCA 60.533 57.895 0.40 0.00 0.00 3.41
418 419 1.665442 GTGCCCACAACCAATCCAC 59.335 57.895 0.00 0.00 0.00 4.02
419 420 1.532794 TGCCCACAACCAATCCACC 60.533 57.895 0.00 0.00 0.00 4.61
420 421 2.282783 GCCCACAACCAATCCACCC 61.283 63.158 0.00 0.00 0.00 4.61
421 422 1.154921 CCCACAACCAATCCACCCA 59.845 57.895 0.00 0.00 0.00 4.51
422 423 0.899717 CCCACAACCAATCCACCCAG 60.900 60.000 0.00 0.00 0.00 4.45
423 424 0.112218 CCACAACCAATCCACCCAGA 59.888 55.000 0.00 0.00 0.00 3.86
424 425 1.272648 CCACAACCAATCCACCCAGAT 60.273 52.381 0.00 0.00 0.00 2.90
425 426 1.820519 CACAACCAATCCACCCAGATG 59.179 52.381 0.00 0.00 0.00 2.90
426 427 1.428912 ACAACCAATCCACCCAGATGT 59.571 47.619 0.00 0.00 0.00 3.06
427 428 1.820519 CAACCAATCCACCCAGATGTG 59.179 52.381 0.00 0.00 35.98 3.21
428 429 1.075601 ACCAATCCACCCAGATGTGT 58.924 50.000 0.00 0.00 34.35 3.72
429 430 2.274542 ACCAATCCACCCAGATGTGTA 58.725 47.619 0.00 0.00 34.35 2.90
430 431 2.852449 ACCAATCCACCCAGATGTGTAT 59.148 45.455 0.00 0.00 34.35 2.29
431 432 3.269381 ACCAATCCACCCAGATGTGTATT 59.731 43.478 0.00 0.00 34.35 1.89
432 433 4.476846 ACCAATCCACCCAGATGTGTATTA 59.523 41.667 0.00 0.00 34.35 0.98
433 434 5.044476 ACCAATCCACCCAGATGTGTATTAA 60.044 40.000 0.00 0.00 34.35 1.40
434 435 5.890985 CCAATCCACCCAGATGTGTATTAAA 59.109 40.000 0.00 0.00 34.35 1.52
435 436 6.379703 CCAATCCACCCAGATGTGTATTAAAA 59.620 38.462 0.00 0.00 34.35 1.52
436 437 7.069826 CCAATCCACCCAGATGTGTATTAAAAT 59.930 37.037 0.00 0.00 34.35 1.82
437 438 9.130661 CAATCCACCCAGATGTGTATTAAAATA 57.869 33.333 0.00 0.00 34.35 1.40
438 439 8.924511 ATCCACCCAGATGTGTATTAAAATAG 57.075 34.615 0.00 0.00 34.35 1.73
439 440 6.770785 TCCACCCAGATGTGTATTAAAATAGC 59.229 38.462 0.00 0.00 34.35 2.97
440 441 6.016276 CCACCCAGATGTGTATTAAAATAGCC 60.016 42.308 0.00 0.00 34.35 3.93
441 442 6.545666 CACCCAGATGTGTATTAAAATAGCCA 59.454 38.462 0.00 0.00 0.00 4.75
442 443 6.546034 ACCCAGATGTGTATTAAAATAGCCAC 59.454 38.462 0.00 0.00 0.00 5.01
443 444 6.016276 CCCAGATGTGTATTAAAATAGCCACC 60.016 42.308 0.00 0.00 0.00 4.61
444 445 6.772716 CCAGATGTGTATTAAAATAGCCACCT 59.227 38.462 0.00 0.00 0.00 4.00
445 446 7.285401 CCAGATGTGTATTAAAATAGCCACCTT 59.715 37.037 0.00 0.00 0.00 3.50
446 447 9.337396 CAGATGTGTATTAAAATAGCCACCTTA 57.663 33.333 0.00 0.00 0.00 2.69
447 448 9.914834 AGATGTGTATTAAAATAGCCACCTTAA 57.085 29.630 0.00 0.00 0.00 1.85
449 450 9.695155 ATGTGTATTAAAATAGCCACCTTAAGT 57.305 29.630 0.97 0.00 0.00 2.24
450 451 9.523168 TGTGTATTAAAATAGCCACCTTAAGTT 57.477 29.630 0.97 0.00 0.00 2.66
454 455 5.995565 AAAATAGCCACCTTAAGTTTCCC 57.004 39.130 0.97 0.00 0.00 3.97
455 456 4.948062 AATAGCCACCTTAAGTTTCCCT 57.052 40.909 0.97 0.00 0.00 4.20
456 457 4.948062 ATAGCCACCTTAAGTTTCCCTT 57.052 40.909 0.97 0.00 37.17 3.95
457 458 6.397217 AATAGCCACCTTAAGTTTCCCTTA 57.603 37.500 0.97 0.00 34.46 2.69
458 459 4.302559 AGCCACCTTAAGTTTCCCTTAG 57.697 45.455 0.97 0.00 36.98 2.18
459 460 3.656264 AGCCACCTTAAGTTTCCCTTAGT 59.344 43.478 0.97 0.00 36.98 2.24
460 461 4.105858 AGCCACCTTAAGTTTCCCTTAGTT 59.894 41.667 0.97 0.00 36.98 2.24
461 462 5.311385 AGCCACCTTAAGTTTCCCTTAGTTA 59.689 40.000 0.97 0.00 36.98 2.24
462 463 6.005823 GCCACCTTAAGTTTCCCTTAGTTAA 58.994 40.000 0.97 0.00 36.98 2.01
463 464 6.491062 GCCACCTTAAGTTTCCCTTAGTTAAA 59.509 38.462 0.97 0.00 36.98 1.52
464 465 7.177921 GCCACCTTAAGTTTCCCTTAGTTAAAT 59.822 37.037 0.97 0.00 36.98 1.40
465 466 9.085645 CCACCTTAAGTTTCCCTTAGTTAAATT 57.914 33.333 0.97 0.00 36.98 1.82
472 473 8.999220 AGTTTCCCTTAGTTAAATTACTCTCG 57.001 34.615 0.00 0.00 0.00 4.04
473 474 7.548427 AGTTTCCCTTAGTTAAATTACTCTCGC 59.452 37.037 0.00 0.00 0.00 5.03
474 475 6.534475 TCCCTTAGTTAAATTACTCTCGCA 57.466 37.500 0.00 0.00 0.00 5.10
475 476 6.938507 TCCCTTAGTTAAATTACTCTCGCAA 58.061 36.000 0.00 0.00 0.00 4.85
476 477 6.815142 TCCCTTAGTTAAATTACTCTCGCAAC 59.185 38.462 0.00 0.00 0.00 4.17
477 478 6.817140 CCCTTAGTTAAATTACTCTCGCAACT 59.183 38.462 0.00 0.00 0.00 3.16
478 479 7.333672 CCCTTAGTTAAATTACTCTCGCAACTT 59.666 37.037 0.00 0.00 0.00 2.66
479 480 8.718734 CCTTAGTTAAATTACTCTCGCAACTTT 58.281 33.333 0.00 0.00 0.00 2.66
480 481 9.742552 CTTAGTTAAATTACTCTCGCAACTTTC 57.257 33.333 0.00 0.00 0.00 2.62
481 482 7.724305 AGTTAAATTACTCTCGCAACTTTCA 57.276 32.000 0.00 0.00 0.00 2.69
482 483 8.324163 AGTTAAATTACTCTCGCAACTTTCAT 57.676 30.769 0.00 0.00 0.00 2.57
483 484 8.230486 AGTTAAATTACTCTCGCAACTTTCATG 58.770 33.333 0.00 0.00 0.00 3.07
484 485 6.801539 AAATTACTCTCGCAACTTTCATGA 57.198 33.333 0.00 0.00 0.00 3.07
485 486 6.992063 AATTACTCTCGCAACTTTCATGAT 57.008 33.333 0.00 0.00 0.00 2.45
486 487 6.595772 ATTACTCTCGCAACTTTCATGATC 57.404 37.500 0.00 0.00 0.00 2.92
487 488 3.265791 ACTCTCGCAACTTTCATGATCC 58.734 45.455 0.00 0.00 0.00 3.36
488 489 3.055530 ACTCTCGCAACTTTCATGATCCT 60.056 43.478 0.00 0.00 0.00 3.24
489 490 3.525537 TCTCGCAACTTTCATGATCCTC 58.474 45.455 0.00 0.00 0.00 3.71
490 491 3.055891 TCTCGCAACTTTCATGATCCTCA 60.056 43.478 0.00 0.00 0.00 3.86
491 492 3.002791 TCGCAACTTTCATGATCCTCAC 58.997 45.455 0.00 0.00 0.00 3.51
492 493 2.743664 CGCAACTTTCATGATCCTCACA 59.256 45.455 0.00 0.00 0.00 3.58
493 494 3.189080 CGCAACTTTCATGATCCTCACAA 59.811 43.478 0.00 0.00 0.00 3.33
494 495 4.320421 CGCAACTTTCATGATCCTCACAAA 60.320 41.667 0.00 0.00 0.00 2.83
495 496 4.919754 GCAACTTTCATGATCCTCACAAAC 59.080 41.667 0.00 0.00 0.00 2.93
496 497 5.464168 CAACTTTCATGATCCTCACAAACC 58.536 41.667 0.00 0.00 0.00 3.27
497 498 4.728772 ACTTTCATGATCCTCACAAACCA 58.271 39.130 0.00 0.00 0.00 3.67
498 499 5.139727 ACTTTCATGATCCTCACAAACCAA 58.860 37.500 0.00 0.00 0.00 3.67
499 500 5.776716 ACTTTCATGATCCTCACAAACCAAT 59.223 36.000 0.00 0.00 0.00 3.16
500 501 5.902613 TTCATGATCCTCACAAACCAATC 57.097 39.130 0.00 0.00 0.00 2.67
501 502 4.272489 TCATGATCCTCACAAACCAATCC 58.728 43.478 0.00 0.00 0.00 3.01
502 503 3.085952 TGATCCTCACAAACCAATCCC 57.914 47.619 0.00 0.00 0.00 3.85
514 515 1.654997 ACCAATCCCCCACTACTAGGA 59.345 52.381 0.00 0.00 0.00 2.94
531 532 8.258708 ACTACTAGGAAAAAGCTTATACACAGG 58.741 37.037 0.00 0.00 0.00 4.00
609 610 3.135348 GGGTTTTTACCCCTCGCTACTAT 59.865 47.826 1.75 0.00 44.18 2.12
667 668 4.808364 CGTTACTACTAAGCGGTCTCTACT 59.192 45.833 0.00 0.00 0.00 2.57
672 673 1.746220 CTAAGCGGTCTCTACTGTGCT 59.254 52.381 0.00 0.00 34.20 4.40
698 700 2.632996 GGGACATGCCATAGTAGTAGCA 59.367 50.000 8.20 0.00 40.00 3.49
701 703 4.202264 GGACATGCCATAGTAGTAGCAAGT 60.202 45.833 0.00 0.78 39.60 3.16
753 755 0.174389 CTGTAGCGCAGGTCAGATGT 59.826 55.000 11.47 0.00 41.42 3.06
