Multiple sequence alignment - TraesCS2D01G476300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G476300 chr2D 100.000 2645 0 0 1 2645 578702645 578705289 0.000000e+00 4885
1 TraesCS2D01G476300 chr2D 75.467 428 86 18 1771 2186 578878252 578878672 9.660000e-45 191
2 TraesCS2D01G476300 chr2B 89.123 2179 117 63 1 2117 695593550 695595670 0.000000e+00 2601
3 TraesCS2D01G476300 chr2B 88.172 93 6 4 2555 2643 695595670 695595761 3.600000e-19 106
4 TraesCS2D01G476300 chr2A 87.086 1510 96 48 539 2012 716234035 716235481 0.000000e+00 1616
5 TraesCS2D01G476300 chr2A 93.304 224 10 4 298 521 716233828 716234046 2.540000e-85 326
6 TraesCS2D01G476300 chr2A 89.706 204 9 6 3 205 716233612 716233804 1.570000e-62 250
7 TraesCS2D01G476300 chr2A 90.323 93 5 4 2552 2643 716235709 716235798 4.620000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G476300 chr2D 578702645 578705289 2644 False 4885.00 4885 100.00000 1 2645 1 chr2D.!!$F1 2644
1 TraesCS2D01G476300 chr2B 695593550 695595761 2211 False 1353.50 2601 88.64750 1 2643 2 chr2B.!!$F1 2642
2 TraesCS2D01G476300 chr2A 716233612 716235798 2186 False 577.75 1616 90.10475 3 2643 4 chr2A.!!$F1 2640

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
930 987 0.099259 CCTGTACATGCACGCCAATG 59.901 55.0 0.0 0.0 0.0 2.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2387 2616 0.032403 CGTTGACCGTTGGACACCTA 59.968 55.0 0.0 0.0 0.0 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 1.730064 CATCGGCCCGTAAATTATCGG 59.270 52.381 1.63 12.42 45.42 4.18
63 64 5.637104 CGTAAATTATCGGAAGTCTGTGG 57.363 43.478 0.00 0.00 0.00 4.17
64 65 4.025979 CGTAAATTATCGGAAGTCTGTGGC 60.026 45.833 0.00 0.00 0.00 5.01
137 139 7.464178 GCATCATTGTCTTTCTTCATTTGCATC 60.464 37.037 0.00 0.00 0.00 3.91
207 210 7.490079 TGCTTGATTGATTCAGTGAAATAATGC 59.510 33.333 10.14 12.44 35.27 3.56
219 222 1.392589 AATAATGCCCTCTGCCAACG 58.607 50.000 0.00 0.00 40.16 4.10
292 295 1.804326 GGCTGCGTACACGGTACAG 60.804 63.158 12.62 4.00 40.23 2.74
293 296 2.442188 GCTGCGTACACGGTACAGC 61.442 63.158 14.13 14.13 42.37 4.40
294 297 2.126773 TGCGTACACGGTACAGCG 60.127 61.111 12.62 0.00 40.23 5.18
295 298 2.877582 GCGTACACGGTACAGCGG 60.878 66.667 5.75 0.00 40.23 5.52
320 323 1.713078 AGGAAACTTGAGGCTGGGATT 59.287 47.619 0.00 0.00 37.44 3.01
364 367 5.283457 ACTTGGTGCTCTGGATATTCTAC 57.717 43.478 0.00 0.00 0.00 2.59
365 368 4.716784 ACTTGGTGCTCTGGATATTCTACA 59.283 41.667 0.00 0.00 0.00 2.74
366 369 4.944619 TGGTGCTCTGGATATTCTACAG 57.055 45.455 0.00 0.00 0.00 2.74
367 370 4.290093 TGGTGCTCTGGATATTCTACAGT 58.710 43.478 0.00 0.00 34.02 3.55
368 371 5.454966 TGGTGCTCTGGATATTCTACAGTA 58.545 41.667 0.00 0.00 34.02 2.74
369 372 6.077993 TGGTGCTCTGGATATTCTACAGTAT 58.922 40.000 0.00 0.00 34.02 2.12
370 373 6.209589 TGGTGCTCTGGATATTCTACAGTATC 59.790 42.308 0.00 0.00 34.02 2.24
501 504 4.466827 TGTCTCACACTCCTTGTACACTA 58.533 43.478 0.00 0.00 35.67 2.74
502 505 4.891168 TGTCTCACACTCCTTGTACACTAA 59.109 41.667 0.00 0.00 35.67 2.24
522 525 3.032265 ACTTTCCAGCCTTTTGGTCTT 57.968 42.857 0.00 0.00 42.99 3.01
523 526 3.374764 ACTTTCCAGCCTTTTGGTCTTT 58.625 40.909 0.00 0.00 42.99 2.52
596 603 4.072839 AGGCCAGTTGAGTAGTAAAAAGC 58.927 43.478 5.01 0.00 0.00 3.51
602 609 6.073548 CCAGTTGAGTAGTAAAAAGCAGACAG 60.074 42.308 0.00 0.00 0.00 3.51
606 613 7.941795 TGAGTAGTAAAAAGCAGACAGTTAC 57.058 36.000 0.00 0.00 0.00 2.50
609 616 9.688592 GAGTAGTAAAAAGCAGACAGTTACTTA 57.311 33.333 0.00 0.00 36.61 2.24
656 665 6.980978 ACCAGATGTACGATAATTTCAGACAG 59.019 38.462 0.00 0.00 0.00 3.51
667 676 8.276325 CGATAATTTCAGACAGCTAATAACCAC 58.724 37.037 0.00 0.00 0.00 4.16
671 680 5.435686 TCAGACAGCTAATAACCACCAAT 57.564 39.130 0.00 0.00 0.00 3.16
702 729 6.954616 TTTTGCTCGAAATCGTCTTGTATA 57.045 33.333 2.41 0.00 40.80 1.47
703 730 5.944049 TTGCTCGAAATCGTCTTGTATAC 57.056 39.130 2.41 0.00 40.80 1.47
704 731 4.989044 TGCTCGAAATCGTCTTGTATACA 58.011 39.130 0.08 0.08 40.80 2.29
705 732 5.034797 TGCTCGAAATCGTCTTGTATACAG 58.965 41.667 5.56 1.19 40.80 2.74
706 733 5.035443 GCTCGAAATCGTCTTGTATACAGT 58.965 41.667 5.56 0.00 40.80 3.55
707 734 5.515626 GCTCGAAATCGTCTTGTATACAGTT 59.484 40.000 5.56 0.00 40.80 3.16
708 735 6.690098 GCTCGAAATCGTCTTGTATACAGTTA 59.310 38.462 5.56 0.00 40.80 2.24
709 736 7.305304 GCTCGAAATCGTCTTGTATACAGTTAC 60.305 40.741 5.56 5.17 40.80 2.50
758 815 1.429463 CCAACCGAAAGACGAGGAAG 58.571 55.000 0.00 0.00 45.77 3.46
761 818 1.211969 CCGAAAGACGAGGAAGCGA 59.788 57.895 0.00 0.00 45.77 4.93
762 819 0.179134 CCGAAAGACGAGGAAGCGAT 60.179 55.000 0.00 0.00 45.77 4.58
770 827 1.001597 ACGAGGAAGCGATCGGAATAC 60.002 52.381 18.30 0.00 43.12 1.89
930 987 0.099259 CCTGTACATGCACGCCAATG 59.901 55.000 0.00 0.00 0.00 2.82
931 988 0.523968 CTGTACATGCACGCCAATGC 60.524 55.000 0.00 0.00 46.32 3.56
1090 1159 2.825836 CCCGCTGCACCAAGATCC 60.826 66.667 0.00 0.00 0.00 3.36
1662 1737 1.077716 GGTGTAATCCGCCTGCCTT 60.078 57.895 0.00 0.00 40.81 4.35
1663 1738 0.679960 GGTGTAATCCGCCTGCCTTT 60.680 55.000 0.00 0.00 40.81 3.11
1664 1739 0.733150 GTGTAATCCGCCTGCCTTTC 59.267 55.000 0.00 0.00 0.00 2.62
1665 1740 0.326595 TGTAATCCGCCTGCCTTTCA 59.673 50.000 0.00 0.00 0.00 2.69
1666 1741 0.733150 GTAATCCGCCTGCCTTTCAC 59.267 55.000 0.00 0.00 0.00 3.18
1667 1742 0.326595 TAATCCGCCTGCCTTTCACA 59.673 50.000 0.00 0.00 0.00 3.58
1668 1743 0.323725 AATCCGCCTGCCTTTCACAT 60.324 50.000 0.00 0.00 0.00 3.21
1669 1744 0.546122 ATCCGCCTGCCTTTCACATA 59.454 50.000 0.00 0.00 0.00 2.29
1671 1746 1.173043 CCGCCTGCCTTTCACATAAA 58.827 50.000 0.00 0.00 0.00 1.40
1673 1748 2.029470 CCGCCTGCCTTTCACATAAAAA 60.029 45.455 0.00 0.00 0.00 1.94
1674 1749 3.244976 CGCCTGCCTTTCACATAAAAAG 58.755 45.455 0.00 0.00 34.25 2.27
1677 1752 4.809673 CCTGCCTTTCACATAAAAAGACC 58.190 43.478 0.00 0.00 36.09 3.85
1679 1754 5.221422 CCTGCCTTTCACATAAAAAGACCAA 60.221 40.000 0.00 0.00 36.09 3.67
1680 1755 6.227298 TGCCTTTCACATAAAAAGACCAAA 57.773 33.333 0.00 0.00 36.09 3.28
1681 1756 6.825610 TGCCTTTCACATAAAAAGACCAAAT 58.174 32.000 0.00 0.00 36.09 2.32
1682 1757 6.705381 TGCCTTTCACATAAAAAGACCAAATG 59.295 34.615 0.00 0.00 36.09 2.32
1683 1758 6.928492 GCCTTTCACATAAAAAGACCAAATGA 59.072 34.615 0.00 0.00 36.09 2.57
1684 1759 7.116805 GCCTTTCACATAAAAAGACCAAATGAG 59.883 37.037 0.00 0.00 36.09 2.90
1685 1760 8.143835 CCTTTCACATAAAAAGACCAAATGAGT 58.856 33.333 0.00 0.00 36.09 3.41
1687 1762 9.959749 TTTCACATAAAAAGACCAAATGAGTAC 57.040 29.630 0.00 0.00 0.00 2.73
1688 1763 8.684386 TCACATAAAAAGACCAAATGAGTACA 57.316 30.769 0.00 0.00 0.00 2.90
1689 1764 9.295825 TCACATAAAAAGACCAAATGAGTACAT 57.704 29.630 0.00 0.00 38.50 2.29
1693 1768 9.747898 ATAAAAAGACCAAATGAGTACATACCA 57.252 29.630 0.00 0.00 35.50 3.25
1694 1769 7.687941 AAAAGACCAAATGAGTACATACCAG 57.312 36.000 0.00 0.00 35.50 4.00
1695 1770 4.770795 AGACCAAATGAGTACATACCAGC 58.229 43.478 0.00 0.00 35.50 4.85
1696 1771 4.225042 AGACCAAATGAGTACATACCAGCA 59.775 41.667 0.00 0.00 35.50 4.41
1697 1772 4.917385 ACCAAATGAGTACATACCAGCAA 58.083 39.130 0.00 0.00 35.50 3.91
1698 1773 4.700213 ACCAAATGAGTACATACCAGCAAC 59.300 41.667 0.00 0.00 35.50 4.17
1699 1774 4.699735 CCAAATGAGTACATACCAGCAACA 59.300 41.667 0.00 0.00 35.50 3.33
1700 1775 5.182950 CCAAATGAGTACATACCAGCAACAA 59.817 40.000 0.00 0.00 35.50 2.83
1701 1776 5.880054 AATGAGTACATACCAGCAACAAC 57.120 39.130 0.00 0.00 35.50 3.32
1702 1777 4.617253 TGAGTACATACCAGCAACAACT 57.383 40.909 0.00 0.00 0.00 3.16
1703 1778 5.731957 TGAGTACATACCAGCAACAACTA 57.268 39.130 0.00 0.00 0.00 2.24
1704 1779 5.720202 TGAGTACATACCAGCAACAACTAG 58.280 41.667 0.00 0.00 0.00 2.57
1705 1780 4.504858 AGTACATACCAGCAACAACTAGC 58.495 43.478 0.00 0.00 0.00 3.42
1706 1781 2.346803 ACATACCAGCAACAACTAGCG 58.653 47.619 0.00 0.00 35.48 4.26
1707 1782 1.665679 CATACCAGCAACAACTAGCGG 59.334 52.381 0.00 0.00 35.48 5.52
