Multiple sequence alignment - TraesCS2D01G474500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G474500 chr2D 100.000 4476 0 0 1 4476 577535202 577539677 0.000000e+00 8266.0
1 TraesCS2D01G474500 chr2D 84.703 1582 158 38 2758 4302 577579902 577578368 0.000000e+00 1504.0
2 TraesCS2D01G474500 chr2D 85.960 1339 148 15 1020 2343 577581911 577580598 0.000000e+00 1395.0
3 TraesCS2D01G474500 chr2D 85.577 1352 168 16 1007 2343 577802859 577801520 0.000000e+00 1391.0
4 TraesCS2D01G474500 chr2D 85.497 1186 129 18 1177 2343 577440816 577441977 0.000000e+00 1197.0
5 TraesCS2D01G474500 chr2D 87.790 647 66 10 2766 3404 577442759 577443400 0.000000e+00 745.0
6 TraesCS2D01G474500 chr2D 95.614 456 20 0 1 456 547803221 547803676 0.000000e+00 732.0
7 TraesCS2D01G474500 chr2D 94.433 467 24 2 1 465 165538182 165537716 0.000000e+00 717.0
8 TraesCS2D01G474500 chr2D 85.277 686 82 13 2672 3341 577800842 577800160 0.000000e+00 689.0
9 TraesCS2D01G474500 chr2B 95.710 3636 114 16 696 4316 695172421 695168813 0.000000e+00 5812.0
10 TraesCS2D01G474500 chr2B 84.693 1581 181 31 2751 4303 695108981 695110528 0.000000e+00 1522.0
11 TraesCS2D01G474500 chr2B 85.893 1361 141 17 1002 2343 695380000 695378672 0.000000e+00 1402.0
12 TraesCS2D01G474500 chr2B 85.428 1345 146 21 1020 2340 695106859 695108177 0.000000e+00 1352.0
13 TraesCS2D01G474500 chr2B 82.809 1303 186 19 1016 2292 695508136 695509426 0.000000e+00 1131.0
14 TraesCS2D01G474500 chr2B 80.499 882 142 16 1000 1860 695414347 695413475 0.000000e+00 649.0
15 TraesCS2D01G474500 chr2B 81.496 762 103 18 2616 3357 695437271 695436528 3.860000e-165 592.0
16 TraesCS2D01G474500 chr2B 85.385 390 47 6 2806 3192 695377747 695377365 3.240000e-106 396.0
17 TraesCS2D01G474500 chr2B 96.040 101 2 2 515 613 695361893 695361793 3.580000e-36 163.0
18 TraesCS2D01G474500 chr2A 95.725 1965 60 9 715 2660 715918284 715916325 0.000000e+00 3142.0
19 TraesCS2D01G474500 chr2A 96.797 1717 41 7 2698 4404 715916319 715914607 0.000000e+00 2854.0
20 TraesCS2D01G474500 chr2A 85.477 1384 154 18 984 2343 715951255 715949895 0.000000e+00 1399.0
21 TraesCS2D01G474500 chr2A 86.893 1030 118 11 1020 2042 715880631 715881650 0.000000e+00 1138.0
22 TraesCS2D01G474500 chr2A 86.901 939 93 17 2758 3674 715890501 715891431 0.000000e+00 1026.0
23 TraesCS2D01G474500 chr2A 86.282 554 61 7 3753 4302 715891473 715892015 4.990000e-164 588.0
24 TraesCS2D01G474500 chr2A 90.476 63 4 2 4342 4403 715945593 715945532 1.030000e-11 82.4
25 TraesCS2D01G474500 chr6D 94.635 466 24 1 1 465 426930047 426929582 0.000000e+00 721.0
26 TraesCS2D01G474500 chr6D 94.043 470 26 2 1 469 345765861 345765393 0.000000e+00 712.0
27 TraesCS2D01G474500 chr3A 94.421 466 24 2 1 465 31928340 31928804 0.000000e+00 715.0
28 TraesCS2D01G474500 chr1D 94.967 457 22 1 1 456 467660965 467661421 0.000000e+00 715.0
29 TraesCS2D01G474500 chr1D 94.748 457 23 1 1 456 348728159 348728615 0.000000e+00 710.0
30 TraesCS2D01G474500 chr1D 98.182 55 1 0 4398 4452 56876293 56876347 3.690000e-16 97.1