785 787 3.403322 AGTATATTCCCACACCACCCAT 58.597 45.455 0.00 0.00 0.00 4.00
840 843 3.428862 CCCACCACTGTTTGTCTCAAAAC 60.429 47.826 0.00 0.00 39.90 2.43
951 954 0.460311 GCCGGTGAGTACTAGCACAT 59.540 55.000 14.63 0.00 36.76 3.21
1184 1525 1.984570 CTCTGGAGGCGGAGGAACA 60.985 63.158 0.00 0.00 0.00 3.18
1532 3330 3.684788 CCAAAATCGGAGTAGGTTCAGTG 59.315 47.826 0.00 0.00 0.00 3.66
1686 3740 9.267084 GATTAATCTTTGGGAGATGTTAGAGTC 57.733 37.037 8.27 0.00 44.41 3.36
1687 3741 6.882768 AATCTTTGGGAGATGTTAGAGTCT 57.117 37.500 0.00 0.00 44.41 3.24
1690 3744 6.253758 TCTTTGGGAGATGTTAGAGTCTGTA 58.746 40.000 1.86 0.00 0.00 2.74
1691 3745 6.378564 TCTTTGGGAGATGTTAGAGTCTGTAG 59.621 42.308 1.86 0.00 0.00 2.74
1692 3746 5.194473 TGGGAGATGTTAGAGTCTGTAGT 57.806 43.478 1.86 0.00 0.00 2.73
1693 3747 5.580998 TGGGAGATGTTAGAGTCTGTAGTT 58.419 41.667 1.86 0.00 0.00 2.24
1694 3748 6.017192 TGGGAGATGTTAGAGTCTGTAGTTT 58.983 40.000 1.86 0.00 0.00 2.66
1695 3749 6.497259 TGGGAGATGTTAGAGTCTGTAGTTTT 59.503 38.462 1.86 0.00 0.00 2.43
1803 3952 6.318900 AGACTGTAGTTTTTCTCTGTTTTGGG 59.681 38.462 0.00 0.00 0.00 4.12
1967 4178 1.978712 TACTCCACGAGCGAGCTTCG 61.979 60.000 4.77 4.77 43.89 3.79
1968 4179 3.329688 CTCCACGAGCGAGCTTCGT 62.330 63.158 6.12 6.12 42.81 3.85
1969 4180 2.430921 CCACGAGCGAGCTTCGTT 60.431 61.111 9.16 2.10 42.81 3.85
1970 4181 2.437343 CCACGAGCGAGCTTCGTTC 61.437 63.158 9.16 10.05 44.79 3.95
1973 4184 3.669223 GAGCGAGCTTCGTTCGAG 58.331 61.111 0.00 0.00 40.03 4.04
1974 4185 1.154188 GAGCGAGCTTCGTTCGAGT 60.154 57.895 0.00 0.00 40.03 4.18
1975 4186 1.129301 GAGCGAGCTTCGTTCGAGTC 61.129 60.000 0.00 0.00 40.03 3.36
1976 4187 1.442184 GCGAGCTTCGTTCGAGTCA 60.442 57.895 4.32 0.00 42.81 3.41
1977 4188 0.798771 GCGAGCTTCGTTCGAGTCAT 60.799 55.000 4.32 0.00 42.81 3.06
1978 4189 0.910513 CGAGCTTCGTTCGAGTCATG 59.089 55.000 0.00 0.00 38.48 3.07
1979 4190 1.729472 CGAGCTTCGTTCGAGTCATGT 60.729 52.381 0.00 0.00 38.48 3.21
1980 4191 1.651138 GAGCTTCGTTCGAGTCATGTG 59.349 52.381 0.00 0.00 0.00 3.21
1981 4192 1.000163 AGCTTCGTTCGAGTCATGTGT 60.000 47.619 0.00 0.00 0.00 3.72
1982 4193 2.228103 AGCTTCGTTCGAGTCATGTGTA 59.772 45.455 0.00 0.00 0.00 2.90
1983 4194 2.984471 GCTTCGTTCGAGTCATGTGTAA 59.016 45.455 0.00 0.00 0.00 2.41
1984 4195 3.612860 GCTTCGTTCGAGTCATGTGTAAT 59.387 43.478 0.00 0.00 0.00 1.89
1985 4196 4.490959 GCTTCGTTCGAGTCATGTGTAATG 60.491 45.833 0.00 0.00 0.00 1.90
1986 4197 3.507786 TCGTTCGAGTCATGTGTAATGG 58.492 45.455 0.00 0.00 0.00 3.16
1987 4198 2.603110 CGTTCGAGTCATGTGTAATGGG 59.397 50.000 0.00 0.00 0.00 4.00
1988 4199 3.596214 GTTCGAGTCATGTGTAATGGGT 58.404 45.455 0.00 0.00 0.00 4.51
1989 4200 4.675933 CGTTCGAGTCATGTGTAATGGGTA 60.676 45.833 0.00 0.00 0.00 3.69
1990 4201 4.649088 TCGAGTCATGTGTAATGGGTAG 57.351 45.455 0.00 0.00 0.00 3.18
1991 4202 4.274978 TCGAGTCATGTGTAATGGGTAGA 58.725 43.478 0.00 0.00 0.00 2.59
1992 4203 4.097437 TCGAGTCATGTGTAATGGGTAGAC 59.903 45.833 0.00 0.00 0.00 2.59
1993 4204 4.142249 CGAGTCATGTGTAATGGGTAGACA 60.142 45.833 0.00 0.00 40.05 3.41
1994 4205 5.623596 CGAGTCATGTGTAATGGGTAGACAA 60.624 44.000 0.00 0.00 39.27 3.18
1995 4206 6.313519 AGTCATGTGTAATGGGTAGACAAT 57.686 37.500 0.00 0.00 39.27 2.71
1996 4207 6.115446 AGTCATGTGTAATGGGTAGACAATG 58.885 40.000 0.00 0.00 39.27 2.82
1997 4208 6.070251 AGTCATGTGTAATGGGTAGACAATGA 60.070 38.462 0.00 0.00 39.27 2.57
1998 4209 6.037172 GTCATGTGTAATGGGTAGACAATGAC 59.963 42.308 0.00 0.00 39.27 3.06
1999 4210 4.839121 TGTGTAATGGGTAGACAATGACC 58.161 43.478 0.00 0.00 33.25 4.02
2000 4211 4.287326 TGTGTAATGGGTAGACAATGACCA 59.713 41.667 0.00 0.00 37.47 4.02
2001 4212 4.876107 GTGTAATGGGTAGACAATGACCAG 59.124 45.833 0.00 0.00 37.47 4.00
2002 4213 4.780554 TGTAATGGGTAGACAATGACCAGA 59.219 41.667 0.00 0.00 37.47 3.86
2003 4214 5.428457 TGTAATGGGTAGACAATGACCAGAT 59.572 40.000 0.00 0.00 37.47 2.90
2004 4215 6.613679 TGTAATGGGTAGACAATGACCAGATA 59.386 38.462 0.00 0.00 37.47 1.98
2005 4216 6.770286 AATGGGTAGACAATGACCAGATAT 57.230 37.500 0.00 0.00 37.47 1.63
2006 4217 5.551305 TGGGTAGACAATGACCAGATATG 57.449 43.478 0.00 0.00 37.47 1.78
2007 4218 5.215845 TGGGTAGACAATGACCAGATATGA 58.784 41.667 0.00 0.00 37.47 2.15
2008 4219 5.305386 TGGGTAGACAATGACCAGATATGAG 59.695 44.000 0.00 0.00 37.47 2.90
2009 4220 5.279708 GGGTAGACAATGACCAGATATGAGG 60.280 48.000 0.00 0.00 37.47 3.86
2010 4221 4.970860 AGACAATGACCAGATATGAGGG 57.029 45.455 0.00 0.00 0.00 4.30
2011 4222 4.302067 AGACAATGACCAGATATGAGGGT 58.698 43.478 0.00 0.00 37.70 4.34
2012 4223 5.467738 AGACAATGACCAGATATGAGGGTA 58.532 41.667 0.00 0.00 34.39 3.69
2013 4224 5.305644 AGACAATGACCAGATATGAGGGTAC 59.694 44.000 0.00 0.00 34.39 3.34
2014 4225 4.968719 ACAATGACCAGATATGAGGGTACA 59.031 41.667 0.00 0.00 34.39 2.90
2015 4226 5.428457 ACAATGACCAGATATGAGGGTACAA 59.572 40.000 0.00 0.00 34.39 2.41
2016 4227 5.815233 ATGACCAGATATGAGGGTACAAG 57.185 43.478 0.00 0.00 34.39 3.16
2017 4228 4.878968 TGACCAGATATGAGGGTACAAGA 58.121 43.478 0.00 0.00 34.39 3.02
2018 4229 5.467738 TGACCAGATATGAGGGTACAAGAT 58.532 41.667 0.00 0.00 34.39 2.40
2019 4230 5.905331 TGACCAGATATGAGGGTACAAGATT 59.095 40.000 0.00 0.00 34.39 2.40
2020 4231 6.179906 ACCAGATATGAGGGTACAAGATTG 57.820 41.667 0.00 0.00 31.89 2.67
2021 4232 4.999950 CCAGATATGAGGGTACAAGATTGC 59.000 45.833 0.00 0.00 0.00 3.56
2022 4233 5.221803 CCAGATATGAGGGTACAAGATTGCT 60.222 44.000 0.00 0.00 0.00 3.91
2023 4234 6.014242 CCAGATATGAGGGTACAAGATTGCTA 60.014 42.308 0.00 0.00 0.00 3.49
2024 4235 7.095910 CAGATATGAGGGTACAAGATTGCTAG 58.904 42.308 0.00 0.00 0.00 3.42
2025 4236 7.013220 AGATATGAGGGTACAAGATTGCTAGA 58.987 38.462 0.00 0.00 0.00 2.43
2026 4237 5.957771 ATGAGGGTACAAGATTGCTAGAA 57.042 39.130 0.00 0.00 0.00 2.10
2027 4238 5.755409 TGAGGGTACAAGATTGCTAGAAA 57.245 39.130 0.00 0.00 0.00 2.52
2028 4239 6.121776 TGAGGGTACAAGATTGCTAGAAAA 57.878 37.500 0.00 0.00 0.00 2.29
2029 4240 6.173339 TGAGGGTACAAGATTGCTAGAAAAG 58.827 40.000 0.00 0.00 0.00 2.27
2030 4241 6.128138 AGGGTACAAGATTGCTAGAAAAGT 57.872 37.500 0.00 0.00 0.00 2.66
2031 4242 7.038587 TGAGGGTACAAGATTGCTAGAAAAGTA 60.039 37.037 0.00 0.00 0.00 2.24
2032 4243 7.686434 AGGGTACAAGATTGCTAGAAAAGTAA 58.314 34.615 0.00 0.00 34.05 2.24
2033 4244 7.606839 AGGGTACAAGATTGCTAGAAAAGTAAC 59.393 37.037 0.00 0.00 32.17 2.50
2034 4245 7.389607 GGGTACAAGATTGCTAGAAAAGTAACA 59.610 37.037 0.00 0.00 32.17 2.41
2035 4246 8.228464 GGTACAAGATTGCTAGAAAAGTAACAC 58.772 37.037 0.00 0.00 32.17 3.32