1708 1783 0.672401 TACCAGCAACAACTAGCGGC 60.672 55.000 0.00 0.00 35.48 6.53
1737 1815 9.559732 CATTCCAATGTAATCCTACAATACAGA 57.440 33.333 0.00 0.00 41.36 3.41
1830 1934 6.341316 TCACCTGTTGCTTCTCTGTATAATC 58.659 40.000 0.00 0.00 0.00 1.75
1905 2010 8.672823 CTCATTGATGGATGAGTTCTGAATAA 57.327 34.615 6.70 0.00 45.08 1.40
1909 2014 9.863650 ATTGATGGATGAGTTCTGAATAAGAAT 57.136 29.630 0.00 0.00 46.53 2.40
1944 2049 4.675029 CAACGCCGACTCCCCGTT 62.675 66.667 0.00 0.00 44.92 4.44
1961 2066 1.611673 CGTTCATCCTTCCTGCCTTGT 60.612 52.381 0.00 0.00 0.00 3.16
1969 2074 2.555757 CCTTCCTGCCTTGTCAAAGAAG 59.444 50.000 0.00 0.00 35.19 2.85
1970 2075 2.276732 TCCTGCCTTGTCAAAGAAGG 57.723 50.000 1.95 1.95 42.68 3.46
2029 2154 2.715737 GCCTCTAGCTCATTCCTACG 57.284 55.000 0.00 0.00 38.99 3.51
2032 2157 3.366883 GCCTCTAGCTCATTCCTACGATG 60.367 52.174 0.00 0.00 38.99 3.84
2034 2159 3.222603 TCTAGCTCATTCCTACGATGCA 58.777 45.455 0.00 0.00 0.00 3.96
2040 2165 4.321601 GCTCATTCCTACGATGCAGAGTAT 60.322 45.833 4.78 0.00 0.00 2.12
2041 2166 5.106118 GCTCATTCCTACGATGCAGAGTATA 60.106 44.000 4.78 0.00 0.00 1.47
2042 2167 6.255596 TCATTCCTACGATGCAGAGTATAC 57.744 41.667 4.78 0.00 0.00 1.47
2043 2168 4.744136 TTCCTACGATGCAGAGTATACG 57.256 45.455 4.78 0.00 0.00 3.06
2044 2169 3.736720 TCCTACGATGCAGAGTATACGT 58.263 45.455 4.78 0.00 37.68 3.57
2045 2170 4.886579 TCCTACGATGCAGAGTATACGTA 58.113 43.478 0.00 0.00 35.66 3.57
2048 2173 5.178996 CCTACGATGCAGAGTATACGTAGTT 59.821 44.000 18.27 0.00 46.04 2.24
2050 2175 6.609237 ACGATGCAGAGTATACGTAGTTAA 57.391 37.500 0.08 0.00 37.78 2.01
2051 2176 6.425504 ACGATGCAGAGTATACGTAGTTAAC 58.574 40.000 0.08 0.00 37.78 2.01
2052 2177 6.037500 ACGATGCAGAGTATACGTAGTTAACA 59.962 38.462 8.61 0.00 37.78 2.41
2053 2178 7.076362 CGATGCAGAGTATACGTAGTTAACAT 58.924 38.462 8.61 0.00 37.78 2.71
2054 2179 7.268659 CGATGCAGAGTATACGTAGTTAACATC 59.731 40.741 8.61 7.41 37.78 3.06
2055 2180 7.324354 TGCAGAGTATACGTAGTTAACATCA 57.676 36.000 8.61 0.00 37.78 3.07
2117 2346 9.405083 CTAATTAACACGAAGTAAATACTTGCG 57.595 33.333 10.41 14.16 45.84 4.85
2122 2351 3.682858 ACGAAGTAAATACTTGCGTGCAT 59.317 39.130 19.90 5.70 45.84 3.96
2126 2355 6.489127 AAGTAAATACTTGCGTGCATACAA 57.511 33.333 5.07 0.00 44.30 2.41
2128 2357 7.083875 AGTAAATACTTGCGTGCATACAAAT 57.916 32.000 0.00 0.00 31.13 2.32
2129 2358 8.203937 AGTAAATACTTGCGTGCATACAAATA 57.796 30.769 0.00 1.41 31.13 1.40
2130 2359 8.120465 AGTAAATACTTGCGTGCATACAAATAC 58.880 33.333 0.00 0.00 31.13 1.89
2131 2360 6.677781 AATACTTGCGTGCATACAAATACT 57.322 33.333 0.00 0.00 0.00 2.12
2132 2361 4.340894 ACTTGCGTGCATACAAATACTG 57.659 40.909 0.00 0.00 0.00 2.74
2133 2362 3.126858 ACTTGCGTGCATACAAATACTGG 59.873 43.478 0.00 0.00 0.00 4.00
2134 2363 2.013400 TGCGTGCATACAAATACTGGG 58.987 47.619 0.00 0.00 0.00 4.45
2135 2364 2.014128 GCGTGCATACAAATACTGGGT 58.986 47.619 0.00 0.00 0.00 4.51
2136 2365 2.422127 GCGTGCATACAAATACTGGGTT 59.578 45.455 0.00 0.00 0.00 4.11
2137 2366 3.623960 GCGTGCATACAAATACTGGGTTA 59.376 43.478 0.00 0.00 0.00 2.85
2138 2367 4.260620 GCGTGCATACAAATACTGGGTTAG 60.261 45.833 0.00 0.00 0.00 2.34
2139 2368 4.260620 CGTGCATACAAATACTGGGTTAGC 60.261 45.833 0.00 0.00 0.00 3.09
2140 2369 4.881850 GTGCATACAAATACTGGGTTAGCT 59.118 41.667 0.00 0.00 0.00 3.32
2141 2370 5.357032 GTGCATACAAATACTGGGTTAGCTT 59.643 40.000 0.00 0.00 0.00 3.74
2142 2371 6.540914 GTGCATACAAATACTGGGTTAGCTTA 59.459 38.462 0.00 0.00 0.00 3.09
2143 2372 7.066525 GTGCATACAAATACTGGGTTAGCTTAA 59.933 37.037 0.00 0.00 0.00 1.85
2144 2373 7.777910 TGCATACAAATACTGGGTTAGCTTAAT 59.222 33.333 0.00 0.00 0.00 1.40
2145 2374 8.076178 GCATACAAATACTGGGTTAGCTTAATG 58.924 37.037 0.00 0.00 0.00 1.90
2146 2375 9.120538 CATACAAATACTGGGTTAGCTTAATGT 57.879 33.333 0.00 0.00 0.00 2.71
2147 2376 9.695155 ATACAAATACTGGGTTAGCTTAATGTT 57.305 29.630 0.00 0.00 0.00 2.71
2148 2377 8.417273 ACAAATACTGGGTTAGCTTAATGTTT 57.583 30.769 0.00 0.00 0.00 2.83
2149 2378 8.866093 ACAAATACTGGGTTAGCTTAATGTTTT 58.134 29.630 0.00 0.00 0.00 2.43
2150 2379 9.705290 CAAATACTGGGTTAGCTTAATGTTTTT 57.295 29.630 0.00 0.00 0.00 1.94
2151 2380 9.705290 AAATACTGGGTTAGCTTAATGTTTTTG 57.295 29.630 0.00 0.00 0.00 2.44
2152 2381 6.724893 ACTGGGTTAGCTTAATGTTTTTGT 57.275 33.333 0.00 0.00 0.00 2.83
2153 2382 7.826918 ACTGGGTTAGCTTAATGTTTTTGTA 57.173 32.000 0.00 0.00 0.00 2.41
2154 2383 8.240267 ACTGGGTTAGCTTAATGTTTTTGTAA 57.760 30.769 0.00 0.00 0.00 2.41
2155 2384 8.357402 ACTGGGTTAGCTTAATGTTTTTGTAAG 58.643 33.333 0.00 0.00 0.00 2.34
2156 2385 8.240267 TGGGTTAGCTTAATGTTTTTGTAAGT 57.760 30.769 0.00 0.00 0.00 2.24
2157 2386 8.697292 TGGGTTAGCTTAATGTTTTTGTAAGTT 58.303 29.630 0.00 0.00 0.00 2.66
2158 2387 9.537192 GGGTTAGCTTAATGTTTTTGTAAGTTT 57.463 29.630 0.00 0.00 0.00 2.66
2190 2419 5.646606 TGTTTGTTTCTAGTTGGTTTCAGC 58.353 37.500 0.00 0.00 0.00 4.26
2191 2420 5.417580 TGTTTGTTTCTAGTTGGTTTCAGCT 59.582 36.000 0.00 0.00 38.09 4.24
2192 2421 6.600032 TGTTTGTTTCTAGTTGGTTTCAGCTA 59.400 34.615 0.00 0.00 35.96 3.32
2193 2422 6.613755 TTGTTTCTAGTTGGTTTCAGCTAC 57.386 37.500 0.00 0.00 35.96 3.58
2194 2423 5.925509 TGTTTCTAGTTGGTTTCAGCTACT 58.074 37.500 0.00 0.00 35.96 2.57
2195 2424 5.989777 TGTTTCTAGTTGGTTTCAGCTACTC 59.010 40.000 0.00 0.00 35.96 2.59
2196 2425 6.183360 TGTTTCTAGTTGGTTTCAGCTACTCT 60.183 38.462 0.00 0.00 35.96 3.24
2197 2426 5.392767 TCTAGTTGGTTTCAGCTACTCTG 57.607 43.478 0.00 0.00 44.21 3.35
2198 2427 3.409026 AGTTGGTTTCAGCTACTCTGG 57.591 47.619 0.00 0.00 43.06 3.86
2199 2428 2.972713 AGTTGGTTTCAGCTACTCTGGA 59.027 45.455 0.00 0.00 43.06 3.86
2200 2429 3.584848 AGTTGGTTTCAGCTACTCTGGAT 59.415 43.478 0.00 0.00 43.06 3.41
2201 2430 4.042187 AGTTGGTTTCAGCTACTCTGGATT 59.958 41.667 0.00 0.00 43.06 3.01
2202 2431 3.942829 TGGTTTCAGCTACTCTGGATTG 58.057 45.455 0.00 0.00 43.06 2.67
2203 2432 3.327757 TGGTTTCAGCTACTCTGGATTGT 59.672 43.478 0.00 0.00 43.06 2.71
2204 2433 3.935828 GGTTTCAGCTACTCTGGATTGTC 59.064 47.826 0.00 0.00 43.06 3.18
2205 2434 3.895232 TTCAGCTACTCTGGATTGTCC 57.105 47.619 0.00 0.00 43.06 4.02
2206 2435 2.820178 TCAGCTACTCTGGATTGTCCA 58.180 47.619 0.00 0.00 45.98 4.02
2221 2450 7.213678 TGGATTGTCCATAGTTTTTGAAAACC 58.786 34.615 13.98 0.00 44.14 3.27
2222 2451 6.649141 GGATTGTCCATAGTTTTTGAAAACCC 59.351 38.462 13.98 3.06 41.64 4.11
2223 2452 7.472804 GGATTGTCCATAGTTTTTGAAAACCCT 60.473 37.037 13.98 3.36 41.64 4.34
2236 2465 2.787339 AAACCCTAAGTTTTGCCCCT 57.213 45.000 0.00 0.00 46.79 4.79
2237 2466 2.304221 AACCCTAAGTTTTGCCCCTC 57.696 50.000 0.00 0.00 33.89 4.30
2238 2467 1.456919 ACCCTAAGTTTTGCCCCTCT 58.543 50.000 0.00 0.00 0.00 3.69
2239 2468 1.787058 ACCCTAAGTTTTGCCCCTCTT 59.213 47.619 0.00 0.00 0.00 2.85
2240 2469 2.179204 ACCCTAAGTTTTGCCCCTCTTT 59.821 45.455 0.00 0.00 0.00 2.52
2241 2470 2.826128 CCCTAAGTTTTGCCCCTCTTTC 59.174 50.000 0.00 0.00 0.00 2.62
2242 2471 3.496331 CCTAAGTTTTGCCCCTCTTTCA 58.504 45.455 0.00 0.00 0.00 2.69
2243 2472 4.089361 CCTAAGTTTTGCCCCTCTTTCAT 58.911 43.478 0.00 0.00 0.00 2.57
2244 2473 4.528206 CCTAAGTTTTGCCCCTCTTTCATT 59.472 41.667 0.00 0.00 0.00 2.57
2245 2474 5.012046 CCTAAGTTTTGCCCCTCTTTCATTT 59.988 40.000 0.00 0.00 0.00 2.32
2246 2475 4.341366 AGTTTTGCCCCTCTTTCATTTG 57.659 40.909 0.00 0.00 0.00 2.32
2247 2476 3.071457 AGTTTTGCCCCTCTTTCATTTGG 59.929 43.478 0.00 0.00 0.00 3.28
2248 2477 2.397044 TTGCCCCTCTTTCATTTGGT 57.603 45.000 0.00 0.00 0.00 3.67
2249 2478 1.631405 TGCCCCTCTTTCATTTGGTG 58.369 50.000 0.00 0.00 0.00 4.17
2250 2479 0.247460 GCCCCTCTTTCATTTGGTGC 59.753 55.000 0.00 0.00 0.00 5.01
2251 2480 0.897621 CCCCTCTTTCATTTGGTGCC 59.102 55.000 0.00 0.00 0.00 5.01
2252 2481 0.897621 CCCTCTTTCATTTGGTGCCC 59.102 55.000 0.00 0.00 0.00 5.36
2253 2482 1.631405 CCTCTTTCATTTGGTGCCCA 58.369 50.000 0.00 0.00 0.00 5.36
2254 2483 1.969923 CCTCTTTCATTTGGTGCCCAA 59.030 47.619 2.84 2.84 42.29 4.12
2255 2484 2.289010 CCTCTTTCATTTGGTGCCCAAC 60.289 50.000 6.19 0.00 43.82 3.77
2256 2485 1.339610 TCTTTCATTTGGTGCCCAACG 59.660 47.619 6.19 2.24 43.82 4.10
2257 2486 0.390860 TTTCATTTGGTGCCCAACGG 59.609 50.000 6.19 2.89 43.82 4.44
2258 2487 0.468214 TTCATTTGGTGCCCAACGGA 60.468 50.000 6.19 4.88 43.82 4.69
2259 2488 0.468214 TCATTTGGTGCCCAACGGAA 60.468 50.000 6.19 0.00 43.82 4.30
2260 2489 0.390860 CATTTGGTGCCCAACGGAAA 59.609 50.000 6.19 0.00 43.82 3.13
2261 2490 1.001860 CATTTGGTGCCCAACGGAAAT 59.998 47.619 6.19 0.00 43.82 2.17
2262 2491 0.676736 TTTGGTGCCCAACGGAAATC 59.323 50.000 6.19 0.00 43.82 2.17
2263 2492 1.182385 TTGGTGCCCAACGGAAATCC 61.182 55.000 2.84 0.00 38.75 3.01
2264 2493 2.348104 GGTGCCCAACGGAAATCCC 61.348 63.158 0.00 0.00 0.00 3.85
2265 2494 1.605165 GTGCCCAACGGAAATCCCA 60.605 57.895 0.00 0.00 34.14 4.37
2266 2495 0.970427 GTGCCCAACGGAAATCCCAT 60.970 55.000 0.00 0.00 34.14 4.00
2267 2496 0.252012 TGCCCAACGGAAATCCCATT 60.252 50.000 0.00 0.00 34.14 3.16
2268 2497 0.459899 GCCCAACGGAAATCCCATTC 59.540 55.000 0.00 0.00 34.14 2.67
2269 2498 1.959989 GCCCAACGGAAATCCCATTCT 60.960 52.381 0.00 0.00 34.14 2.40
2270 2499 1.750778 CCCAACGGAAATCCCATTCTG 59.249 52.381 0.00 0.00 40.74 3.02
2271 2500 1.134946 CCAACGGAAATCCCATTCTGC 59.865 52.381 0.00 0.00 38.93 4.26
2272 2501 1.134946 CAACGGAAATCCCATTCTGCC 59.865 52.381 0.00 0.00 38.93 4.85
2273 2502 0.331278 ACGGAAATCCCATTCTGCCA 59.669 50.000 0.00 0.00 38.93 4.92
2274 2503 1.272425 ACGGAAATCCCATTCTGCCAA 60.272 47.619 0.00 0.00 38.93 4.52
2275 2504 2.034124 CGGAAATCCCATTCTGCCAAT 58.966 47.619 0.00 0.00 34.14 3.16
2276 2505 2.431782 CGGAAATCCCATTCTGCCAATT 59.568 45.455 0.00 0.00 34.14 2.32
2277 2506 3.118665 CGGAAATCCCATTCTGCCAATTT 60.119 43.478 0.00 0.00 34.14 1.82
2278 2507 4.623647 CGGAAATCCCATTCTGCCAATTTT 60.624 41.667 0.00 0.00 34.14 1.82
2279 2508 5.255687 GGAAATCCCATTCTGCCAATTTTT 58.744 37.500 0.00 0.00 34.14 1.94
2280 2509 5.124297 GGAAATCCCATTCTGCCAATTTTTG 59.876 40.000 0.00 0.00 34.14 2.44
2281 2510 4.914177 ATCCCATTCTGCCAATTTTTGT 57.086 36.364 0.00 0.00 0.00 2.83
2282 2511 4.703379 TCCCATTCTGCCAATTTTTGTT 57.297 36.364 0.00 0.00 0.00 2.83
2283 2512 5.815233 TCCCATTCTGCCAATTTTTGTTA 57.185 34.783 0.00 0.00 0.00 2.41
2284 2513 5.792741 TCCCATTCTGCCAATTTTTGTTAG 58.207 37.500 0.00 0.00 0.00 2.34
2285 2514 4.392754 CCCATTCTGCCAATTTTTGTTAGC 59.607 41.667 0.00 0.00 0.00 3.09
2286 2515 4.091800 CCATTCTGCCAATTTTTGTTAGCG 59.908 41.667 0.00 0.00 0.00 4.26
2287 2516 2.671596 TCTGCCAATTTTTGTTAGCGC 58.328 42.857 0.00 0.00 0.00 5.92
2288 2517 1.726248 CTGCCAATTTTTGTTAGCGCC 59.274 47.619 2.29 0.00 0.00 6.53
2289 2518 1.075542 GCCAATTTTTGTTAGCGCCC 58.924 50.000 2.29 0.00 0.00 6.13
2290 2519 1.606737 GCCAATTTTTGTTAGCGCCCA 60.607 47.619 2.29 0.00 0.00 5.36
2291 2520 2.934801 GCCAATTTTTGTTAGCGCCCAT 60.935 45.455 2.29 0.00 0.00 4.00
2292 2521 2.672381 CCAATTTTTGTTAGCGCCCATG 59.328 45.455 2.29 0.00 0.00 3.66
2293 2522 2.671130 ATTTTTGTTAGCGCCCATGG 57.329 45.000 2.29 4.14 0.00 3.66
2294 2523 1.621992 TTTTTGTTAGCGCCCATGGA 58.378 45.000 15.22 0.00 0.00 3.41
2295 2524 0.885196 TTTTGTTAGCGCCCATGGAC 59.115 50.000 15.22 0.00 0.00 4.02
2296 2525 0.963355 TTTGTTAGCGCCCATGGACC 60.963 55.000 15.22 2.45 0.00 4.46
2297 2526 2.130821 TTGTTAGCGCCCATGGACCA 62.131 55.000 15.22 0.00 0.00 4.02
2298 2527 1.152963 GTTAGCGCCCATGGACCAT 60.153 57.895 15.22 0.00 0.00 3.55
2299 2528 1.148273 TTAGCGCCCATGGACCATC 59.852 57.895 15.22 0.00 0.00 3.51
2300 2529 1.631071 TTAGCGCCCATGGACCATCA 61.631 55.000 15.22 0.00 0.00 3.07
2301 2530 2.324014 TAGCGCCCATGGACCATCAC 62.324 60.000 15.22 0.00 0.00 3.06
2302 2531 2.271821 CGCCCATGGACCATCACA 59.728 61.111 15.22 0.00 0.00 3.58
2303 2532 1.152902 CGCCCATGGACCATCACAT 60.153 57.895 15.22 0.00 0.00 3.21
2304 2533 0.752743 CGCCCATGGACCATCACATT 60.753 55.000 15.22 0.00 0.00 2.71
2305 2534 1.035139 GCCCATGGACCATCACATTC 58.965 55.000 15.22 0.00 0.00 2.67
2306 2535 1.685803 GCCCATGGACCATCACATTCA 60.686 52.381 15.22 0.00 0.00 2.57
2307 2536 2.026641 CCCATGGACCATCACATTCAC 58.973 52.381 15.22 0.00 0.00 3.18
2308 2537 1.672363 CCATGGACCATCACATTCACG 59.328 52.381 5.56 0.00 0.00 4.35
2309 2538 2.358957 CATGGACCATCACATTCACGT 58.641 47.619 3.21 0.00 0.00 4.49
2310 2539 3.530535 CATGGACCATCACATTCACGTA 58.469 45.455 3.21 0.00 0.00 3.57
2311 2540 3.245518 TGGACCATCACATTCACGTAG 57.754 47.619 0.00 0.00 0.00 3.51
2312 2541 2.093711 TGGACCATCACATTCACGTAGG 60.094 50.000 0.00 0.00 0.00 3.18
2313 2542 2.093658 GGACCATCACATTCACGTAGGT 60.094 50.000 0.00 0.00 0.00 3.08
2314 2543 3.596214 GACCATCACATTCACGTAGGTT 58.404 45.455 0.00 0.00 0.00 3.50
2315 2544 4.382254 GGACCATCACATTCACGTAGGTTA 60.382 45.833 0.00 0.00 0.00 2.85
2316 2545 5.353394 ACCATCACATTCACGTAGGTTAT 57.647 39.130 0.00 0.00 0.00 1.89
2317 2546 6.461927 GGACCATCACATTCACGTAGGTTATA 60.462 42.308 0.00 0.00 0.00 0.98
2318 2547 6.513180 ACCATCACATTCACGTAGGTTATAG 58.487 40.000 0.00 0.00 0.00 1.31
2319 2548 5.926542 CCATCACATTCACGTAGGTTATAGG 59.073 44.000 0.00 0.00 0.00 2.57
2320 2549 6.462487 CCATCACATTCACGTAGGTTATAGGT 60.462 42.308 0.00 0.00 0.00 3.08
2321 2550 6.534475 TCACATTCACGTAGGTTATAGGTT 57.466 37.500 0.00 0.00 0.00 3.50
2322 2551 6.567050 TCACATTCACGTAGGTTATAGGTTC 58.433 40.000 0.00 0.00 0.00 3.62
2323 2552 5.751990 CACATTCACGTAGGTTATAGGTTCC 59.248 44.000 0.00 0.00 0.00 3.62
2324 2553 5.659971 ACATTCACGTAGGTTATAGGTTCCT 59.340 40.000 0.00 0.00 35.60 3.36
2325 2554 6.155737 ACATTCACGTAGGTTATAGGTTCCTT 59.844 38.462 0.00 0.00 33.34 3.36
2326 2555 6.610075 TTCACGTAGGTTATAGGTTCCTTT 57.390 37.500 0.00 0.00 33.34 3.11
2327 2556 6.610075 TCACGTAGGTTATAGGTTCCTTTT 57.390 37.500 0.00 0.00 33.34 2.27
2328 2557 6.633856 TCACGTAGGTTATAGGTTCCTTTTC 58.366 40.000 0.00 0.00 33.34 2.29
2329 2558 6.438425 TCACGTAGGTTATAGGTTCCTTTTCT 59.562 38.462 0.00 0.00 33.34 2.52
2330 2559 6.534079 CACGTAGGTTATAGGTTCCTTTTCTG 59.466 42.308 0.00 0.00 33.34 3.02
2331 2560 6.212187 ACGTAGGTTATAGGTTCCTTTTCTGT 59.788 38.462 0.00 0.00 33.34 3.41
2332 2561 7.101700 CGTAGGTTATAGGTTCCTTTTCTGTT 58.898 38.462 0.00 0.00 33.34 3.16
2333 2562 7.605309 CGTAGGTTATAGGTTCCTTTTCTGTTT 59.395 37.037 0.00 0.00 33.34 2.83
2334 2563 9.948964 GTAGGTTATAGGTTCCTTTTCTGTTTA 57.051 33.333 0.00 0.00 33.34 2.01
2336 2565 7.610692 AGGTTATAGGTTCCTTTTCTGTTTAGC 59.389 37.037 0.00 0.00 0.00 3.09
2337 2566 7.392393 GGTTATAGGTTCCTTTTCTGTTTAGCA 59.608 37.037 0.00 0.00 0.00 3.49
2338 2567 8.451748 GTTATAGGTTCCTTTTCTGTTTAGCAG 58.548 37.037 0.00 0.00 46.34 4.24
2339 2568 3.570125 AGGTTCCTTTTCTGTTTAGCAGC 59.430 43.478 0.00 0.00 44.66 5.25
2340 2569 3.317993 GGTTCCTTTTCTGTTTAGCAGCA 59.682 43.478 0.00 0.00 44.66 4.41
2341 2570 4.290969 GTTCCTTTTCTGTTTAGCAGCAC 58.709 43.478 0.00 0.00 44.66 4.40
2342 2571 2.884639 TCCTTTTCTGTTTAGCAGCACC 59.115 45.455 0.00 0.00 44.66 5.01
2343 2572 2.887152 CCTTTTCTGTTTAGCAGCACCT 59.113 45.455 0.00 0.00 44.66 4.00
2344 2573 3.057946 CCTTTTCTGTTTAGCAGCACCTC 60.058 47.826 0.00 0.00 44.66 3.85
2345 2574 2.928801 TTCTGTTTAGCAGCACCTCA 57.071 45.000 0.00 0.00 44.66 3.86
2346 2575 2.169832 TCTGTTTAGCAGCACCTCAC 57.830 50.000 0.00 0.00 44.66 3.51
2347 2576 0.792640 CTGTTTAGCAGCACCTCACG 59.207 55.000 0.00 0.00 38.52 4.35
2348 2577 0.391228 TGTTTAGCAGCACCTCACGA 59.609 50.000 0.00 0.00 0.00 4.35
2349 2578 1.071605 GTTTAGCAGCACCTCACGAG 58.928 55.000 0.00 0.00 0.00 4.18
2350 2579 0.679505 TTTAGCAGCACCTCACGAGT 59.320 50.000 0.00 0.00 0.00 4.18
2351 2580 0.038251 TTAGCAGCACCTCACGAGTG 60.038 55.000 0.00 0.00 0.00 3.51
2352 2581 0.893727 TAGCAGCACCTCACGAGTGA 60.894 55.000 5.76 5.76 38.06 3.41
2360 2589 4.923068 TCACGAGTGAGACCCAGT 57.077 55.556 1.24 0.00 34.14 4.00
2361 2590 3.127099 TCACGAGTGAGACCCAGTT 57.873 52.632 1.24 0.00 34.14 3.16
2362 2591 0.673985 TCACGAGTGAGACCCAGTTG 59.326 55.000 1.24 0.00 34.14 3.16