2036 4247 6.888430 ACAAGATTGCTAGAAAAGTAACACG 58.112 36.000 0.00 0.00 32.17 4.49
2037 4248 6.482308 ACAAGATTGCTAGAAAAGTAACACGT 59.518 34.615 0.00 0.00 32.17 4.49
2038 4249 6.467723 AGATTGCTAGAAAAGTAACACGTG 57.532 37.500 15.48 15.48 32.17 4.49
2039 4250 4.461992 TTGCTAGAAAAGTAACACGTGC 57.538 40.909 17.22 0.00 0.00 5.34
2040 4251 2.803956 TGCTAGAAAAGTAACACGTGCC 59.196 45.455 17.22 3.70 0.00 5.01
2041 4252 2.159037 GCTAGAAAAGTAACACGTGCCC 59.841 50.000 17.22 3.29 0.00 5.36
2042 4253 2.335316 AGAAAAGTAACACGTGCCCA 57.665 45.000 17.22 0.00 0.00 5.36
2043 4254 2.218603 AGAAAAGTAACACGTGCCCAG 58.781 47.619 17.22 0.00 0.00 4.45
2044 4255 0.666374 AAAAGTAACACGTGCCCAGC 59.334 50.000 17.22 1.67 0.00 4.85
2045 4256 1.170290 AAAGTAACACGTGCCCAGCC 61.170 55.000 17.22 0.00 0.00 4.85
2046 4257 3.419759 GTAACACGTGCCCAGCCG 61.420 66.667 17.22 0.00 0.00 5.52
2076 4287 3.495100 CGGCAGCCATAGAAGGACTAATT 60.495 47.826 13.30 0.00 34.56 1.40
2077 4288 3.817647 GGCAGCCATAGAAGGACTAATTG 59.182 47.826 6.55 0.00 34.56 2.32
2316 4528 6.884832 TCGTCACTCCTTTGTTATATGGAAT 58.115 36.000 0.00 0.00 0.00 3.01
2440 4654 6.398095 GGGGATTTTGGTCTGTTTTCTAATG 58.602 40.000 0.00 0.00 0.00 1.90
2465 6888 8.090831 TGGTATATATGATCTTTCAGTCACAGC 58.909 37.037 0.00 0.00 34.73 4.40
2466 6889 8.090831 GGTATATATGATCTTTCAGTCACAGCA 58.909 37.037 0.00 0.00 34.73 4.41
2547 6970 5.698089 TCATGATGTTTCAGTCACTGTCTTC 59.302 40.000 4.28 5.72 34.73 2.87
2837 7260 4.768583 AGGAGATGAGAGAATTCAAGTGC 58.231 43.478 8.44 0.00 0.00 4.40
2936 7363 6.334202 CCTTCGGACTAGCTATTTCCATATC 58.666 44.000 17.61 0.00 0.00 1.63
2937 7364 6.071334 CCTTCGGACTAGCTATTTCCATATCA 60.071 42.308 17.61 1.09 0.00 2.15
2938 7365 6.516739 TCGGACTAGCTATTTCCATATCAG 57.483 41.667 17.61 4.71 0.00 2.90
3167 7597 7.715249 TGCACAAGTAAAGTTTCAGAAGATAGT 59.285 33.333 0.00 0.00 0.00 2.12
3218 7700 5.664294 ACAAAGCATGGCATTTCTAATCA 57.336 34.783 0.00 0.00 0.00 2.57
3337 7819 9.975218 TTATTCTCAAAGTTTAATTCCTAGCCT 57.025 29.630 0.00 0.00 0.00 4.58
3675 8157 5.539955 AGTGGATCCCCAATTGTATATTTGC 59.460 40.000 9.90 0.00 45.59 3.68
4004 8489 0.249073 CGGGTAAGCAGTCGATCAGG 60.249 60.000 0.00 0.00 0.00 3.86
4254 8739 2.507110 ATCGGTCAAGTGTGGCTCGG 62.507 60.000 0.00 0.00 0.00 4.63
4390 8875 5.640357 CAGTCTCTGACGTCTAGAAGTAGTT 59.360 44.000 17.92 0.00 37.67 2.24
4391 8876 6.148150 CAGTCTCTGACGTCTAGAAGTAGTTT 59.852 42.308 17.92 0.00 37.67 2.66
4620 9131 2.688364 AAAAACTGCTCGCTAACTGC 57.312 45.000 0.00 0.00 38.57 4.40
4621 9132 1.884235 AAAACTGCTCGCTAACTGCT 58.116 45.000 0.00 0.00 40.11 4.24
4623 9134 0.734253 AACTGCTCGCTAACTGCTCG 60.734 55.000 0.00 0.00 40.11 5.03
4624 9135 2.507102 TGCTCGCTAACTGCTCGC 60.507 61.111 0.00 0.00 40.11 5.03
4635 9167 1.177401 ACTGCTCGCTGATAGACACA 58.823 50.000 2.72 0.00 0.00 3.72
4665 9197 3.680642 AATTCGTTAGTAGTAGCGCGA 57.319 42.857 12.10 0.00 33.24 5.87
4669 9201 3.384668 TCGTTAGTAGTAGCGCGAGTAT 58.615 45.455 12.10 0.00 33.24 2.12
4676 9208 6.497785 AGTAGTAGCGCGAGTATGAAATAT 57.502 37.500 12.10 0.00 0.00 1.28
4794 9381 3.736252 CGCGCTGCTATTAGTCATTTACT 59.264 43.478 5.56 0.00 42.62 2.24
4798 9385 5.748630 CGCTGCTATTAGTCATTTACTCACA 59.251 40.000 0.00 0.00 39.80 3.58
4940 9534 5.079643 GCAATACCCACATATTCCCAATCT 58.920 41.667 0.00 0.00 0.00 2.40
5023 9622 4.887071 TCAAAGTGTGAACTTGCCTTGTAT 59.113 37.500 0.00 0.00 31.51 2.29
5031 9630 6.488344 TGTGAACTTGCCTTGTATTGTTGATA 59.512 34.615 0.00 0.00 0.00 2.15
5032 9631 7.023575 GTGAACTTGCCTTGTATTGTTGATAG 58.976 38.462 0.00 0.00 0.00 2.08
5047 9652 6.588348 TGTTGATAGTTCGCACTCATAATG 57.412 37.500 0.00 0.00 34.06 1.90
5123 9729 9.783081 ATTATAATCACACATAGCAATCACTCA 57.217 29.630 0.00 0.00 0.00 3.41
5153 9760 6.683715 TCCAAAAGAACGAAGAAAACACTTT 58.316 32.000 0.00 0.00 0.00 2.66
5160 9767 7.149307 AGAACGAAGAAAACACTTTGGAAAAA 58.851 30.769 0.00 0.00 36.06 1.94
5161 9768 6.944557 ACGAAGAAAACACTTTGGAAAAAG 57.055 33.333 0.00 0.00 36.06 2.27
5164 9771 6.237201 CGAAGAAAACACTTTGGAAAAAGTCG 60.237 38.462 0.96 1.43 40.74 4.18
5169 9776 7.899178 AAACACTTTGGAAAAAGTCGAAAAT 57.101 28.000 0.96 0.00 40.74 1.82
5177 9784 5.980715 TGGAAAAAGTCGAAAATAGGCAAAC 59.019 36.000 0.00 0.00 0.00 2.93
5198 9805 6.466308 AACAACTCTTGCAAACAGAAAAAC 57.534 33.333 11.23 0.00 0.00 2.43
5199 9806 5.537188 ACAACTCTTGCAAACAGAAAAACA 58.463 33.333 11.23 0.00 0.00 2.83
5267 9874 8.691661 AAAGTTTAGGTCAAGAGCTTCAATTA 57.308 30.769 7.13 0.00 40.09 1.40
5281 9888 9.468532 AGAGCTTCAATTAACAAAAAGAATCAC 57.531 29.630 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.647827 TGATTTTTGGGATTGAGTTAGGGATA 58.352 34.615 0.00 0.00 0.00 2.59
1 2 6.502138 TGATTTTTGGGATTGAGTTAGGGAT 58.498 36.000 0.00 0.00 0.00 3.85
2 3 5.898120 TGATTTTTGGGATTGAGTTAGGGA 58.102 37.500 0.00 0.00 0.00 4.20
3 4 6.796785 ATGATTTTTGGGATTGAGTTAGGG 57.203 37.500 0.00 0.00 0.00 3.53
9 10 9.546428 GGGTTATTAATGATTTTTGGGATTGAG 57.454 33.333 0.00 0.00 0.00 3.02
10 11 9.051259 TGGGTTATTAATGATTTTTGGGATTGA 57.949 29.630 0.00 0.00 0.00 2.57
11 12 9.678260 TTGGGTTATTAATGATTTTTGGGATTG 57.322 29.630 0.00 0.00 0.00 2.67
12 13 9.679661 GTTGGGTTATTAATGATTTTTGGGATT 57.320 29.630 0.00 0.00 0.00 3.01
13 14 8.830741 TGTTGGGTTATTAATGATTTTTGGGAT 58.169 29.630 0.00 0.00 0.00 3.85
14 15 8.207350 TGTTGGGTTATTAATGATTTTTGGGA 57.793 30.769 0.00 0.00 0.00 4.37
15 16 8.726068 GTTGTTGGGTTATTAATGATTTTTGGG 58.274 33.333 0.00 0.00 0.00 4.12
16 17 9.500785 AGTTGTTGGGTTATTAATGATTTTTGG 57.499 29.630 0.00 0.00 0.00 3.28
30 31 9.802039 ACTCTATTTAATGAAGTTGTTGGGTTA 57.198 29.630 0.00 0.00 0.00 2.85
31 32 8.576442 CACTCTATTTAATGAAGTTGTTGGGTT 58.424 33.333 0.00 0.00 0.00 4.11
32 33 7.942341 TCACTCTATTTAATGAAGTTGTTGGGT 59.058 33.333 0.00 0.00 0.00 4.51
33 34 8.335532 TCACTCTATTTAATGAAGTTGTTGGG 57.664 34.615 0.00 0.00 0.00 4.12
34 35 9.778993 CATCACTCTATTTAATGAAGTTGTTGG 57.221 33.333 0.00 0.00 0.00 3.77
85 86 8.917088 CCTGGTTATGGACAATTTTGAATATCT 58.083 33.333 0.00 0.00 0.00 1.98
86 87 8.143835 CCCTGGTTATGGACAATTTTGAATATC 58.856 37.037 0.00 0.00 0.00 1.63
87 88 7.843760 TCCCTGGTTATGGACAATTTTGAATAT 59.156 33.333 0.00 0.00 0.00 1.28
88 89 7.185565 TCCCTGGTTATGGACAATTTTGAATA 58.814 34.615 0.00 0.00 0.00 1.75
89 90 6.022315 TCCCTGGTTATGGACAATTTTGAAT 58.978 36.000 0.00 0.00 0.00 2.57
90 91 5.398236 TCCCTGGTTATGGACAATTTTGAA 58.602 37.500 0.00 0.00 0.00 2.69
91 92 5.004361 TCCCTGGTTATGGACAATTTTGA 57.996 39.130 0.00 0.00 0.00 2.69
100 101 5.279960 CGAATATCATGTCCCTGGTTATGGA 60.280 44.000 0.00 0.00 0.00 3.41
101 102 4.937620 CGAATATCATGTCCCTGGTTATGG 59.062 45.833 0.00 0.00 0.00 2.74
102 103 5.409520 CACGAATATCATGTCCCTGGTTATG 59.590 44.000 0.00 0.00 0.00 1.90
103 104 5.306937 TCACGAATATCATGTCCCTGGTTAT 59.693 40.000 0.00 0.00 0.00 1.89
104 105 4.651962 TCACGAATATCATGTCCCTGGTTA 59.348 41.667 0.00 0.00 0.00 2.85
105 106 3.454447 TCACGAATATCATGTCCCTGGTT 59.546 43.478 0.00 0.00 0.00 3.67
106 107 3.038280 TCACGAATATCATGTCCCTGGT 58.962 45.455 0.00 0.00 0.00 4.00
107 108 3.751479 TCACGAATATCATGTCCCTGG 57.249 47.619 0.00 0.00 0.00 4.45
108 109 6.459066 ACTATTCACGAATATCATGTCCCTG 58.541 40.000 0.12 0.00 33.29 4.45
109 110 6.672266 ACTATTCACGAATATCATGTCCCT 57.328 37.500 0.12 0.00 33.29 4.20
110 111 7.226720 ACAAACTATTCACGAATATCATGTCCC 59.773 37.037 0.12 0.00 33.29 4.46
111 112 8.142994 ACAAACTATTCACGAATATCATGTCC 57.857 34.615 0.12 0.00 33.29 4.02
113 114 9.594478 TGTACAAACTATTCACGAATATCATGT 57.406 29.630 0.00 7.84 33.29 3.21
114 115 9.849607 GTGTACAAACTATTCACGAATATCATG 57.150 33.333 0.00 0.00 33.29 3.07
115 116 9.817809 AGTGTACAAACTATTCACGAATATCAT 57.182 29.630 0.00 0.00 33.29 2.45
116 117 9.297586 GAGTGTACAAACTATTCACGAATATCA 57.702 33.333 0.00 0.00 33.29 2.15
117 118 9.517609 AGAGTGTACAAACTATTCACGAATATC 57.482 33.333 0.00 0.00 33.29 1.63
118 119 9.302345 CAGAGTGTACAAACTATTCACGAATAT 57.698 33.333 0.00 0.00 33.29 1.28
119 120 7.274904 GCAGAGTGTACAAACTATTCACGAATA 59.725 37.037 0.00 0.00 34.71 1.75
120 121 6.090898 GCAGAGTGTACAAACTATTCACGAAT 59.909 38.462 0.00 0.00 34.71 3.34
121 122 5.404366 GCAGAGTGTACAAACTATTCACGAA 59.596 40.000 0.00 0.00 34.71 3.85
122 123 4.921515 GCAGAGTGTACAAACTATTCACGA 59.078 41.667 0.00 0.00 34.71 4.35
123 124 4.201494 CGCAGAGTGTACAAACTATTCACG 60.201 45.833 0.00 0.00 34.71 4.35
124 125 4.091509 CCGCAGAGTGTACAAACTATTCAC 59.908 45.833 0.00 0.00 0.00 3.18
125 126 4.021807 TCCGCAGAGTGTACAAACTATTCA 60.022 41.667 0.00 0.00 0.00 2.57
126 127 4.491676 TCCGCAGAGTGTACAAACTATTC 58.508 43.478 0.00 0.00 0.00 1.75
127 128 4.495422 CTCCGCAGAGTGTACAAACTATT 58.505 43.478 0.00 0.00 35.21 1.73
128 129 3.119101 CCTCCGCAGAGTGTACAAACTAT 60.119 47.826 0.00 0.00 38.58 2.12
129 130 2.230508 CCTCCGCAGAGTGTACAAACTA 59.769 50.000 0.00 0.00 38.58 2.24
130 131 1.000955 CCTCCGCAGAGTGTACAAACT 59.999 52.381 0.00 0.00 38.58 2.66
131 132 1.270147 ACCTCCGCAGAGTGTACAAAC 60.270 52.381 0.00 0.00 38.58 2.93
132 133 1.045407 ACCTCCGCAGAGTGTACAAA 58.955 50.000 0.00 0.00 38.58 2.83
133 134 1.045407 AACCTCCGCAGAGTGTACAA 58.955 50.000 0.00 0.00 38.58 2.41
134 135 1.045407 AAACCTCCGCAGAGTGTACA 58.955 50.000 0.00 0.00 38.58 2.90
135 136 1.000506 TCAAACCTCCGCAGAGTGTAC 59.999 52.381 0.00 0.00 38.58 2.90
136 137 1.272490 CTCAAACCTCCGCAGAGTGTA 59.728 52.381 0.00 0.00 38.58 2.90
137 138 0.034059 CTCAAACCTCCGCAGAGTGT 59.966 55.000 0.00 0.00 38.58 3.55
138 139 0.318441 TCTCAAACCTCCGCAGAGTG 59.682 55.000 0.00 0.00 38.58 3.51
139 140 1.048601 TTCTCAAACCTCCGCAGAGT 58.951 50.000 0.00 0.00 38.58 3.24
140 141 1.801178 GTTTCTCAAACCTCCGCAGAG 59.199 52.381 0.00 0.00 40.09 3.35
141 142 1.872237 CGTTTCTCAAACCTCCGCAGA 60.872 52.381 0.00 0.00 38.14 4.26
142 143 0.512952 CGTTTCTCAAACCTCCGCAG 59.487 55.000 0.00 0.00 38.14 5.18
143 144 0.882927 CCGTTTCTCAAACCTCCGCA 60.883 55.000 0.00 0.00 38.14 5.69
144 145 0.601841 TCCGTTTCTCAAACCTCCGC 60.602 55.000 0.00 0.00 38.14 5.54
145 146 1.732259 CATCCGTTTCTCAAACCTCCG 59.268 52.381 0.00 0.00 38.14 4.63
146 147 3.053831 TCATCCGTTTCTCAAACCTCC 57.946 47.619 0.00 0.00 38.14 4.30
147 148 3.307242 CGATCATCCGTTTCTCAAACCTC 59.693 47.826 0.00 0.00 38.14 3.85
148 149 3.056107 TCGATCATCCGTTTCTCAAACCT 60.056 43.478 0.00 0.00 38.14 3.50
149 150 3.259064 TCGATCATCCGTTTCTCAAACC 58.741 45.455 0.00 0.00 38.14 3.27
150 151 4.031878 GTCTCGATCATCCGTTTCTCAAAC 59.968 45.833 0.00 0.00 38.02 2.93
151 152 4.174009 GTCTCGATCATCCGTTTCTCAAA 58.826 43.478 0.00 0.00 0.00 2.69
152 153 3.192633 TGTCTCGATCATCCGTTTCTCAA 59.807 43.478 0.00 0.00 0.00 3.02
153 154 2.752903 TGTCTCGATCATCCGTTTCTCA 59.247 45.455 0.00 0.00 0.00 3.27
154 155 3.109619 GTGTCTCGATCATCCGTTTCTC 58.890 50.000 0.00 0.00 0.00 2.87
155 156 2.492088 TGTGTCTCGATCATCCGTTTCT 59.508 45.455 0.00 0.00 0.00 2.52
156 157 2.876091 TGTGTCTCGATCATCCGTTTC 58.124 47.619 0.00 0.00 0.00 2.78
157 158 3.313012 TTGTGTCTCGATCATCCGTTT 57.687 42.857 0.00 0.00 0.00 3.60
158 159 3.448686 GATTGTGTCTCGATCATCCGTT 58.551 45.455 0.00 0.00 37.03 4.44
159 160 2.541794 CGATTGTGTCTCGATCATCCGT 60.542 50.000 0.00 0.00 38.38 4.69
160 161 2.047040 CGATTGTGTCTCGATCATCCG 58.953 52.381 0.00 0.00 38.38 4.18
161 162 3.085443 ACGATTGTGTCTCGATCATCC 57.915 47.619 0.00 0.00 39.38 3.51
162 163 3.487574 GGAACGATTGTGTCTCGATCATC 59.512 47.826 0.00 1.48 39.01 2.92
163 164 3.448686 GGAACGATTGTGTCTCGATCAT 58.551 45.455 0.00 0.00 39.01 2.45
164 165 2.876091 GGAACGATTGTGTCTCGATCA 58.124 47.619 0.00 0.00 39.01 2.92
191 192 4.223255 GGCCTATCTATCAGTTAAGGGGAC 59.777 50.000 0.00 0.00 0.00 4.46
192 193 4.426704 GGCCTATCTATCAGTTAAGGGGA 58.573 47.826 0.00 0.00 0.00 4.81
193 194 3.195825 CGGCCTATCTATCAGTTAAGGGG 59.804 52.174 0.00 0.00 0.00 4.79
194 195 3.195825 CCGGCCTATCTATCAGTTAAGGG 59.804 52.174 0.00 0.00 0.00 3.95
195 196 3.833070 ACCGGCCTATCTATCAGTTAAGG 59.167 47.826 0.00 0.00 0.00 2.69
196 197 5.475909 TGTACCGGCCTATCTATCAGTTAAG 59.524 44.000 0.00 0.00 0.00 1.85
197 198 5.242393 GTGTACCGGCCTATCTATCAGTTAA 59.758 44.000 0.00 0.00 0.00 2.01
198 199 4.763793 GTGTACCGGCCTATCTATCAGTTA 59.236 45.833 0.00 0.00 0.00 2.24
199 200 3.573110 GTGTACCGGCCTATCTATCAGTT 59.427 47.826 0.00 0.00 0.00 3.16
200 201 3.155501 GTGTACCGGCCTATCTATCAGT 58.844 50.000 0.00 0.00 0.00 3.41
201 202 2.492484 GGTGTACCGGCCTATCTATCAG 59.508 54.545 0.00 0.00 0.00 2.90
202 203 2.109480 AGGTGTACCGGCCTATCTATCA 59.891 50.000 0.00 0.00 42.08 2.15
203 204 2.805194 AGGTGTACCGGCCTATCTATC 58.195 52.381 0.00 0.00 42.08 2.08
204 205 2.994957 AGGTGTACCGGCCTATCTAT 57.005 50.000 0.00 0.00 42.08 1.98
205 206 2.442878 TGTAGGTGTACCGGCCTATCTA 59.557 50.000 0.00 0.00 39.30 1.98
206 207 1.216175 TGTAGGTGTACCGGCCTATCT 59.784 52.381 0.00 0.00 39.30 1.98
207 208 1.696063 TGTAGGTGTACCGGCCTATC 58.304 55.000 0.00 0.38 39.30 2.08
208 209 2.163810 TTGTAGGTGTACCGGCCTAT 57.836 50.000 0.00 0.00 39.30 2.57
209 210 2.163810 ATTGTAGGTGTACCGGCCTA 57.836 50.000 0.00 0.37 42.08 3.93
210 211 1.208776 GAATTGTAGGTGTACCGGCCT 59.791 52.381 0.00 1.59 42.08 5.19
211 212 1.660167 GAATTGTAGGTGTACCGGCC 58.340 55.000 0.00 0.00 42.08 6.13