2363 2592 0.319900 CACGAGTGAGACCCAGTTGG 60.320 60.000 0.00 0.00 41.37 3.77
2364 2593 1.374758 CGAGTGAGACCCAGTTGGC 60.375 63.158 0.00 0.00 37.83 4.52
2365 2594 1.754745 GAGTGAGACCCAGTTGGCA 59.245 57.895 0.00 0.00 37.83 4.92
2366 2595 0.603975 GAGTGAGACCCAGTTGGCAC 60.604 60.000 0.00 0.00 37.83 5.01
2367 2596 1.056700 AGTGAGACCCAGTTGGCACT 61.057 55.000 4.06 4.06 37.83 4.40
2374 2603 2.111043 CAGTTGGCACTGTCCCGT 59.889 61.111 8.37 0.00 44.96 5.28
2375 2604 1.369692 CAGTTGGCACTGTCCCGTA 59.630 57.895 8.37 0.00 44.96 4.02
2376 2605 0.670546 CAGTTGGCACTGTCCCGTAG 60.671 60.000 8.37 0.00 44.96 3.51
2377 2606 2.033194 GTTGGCACTGTCCCGTAGC 61.033 63.158 0.00 0.00 0.00 3.58
2378 2607 3.248446 TTGGCACTGTCCCGTAGCC 62.248 63.158 0.00 0.00 45.41 3.93
2379 2608 4.814294 GGCACTGTCCCGTAGCCG 62.814 72.222 0.00 0.00 35.42 5.52
2380 2609 3.755628 GCACTGTCCCGTAGCCGA 61.756 66.667 0.00 0.00 35.63 5.54
2381 2610 2.490217 CACTGTCCCGTAGCCGAG 59.510 66.667 0.00 0.00 35.63 4.63
2382 2611 2.754658 ACTGTCCCGTAGCCGAGG 60.755 66.667 0.00 0.00 35.63 4.63
2388 2617 2.514592 CCGTAGCCGAGGGACGTA 60.515 66.667 0.00 0.00 40.78 3.57
2389 2618 2.541120 CCGTAGCCGAGGGACGTAG 61.541 68.421 0.00 0.00 40.78 3.51
2390 2619 2.541120 CGTAGCCGAGGGACGTAGG 61.541 68.421 0.00 0.00 40.78 3.18
2391 2620 1.452833 GTAGCCGAGGGACGTAGGT 60.453 63.158 0.00 0.00 40.78 3.08
2392 2621 1.452651 TAGCCGAGGGACGTAGGTG 60.453 63.158 0.00 0.00 40.78 4.00
2393 2622 2.202236 TAGCCGAGGGACGTAGGTGT 62.202 60.000 0.00 0.00 40.78 4.16
2394 2623 3.061260 GCCGAGGGACGTAGGTGTC 62.061 68.421 0.00 0.00 40.78 3.67
2400 2629 4.565531 GACGTAGGTGTCCAACGG 57.434 61.111 0.00 0.00 40.81 4.44
2401 2630 1.662044 GACGTAGGTGTCCAACGGT 59.338 57.895 0.00 0.00 40.81 4.83
2402 2631 0.387750 GACGTAGGTGTCCAACGGTC 60.388 60.000 0.00 0.00 40.81 4.79
2403 2632 1.108727 ACGTAGGTGTCCAACGGTCA 61.109 55.000 0.00 0.00 40.81 4.02
2404 2633 0.032403 CGTAGGTGTCCAACGGTCAA 59.968 55.000 0.00 0.00 33.13 3.18
2405 2634 1.505425 GTAGGTGTCCAACGGTCAAC 58.495 55.000 0.00 0.00 0.00 3.18
2417 2646 2.908817 GGTCAACGGACATGAACGT 58.091 52.632 12.32 12.32 46.17 3.99
2418 2647 0.511221 GGTCAACGGACATGAACGTG 59.489 55.000 17.25 12.35 46.17 4.49
2419 2648 1.493772 GTCAACGGACATGAACGTGA 58.506 50.000 17.25 13.91 43.31 4.35
2420 2649 1.191647 GTCAACGGACATGAACGTGAC 59.808 52.381 17.25 19.10 43.31 3.67
2421 2650 1.202428 TCAACGGACATGAACGTGACA 60.202 47.619 17.25 0.00 43.31 3.58
2422 2651 1.192312 CAACGGACATGAACGTGACAG 59.808 52.381 17.25 7.15 43.31 3.51
2423 2652 0.387929 ACGGACATGAACGTGACAGT 59.612 50.000 16.17 0.00 42.39 3.55
2424 2653 0.784178 CGGACATGAACGTGACAGTG 59.216 55.000 0.00 0.00 0.00 3.66
2425 2654 1.148310 GGACATGAACGTGACAGTGG 58.852 55.000 0.00 0.00 0.00 4.00
2426 2655 1.148310 GACATGAACGTGACAGTGGG 58.852 55.000 0.00 0.00 0.00 4.61
2427 2656 0.468226 ACATGAACGTGACAGTGGGT 59.532 50.000 0.00 0.00 0.00 4.51
2428 2657 0.867746 CATGAACGTGACAGTGGGTG 59.132 55.000 0.00 0.00 0.00 4.61
2429 2658 0.884704 ATGAACGTGACAGTGGGTGC 60.885 55.000 0.00 0.00 0.00 5.01
2430 2659 1.227556 GAACGTGACAGTGGGTGCT 60.228 57.895 0.00 0.00 0.00 4.40
2431 2660 1.498865 GAACGTGACAGTGGGTGCTG 61.499 60.000 0.00 0.00 41.92 4.41
2432 2661 1.966901 AACGTGACAGTGGGTGCTGA 61.967 55.000 0.00 0.00 39.62 4.26
2433 2662 1.956170 CGTGACAGTGGGTGCTGAC 60.956 63.158 0.00 0.00 39.62 3.51
2434 2663 1.598130 GTGACAGTGGGTGCTGACC 60.598 63.158 0.00 0.00 42.27 4.02
2435 2664 2.357517 GACAGTGGGTGCTGACCG 60.358 66.667 0.00 0.00 44.23 4.79
2436 2665 3.883744 GACAGTGGGTGCTGACCGG 62.884 68.421 0.00 0.00 44.23 5.28
2437 2666 3.625897 CAGTGGGTGCTGACCGGA 61.626 66.667 9.46 0.00 44.23 5.14
2438 2667 2.847234 AGTGGGTGCTGACCGGAA 60.847 61.111 9.46 0.00 44.23 4.30
2439 2668 2.112297 GTGGGTGCTGACCGGAAA 59.888 61.111 9.46 0.00 44.23 3.13
2440 2669 1.527380 GTGGGTGCTGACCGGAAAA 60.527 57.895 9.46 0.00 44.23 2.29
2441 2670 1.104577 GTGGGTGCTGACCGGAAAAA 61.105 55.000 9.46 0.00 44.23 1.94
2464 2693 5.772825 AACATGTCAAATGGGGATATTCG 57.227 39.130 0.00 0.00 0.00 3.34
2465 2694 4.792068 ACATGTCAAATGGGGATATTCGT 58.208 39.130 0.00 0.00 0.00 3.85
2466 2695 5.935945 ACATGTCAAATGGGGATATTCGTA 58.064 37.500 0.00 0.00 0.00 3.43
2467 2696 5.997746 ACATGTCAAATGGGGATATTCGTAG 59.002 40.000 0.00 0.00 0.00 3.51
2468 2697 4.968259 TGTCAAATGGGGATATTCGTAGG 58.032 43.478 0.00 0.00 0.00 3.18
2469 2698 4.202419 TGTCAAATGGGGATATTCGTAGGG 60.202 45.833 0.00 0.00 0.00 3.53
2470 2699 4.041198 GTCAAATGGGGATATTCGTAGGGA 59.959 45.833 0.00 0.00 0.00 4.20
2471 2700 4.041198 TCAAATGGGGATATTCGTAGGGAC 59.959 45.833 0.00 0.00 0.00 4.46
2472 2701 2.779429 TGGGGATATTCGTAGGGACA 57.221 50.000 0.00 0.00 0.00 4.02
2473 2702 2.322658 TGGGGATATTCGTAGGGACAC 58.677 52.381 0.00 0.00 0.00 3.67
2474 2703 1.622312 GGGGATATTCGTAGGGACACC 59.378 57.143 0.00 0.00 0.00 4.16
2475 2704 1.271656 GGGATATTCGTAGGGACACCG 59.728 57.143 0.00 0.00 43.47 4.94
2476 2705 2.233271 GGATATTCGTAGGGACACCGA 58.767 52.381 0.00 0.00 43.47 4.69
2477 2706 2.624838 GGATATTCGTAGGGACACCGAA 59.375 50.000 0.00 0.00 44.11 4.30
2478 2707 3.305199 GGATATTCGTAGGGACACCGAAG 60.305 52.174 0.00 0.00 43.49 3.79
2492 2721 2.556286 CGAAGGAAGAGGGGCAAAC 58.444 57.895 0.00 0.00 0.00 2.93
2493 2722 0.036875 CGAAGGAAGAGGGGCAAACT 59.963 55.000 0.00 0.00 0.00 2.66
2494 2723 1.278127 CGAAGGAAGAGGGGCAAACTA 59.722 52.381 0.00 0.00 0.00 2.24
2495 2724 2.290071 CGAAGGAAGAGGGGCAAACTAA 60.290 50.000 0.00 0.00 0.00 2.24
2496 2725 3.348119 GAAGGAAGAGGGGCAAACTAAG 58.652 50.000 0.00 0.00 0.00 2.18
2497 2726 2.632537 AGGAAGAGGGGCAAACTAAGA 58.367 47.619 0.00 0.00 0.00 2.10
2498 2727 2.573915 AGGAAGAGGGGCAAACTAAGAG 59.426 50.000 0.00 0.00 0.00 2.85
2499 2728 2.306219 GGAAGAGGGGCAAACTAAGAGT 59.694 50.000 0.00 0.00 0.00 3.24
2500 2729 3.244946 GGAAGAGGGGCAAACTAAGAGTT 60.245 47.826 0.00 0.00 40.80 3.01
2502 2731 4.022413 AGAGGGGCAAACTAAGAGTTTC 57.978 45.455 1.62 0.00 44.47 2.78
2503 2732 3.082548 GAGGGGCAAACTAAGAGTTTCC 58.917 50.000 1.62 6.77 44.47 3.13
2504 2733 2.445525 AGGGGCAAACTAAGAGTTTCCA 59.554 45.455 15.89 0.00 44.47 3.53
2505 2734 3.117284 AGGGGCAAACTAAGAGTTTCCAA 60.117 43.478 15.89 0.00 44.47 3.53
2506 2735 3.639561 GGGGCAAACTAAGAGTTTCCAAA 59.360 43.478 15.89 0.00 44.47 3.28
2507 2736 4.100344 GGGGCAAACTAAGAGTTTCCAAAA 59.900 41.667 15.89 0.00 44.47 2.44
2508 2737 5.395879 GGGGCAAACTAAGAGTTTCCAAAAA 60.396 40.000 15.89 0.00 44.47 1.94
2509 2738 5.522460 GGGCAAACTAAGAGTTTCCAAAAAC 59.478 40.000 15.89 0.00 44.47 2.43
2522 2751 7.170393 GTTTCCAAAAACTAGGCATAATCCT 57.830 36.000 0.00 0.00 41.32 3.24
2523 2752 6.773976 TTCCAAAAACTAGGCATAATCCTG 57.226 37.500 0.00 0.00 37.01 3.86
2524 2753 6.073447 TCCAAAAACTAGGCATAATCCTGA 57.927 37.500 0.00 0.00 37.01 3.86
2525 2754 6.122277 TCCAAAAACTAGGCATAATCCTGAG 58.878 40.000 0.00 0.00 37.01 3.35
2526 2755 5.888161 CCAAAAACTAGGCATAATCCTGAGT 59.112 40.000 0.00 0.00 37.01 3.41
2527 2756 7.054124 CCAAAAACTAGGCATAATCCTGAGTA 58.946 38.462 0.00 0.00 37.01 2.59
2528 2757 7.227512 CCAAAAACTAGGCATAATCCTGAGTAG 59.772 40.741 0.00 0.00 37.01 2.57
2529 2758 5.476091 AACTAGGCATAATCCTGAGTAGC 57.524 43.478 0.00 0.00 37.01 3.58
2530 2759 4.746466 ACTAGGCATAATCCTGAGTAGCT 58.254 43.478 0.00 0.00 37.01 3.32
2531 2760 4.526262 ACTAGGCATAATCCTGAGTAGCTG 59.474 45.833 0.00 0.00 37.01 4.24
2532 2761 2.636893 AGGCATAATCCTGAGTAGCTGG 59.363 50.000 0.00 0.00 34.56 4.85
2533 2762 2.634940 GGCATAATCCTGAGTAGCTGGA 59.365 50.000 0.00 0.00 46.94 3.86
2534 2763 3.071602 GGCATAATCCTGAGTAGCTGGAA 59.928 47.826 0.00 0.00 46.16 3.53
2535 2764 4.314121 GCATAATCCTGAGTAGCTGGAAG 58.686 47.826 0.00 0.00 46.16 3.46
2548 2777 2.859165 CTGGAAGCAACTAGGGACAA 57.141 50.000 0.00 0.00 0.00 3.18
2549 2778 3.140325 CTGGAAGCAACTAGGGACAAA 57.860 47.619 0.00 0.00 0.00 2.83
2550 2779 3.486383 CTGGAAGCAACTAGGGACAAAA 58.514 45.455 0.00 0.00 0.00 2.44