212 213 1.660167 GGAATTGTAGGTGTACCGGC 58.340 55.000 0.00 0.00 42.08 6.13
213 214 1.134310 GGGGAATTGTAGGTGTACCGG 60.134 57.143 0.00 0.00 42.08 5.28
214 215 1.835531 AGGGGAATTGTAGGTGTACCG 59.164 52.381 0.00 0.00 42.08 4.02
215 216 3.776417 TGTAGGGGAATTGTAGGTGTACC 59.224 47.826 0.00 0.00 0.00 3.34
216 217 5.365895 AGATGTAGGGGAATTGTAGGTGTAC 59.634 44.000 0.00 0.00 0.00 2.90
217 218 5.365605 CAGATGTAGGGGAATTGTAGGTGTA 59.634 44.000 0.00 0.00 0.00 2.90
218 219 4.164221 CAGATGTAGGGGAATTGTAGGTGT 59.836 45.833 0.00 0.00 0.00 4.16
219 220 4.708177 CAGATGTAGGGGAATTGTAGGTG 58.292 47.826 0.00 0.00 0.00 4.00
220 221 3.136626 GCAGATGTAGGGGAATTGTAGGT 59.863 47.826 0.00 0.00 0.00 3.08
221 222 3.392616 AGCAGATGTAGGGGAATTGTAGG 59.607 47.826 0.00 0.00 0.00 3.18
222 223 4.696479 AGCAGATGTAGGGGAATTGTAG 57.304 45.455 0.00 0.00 0.00 2.74
223 224 4.040461 GCTAGCAGATGTAGGGGAATTGTA 59.960 45.833 10.63 0.00 0.00 2.41
224 225 3.181450 GCTAGCAGATGTAGGGGAATTGT 60.181 47.826 10.63 0.00 0.00 2.71
225 226 3.406764 GCTAGCAGATGTAGGGGAATTG 58.593 50.000 10.63 0.00 0.00 2.32
226 227 2.373502 GGCTAGCAGATGTAGGGGAATT 59.626 50.000 18.24 0.00 0.00 2.17
227 228 1.981495 GGCTAGCAGATGTAGGGGAAT 59.019 52.381 18.24 0.00 0.00 3.01
228 229 1.062121 AGGCTAGCAGATGTAGGGGAA 60.062 52.381 18.24 0.00 0.00 3.97
229 230 0.563173 AGGCTAGCAGATGTAGGGGA 59.437 55.000 18.24 0.00 0.00 4.81
230 231 2.310779 TAGGCTAGCAGATGTAGGGG 57.689 55.000 18.24 0.00 0.00 4.79
231 232 3.435275 TGATAGGCTAGCAGATGTAGGG 58.565 50.000 18.24 0.00 0.00 3.53
232 233 4.141981 CCATGATAGGCTAGCAGATGTAGG 60.142 50.000 18.25 8.74 0.00 3.18
233 234 4.708909 TCCATGATAGGCTAGCAGATGTAG 59.291 45.833 18.25 1.68 0.00 2.74
234 235 4.677182 TCCATGATAGGCTAGCAGATGTA 58.323 43.478 18.25 0.00 0.00 2.29
235 236 3.514539 TCCATGATAGGCTAGCAGATGT 58.485 45.455 18.25 0.00 0.00 3.06
236 237 4.548451 TTCCATGATAGGCTAGCAGATG 57.452 45.455 18.25 11.93 0.00 2.90
237 238 4.019501 CCTTTCCATGATAGGCTAGCAGAT 60.020 45.833 18.25 8.76 0.00 2.90
238 239 3.326006 CCTTTCCATGATAGGCTAGCAGA 59.674 47.826 18.25 8.05 0.00 4.26
239 240 3.072184 ACCTTTCCATGATAGGCTAGCAG 59.928 47.826 18.25 9.87 34.81 4.24
240 241 3.048600 ACCTTTCCATGATAGGCTAGCA 58.951 45.455 15.65 15.65 34.81 3.49
241 242 3.778954 ACCTTTCCATGATAGGCTAGC 57.221 47.619 6.04 6.04 34.81 3.42
266 267 1.537348 GCAGCCACATGCCATATTGTG 60.537 52.381 0.00 0.00 42.71 3.33
267 268 0.748450 GCAGCCACATGCCATATTGT 59.252 50.000 0.00 0.00 42.71 2.71
268 269 0.747852 TGCAGCCACATGCCATATTG 59.252 50.000 0.00 0.00 45.91 1.90
269 270 1.712056 ATGCAGCCACATGCCATATT 58.288 45.000 0.00 0.00 45.91 1.28
270 271 2.165167 GTATGCAGCCACATGCCATAT 58.835 47.619 0.00 0.00 45.91 1.78
271 272 1.608055 GTATGCAGCCACATGCCATA 58.392 50.000 0.00 0.00 45.91 2.74
272 273 1.449726 CGTATGCAGCCACATGCCAT 61.450 55.000 0.00 0.00 45.91 4.40
273 274 2.114051 CGTATGCAGCCACATGCCA 61.114 57.895 0.00 0.00 45.91 4.92
274 275 1.375853 TTCGTATGCAGCCACATGCC 61.376 55.000 0.00 0.00 45.91 4.40
275 276 0.451383 TTTCGTATGCAGCCACATGC 59.549 50.000 0.00 0.00 46.68 4.06
276 277 1.739466 ACTTTCGTATGCAGCCACATG 59.261 47.619 0.00 0.00 0.00 3.21
277 278 2.113860 ACTTTCGTATGCAGCCACAT 57.886 45.000 0.00 0.00 0.00 3.21
278 279 1.890876 AACTTTCGTATGCAGCCACA 58.109 45.000 0.00 0.00 0.00 4.17
279 280 2.484264 AGAAACTTTCGTATGCAGCCAC 59.516 45.455 0.00 0.00 34.02 5.01
280 281 2.778299 AGAAACTTTCGTATGCAGCCA 58.222 42.857 0.00 0.00 34.02 4.75
281 282 3.242446 GCTAGAAACTTTCGTATGCAGCC 60.242 47.826 0.00 0.00 34.02 4.85
282 283 3.370978 TGCTAGAAACTTTCGTATGCAGC 59.629 43.478 0.00 0.00 34.02 5.25
283 284 5.291858 TCATGCTAGAAACTTTCGTATGCAG 59.708 40.000 14.25 9.51 32.52 4.41
284 285 5.175127 TCATGCTAGAAACTTTCGTATGCA 58.825 37.500 0.00 12.51 33.10 3.96
285 286 5.718649 TCATGCTAGAAACTTTCGTATGC 57.281 39.130 0.00 1.36 34.02 3.14
288 289 9.817809 AGATTATTCATGCTAGAAACTTTCGTA 57.182 29.630 0.00 0.00 34.02 3.43
289 290 8.723942 AGATTATTCATGCTAGAAACTTTCGT 57.276 30.769 0.00 0.00 34.02 3.85
297 298 9.896645 GGGATCATAAGATTATTCATGCTAGAA 57.103 33.333 0.00 0.00 33.72 2.10
298 299 9.276791 AGGGATCATAAGATTATTCATGCTAGA 57.723 33.333 0.00 0.00 33.72 2.43
299 300 9.902684 AAGGGATCATAAGATTATTCATGCTAG 57.097 33.333 0.00 0.00 33.72 3.42
305 306 9.520515 GGCTTAAAGGGATCATAAGATTATTCA 57.479 33.333 0.00 0.00 33.72 2.57
306 307 9.746457 AGGCTTAAAGGGATCATAAGATTATTC 57.254 33.333 0.00 0.00 33.72 1.75
307 308 9.525826 CAGGCTTAAAGGGATCATAAGATTATT 57.474 33.333 0.00 0.00 33.72 1.40
308 309 8.112183 CCAGGCTTAAAGGGATCATAAGATTAT 58.888 37.037 0.00 0.00 33.72 1.28
309 310 7.461749 CCAGGCTTAAAGGGATCATAAGATTA 58.538 38.462 0.00 0.00 33.72 1.75
310 311 6.310149 CCAGGCTTAAAGGGATCATAAGATT 58.690 40.000 0.00 0.00 33.72 2.40
311 312 5.222213 CCCAGGCTTAAAGGGATCATAAGAT 60.222 44.000 1.34 0.00 45.80 2.40
312 313 4.104738 CCCAGGCTTAAAGGGATCATAAGA 59.895 45.833 1.34 0.00 45.80 2.10
313 314 4.141158 ACCCAGGCTTAAAGGGATCATAAG 60.141 45.833 14.20 0.00 45.80 1.73
314 315 3.791545 ACCCAGGCTTAAAGGGATCATAA 59.208 43.478 14.20 0.00 45.80 1.90
315 316 3.138283 CACCCAGGCTTAAAGGGATCATA 59.862 47.826 14.20 0.00 45.80 2.15
316 317 2.091665 CACCCAGGCTTAAAGGGATCAT 60.092 50.000 14.20 0.00 45.80 2.45
317 318 1.284785 CACCCAGGCTTAAAGGGATCA 59.715 52.381 14.20 0.00 45.80 2.92
318 319 1.410224 CCACCCAGGCTTAAAGGGATC 60.410 57.143 14.20 0.00 45.80 3.36
319 320 0.631212 CCACCCAGGCTTAAAGGGAT 59.369 55.000 14.20 0.00 45.80 3.85
320 321 2.083715 CCACCCAGGCTTAAAGGGA 58.916 57.895 14.20 0.00 45.80 4.20
337 338 3.755378 GTGTGATCATCCTATGGAATGCC 59.245 47.826 0.00 0.00 34.34 4.40
338 339 3.434641 CGTGTGATCATCCTATGGAATGC 59.565 47.826 0.00 0.00 34.34 3.56
339 340 3.999001 CCGTGTGATCATCCTATGGAATG 59.001 47.826 0.00 0.00 34.34 2.67
340 341 3.008375 CCCGTGTGATCATCCTATGGAAT 59.992 47.826 0.00 0.00 34.34 3.01
341 342 2.368548 CCCGTGTGATCATCCTATGGAA 59.631 50.000 0.00 0.00 34.34 3.53
342 343 1.970640 CCCGTGTGATCATCCTATGGA 59.029 52.381 0.00 0.00 35.55 3.41
343 344 1.694150 ACCCGTGTGATCATCCTATGG 59.306 52.381 0.00 1.36 0.00 2.74
344 345 3.306088 GGTACCCGTGTGATCATCCTATG 60.306 52.174 0.00 0.00 0.00 2.23
345 346 2.897969 GGTACCCGTGTGATCATCCTAT 59.102 50.000 0.00 0.00 0.00 2.57
346 347 2.313317 GGTACCCGTGTGATCATCCTA 58.687 52.381 0.00 0.00 0.00 2.94
347 348 1.120530 GGTACCCGTGTGATCATCCT 58.879 55.000 0.00 0.00 0.00 3.24
348 349 3.680842 GGTACCCGTGTGATCATCC 57.319 57.895 0.00 0.00 0.00 3.51
362 363 0.776176 TCCTAGGAGATCCCGGGTAC 59.224 60.000 22.86 15.75 40.87 3.34