2551 2780 3.486383 TGGAAGCAACTAGGGACAAAAG 58.514 45.455 0.00 0.00 0.00 2.27
2552 2781 2.229062 GGAAGCAACTAGGGACAAAAGC 59.771 50.000 0.00 0.00 0.00 3.51
2553 2782 2.656947 AGCAACTAGGGACAAAAGCA 57.343 45.000 0.00 0.00 0.00 3.91
2554 2783 2.230660 AGCAACTAGGGACAAAAGCAC 58.769 47.619 0.00 0.00 0.00 4.40
2555 2784 1.953686 GCAACTAGGGACAAAAGCACA 59.046 47.619 0.00 0.00 0.00 4.57
2556 2785 2.287608 GCAACTAGGGACAAAAGCACAC 60.288 50.000 0.00 0.00 0.00 3.82
2557 2786 2.948979 CAACTAGGGACAAAAGCACACA 59.051 45.455 0.00 0.00 0.00 3.72
2558 2787 2.572290 ACTAGGGACAAAAGCACACAC 58.428 47.619 0.00 0.00 0.00 3.82
2559 2788 2.092646 ACTAGGGACAAAAGCACACACA 60.093 45.455 0.00 0.00 0.00 3.72
2560 2789 1.392589 AGGGACAAAAGCACACACAG 58.607 50.000 0.00 0.00 0.00 3.66
2561 2790 1.064758 AGGGACAAAAGCACACACAGA 60.065 47.619 0.00 0.00 0.00 3.41
2562 2791 1.065551 GGGACAAAAGCACACACAGAC 59.934 52.381 0.00 0.00 0.00 3.51
2563 2792 1.742831 GGACAAAAGCACACACAGACA 59.257 47.619 0.00 0.00 0.00 3.41
2564 2793 2.477863 GGACAAAAGCACACACAGACAC 60.478 50.000 0.00 0.00 0.00 3.67
2565 2794 2.158559 ACAAAAGCACACACAGACACA 58.841 42.857 0.00 0.00 0.00 3.72
2566 2795 2.754552 ACAAAAGCACACACAGACACAT 59.245 40.909 0.00 0.00 0.00 3.21
2567 2796 3.193267 ACAAAAGCACACACAGACACATT 59.807 39.130 0.00 0.00 0.00 2.71
2568 2797 3.425577 AAAGCACACACAGACACATTG 57.574 42.857 0.00 0.00 0.00 2.82
2597 2827 1.750778 CATGTATGAACAAGGTGGGGC 59.249 52.381 0.00 0.00 39.58 5.80
2614 2844 4.079253 TGGGGCTAAAAGAAGTGATGAAC 58.921 43.478 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 1.302832 CCCACAGGCCACAGACTTC 60.303 63.158 5.01 0.00 0.00 3.01
58 59 0.038166 ACAATACCCACAGGCCACAG 59.962 55.000 5.01 0.00 36.11 3.66
59 60 1.363246 TACAATACCCACAGGCCACA 58.637 50.000 5.01 0.00 36.11 4.17
60 61 2.729028 ATACAATACCCACAGGCCAC 57.271 50.000 5.01 0.00 36.11 5.01
61 62 5.103898 TCAATTATACAATACCCACAGGCCA 60.104 40.000 5.01 0.00 36.11 5.36
62 63 5.381757 TCAATTATACAATACCCACAGGCC 58.618 41.667 0.00 0.00 36.11 5.19
63 64 6.490040 ACATCAATTATACAATACCCACAGGC 59.510 38.462 0.00 0.00 36.11 4.85
64 65 7.502226 ACACATCAATTATACAATACCCACAGG 59.498 37.037 0.00 0.00 40.04 4.00
207 210 1.811266 CATCGACGTTGGCAGAGGG 60.811 63.158 2.20 0.00 0.00 4.30
219 222 2.909244 CTGTCGTAGTGTGTTCATCGAC 59.091 50.000 8.26 8.26 40.85 4.20
271 274 2.624868 TACCGTGTACGCAGCCGAA 61.625 57.895 7.29 0.00 38.18 4.30
278 281 2.877582 CCGCTGTACCGTGTACGC 60.878 66.667 0.00 14.52 38.18 4.42
292 295 1.439679 CTCAAGTTTCCTGTACCCGC 58.560 55.000 0.00 0.00 0.00 6.13
293 296 1.944430 GCCTCAAGTTTCCTGTACCCG 60.944 57.143 0.00 0.00 0.00 5.28
294 297 1.351350 AGCCTCAAGTTTCCTGTACCC 59.649 52.381 0.00 0.00 0.00 3.69
295 298 2.427506 CAGCCTCAAGTTTCCTGTACC 58.572 52.381 0.00 0.00 0.00 3.34
333 336 4.137543 CCAGAGCACCAAGTAAACTCTTT 58.862 43.478 0.00 0.00 35.57 2.52
501 504 3.032265 AGACCAAAAGGCTGGAAAGTT 57.968 42.857 0.00 0.00 38.96 2.66
502 505 2.755952 AGACCAAAAGGCTGGAAAGT 57.244 45.000 0.00 0.00 38.96 2.66
569 572 5.811796 TTACTACTCAACTGGCCTTAACA 57.188 39.130 3.32 0.00 0.00 2.41
609 616 8.314143 TGGTTCTCGTCTCGTAAAATTATTTT 57.686 30.769 8.07 8.07 36.67 1.82
610 617 7.816031 TCTGGTTCTCGTCTCGTAAAATTATTT 59.184 33.333 0.00 0.00 0.00 1.40
627 636 7.921214 TCTGAAATTATCGTACATCTGGTTCTC 59.079 37.037 0.00 0.00 0.00 2.87
628 637 7.707035 GTCTGAAATTATCGTACATCTGGTTCT 59.293 37.037 0.00 0.00 0.00 3.01
629 638 7.491372 TGTCTGAAATTATCGTACATCTGGTTC 59.509 37.037 0.00 0.00 0.00 3.62
630 639 7.327975 TGTCTGAAATTATCGTACATCTGGTT 58.672 34.615 0.00 0.00 0.00 3.67
631 640 6.873997 TGTCTGAAATTATCGTACATCTGGT 58.126 36.000 0.00 0.00 0.00 4.00
632 641 6.074088 GCTGTCTGAAATTATCGTACATCTGG 60.074 42.308 0.00 0.00 0.00 3.86
693 704 5.636543 GGTGGTGTGTAACTGTATACAAGAC 59.363 44.000 7.06 5.87 37.52 3.01
695 722 5.790593 AGGTGGTGTGTAACTGTATACAAG 58.209 41.667 7.06 4.14 37.52 3.16
702 729 3.926058 AGAAAGGTGGTGTGTAACTGT 57.074 42.857 0.00 0.00 38.04 3.55
703 730 4.733523 GCAAAGAAAGGTGGTGTGTAACTG 60.734 45.833 0.00 0.00 38.04 3.16
704 731 3.380320 GCAAAGAAAGGTGGTGTGTAACT 59.620 43.478 0.00 0.00 38.04 2.24
705 732 3.380320 AGCAAAGAAAGGTGGTGTGTAAC 59.620 43.478 0.00 0.00 37.35 2.50
706 733 3.626930 AGCAAAGAAAGGTGGTGTGTAA 58.373 40.909 0.00 0.00 0.00 2.41
707 734 3.211045 GAGCAAAGAAAGGTGGTGTGTA 58.789 45.455 0.00 0.00 0.00 2.90
708 735 2.024414 GAGCAAAGAAAGGTGGTGTGT 58.976 47.619 0.00 0.00 0.00 3.72
709 736 1.002468 CGAGCAAAGAAAGGTGGTGTG 60.002 52.381 0.00 0.00 0.00 3.82
770 827 0.319211 TCGAGCTTTGGTGTACGGTG 60.319 55.000 0.00 0.00 0.00 4.94
1090 1159 2.202676 GAGGAACGCCGAGCAGAG 60.203 66.667 0.00 0.00 39.96 3.35
1230 1299 4.779733 TGCCCGGAGAGGAGGACC 62.780 72.222 0.73 0.00 45.00 4.46
1234 1303 3.535962 GAGCTGCCCGGAGAGGAG 61.536 72.222 0.73 0.00 45.00 3.69
1235 1304 4.067512 AGAGCTGCCCGGAGAGGA 62.068 66.667 0.73 0.00 45.00 3.71
1237 1306 3.535962 GGAGAGCTGCCCGGAGAG 61.536 72.222 0.73 0.00 0.00 3.20
1239 1308 3.160047 ATGGAGAGCTGCCCGGAG 61.160 66.667 0.73 0.00 0.00 4.63
1662 1737 9.126151 TGTACTCATTTGGTCTTTTTATGTGAA 57.874 29.630 0.00 0.00 0.00 3.18
1663 1738 8.684386 TGTACTCATTTGGTCTTTTTATGTGA 57.316 30.769 0.00 0.00 0.00 3.58
1667 1742 9.747898 TGGTATGTACTCATTTGGTCTTTTTAT 57.252 29.630 0.00 0.00 35.70 1.40
1668 1743 9.226606 CTGGTATGTACTCATTTGGTCTTTTTA 57.773 33.333 0.00 0.00 35.70 1.52
1669 1744 7.309194 GCTGGTATGTACTCATTTGGTCTTTTT 60.309 37.037 0.00 0.00 35.70 1.94
1671 1746 5.648092 GCTGGTATGTACTCATTTGGTCTTT 59.352 40.000 0.00 0.00 35.70 2.52
1673 1748 4.225042 TGCTGGTATGTACTCATTTGGTCT 59.775 41.667 0.00 0.00 35.70 3.85
1674 1749 4.513442 TGCTGGTATGTACTCATTTGGTC 58.487 43.478 0.00 0.00 35.70 4.02
1677 1752 5.878332 TGTTGCTGGTATGTACTCATTTG 57.122 39.130 0.00 0.00 35.70 2.32
1679 1754 5.560724 AGTTGTTGCTGGTATGTACTCATT 58.439 37.500 0.00 0.00 35.70 2.57
1680 1755 5.165961 AGTTGTTGCTGGTATGTACTCAT 57.834 39.130 0.00 0.00 38.00 2.90
1681 1756 4.617253 AGTTGTTGCTGGTATGTACTCA 57.383 40.909 0.00 0.00 0.00 3.41
1682 1757 4.567159 GCTAGTTGTTGCTGGTATGTACTC 59.433 45.833 0.00 0.00 0.00 2.59
1683 1758 4.504858 GCTAGTTGTTGCTGGTATGTACT 58.495 43.478 0.00 0.00 0.00 2.73
1684 1759 3.306166 CGCTAGTTGTTGCTGGTATGTAC 59.694 47.826 0.00 0.00 0.00 2.90
1685 1760 3.517602 CGCTAGTTGTTGCTGGTATGTA 58.482 45.455 0.00 0.00 0.00 2.29
1686 1761 2.346803 CGCTAGTTGTTGCTGGTATGT 58.653 47.619 0.00 0.00 0.00 2.29
1687 1762 1.665679 CCGCTAGTTGTTGCTGGTATG 59.334 52.381 0.00 0.00 0.00 2.39
1688 1763 2.012051 GCCGCTAGTTGTTGCTGGTAT 61.012 52.381 0.00 0.00 0.00 2.73
1689 1764 0.672401 GCCGCTAGTTGTTGCTGGTA 60.672 55.000 0.00 0.00 0.00 3.25
1690 1765 1.966451 GCCGCTAGTTGTTGCTGGT 60.966 57.895 0.00 0.00 0.00 4.00
1691 1766 1.514678 TTGCCGCTAGTTGTTGCTGG 61.515 55.000 0.00 0.00 0.00 4.85
1692 1767 0.385974 GTTGCCGCTAGTTGTTGCTG 60.386 55.000 0.00 0.00 0.00 4.41
1693 1768 0.817634 TGTTGCCGCTAGTTGTTGCT 60.818 50.000 0.00 0.00 0.00 3.91
1694 1769 0.240945 ATGTTGCCGCTAGTTGTTGC 59.759 50.000 0.00 0.00 0.00 4.17
1695 1770 2.584791 GAATGTTGCCGCTAGTTGTTG 58.415 47.619 0.00 0.00 0.00 3.33
1696 1771 1.539827 GGAATGTTGCCGCTAGTTGTT 59.460 47.619 0.00 0.00 0.00 2.83
1697 1772 1.165270 GGAATGTTGCCGCTAGTTGT 58.835 50.000 0.00 0.00 0.00 3.32
1698 1773 1.164411 TGGAATGTTGCCGCTAGTTG 58.836 50.000 0.00 0.00 0.00 3.16
1699 1774 1.904287 TTGGAATGTTGCCGCTAGTT 58.096 45.000 0.00 0.00 0.00 2.24
1700 1775 1.745087 CATTGGAATGTTGCCGCTAGT 59.255 47.619 0.00 0.00 0.00 2.57
1701 1776 1.745087 ACATTGGAATGTTGCCGCTAG 59.255 47.619 0.00 0.00 46.95 3.42
1702 1777 1.832883 ACATTGGAATGTTGCCGCTA 58.167 45.000 0.00 0.00 46.95 4.26
1703 1778 1.832883 TACATTGGAATGTTGCCGCT 58.167 45.000 10.18 0.00 46.95 5.52
1704 1779 2.645730 TTACATTGGAATGTTGCCGC 57.354 45.000 10.18 0.00 46.95 6.53
1705 1780 3.381272 AGGATTACATTGGAATGTTGCCG 59.619 43.478 10.18 0.00 46.95 5.69