363 364 0.776176 GTCCTAGGAGATCCCGGGTA 59.224 60.000 22.86 7.86 40.87 3.69
364 365 1.294426 TGTCCTAGGAGATCCCGGGT 61.294 60.000 22.86 8.01 40.87 5.28
365 366 0.105658 TTGTCCTAGGAGATCCCGGG 60.106 60.000 16.85 16.85 40.87 5.73
366 367 1.041437 GTTGTCCTAGGAGATCCCGG 58.959 60.000 13.15 0.00 40.87 5.73
367 368 1.409427 GTGTTGTCCTAGGAGATCCCG 59.591 57.143 13.15 0.00 40.87 5.14
368 369 2.432510 CAGTGTTGTCCTAGGAGATCCC 59.567 54.545 13.15 1.10 36.42 3.85
369 370 2.432510 CCAGTGTTGTCCTAGGAGATCC 59.567 54.545 13.15 5.44 0.00 3.36
370 371 3.366396 TCCAGTGTTGTCCTAGGAGATC 58.634 50.000 13.15 11.00 0.00 2.75
371 372 3.474798 TCCAGTGTTGTCCTAGGAGAT 57.525 47.619 13.15 0.00 0.00 2.75
372 373 2.992847 TCCAGTGTTGTCCTAGGAGA 57.007 50.000 13.15 8.50 0.00 3.71
373 374 3.118592 GGAATCCAGTGTTGTCCTAGGAG 60.119 52.174 13.15 0.00 0.00 3.69
374 375 2.838202 GGAATCCAGTGTTGTCCTAGGA 59.162 50.000 7.62 7.62 0.00 2.94
375 376 2.840651 AGGAATCCAGTGTTGTCCTAGG 59.159 50.000 0.82 0.82 36.94 3.02
376 377 3.515502 TGAGGAATCCAGTGTTGTCCTAG 59.484 47.826 0.61 0.00 38.85 3.02
377 378 3.515502 CTGAGGAATCCAGTGTTGTCCTA 59.484 47.826 0.61 0.00 38.85 2.94
378 379 2.304180 CTGAGGAATCCAGTGTTGTCCT 59.696 50.000 0.61 5.63 41.49 3.85
379 380 2.616510 CCTGAGGAATCCAGTGTTGTCC 60.617 54.545 0.61 0.00 0.00 4.02
380 381 2.039084 ACCTGAGGAATCCAGTGTTGTC 59.961 50.000 4.99 0.00 0.00 3.18
381 382 2.057922 ACCTGAGGAATCCAGTGTTGT 58.942 47.619 4.99 0.00 0.00 3.32
382 383 2.430465 CACCTGAGGAATCCAGTGTTG 58.570 52.381 4.99 0.00 0.00 3.33
383 384 1.271597 GCACCTGAGGAATCCAGTGTT 60.272 52.381 4.99 0.00 0.00 3.32
384 385 0.326264 GCACCTGAGGAATCCAGTGT 59.674 55.000 4.99 0.00 0.00 3.55
385 386 0.393537 GGCACCTGAGGAATCCAGTG 60.394 60.000 4.99 4.81 0.00 3.66
386 387 1.994463 GGCACCTGAGGAATCCAGT 59.006 57.895 4.99 0.00 0.00 4.00
387 388 4.972875 GGCACCTGAGGAATCCAG 57.027 61.111 4.99 0.00 0.00 3.86
400 401 1.665442 GTGGATTGGTTGTGGGCAC 59.335 57.895 0.00 0.00 0.00 5.01
401 402 1.532794 GGTGGATTGGTTGTGGGCA 60.533 57.895 0.00 0.00 0.00 5.36
402 403 2.282783 GGGTGGATTGGTTGTGGGC 61.283 63.158 0.00 0.00 0.00 5.36
403 404 0.899717 CTGGGTGGATTGGTTGTGGG 60.900 60.000 0.00 0.00 0.00 4.61
404 405 0.112218 TCTGGGTGGATTGGTTGTGG 59.888 55.000 0.00 0.00 0.00 4.17
405 406 1.820519 CATCTGGGTGGATTGGTTGTG 59.179 52.381 0.00 0.00 0.00 3.33
406 407 1.428912 ACATCTGGGTGGATTGGTTGT 59.571 47.619 0.00 0.00 0.00 3.32
407 408 1.820519 CACATCTGGGTGGATTGGTTG 59.179 52.381 0.00 0.00 35.13 3.77
408 409 1.428912 ACACATCTGGGTGGATTGGTT 59.571 47.619 0.00 0.00 43.08 3.67
409 410 1.075601 ACACATCTGGGTGGATTGGT 58.924 50.000 0.00 0.00 43.08 3.67
410 411 3.582998 ATACACATCTGGGTGGATTGG 57.417 47.619 0.00 0.00 39.29 3.16
413 414 7.448469 GCTATTTTAATACACATCTGGGTGGAT 59.552 37.037 0.00 0.00 44.20 3.41
414 415 6.770785 GCTATTTTAATACACATCTGGGTGGA 59.229 38.462 0.00 0.00 43.08 4.02
415 416 6.016276 GGCTATTTTAATACACATCTGGGTGG 60.016 42.308 0.00 0.00 43.08 4.61
416 417 6.545666 TGGCTATTTTAATACACATCTGGGTG 59.454 38.462 0.00 0.00 44.35 4.61
417 418 6.546034 GTGGCTATTTTAATACACATCTGGGT 59.454 38.462 0.00 0.00 34.93 4.51
418 419 6.016276 GGTGGCTATTTTAATACACATCTGGG 60.016 42.308 0.00 0.00 0.00 4.45
419 420 6.772716 AGGTGGCTATTTTAATACACATCTGG 59.227 38.462 0.00 0.00 0.00 3.86
420 421 7.807977 AGGTGGCTATTTTAATACACATCTG 57.192 36.000 0.00 0.00 0.00 2.90
421 422 9.914834 TTAAGGTGGCTATTTTAATACACATCT 57.085 29.630 0.00 0.00 0.00 2.90
423 424 9.695155 ACTTAAGGTGGCTATTTTAATACACAT 57.305 29.630 7.53 0.00 0.00 3.21
424 425 9.523168 AACTTAAGGTGGCTATTTTAATACACA 57.477 29.630 7.53 0.00 0.00 3.72
428 429 9.192642 GGGAAACTTAAGGTGGCTATTTTAATA 57.807 33.333 7.53 0.00 0.00 0.98
429 430 7.899172 AGGGAAACTTAAGGTGGCTATTTTAAT 59.101 33.333 7.53 0.00 0.00 1.40
430 431 7.243091 AGGGAAACTTAAGGTGGCTATTTTAA 58.757 34.615 7.53 0.00 0.00 1.52
431 432 6.796648 AGGGAAACTTAAGGTGGCTATTTTA 58.203 36.000 7.53 0.00 0.00 1.52
432 433 5.651303 AGGGAAACTTAAGGTGGCTATTTT 58.349 37.500 7.53 0.00 0.00 1.82
433 434 5.270979 AGGGAAACTTAAGGTGGCTATTT 57.729 39.130 7.53 0.00 0.00 1.40
434 435 4.948062 AGGGAAACTTAAGGTGGCTATT 57.052 40.909 7.53 0.00 0.00 1.73
435 436 4.948062 AAGGGAAACTTAAGGTGGCTAT 57.052 40.909 7.53 0.00 37.74 2.97
436 437 4.848086 ACTAAGGGAAACTTAAGGTGGCTA 59.152 41.667 7.53 0.00 40.97 3.93
437 438 3.656264 ACTAAGGGAAACTTAAGGTGGCT 59.344 43.478 7.53 0.00 40.97 4.75
438 439 4.030314 ACTAAGGGAAACTTAAGGTGGC 57.970 45.455 7.53 0.00 40.97 5.01
439 440 8.645814 ATTTAACTAAGGGAAACTTAAGGTGG 57.354 34.615 7.53 0.00 40.97 4.61
446 447 9.433153 CGAGAGTAATTTAACTAAGGGAAACTT 57.567 33.333 0.00 0.00 43.28 2.66
447 448 7.548427 GCGAGAGTAATTTAACTAAGGGAAACT 59.452 37.037 0.00 0.00 0.00 2.66
448 449 7.332678 TGCGAGAGTAATTTAACTAAGGGAAAC 59.667 37.037 0.00 0.00 0.00 2.78
449 450 7.388437 TGCGAGAGTAATTTAACTAAGGGAAA 58.612 34.615 0.00 0.00 0.00 3.13
450 451 6.938507 TGCGAGAGTAATTTAACTAAGGGAA 58.061 36.000 0.00 0.00 0.00 3.97
451 452 6.534475 TGCGAGAGTAATTTAACTAAGGGA 57.466 37.500 0.00 0.00 0.00 4.20
452 453 6.817140 AGTTGCGAGAGTAATTTAACTAAGGG 59.183 38.462 0.00 0.00 38.17 3.95
453 454 7.829378 AGTTGCGAGAGTAATTTAACTAAGG 57.171 36.000 0.00 0.00 38.17 2.69
454 455 9.742552 GAAAGTTGCGAGAGTAATTTAACTAAG 57.257 33.333 0.00 0.00 34.84 2.18
455 456 9.263538 TGAAAGTTGCGAGAGTAATTTAACTAA 57.736 29.630 0.00 0.00 34.84 2.24
456 457 8.821147 TGAAAGTTGCGAGAGTAATTTAACTA 57.179 30.769 0.00 0.00 34.84 2.24
457 458 7.724305 TGAAAGTTGCGAGAGTAATTTAACT 57.276 32.000 0.00 0.00 34.84 2.24
458 459 8.227791 TCATGAAAGTTGCGAGAGTAATTTAAC 58.772 33.333 0.00 0.00 34.84 2.01
459 460 8.317891 TCATGAAAGTTGCGAGAGTAATTTAA 57.682 30.769 0.00 0.00 34.84 1.52
460 461 7.899178 TCATGAAAGTTGCGAGAGTAATTTA 57.101 32.000 0.00 0.00 34.84 1.40
461 462 6.801539 TCATGAAAGTTGCGAGAGTAATTT 57.198 33.333 0.00 0.00 37.24 1.82
462 463 6.037610 GGATCATGAAAGTTGCGAGAGTAATT 59.962 38.462 0.00 0.00 38.17 1.40
463 464 5.525378 GGATCATGAAAGTTGCGAGAGTAAT 59.475 40.000 0.00 0.00 38.17 1.89
464 465 4.870426 GGATCATGAAAGTTGCGAGAGTAA 59.130 41.667 0.00 0.00 0.00 2.24
465 466 4.160439 AGGATCATGAAAGTTGCGAGAGTA 59.840 41.667 0.00 0.00 0.00 2.59
466 467 3.055530 AGGATCATGAAAGTTGCGAGAGT 60.056 43.478 0.00 0.00 0.00 3.24
467 468 3.529533 AGGATCATGAAAGTTGCGAGAG 58.470 45.455 0.00 0.00 0.00 3.20
468 469 3.055891 TGAGGATCATGAAAGTTGCGAGA 60.056 43.478 0.00 0.00 42.56 4.04
469 470 3.264947 TGAGGATCATGAAAGTTGCGAG 58.735 45.455 0.00 0.00 42.56 5.03
470 471 3.333029 TGAGGATCATGAAAGTTGCGA 57.667 42.857 0.00 0.00 42.56 5.10