1706 1781 5.359576 TGTAGGATTACATTGGAATGTTGCC 59.640 40.000 10.18 9.28 46.95 4.52
1707 1782 6.449635 TGTAGGATTACATTGGAATGTTGC 57.550 37.500 10.18 0.00 46.95 4.17
1708 1783 9.950680 GTATTGTAGGATTACATTGGAATGTTG 57.049 33.333 10.18 0.00 46.95 3.33
1728 1806 9.448438 TGATGTTAATTACTTGCTCTGTATTGT 57.552 29.630 0.00 0.00 0.00 2.71
1785 1889 0.756815 GGGCCCCACAATCAAGGATC 60.757 60.000 12.23 0.00 0.00 3.36
1830 1934 0.549950 AGTCATGGAGGAGCAATGGG 59.450 55.000 0.00 0.00 0.00 4.00
1944 2049 1.361204 TGACAAGGCAGGAAGGATGA 58.639 50.000 0.00 0.00 0.00 2.92
1961 2066 0.251341 GCTGCCCCTTCCTTCTTTGA 60.251 55.000 0.00 0.00 0.00 2.69
1987 2092 2.042831 GGCTGCTGCTGGTTTCGAT 61.043 57.895 15.64 0.00 39.59 3.59
2029 2154 8.074370 TGATGTTAACTACGTATACTCTGCATC 58.926 37.037 7.22 5.88 0.00 3.91
2117 2346 4.881850 AGCTAACCCAGTATTTGTATGCAC 59.118 41.667 0.00 0.00 0.00 4.57
2119 2348 7.562454 TTAAGCTAACCCAGTATTTGTATGC 57.438 36.000 0.00 0.00 0.00 3.14
2122 2351 9.523168 AAACATTAAGCTAACCCAGTATTTGTA 57.477 29.630 0.00 0.00 0.00 2.41
2126 2355 8.866093 ACAAAAACATTAAGCTAACCCAGTATT 58.134 29.630 0.00 0.00 0.00 1.89
2128 2357 7.826918 ACAAAAACATTAAGCTAACCCAGTA 57.173 32.000 0.00 0.00 0.00 2.74
2129 2358 6.724893 ACAAAAACATTAAGCTAACCCAGT 57.275 33.333 0.00 0.00 0.00 4.00
2130 2359 8.357402 ACTTACAAAAACATTAAGCTAACCCAG 58.643 33.333 0.00 0.00 0.00 4.45
2131 2360 8.240267 ACTTACAAAAACATTAAGCTAACCCA 57.760 30.769 0.00 0.00 0.00 4.51
2132 2361 9.537192 AAACTTACAAAAACATTAAGCTAACCC 57.463 29.630 0.00 0.00 0.00 4.11
2164 2393 8.082242 GCTGAAACCAACTAGAAACAAACATAT 58.918 33.333 0.00 0.00 0.00 1.78
2165 2394 7.284489 AGCTGAAACCAACTAGAAACAAACATA 59.716 33.333 0.00 0.00 0.00 2.29
2166 2395 6.096846 AGCTGAAACCAACTAGAAACAAACAT 59.903 34.615 0.00 0.00 0.00 2.71
2167 2396 5.417580 AGCTGAAACCAACTAGAAACAAACA 59.582 36.000 0.00 0.00 0.00 2.83
2168 2397 5.891451 AGCTGAAACCAACTAGAAACAAAC 58.109 37.500 0.00 0.00 0.00 2.93
2169 2398 6.826741 AGTAGCTGAAACCAACTAGAAACAAA 59.173 34.615 0.00 0.00 0.00 2.83
2170 2399 6.354130 AGTAGCTGAAACCAACTAGAAACAA 58.646 36.000 0.00 0.00 0.00 2.83
2171 2400 5.925509 AGTAGCTGAAACCAACTAGAAACA 58.074 37.500 0.00 0.00 0.00 2.83
2172 2401 6.224584 AGAGTAGCTGAAACCAACTAGAAAC 58.775 40.000 0.00 0.00 0.00 2.78
2173 2402 6.420913 AGAGTAGCTGAAACCAACTAGAAA 57.579 37.500 0.00 0.00 0.00 2.52
2194 2423 8.141268 GTTTTCAAAAACTATGGACAATCCAGA 58.859 33.333 10.38 0.00 45.66 3.86
2195 2424 7.384932 GGTTTTCAAAAACTATGGACAATCCAG 59.615 37.037 15.72 0.00 46.86 3.86
2197 2426 6.649141 GGGTTTTCAAAAACTATGGACAATCC 59.351 38.462 15.72 3.70 45.70 3.01
2198 2427 7.441836 AGGGTTTTCAAAAACTATGGACAATC 58.558 34.615 15.72 0.00 45.70 2.67
2199 2428 7.373617 AGGGTTTTCAAAAACTATGGACAAT 57.626 32.000 15.72 0.00 45.70 2.71
2200 2429 6.800072 AGGGTTTTCAAAAACTATGGACAA 57.200 33.333 15.72 0.00 45.70 3.18
2201 2430 7.562088 ACTTAGGGTTTTCAAAAACTATGGACA 59.438 33.333 15.72 0.00 45.70 4.02
2202 2431 7.948357 ACTTAGGGTTTTCAAAAACTATGGAC 58.052 34.615 15.72 1.33 45.70 4.02
2203 2432 8.541899 AACTTAGGGTTTTCAAAAACTATGGA 57.458 30.769 15.72 1.92 45.70 3.41
2218 2447 1.787058 AGAGGGGCAAAACTTAGGGTT 59.213 47.619 0.00 0.00 40.28 4.11
2219 2448 1.456919 AGAGGGGCAAAACTTAGGGT 58.543 50.000 0.00 0.00 0.00 4.34
2220 2449 2.604912 AAGAGGGGCAAAACTTAGGG 57.395 50.000 0.00 0.00 0.00 3.53
2221 2450 3.496331 TGAAAGAGGGGCAAAACTTAGG 58.504 45.455 0.00 0.00 0.00 2.69
2222 2451 5.728637 AATGAAAGAGGGGCAAAACTTAG 57.271 39.130 0.00 0.00 0.00 2.18
2223 2452 5.221621 CCAAATGAAAGAGGGGCAAAACTTA 60.222 40.000 0.00 0.00 0.00 2.24
2224 2453 4.444733 CCAAATGAAAGAGGGGCAAAACTT 60.445 41.667 0.00 0.00 0.00 2.66
2225 2454 3.071457 CCAAATGAAAGAGGGGCAAAACT 59.929 43.478 0.00 0.00 0.00 2.66
2226 2455 3.181455 ACCAAATGAAAGAGGGGCAAAAC 60.181 43.478 0.00 0.00 0.00 2.43
2227 2456 3.044894 ACCAAATGAAAGAGGGGCAAAA 58.955 40.909 0.00 0.00 0.00 2.44
2228 2457 2.368221 CACCAAATGAAAGAGGGGCAAA 59.632 45.455 0.00 0.00 0.00 3.68
2229 2458 1.969923 CACCAAATGAAAGAGGGGCAA 59.030 47.619 0.00 0.00 0.00 4.52
2230 2459 1.631405 CACCAAATGAAAGAGGGGCA 58.369 50.000 0.00 0.00 0.00 5.36
2231 2460 0.247460 GCACCAAATGAAAGAGGGGC 59.753 55.000 0.00 0.00 44.24 5.80
2232 2461 0.897621 GGCACCAAATGAAAGAGGGG 59.102 55.000 0.00 0.00 0.00 4.79
2246 2475 2.348104 GGGATTTCCGTTGGGCACC 61.348 63.158 0.00 0.00 44.04 5.01
2247 2476 0.970427 ATGGGATTTCCGTTGGGCAC 60.970 55.000 0.00 0.00 38.76 5.01
2248 2477 0.252012 AATGGGATTTCCGTTGGGCA 60.252 50.000 0.00 0.00 42.87 5.36
2249 2478 0.459899 GAATGGGATTTCCGTTGGGC 59.540 55.000 0.00 0.00 44.41 5.36
2250 2479 1.750778 CAGAATGGGATTTCCGTTGGG 59.249 52.381 0.00 0.00 44.41 4.12
2251 2480 1.134946 GCAGAATGGGATTTCCGTTGG 59.865 52.381 0.00 0.00 44.41 3.77
2252 2481 1.134946 GGCAGAATGGGATTTCCGTTG 59.865 52.381 0.00 0.00 44.41 4.10
2253 2482 1.272425 TGGCAGAATGGGATTTCCGTT 60.272 47.619 0.00 0.00 46.91 4.44
2254 2483 0.331278 TGGCAGAATGGGATTTCCGT 59.669 50.000 0.00 0.00 38.76 4.69
2255 2484 1.473258 TTGGCAGAATGGGATTTCCG 58.527 50.000 0.00 0.00 38.76 4.30
2256 2485 4.492494 AAATTGGCAGAATGGGATTTCC 57.508 40.909 0.00 0.00 35.86 3.13
2257 2486 5.706833 ACAAAAATTGGCAGAATGGGATTTC 59.293 36.000 0.00 0.00 35.86 2.17
2258 2487 5.633117 ACAAAAATTGGCAGAATGGGATTT 58.367 33.333 0.00 0.00 35.86 2.17
2259 2488 5.245584 ACAAAAATTGGCAGAATGGGATT 57.754 34.783 0.00 0.00 35.86 3.01
2260 2489 4.914177 ACAAAAATTGGCAGAATGGGAT 57.086 36.364 0.00 0.00 35.86 3.85
2261 2490 4.703379 AACAAAAATTGGCAGAATGGGA 57.297 36.364 0.00 0.00 35.86 4.37
2262 2491 4.392754 GCTAACAAAAATTGGCAGAATGGG 59.607 41.667 0.00 0.00 36.18 4.00
2263 2492 4.091800 CGCTAACAAAAATTGGCAGAATGG 59.908 41.667 0.00 0.00 35.92 3.16
2264 2493 4.434593 GCGCTAACAAAAATTGGCAGAATG 60.435 41.667 0.00 0.00 35.92 2.67
2265 2494 3.679502 GCGCTAACAAAAATTGGCAGAAT 59.320 39.130 0.00 0.00 35.92 2.40
2266 2495 3.056304 GCGCTAACAAAAATTGGCAGAA 58.944 40.909 0.00 0.00 35.92 3.02
2267 2496 2.609244 GGCGCTAACAAAAATTGGCAGA 60.609 45.455 7.64 0.00 35.92 4.26
2268 2497 1.726248 GGCGCTAACAAAAATTGGCAG 59.274 47.619 7.64 0.00 35.92 4.85
2269 2498 1.606737 GGGCGCTAACAAAAATTGGCA 60.607 47.619 7.64 0.00 35.92 4.92
2270 2499 1.075542 GGGCGCTAACAAAAATTGGC 58.924 50.000 7.64 0.00 33.04 4.52
2271 2500 2.447244 TGGGCGCTAACAAAAATTGG 57.553 45.000 7.64 0.00 34.12 3.16
2272 2501 2.672381 CCATGGGCGCTAACAAAAATTG 59.328 45.455 7.64 0.00 0.00 2.32
2273 2502 2.564947 TCCATGGGCGCTAACAAAAATT 59.435 40.909 13.02 0.00 0.00 1.82
2274 2503 2.094234 GTCCATGGGCGCTAACAAAAAT 60.094 45.455 13.02 0.00 0.00 1.82
2275 2504 1.271102 GTCCATGGGCGCTAACAAAAA 59.729 47.619 13.02 0.00 0.00 1.94
2276 2505 0.885196 GTCCATGGGCGCTAACAAAA 59.115 50.000 13.02 0.00 0.00 2.44
2277 2506 0.963355 GGTCCATGGGCGCTAACAAA 60.963 55.000 13.02 0.00 0.00 2.83
2278 2507 1.377987 GGTCCATGGGCGCTAACAA 60.378 57.895 13.02 0.00 0.00 2.83
2279 2508 1.920734 ATGGTCCATGGGCGCTAACA 61.921 55.000 13.02 2.91 0.00 2.41
2280 2509 1.152963 ATGGTCCATGGGCGCTAAC 60.153 57.895 13.02 0.56 0.00 2.34
2281 2510 1.148273 GATGGTCCATGGGCGCTAA 59.852 57.895 9.76 0.00 0.00 3.09
2282 2511 2.069430 TGATGGTCCATGGGCGCTA 61.069 57.895 9.76 0.00 0.00 4.26
2283 2512 3.410628 TGATGGTCCATGGGCGCT 61.411 61.111 9.76 0.00 0.00 5.92
2284 2513 3.211963 GTGATGGTCCATGGGCGC 61.212 66.667 9.76 0.00 0.00 6.53
2285 2514 0.752743 AATGTGATGGTCCATGGGCG 60.753 55.000 9.76 0.00 0.00 6.13
2286 2515 1.035139 GAATGTGATGGTCCATGGGC 58.965 55.000 9.76 10.72 0.00 5.36
2287 2516 2.026641 GTGAATGTGATGGTCCATGGG 58.973 52.381 9.76 0.00 0.00 4.00
2288 2517 1.672363 CGTGAATGTGATGGTCCATGG 59.328 52.381 9.76 4.97 0.00 3.66
2289 2518 2.358957 ACGTGAATGTGATGGTCCATG 58.641 47.619 9.76 0.00 0.00 3.66
2290 2519 2.787473 ACGTGAATGTGATGGTCCAT 57.213 45.000 3.26 3.26 0.00 3.41
2291 2520 2.093711 CCTACGTGAATGTGATGGTCCA 60.094 50.000 0.00 0.00 0.00 4.02
2292 2521 2.093658 ACCTACGTGAATGTGATGGTCC 60.094 50.000 0.00 0.00 0.00 4.46
2293 2522 3.247006 ACCTACGTGAATGTGATGGTC 57.753 47.619 0.00 0.00 0.00 4.02
2294 2523 3.695830 AACCTACGTGAATGTGATGGT 57.304 42.857 0.00 0.00 0.00 3.55
2295 2524 5.926542 CCTATAACCTACGTGAATGTGATGG 59.073 44.000 0.00 0.00 0.00 3.51
2296 2525 6.513180 ACCTATAACCTACGTGAATGTGATG 58.487 40.000 0.00 0.00 0.00 3.07
2297 2526 6.726490 ACCTATAACCTACGTGAATGTGAT 57.274 37.500 0.00 0.00 0.00 3.06
2298 2527 6.406177 GGAACCTATAACCTACGTGAATGTGA 60.406 42.308 0.00 0.00 0.00 3.58
2299 2528 5.751990 GGAACCTATAACCTACGTGAATGTG 59.248 44.000 0.00 0.00 0.00 3.21
2300 2529 5.659971 AGGAACCTATAACCTACGTGAATGT 59.340 40.000 0.00 0.00 31.78 2.71
2301 2530 6.158023 AGGAACCTATAACCTACGTGAATG 57.842 41.667 0.00 0.00 31.78 2.67
2302 2531 6.803366 AAGGAACCTATAACCTACGTGAAT 57.197 37.500 0.00 0.00 33.34 2.57
2303 2532 6.610075 AAAGGAACCTATAACCTACGTGAA 57.390 37.500 0.00 0.00 33.34 3.18
2304 2533 6.438425 AGAAAAGGAACCTATAACCTACGTGA 59.562 38.462 0.00 0.00 33.34 4.35
2305 2534 6.534079 CAGAAAAGGAACCTATAACCTACGTG 59.466 42.308 0.00 0.00 33.34 4.49
2306 2535 6.212187 ACAGAAAAGGAACCTATAACCTACGT 59.788 38.462 0.00 0.00 33.34 3.57
2307 2536 6.637657 ACAGAAAAGGAACCTATAACCTACG 58.362 40.000 0.00 0.00 33.34 3.51
2308 2537 8.859236 AAACAGAAAAGGAACCTATAACCTAC 57.141 34.615 0.00 0.00 33.34 3.18
2310 2539 7.610692 GCTAAACAGAAAAGGAACCTATAACCT 59.389 37.037 0.00 0.00 35.36 3.50
2311 2540 7.392393 TGCTAAACAGAAAAGGAACCTATAACC 59.608 37.037 0.00 0.00 0.00 2.85
2312 2541 8.331730 TGCTAAACAGAAAAGGAACCTATAAC 57.668 34.615 0.00 0.00 0.00 1.89
2329 2558 0.391228 TCGTGAGGTGCTGCTAAACA 59.609 50.000 0.00 0.00 0.00 2.83
2330 2559 1.071605 CTCGTGAGGTGCTGCTAAAC 58.928 55.000 0.00 0.00 0.00 2.01
2331 2560 0.679505 ACTCGTGAGGTGCTGCTAAA 59.320 50.000 0.00 0.00 0.00 1.85
2332 2561 0.038251 CACTCGTGAGGTGCTGCTAA 60.038 55.000 0.00 0.00 0.00 3.09
2333 2562 0.893727 TCACTCGTGAGGTGCTGCTA 60.894 55.000 0.00 0.00 34.14 3.49
2334 2563 2.203082 TCACTCGTGAGGTGCTGCT 61.203 57.895 0.00 0.00 34.14 4.24
2335 2564 2.340078 TCACTCGTGAGGTGCTGC 59.660 61.111 1.43 0.00 34.14 5.25
2343 2572 0.673985 CAACTGGGTCTCACTCGTGA 59.326 55.000 0.00 0.00 38.06 4.35
2344 2573 0.319900 CCAACTGGGTCTCACTCGTG 60.320 60.000 0.00 0.00 0.00 4.35
2345 2574 2.050269 CCAACTGGGTCTCACTCGT 58.950 57.895 0.00 0.00 0.00 4.18
2346 2575 1.374758 GCCAACTGGGTCTCACTCG 60.375 63.158 0.00 0.00 39.65 4.18
2347 2576 0.603975 GTGCCAACTGGGTCTCACTC 60.604 60.000 0.00 0.00 39.65 3.51
2348 2577 1.056700 AGTGCCAACTGGGTCTCACT 61.057 55.000 0.00 0.00 39.65 3.41
2349 2578 1.451936 AGTGCCAACTGGGTCTCAC 59.548 57.895 0.00 0.00 39.65 3.51
2350 2579 3.986054 AGTGCCAACTGGGTCTCA 58.014 55.556 0.00 0.00 39.65 3.27
2358 2587 1.671742 CTACGGGACAGTGCCAACT 59.328 57.895 12.28 0.00 36.98 3.16
2359 2588 2.033194 GCTACGGGACAGTGCCAAC 61.033 63.158 12.28 0.00 0.00 3.77
2360 2589 2.345991 GCTACGGGACAGTGCCAA 59.654 61.111 12.28 0.00 0.00 4.52
2361 2590 3.702048 GGCTACGGGACAGTGCCA 61.702 66.667 12.28 0.00 42.79 4.92
2362 2591 4.814294 CGGCTACGGGACAGTGCC 62.814 72.222 0.00 0.00 40.14 5.01
2363 2592 3.701604 CTCGGCTACGGGACAGTGC 62.702 68.421 0.00 0.00 45.57 4.40
2364 2593 2.490217 CTCGGCTACGGGACAGTG 59.510 66.667 0.00 0.00 45.57 3.66
2365 2594 2.754658 CCTCGGCTACGGGACAGT 60.755 66.667 0.00 0.00 45.57 3.55
2366 2595 3.528370 CCCTCGGCTACGGGACAG 61.528 72.222 0.00 0.00 45.57 3.51
2367 2596 4.051167 TCCCTCGGCTACGGGACA 62.051 66.667 3.75 0.00 45.57 4.02
2371 2600 2.514592 TACGTCCCTCGGCTACGG 60.515 66.667 0.00 0.00 44.69 4.02
2372 2601 2.541120 CCTACGTCCCTCGGCTACG 61.541 68.421 0.00 7.31 44.69 3.51
2373 2602 1.452833 ACCTACGTCCCTCGGCTAC 60.453 63.158 0.00 0.00 44.69 3.58
2374 2603 1.452651 CACCTACGTCCCTCGGCTA 60.453 63.158 0.00 0.00 44.69 3.93
2375 2604 2.754658 CACCTACGTCCCTCGGCT 60.755 66.667 0.00 0.00 44.69 5.52
2376 2605 3.061260 GACACCTACGTCCCTCGGC 62.061 68.421 0.00 0.00 44.69 5.54
2377 2606 3.194719 GACACCTACGTCCCTCGG 58.805 66.667 0.00 0.00 44.69 4.63
2386 2615 1.505425 GTTGACCGTTGGACACCTAC 58.495 55.000 0.00 0.00 0.00 3.18
2387 2616 0.032403 CGTTGACCGTTGGACACCTA 59.968 55.000 0.00 0.00 0.00 3.08
2388 2617 1.227438 CGTTGACCGTTGGACACCT 60.227 57.895 0.00 0.00 0.00 4.00
2389 2618 2.248835 CCGTTGACCGTTGGACACC 61.249 63.158 0.00 0.00 33.66 4.16
2390 2619 1.227321 TCCGTTGACCGTTGGACAC 60.227 57.895 0.00 0.00 33.66 3.67
2391 2620 3.218227 TCCGTTGACCGTTGGACA 58.782 55.556 0.00 0.00 33.66 4.02
2392 2621 3.633951 GTCCGTTGACCGTTGGAC 58.366 61.111 0.00 0.00 43.60 4.02
2393 2622 0.601576 CATGTCCGTTGACCGTTGGA 60.602 55.000 0.00 0.00 41.01 3.53
2394 2623 0.601576 TCATGTCCGTTGACCGTTGG 60.602 55.000 0.00 0.00 41.01 3.77
2395 2624 1.070175 GTTCATGTCCGTTGACCGTTG 60.070 52.381 0.00 0.00 41.01 4.10
2396 2625 1.223187 GTTCATGTCCGTTGACCGTT 58.777 50.000 0.00 0.00 41.01 4.44
2397 2626 0.942410 CGTTCATGTCCGTTGACCGT 60.942 55.000 0.00 0.00 41.01 4.83
2398 2627 0.942410 ACGTTCATGTCCGTTGACCG 60.942 55.000 6.60 0.00 41.01 4.79
2399 2628 0.511221 CACGTTCATGTCCGTTGACC 59.489 55.000 9.17 0.00 41.01 4.02
2400 2629 1.191647 GTCACGTTCATGTCCGTTGAC 59.808 52.381 9.17 14.00 42.12 3.18
2401 2630 1.202428 TGTCACGTTCATGTCCGTTGA 60.202 47.619 9.17 8.14 34.59 3.18
2402 2631 1.192312 CTGTCACGTTCATGTCCGTTG 59.808 52.381 9.17 6.43 34.59 4.10
2403 2632 1.202486 ACTGTCACGTTCATGTCCGTT 60.202 47.619 9.17 0.00 34.59 4.44
2404 2633 0.387929 ACTGTCACGTTCATGTCCGT 59.612 50.000 6.60 6.60 37.90 4.69
2405 2634 0.784178 CACTGTCACGTTCATGTCCG 59.216 55.000 5.45 5.45 0.00 4.79
2406 2635 1.148310 CCACTGTCACGTTCATGTCC 58.852 55.000 0.00 0.00 0.00 4.02
2407 2636 1.148310 CCCACTGTCACGTTCATGTC 58.852 55.000 0.00 0.00 0.00 3.06
2408 2637 0.468226 ACCCACTGTCACGTTCATGT 59.532 50.000 0.00 0.00 0.00 3.21
2409 2638 0.867746 CACCCACTGTCACGTTCATG 59.132 55.000 0.00 0.00 0.00 3.07
2410 2639 0.884704 GCACCCACTGTCACGTTCAT 60.885 55.000 0.00 0.00 0.00 2.57
2411 2640 1.522806 GCACCCACTGTCACGTTCA 60.523 57.895 0.00 0.00 0.00 3.18
2412 2641 1.227556 AGCACCCACTGTCACGTTC 60.228 57.895 0.00 0.00 0.00 3.95
2413 2642 1.523711 CAGCACCCACTGTCACGTT 60.524 57.895 0.00 0.00 32.78 3.99
2414 2643 2.108976 CAGCACCCACTGTCACGT 59.891 61.111 0.00 0.00 32.78 4.49
2415 2644 1.956170 GTCAGCACCCACTGTCACG 60.956 63.158 0.00 0.00 38.84 4.35
2416 2645 1.598130 GGTCAGCACCCACTGTCAC 60.598 63.158 0.00 0.00 38.84 3.67
2417 2646 2.828868 GGTCAGCACCCACTGTCA 59.171 61.111 0.00 0.00 38.84 3.58
2418 2647 2.357517 CGGTCAGCACCCACTGTC 60.358 66.667 0.00 0.00 40.01 3.51
2419 2648 3.941188 CCGGTCAGCACCCACTGT 61.941 66.667 0.00 0.00 40.01 3.55
2420 2649 2.674563 TTTCCGGTCAGCACCCACTG 62.675 60.000 0.00 0.00 40.01 3.66
2421 2650 1.990160 TTTTCCGGTCAGCACCCACT 61.990 55.000 0.00 0.00 40.01 4.00
2422 2651 1.104577 TTTTTCCGGTCAGCACCCAC 61.105 55.000 0.00 0.00 40.01 4.61
2423 2652 1.227664 TTTTTCCGGTCAGCACCCA 59.772 52.632 0.00 0.00 40.01 4.51
2424 2653 4.167597 TTTTTCCGGTCAGCACCC 57.832 55.556 0.00 0.00 40.01 4.61
2439 2668 7.041107 CGAATATCCCCATTTGACATGTTTTT 58.959 34.615 0.00 0.00 0.00 1.94
2440 2669 6.154363 ACGAATATCCCCATTTGACATGTTTT 59.846 34.615 0.00 0.00 0.00 2.43
2441 2670 5.656416 ACGAATATCCCCATTTGACATGTTT 59.344 36.000 0.00 0.00 0.00 2.83
2442 2671 5.200483 ACGAATATCCCCATTTGACATGTT 58.800 37.500 0.00 0.00 0.00 2.71
2443 2672 4.792068 ACGAATATCCCCATTTGACATGT 58.208 39.130 0.00 0.00 0.00 3.21
2444 2673 5.412594 CCTACGAATATCCCCATTTGACATG 59.587 44.000 0.00 0.00 0.00 3.21
2445 2674 5.514834 CCCTACGAATATCCCCATTTGACAT 60.515 44.000 0.00 0.00 0.00 3.06
2446 2675 4.202419 CCCTACGAATATCCCCATTTGACA 60.202 45.833 0.00 0.00 0.00 3.58
2447 2676 4.041198 TCCCTACGAATATCCCCATTTGAC 59.959 45.833 0.00 0.00 0.00 3.18
2448 2677 4.041198 GTCCCTACGAATATCCCCATTTGA 59.959 45.833 0.00 0.00 0.00 2.69
2449 2678 4.202419 TGTCCCTACGAATATCCCCATTTG 60.202 45.833 0.00 0.00 0.00 2.32