483 484 2.379005 GGGGATTGGTTTGTGAGGATC 58.621 52.381 0.00 0.00 0.00 3.36
484 485 1.007118 GGGGGATTGGTTTGTGAGGAT 59.993 52.381 0.00 0.00 0.00 3.24
485 486 0.407918 GGGGGATTGGTTTGTGAGGA 59.592 55.000 0.00 0.00 0.00 3.71
486 487 0.114168 TGGGGGATTGGTTTGTGAGG 59.886 55.000 0.00 0.00 0.00 3.86
487 488 1.203050 AGTGGGGGATTGGTTTGTGAG 60.203 52.381 0.00 0.00 0.00 3.51
488 489 0.856982 AGTGGGGGATTGGTTTGTGA 59.143 50.000 0.00 0.00 0.00 3.58
489 490 2.167662 GTAGTGGGGGATTGGTTTGTG 58.832 52.381 0.00 0.00 0.00 3.33
490 491 2.070573 AGTAGTGGGGGATTGGTTTGT 58.929 47.619 0.00 0.00 0.00 2.83
491 492 2.899303 AGTAGTGGGGGATTGGTTTG 57.101 50.000 0.00 0.00 0.00 2.93
492 493 2.850568 CCTAGTAGTGGGGGATTGGTTT 59.149 50.000 0.00 0.00 0.00 3.27
493 494 2.046729 TCCTAGTAGTGGGGGATTGGTT 59.953 50.000 0.00 0.00 0.00 3.67
494 495 1.654997 TCCTAGTAGTGGGGGATTGGT 59.345 52.381 0.00 0.00 0.00 3.67
495 496 2.489528 TCCTAGTAGTGGGGGATTGG 57.510 55.000 0.00 0.00 0.00 3.16
496 497 4.855298 TTTTCCTAGTAGTGGGGGATTG 57.145 45.455 0.00 0.00 0.00 2.67
497 498 4.325109 GCTTTTTCCTAGTAGTGGGGGATT 60.325 45.833 0.00 0.00 0.00 3.01
498 499 3.202373 GCTTTTTCCTAGTAGTGGGGGAT 59.798 47.826 0.00 0.00 0.00 3.85
499 500 2.574824 GCTTTTTCCTAGTAGTGGGGGA 59.425 50.000 0.00 0.00 0.00 4.81
500 501 2.576648 AGCTTTTTCCTAGTAGTGGGGG 59.423 50.000 0.00 0.00 0.00 5.40
501 502 4.302559 AAGCTTTTTCCTAGTAGTGGGG 57.697 45.455 0.00 0.00 0.00 4.96
502 503 7.494952 GTGTATAAGCTTTTTCCTAGTAGTGGG 59.505 40.741 3.20 0.00 0.00 4.61
514 515 3.081804 AGCGCCTGTGTATAAGCTTTTT 58.918 40.909 3.20 0.00 0.00 1.94
609 610 4.261322 CCCGCGCTACTACTATCAACTTAA 60.261 45.833 5.56 0.00 0.00 1.85
646 647 5.583854 CACAGTAGAGACCGCTTAGTAGTAA 59.416 44.000 0.00 0.00 0.00 2.24
667 668 3.716195 CATGTCCCGGGGAGCACA 61.716 66.667 23.50 18.46 29.39 4.57
672 673 2.040359 TATGGCATGTCCCGGGGA 60.040 61.111 23.50 12.99 0.00 4.81
698 700 4.828829 AGTAGCGCAGGTTTATAACACTT 58.171 39.130 11.47 0.00 40.68 3.16
701 703 5.587388 AGTAGTAGCGCAGGTTTATAACA 57.413 39.130 11.47 0.00 40.68 2.41
713 715 4.026475 CAGCTATTCACAAAGTAGTAGCGC 60.026 45.833 0.00 0.00 39.47 5.92
753 755 6.210784 GTGTGGGAATATACTAGTAGCATGGA 59.789 42.308 8.85 0.00 0.00 3.41
852 855 2.137177 ATCGAGGGTTGGGTGTTGGG 62.137 60.000 0.00 0.00 0.00 4.12
853 856 0.676782 GATCGAGGGTTGGGTGTTGG 60.677 60.000 0.00 0.00 0.00 3.77
854 857 0.676782 GGATCGAGGGTTGGGTGTTG 60.677 60.000 0.00 0.00 0.00 3.33
855 858 1.131303 TGGATCGAGGGTTGGGTGTT 61.131 55.000 0.00 0.00 0.00 3.32
856 859 1.537889 TGGATCGAGGGTTGGGTGT 60.538 57.895 0.00 0.00 0.00 4.16
857 860 1.221840 CTGGATCGAGGGTTGGGTG 59.778 63.158 0.00 0.00 0.00 4.61
935 938 3.570550 CCCTCTATGTGCTAGTACTCACC 59.429 52.174 12.42 0.00 32.51 4.02
937 940 4.079958 TGTCCCTCTATGTGCTAGTACTCA 60.080 45.833 12.42 0.00 0.00 3.41
951 954 1.621377 GGAGGCTCCTGTCCCTCTA 59.379 63.158 26.44 0.00 45.54 2.43
997 1319 4.174129 GTGCGTGGCGGCCATTAC 62.174 66.667 26.68 19.35 35.28 1.89
1118 1450 2.990479 GGGGCAGGGTCAGTAGTG 59.010 66.667 0.00 0.00 0.00 2.74
1242 1882 4.111016 CCGACGCGAGGCTGTACA 62.111 66.667 15.93 0.00 36.51 2.90
1532 3330 5.212194 ACAAAGTGATACAACATTTGCGTC 58.788 37.500 0.00 0.00 34.90 5.19
1600 3654 7.119262 CCAAATTCTACAACACTTCCGAAGTAT 59.881 37.037 13.47 0.00 40.46 2.12
1686 3740 9.226345 CTTAGTCTTTGCTTTGAAAAACTACAG 57.774 33.333 0.00 0.00 0.00 2.74
1687 3741 8.188139 CCTTAGTCTTTGCTTTGAAAAACTACA 58.812 33.333 0.00 0.00 0.00 2.74
1690 3744 6.042777 GCCTTAGTCTTTGCTTTGAAAAACT 58.957 36.000 0.00 0.00 0.00 2.66
1691 3745 5.234329 GGCCTTAGTCTTTGCTTTGAAAAAC 59.766 40.000 0.00 0.00 0.00 2.43
1692 3746 5.128663 AGGCCTTAGTCTTTGCTTTGAAAAA 59.871 36.000 0.00 0.00 0.00 1.94
1693 3747 4.649218 AGGCCTTAGTCTTTGCTTTGAAAA 59.351 37.500 0.00 0.00 0.00 2.29
1694 3748 4.215109 AGGCCTTAGTCTTTGCTTTGAAA 58.785 39.130 0.00 0.00 0.00 2.69
1695 3749 3.832527 AGGCCTTAGTCTTTGCTTTGAA 58.167 40.909 0.00 0.00 0.00 2.69
1755 3902 0.508213 GCCAAACGCAATTGCTTGTC 59.492 50.000 26.86 12.58 39.32 3.18
1803 3952 3.317150 GCCAAACACATAGGCTGTTTTC 58.683 45.455 0.00 0.00 44.92 2.29
1817 3966 4.342378 TGGTAAAATAGCACTTGCCAAACA 59.658 37.500 0.00 0.00 43.38 2.83
1967 4178 3.596214 ACCCATTACACATGACTCGAAC 58.404 45.455 0.00 0.00 0.00 3.95
1968 4179 3.973206 ACCCATTACACATGACTCGAA 57.027 42.857 0.00 0.00 0.00 3.71
1969 4180 4.097437 GTCTACCCATTACACATGACTCGA 59.903 45.833 0.00 0.00 0.00 4.04
1970 4181 4.142249 TGTCTACCCATTACACATGACTCG 60.142 45.833 0.00 0.00 0.00 4.18
1971 4182 5.339008 TGTCTACCCATTACACATGACTC 57.661 43.478 0.00 0.00 0.00 3.36
1972 4183 5.755409 TTGTCTACCCATTACACATGACT 57.245 39.130 0.00 0.00 0.00 3.41
1973 4184 6.037172 GTCATTGTCTACCCATTACACATGAC 59.963 42.308 0.00 0.00 36.16 3.06
1974 4185 6.112734 GTCATTGTCTACCCATTACACATGA 58.887 40.000 0.00 0.00 0.00 3.07
1975 4186 5.296780 GGTCATTGTCTACCCATTACACATG 59.703 44.000 0.00 0.00 0.00 3.21
1976 4187 5.045213 TGGTCATTGTCTACCCATTACACAT 60.045 40.000 0.00 0.00 34.69 3.21
1977 4188 4.287326 TGGTCATTGTCTACCCATTACACA 59.713 41.667 0.00 0.00 34.69 3.72
1978 4189 4.839121 TGGTCATTGTCTACCCATTACAC 58.161 43.478 0.00 0.00 34.69 2.90
1979 4190 4.780554 TCTGGTCATTGTCTACCCATTACA 59.219 41.667 0.00 0.00 34.69 2.41
1980 4191 5.353394 TCTGGTCATTGTCTACCCATTAC 57.647 43.478 0.00 0.00 34.69 1.89
1981 4192 7.512402 TCATATCTGGTCATTGTCTACCCATTA 59.488 37.037 0.00 0.00 34.69 1.90
1982 4193 6.329986 TCATATCTGGTCATTGTCTACCCATT 59.670 38.462 0.00 0.00 34.69 3.16
1983 4194 5.846164 TCATATCTGGTCATTGTCTACCCAT 59.154 40.000 0.00 0.00 34.69 4.00
1984 4195 5.215845 TCATATCTGGTCATTGTCTACCCA 58.784 41.667 0.00 0.00 34.69 4.51
1985 4196 5.279708 CCTCATATCTGGTCATTGTCTACCC 60.280 48.000 0.00 0.00 34.69 3.69
1986 4197 5.279708 CCCTCATATCTGGTCATTGTCTACC 60.280 48.000 0.00 0.00 36.24 3.18
1987 4198 5.305644 ACCCTCATATCTGGTCATTGTCTAC 59.694 44.000 0.00 0.00 0.00 2.59
1988 4199 5.467738 ACCCTCATATCTGGTCATTGTCTA 58.532 41.667 0.00 0.00 0.00 2.59
1989 4200 4.302067 ACCCTCATATCTGGTCATTGTCT 58.698 43.478 0.00 0.00 0.00 3.41
1990 4201 4.696479 ACCCTCATATCTGGTCATTGTC 57.304 45.455 0.00 0.00 0.00 3.18
1991 4202 4.968719 TGTACCCTCATATCTGGTCATTGT 59.031 41.667 0.00 0.00 33.55 2.71
1992 4203 5.551305 TGTACCCTCATATCTGGTCATTG 57.449 43.478 0.00 0.00 33.55 2.82
1993 4204 5.905331 TCTTGTACCCTCATATCTGGTCATT 59.095 40.000 0.00 0.00 33.55 2.57
1994 4205 5.467738 TCTTGTACCCTCATATCTGGTCAT 58.532 41.667 0.00 0.00 33.55 3.06
1995 4206 4.878968 TCTTGTACCCTCATATCTGGTCA 58.121 43.478 0.00 0.00 33.55 4.02