2450 2679 3.977999 TGTCCCTACGAATATCCCCATTT 59.022 43.478 0.00 0.00 0.00 2.32
2451 2680 3.326880 GTGTCCCTACGAATATCCCCATT 59.673 47.826 0.00 0.00 0.00 3.16
2452 2681 2.904434 GTGTCCCTACGAATATCCCCAT 59.096 50.000 0.00 0.00 0.00 4.00
2453 2682 2.322658 GTGTCCCTACGAATATCCCCA 58.677 52.381 0.00 0.00 0.00 4.96
2454 2683 1.622312 GGTGTCCCTACGAATATCCCC 59.378 57.143 0.00 0.00 0.00 4.81
2455 2684 1.271656 CGGTGTCCCTACGAATATCCC 59.728 57.143 0.00 0.00 0.00 3.85
2456 2685 2.233271 TCGGTGTCCCTACGAATATCC 58.767 52.381 0.00 0.00 33.21 2.59
2457 2686 3.305199 CCTTCGGTGTCCCTACGAATATC 60.305 52.174 0.00 0.00 44.35 1.63
2458 2687 2.626743 CCTTCGGTGTCCCTACGAATAT 59.373 50.000 0.00 0.00 44.35 1.28
2459 2688 2.026641 CCTTCGGTGTCCCTACGAATA 58.973 52.381 0.00 0.00 44.35 1.75
2460 2689 0.822164 CCTTCGGTGTCCCTACGAAT 59.178 55.000 0.00 0.00 44.35 3.34
2461 2690 0.251297 TCCTTCGGTGTCCCTACGAA 60.251 55.000 0.00 0.00 43.39 3.85
2462 2691 0.251297 TTCCTTCGGTGTCCCTACGA 60.251 55.000 0.00 0.00 34.47 3.43
2463 2692 0.172803 CTTCCTTCGGTGTCCCTACG 59.827 60.000 0.00 0.00 0.00 3.51
2464 2693 1.477295 CTCTTCCTTCGGTGTCCCTAC 59.523 57.143 0.00 0.00 0.00 3.18
2465 2694 1.618888 CCTCTTCCTTCGGTGTCCCTA 60.619 57.143 0.00 0.00 0.00 3.53
2466 2695 0.905337 CCTCTTCCTTCGGTGTCCCT 60.905 60.000 0.00 0.00 0.00 4.20
2467 2696 1.597461 CCTCTTCCTTCGGTGTCCC 59.403 63.158 0.00 0.00 0.00 4.46
2468 2697 1.597461 CCCTCTTCCTTCGGTGTCC 59.403 63.158 0.00 0.00 0.00 4.02
2469 2698 1.597461 CCCCTCTTCCTTCGGTGTC 59.403 63.158 0.00 0.00 0.00 3.67
2470 2699 2.593956 GCCCCTCTTCCTTCGGTGT 61.594 63.158 0.00 0.00 0.00 4.16
2471 2700 2.124507 TTGCCCCTCTTCCTTCGGTG 62.125 60.000 0.00 0.00 0.00 4.94
2472 2701 1.423794 TTTGCCCCTCTTCCTTCGGT 61.424 55.000 0.00 0.00 0.00 4.69
2473 2702 0.960861 GTTTGCCCCTCTTCCTTCGG 60.961 60.000 0.00 0.00 0.00 4.30
2474 2703 0.036875 AGTTTGCCCCTCTTCCTTCG 59.963 55.000 0.00 0.00 0.00 3.79
2475 2704 3.009143 TCTTAGTTTGCCCCTCTTCCTTC 59.991 47.826 0.00 0.00 0.00 3.46
2476 2705 2.986728 TCTTAGTTTGCCCCTCTTCCTT 59.013 45.455 0.00 0.00 0.00 3.36
2477 2706 2.573915 CTCTTAGTTTGCCCCTCTTCCT 59.426 50.000 0.00 0.00 0.00 3.36
2478 2707 2.306219 ACTCTTAGTTTGCCCCTCTTCC 59.694 50.000 0.00 0.00 0.00 3.46
2479 2708 3.704800 ACTCTTAGTTTGCCCCTCTTC 57.295 47.619 0.00 0.00 0.00 2.87
2480 2709 4.455070 AAACTCTTAGTTTGCCCCTCTT 57.545 40.909 4.32 0.00 45.83 2.85
2498 2727 7.035612 CAGGATTATGCCTAGTTTTTGGAAAC 58.964 38.462 0.00 0.00 39.87 2.78
2499 2728 6.951198 TCAGGATTATGCCTAGTTTTTGGAAA 59.049 34.615 0.00 0.00 36.22 3.13
2500 2729 6.489603 TCAGGATTATGCCTAGTTTTTGGAA 58.510 36.000 0.00 0.00 36.22 3.53
2501 2730 6.073447 TCAGGATTATGCCTAGTTTTTGGA 57.927 37.500 0.00 0.00 36.22 3.53
2502 2731 5.888161 ACTCAGGATTATGCCTAGTTTTTGG 59.112 40.000 0.00 0.00 36.22 3.28
2503 2732 7.254932 GCTACTCAGGATTATGCCTAGTTTTTG 60.255 40.741 0.00 0.00 36.22 2.44
2504 2733 6.768381 GCTACTCAGGATTATGCCTAGTTTTT 59.232 38.462 0.00 0.00 36.22 1.94
2505 2734 6.100424 AGCTACTCAGGATTATGCCTAGTTTT 59.900 38.462 0.00 0.00 36.22 2.43
2506 2735 5.604650 AGCTACTCAGGATTATGCCTAGTTT 59.395 40.000 0.00 0.00 36.22 2.66
2507 2736 5.011533 CAGCTACTCAGGATTATGCCTAGTT 59.988 44.000 0.00 0.00 36.22 2.24
2508 2737 4.526262 CAGCTACTCAGGATTATGCCTAGT 59.474 45.833 0.00 0.00 36.22 2.57
2509 2738 4.081752 CCAGCTACTCAGGATTATGCCTAG 60.082 50.000 0.00 0.00 36.22 3.02
2510 2739 3.834813 CCAGCTACTCAGGATTATGCCTA 59.165 47.826 0.00 0.00 36.22 3.93
2511 2740 2.636893 CCAGCTACTCAGGATTATGCCT 59.363 50.000 0.00 0.00 39.37 4.75
2512 2741 2.634940 TCCAGCTACTCAGGATTATGCC 59.365 50.000 0.00 0.00 0.00 4.40
2513 2742 4.314121 CTTCCAGCTACTCAGGATTATGC 58.686 47.826 0.00 0.00 29.85 3.14
2514 2743 4.202295 TGCTTCCAGCTACTCAGGATTATG 60.202 45.833 0.00 0.00 42.97 1.90
2515 2744 3.969976 TGCTTCCAGCTACTCAGGATTAT 59.030 43.478 0.00 0.00 42.97 1.28
2516 2745 3.374764 TGCTTCCAGCTACTCAGGATTA 58.625 45.455 0.00 0.00 42.97 1.75
2517 2746 2.191400 TGCTTCCAGCTACTCAGGATT 58.809 47.619 0.00 0.00 42.97 3.01
2518 2747 1.871418 TGCTTCCAGCTACTCAGGAT 58.129 50.000 0.00 0.00 42.97 3.24
2519 2748 1.276421 GTTGCTTCCAGCTACTCAGGA 59.724 52.381 3.46 0.00 42.32 3.86
2520 2749 1.731720 GTTGCTTCCAGCTACTCAGG 58.268 55.000 3.46 0.00 42.32 3.86
2525 2754 1.831736 TCCCTAGTTGCTTCCAGCTAC 59.168 52.381 2.54 2.54 45.15 3.58
2526 2755 1.831736 GTCCCTAGTTGCTTCCAGCTA 59.168 52.381 0.00 0.00 42.97 3.32
2527 2756 0.615850 GTCCCTAGTTGCTTCCAGCT 59.384 55.000 0.00 0.00 42.97 4.24
2528 2757 0.324943 TGTCCCTAGTTGCTTCCAGC 59.675 55.000 0.00 0.00 42.82 4.85
2529 2758 2.859165 TTGTCCCTAGTTGCTTCCAG 57.141 50.000 0.00 0.00 0.00 3.86
2530 2759 3.486383 CTTTTGTCCCTAGTTGCTTCCA 58.514 45.455 0.00 0.00 0.00 3.53
2531 2760 2.229062 GCTTTTGTCCCTAGTTGCTTCC 59.771 50.000 0.00 0.00 0.00 3.46
2532 2761 2.884639 TGCTTTTGTCCCTAGTTGCTTC 59.115 45.455 0.00 0.00 0.00 3.86
2533 2762 2.623416 GTGCTTTTGTCCCTAGTTGCTT 59.377 45.455 0.00 0.00 0.00 3.91
2534 2763 2.230660 GTGCTTTTGTCCCTAGTTGCT 58.769 47.619 0.00 0.00 0.00 3.91
2535 2764 1.953686 TGTGCTTTTGTCCCTAGTTGC 59.046 47.619 0.00 0.00 0.00 4.17
2536 2765 2.948979 TGTGTGCTTTTGTCCCTAGTTG 59.051 45.455 0.00 0.00 0.00 3.16
2537 2766 2.949644 GTGTGTGCTTTTGTCCCTAGTT 59.050 45.455 0.00 0.00 0.00 2.24
2538 2767 2.092646 TGTGTGTGCTTTTGTCCCTAGT 60.093 45.455 0.00 0.00 0.00 2.57
2539 2768 2.549754 CTGTGTGTGCTTTTGTCCCTAG 59.450 50.000 0.00 0.00 0.00 3.02
2540 2769 2.171659 TCTGTGTGTGCTTTTGTCCCTA 59.828 45.455 0.00 0.00 0.00 3.53
2541 2770 1.064758 TCTGTGTGTGCTTTTGTCCCT 60.065 47.619 0.00 0.00 0.00 4.20
2542 2771 1.065551 GTCTGTGTGTGCTTTTGTCCC 59.934 52.381 0.00 0.00 0.00 4.46
2543 2772 1.742831 TGTCTGTGTGTGCTTTTGTCC 59.257 47.619 0.00 0.00 0.00 4.02
2544 2773 2.161410 TGTGTCTGTGTGTGCTTTTGTC 59.839 45.455 0.00 0.00 0.00 3.18
2545 2774 2.158559 TGTGTCTGTGTGTGCTTTTGT 58.841 42.857 0.00 0.00 0.00 2.83
2546 2775 2.917701 TGTGTCTGTGTGTGCTTTTG 57.082 45.000 0.00 0.00 0.00 2.44
2547 2776 3.193267 ACAATGTGTCTGTGTGTGCTTTT 59.807 39.130 0.00 0.00 0.00 2.27
2548 2777 2.754552 ACAATGTGTCTGTGTGTGCTTT 59.245 40.909 0.00 0.00 0.00 3.51
2549 2778 2.368439 ACAATGTGTCTGTGTGTGCTT 58.632 42.857 0.00 0.00 0.00 3.91
2550 2779 2.042686 ACAATGTGTCTGTGTGTGCT 57.957 45.000 0.00 0.00 0.00 4.40
2551 2780 2.849880 AACAATGTGTCTGTGTGTGC 57.150 45.000 0.00 0.00 0.00 4.57
2552 2781 5.733226 TCTTAACAATGTGTCTGTGTGTG 57.267 39.130 0.00 0.00 0.00 3.82
2553 2782 5.277974 GCATCTTAACAATGTGTCTGTGTGT 60.278 40.000 0.00 0.00 0.00 3.72
2554 2783 5.149273 GCATCTTAACAATGTGTCTGTGTG 58.851 41.667 0.00 0.00 0.00 3.82
2555 2784 4.821260 TGCATCTTAACAATGTGTCTGTGT 59.179 37.500 0.00 0.00 0.00 3.72
2556 2785 5.361135 TGCATCTTAACAATGTGTCTGTG 57.639 39.130 0.00 0.00 0.00 3.66
2557 2786 5.474532 ACATGCATCTTAACAATGTGTCTGT 59.525 36.000 0.00 0.00 0.00 3.41
2558 2787 5.946298 ACATGCATCTTAACAATGTGTCTG 58.054 37.500 0.00 0.00 0.00 3.51
2559 2788 7.553760 TCATACATGCATCTTAACAATGTGTCT 59.446 33.333 0.00 0.00 0.00 3.41
2560 2789 7.696755 TCATACATGCATCTTAACAATGTGTC 58.303 34.615 0.00 0.00 0.00 3.67
2561 2790 7.628769 TCATACATGCATCTTAACAATGTGT 57.371 32.000 0.00 0.00 0.00 3.72
2562 2791 7.969508 TGTTCATACATGCATCTTAACAATGTG 59.030 33.333 0.00 0.00 0.00 3.21
2563 2792 8.054152 TGTTCATACATGCATCTTAACAATGT 57.946 30.769 0.00 0.00 0.00 2.71
2564 2793 8.914328 TTGTTCATACATGCATCTTAACAATG 57.086 30.769 13.88 4.95 32.40 2.82
2565 2794 8.192774 CCTTGTTCATACATGCATCTTAACAAT 58.807 33.333 16.40 0.00 35.68 2.71
2566 2795 7.176515 ACCTTGTTCATACATGCATCTTAACAA 59.823 33.333 15.71 15.71 35.15 2.83
2567 2796 6.658816 ACCTTGTTCATACATGCATCTTAACA 59.341 34.615 0.00 0.92 33.44 2.41
2568 2797 6.968904 CACCTTGTTCATACATGCATCTTAAC 59.031 38.462 0.00 0.00 33.44 2.01
2614 2844 6.183360 CGCCATTGCTACGAAGGTATATTAAG 60.183 42.308 0.00 0.00 34.43 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.