1996 4207 6.226787 CAATCTTGTACCCTCATATCTGGTC 58.773 44.000 0.00 0.00 33.55 4.02
1997 4208 5.455326 GCAATCTTGTACCCTCATATCTGGT 60.455 44.000 0.00 0.00 36.15 4.00
1998 4209 4.999950 GCAATCTTGTACCCTCATATCTGG 59.000 45.833 0.00 0.00 0.00 3.86
1999 4210 5.862845 AGCAATCTTGTACCCTCATATCTG 58.137 41.667 0.00 0.00 0.00 2.90
2000 4211 7.013220 TCTAGCAATCTTGTACCCTCATATCT 58.987 38.462 0.00 0.00 0.00 1.98
2001 4212 7.233389 TCTAGCAATCTTGTACCCTCATATC 57.767 40.000 0.00 0.00 0.00 1.63
2002 4213 7.618019 TTCTAGCAATCTTGTACCCTCATAT 57.382 36.000 0.00 0.00 0.00 1.78
2003 4214 7.432148 TTTCTAGCAATCTTGTACCCTCATA 57.568 36.000 0.00 0.00 0.00 2.15
2004 4215 5.957771 TTCTAGCAATCTTGTACCCTCAT 57.042 39.130 0.00 0.00 0.00 2.90
2005 4216 5.755409 TTTCTAGCAATCTTGTACCCTCA 57.245 39.130 0.00 0.00 0.00 3.86
2006 4217 6.174049 ACTTTTCTAGCAATCTTGTACCCTC 58.826 40.000 0.00 0.00 0.00 4.30
2007 4218 6.128138 ACTTTTCTAGCAATCTTGTACCCT 57.872 37.500 0.00 0.00 0.00 4.34
2008 4219 7.389607 TGTTACTTTTCTAGCAATCTTGTACCC 59.610 37.037 0.00 0.00 0.00 3.69
2009 4220 8.228464 GTGTTACTTTTCTAGCAATCTTGTACC 58.772 37.037 0.00 0.00 0.00 3.34
2010 4221 7.950496 CGTGTTACTTTTCTAGCAATCTTGTAC 59.050 37.037 0.00 0.00 0.00 2.90
2011 4222 7.654520 ACGTGTTACTTTTCTAGCAATCTTGTA 59.345 33.333 0.00 0.00 0.00 2.41
2012 4223 6.482308 ACGTGTTACTTTTCTAGCAATCTTGT 59.518 34.615 0.00 0.00 0.00 3.16
2013 4224 6.792250 CACGTGTTACTTTTCTAGCAATCTTG 59.208 38.462 7.58 0.00 0.00 3.02
2014 4225 6.565999 GCACGTGTTACTTTTCTAGCAATCTT 60.566 38.462 18.38 0.00 0.00 2.40
2015 4226 5.107065 GCACGTGTTACTTTTCTAGCAATCT 60.107 40.000 18.38 0.00 0.00 2.40
2016 4227 5.080068 GCACGTGTTACTTTTCTAGCAATC 58.920 41.667 18.38 0.00 0.00 2.67
2017 4228 4.083484 GGCACGTGTTACTTTTCTAGCAAT 60.083 41.667 18.38 0.00 0.00 3.56
2018 4229 3.249080 GGCACGTGTTACTTTTCTAGCAA 59.751 43.478 18.38 0.00 0.00 3.91
2019 4230 2.803956 GGCACGTGTTACTTTTCTAGCA 59.196 45.455 18.38 0.00 0.00 3.49
2020 4231 2.159037 GGGCACGTGTTACTTTTCTAGC 59.841 50.000 18.38 0.00 0.00 3.42
2021 4232 3.395639 TGGGCACGTGTTACTTTTCTAG 58.604 45.455 18.38 0.00 0.00 2.43
2022 4233 3.395639 CTGGGCACGTGTTACTTTTCTA 58.604 45.455 18.38 0.00 0.00 2.10
2023 4234 2.218603 CTGGGCACGTGTTACTTTTCT 58.781 47.619 18.38 0.00 0.00 2.52
2024 4235 1.334689 GCTGGGCACGTGTTACTTTTC 60.335 52.381 18.38 0.00 0.00 2.29
2025 4236 0.666374 GCTGGGCACGTGTTACTTTT 59.334 50.000 18.38 0.00 0.00 2.27
2026 4237 1.170290 GGCTGGGCACGTGTTACTTT 61.170 55.000 18.38 0.00 0.00 2.66
2027 4238 1.599797 GGCTGGGCACGTGTTACTT 60.600 57.895 18.38 0.00 0.00 2.24
2028 4239 2.032071 GGCTGGGCACGTGTTACT 59.968 61.111 18.38 0.00 0.00 2.24
2029 4240 3.419759 CGGCTGGGCACGTGTTAC 61.420 66.667 18.38 8.30 0.00 2.50
2050 4261 4.545706 TTCTATGGCTGCCGGCGG 62.546 66.667 31.57 31.57 42.94 6.13
2051 4262 2.969238 CTTCTATGGCTGCCGGCG 60.969 66.667 23.90 17.75 42.94 6.46
2052 4263 2.592861 CCTTCTATGGCTGCCGGC 60.593 66.667 22.73 22.73 40.90 6.13
2058 4269 3.718956 AGGCAATTAGTCCTTCTATGGCT 59.281 43.478 0.00 0.00 38.69 4.75
2076 4287 8.318412 TCTGATTATTAGTGTTTCAGTTAGGCA 58.682 33.333 0.00 0.00 36.17 4.75
2077 4288 8.718102 TCTGATTATTAGTGTTTCAGTTAGGC 57.282 34.615 0.00 0.00 36.17 3.93
2209 4420 6.374894 ACAGTTCTAACGTCTAGCTACAGATT 59.625 38.462 0.00 0.00 0.00 2.40
2440 4654 8.090831 TGCTGTGACTGAAAGATCATATATACC 58.909 37.037 0.00 0.00 37.43 2.73
2465 6888 7.065923 GGGAGCTTTAGTTCTAAAATACTGGTG 59.934 40.741 6.49 0.00 0.00 4.17
2466 6889 7.110810 GGGAGCTTTAGTTCTAAAATACTGGT 58.889 38.462 6.49 1.30 0.00 4.00
2508 6931 8.918961 AAACATCATGAAAGAAAACACGTTTA 57.081 26.923 0.00 0.00 31.63 2.01
2547 6970 7.272731 TGTCGACAGATATTTTCTAGTGTTTCG 59.727 37.037 15.76 0.00 31.77 3.46
2936 7363 8.581253 AACTCCTCATAAATTCCTAAAACCTG 57.419 34.615 0.00 0.00 0.00 4.00
2937 7364 8.615705 AGAACTCCTCATAAATTCCTAAAACCT 58.384 33.333 0.00 0.00 0.00 3.50
2938 7365 8.678199 CAGAACTCCTCATAAATTCCTAAAACC 58.322 37.037 0.00 0.00 0.00 3.27
3045 7475 9.753674 TCAAGGAAATAAGTTCATGTAGGATTT 57.246 29.630 0.00 0.00 38.06 2.17
3046 7476 9.401058 CTCAAGGAAATAAGTTCATGTAGGATT 57.599 33.333 0.00 0.00 38.06 3.01
3675 8157 2.960384 TCAGCATTTGCATTGATAGGGG 59.040 45.455 5.20 0.00 45.16 4.79
3806 8289 7.496529 TTCTTCAGAAGAATGACACGAAAAT 57.503 32.000 19.96 0.00 42.31 1.82
4004 8489 4.154347 CTCTCAGGCTCGGGGTGC 62.154 72.222 0.00 0.00 0.00 5.01
4390 8875 7.325660 TGCCATGCAAATTCAAAACTTTAAA 57.674 28.000 0.00 0.00 34.76 1.52
4391 8876 6.932356 TGCCATGCAAATTCAAAACTTTAA 57.068 29.167 0.00 0.00 34.76 1.52
4616 9127 1.133982 CTGTGTCTATCAGCGAGCAGT 59.866 52.381 0.00 0.00 0.00 4.40
4617 9128 1.837648 CTGTGTCTATCAGCGAGCAG 58.162 55.000 0.00 0.00 0.00 4.24
4618 9129 0.179127 GCTGTGTCTATCAGCGAGCA 60.179 55.000 2.28 0.00 46.39 4.26
4624 9135 8.012809 CGAATTAGTAGTAGCTGTGTCTATCAG 58.987 40.741 0.00 0.00 36.18 2.90
4665 9197 5.304614 ACCCACGCTACTGATATTTCATACT 59.695 40.000 0.00 0.00 0.00 2.12
4669 9201 3.431626 CCACCCACGCTACTGATATTTCA 60.432 47.826 0.00 0.00 0.00 2.69
4676 9208 2.920384 TGCCACCCACGCTACTGA 60.920 61.111 0.00 0.00 0.00 3.41
4701 9272 2.008752 GGTTAAACCCGCGCTACTAA 57.991 50.000 5.56 0.00 30.04 2.24
4782 9368 7.228314 ACTAGCAGTGTGAGTAAATGACTAA 57.772 36.000 0.00 0.00 39.06 2.24
4794 9381 4.351874 AAAAAGGCTACTAGCAGTGTGA 57.648 40.909 10.27 0.00 44.75 3.58
4870 9457 1.276140 TACCTTTGATCACCCCGGGG 61.276 60.000 39.18 39.18 42.03 5.73
4940 9534 4.701651 CACCCTCAAAGATTGCATGAGTAA 59.298 41.667 12.12 0.00 39.10 2.24
5023 9622 6.456853 GCATTATGAGTGCGAACTATCAACAA 60.457 38.462 0.00 0.00 32.29 2.83
5031 9630 2.698855 AGGCATTATGAGTGCGAACT 57.301 45.000 0.00 0.00 43.40 3.01
5032 9631 5.696724 ACTATTAGGCATTATGAGTGCGAAC 59.303 40.000 0.00 0.00 43.40 3.95
5047 9652 5.066246 AGTGTGACGAGTAGAACTATTAGGC 59.934 44.000 0.00 0.00 0.00 3.93
5104 9709 5.997129 TCTTTTGAGTGATTGCTATGTGTGA 59.003 36.000 0.00 0.00 0.00 3.58
5123 9729 8.032451 TGTTTTCTTCGTTCTTTTGGATCTTTT 58.968 29.630 0.00 0.00 0.00 2.27
5153 9760 5.776173 TTGCCTATTTTCGACTTTTTCCA 57.224 34.783 0.00 0.00 0.00 3.53
5160 9767 5.063880 AGAGTTGTTTGCCTATTTTCGACT 58.936 37.500 0.00 0.00 0.00 4.18
5161 9768 5.358298 AGAGTTGTTTGCCTATTTTCGAC 57.642 39.130 0.00 0.00 0.00 4.20
5164 9771 5.829233 GCAAGAGTTGTTTGCCTATTTTC 57.171 39.130 0.00 0.00 43.88 2.29
5177 9784 6.464895 TTGTTTTTCTGTTTGCAAGAGTTG 57.535 33.333 0.00 0.00 0.00 3.16
5267 9874 8.630037 ACTCCGATTTAAGTGATTCTTTTTGTT 58.370 29.630 0.00 0.00 37.56 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.