31 TraesCS2D01G474500 chr4D 94.206 466 25 2 1 465 3384531 3384995 0.000000e+00 710.0
32 TraesCS2D01G474500 chr7D 93.856 472 26 2 1 469 52510711 52510240 0.000000e+00 708.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G474500 chr2D 577535202 577539677 4475 False 8266.0 8266 100.0000 1 4476 1 chr2D.!!$F2 4475
1 TraesCS2D01G474500 chr2D 577578368 577581911 3543 True 1449.5 1504 85.3315 1020 4302 2 chr2D.!!$R2 3282
2 TraesCS2D01G474500 chr2D 577800160 577802859 2699 True 1040.0 1391 85.4270 1007 3341 2 chr2D.!!$R3 2334
3 TraesCS2D01G474500 chr2D 577440816 577443400 2584 False 971.0 1197 86.6435 1177 3404 2 chr2D.!!$F3 2227
4 TraesCS2D01G474500 chr2B 695168813 695172421 3608 True 5812.0 5812 95.7100 696 4316 1 chr2B.!!$R1 3620
5 TraesCS2D01G474500 chr2B 695106859 695110528 3669 False 1437.0 1522 85.0605 1020 4303 2 chr2B.!!$F2 3283
6 TraesCS2D01G474500 chr2B 695508136 695509426 1290 False 1131.0 1131 82.8090 1016 2292 1 chr2B.!!$F1 1276
7 TraesCS2D01G474500 chr2B 695377365 695380000 2635 True 899.0 1402 85.6390 1002 3192 2 chr2B.!!$R5 2190
8 TraesCS2D01G474500 chr2B 695413475 695414347 872 True 649.0 649 80.4990 1000 1860 1 chr2B.!!$R3 860
9 TraesCS2D01G474500 chr2B 695436528 695437271 743 True 592.0 592 81.4960 2616 3357 1 chr2B.!!$R4 741
10 TraesCS2D01G474500 chr2A 715914607 715918284 3677 True 2998.0 3142 96.2610 715 4404 2 chr2A.!!$R3 3689
11 TraesCS2D01G474500 chr2A 715949895 715951255 1360 True 1399.0 1399 85.4770 984 2343 1 chr2A.!!$R2 1359
12 TraesCS2D01G474500 chr2A 715880631 715881650 1019 False 1138.0 1138 86.8930 1020 2042 1 chr2A.!!$F1 1022
13 TraesCS2D01G474500 chr2A 715890501 715892015 1514 False 807.0 1026 86.5915 2758 4302 2 chr2A.!!$F2 1544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.031449 GCCCAGACTATCTGCGTCTC 59.969 60.0 0.02 0.0 42.98 3.36 F
619 620 0.109723 CCCGGACTTCCAAGTTCCAA 59.890 55.0 0.73 0.0 39.88 3.53 F
1412 1475 0.038166 ATCAAACACCGGAGCACCAT 59.962 50.0 9.46 0.0 35.59 3.55 F
2243 2319 0.953727 CTTGTGTGTGACCATGGTGG 59.046 55.0 25.52 0.0 45.02 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1297 1333 1.330655 GGAGTGAATCTGGCGGAGGA 61.331 60.000 1.04 0.0 0.00 3.71 R
1581 1647 1.630244 ATGAGAAGACAGCAACGCGC 61.630 55.000 5.73 0.0 42.91 6.86 R
3093 3869 1.344114 ACATTTGCGTTGCCATCCTTT 59.656 42.857 0.00 0.0 0.00 3.11 R
3754 4553 0.036010 ACCCTGCCGATCTTTGTCAG 60.036 55.000 0.00 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.815211 GCGCAGTGCAGATTCGGA 60.815 61.111 16.83 0.00 45.45 4.55
18 19 2.806856 GCGCAGTGCAGATTCGGAG 61.807 63.158 16.83 0.00 45.45 4.63
19 20 1.446792 CGCAGTGCAGATTCGGAGT 60.447 57.895 16.83 0.00 0.00 3.85
20 21 1.016130 CGCAGTGCAGATTCGGAGTT 61.016 55.000 16.83 0.00 0.00 3.01
21 22 0.723981 GCAGTGCAGATTCGGAGTTC 59.276 55.000 11.09 0.00 0.00 3.01
22 23 0.994995 CAGTGCAGATTCGGAGTTCG 59.005 55.000 0.00 0.00 40.90 3.95
23 24 0.737715 AGTGCAGATTCGGAGTTCGC 60.738 55.000 0.00 0.00 39.05 4.70
24 25 0.737715 GTGCAGATTCGGAGTTCGCT 60.738 55.000 0.00 0.00 39.05 4.93
25 26 0.737367 TGCAGATTCGGAGTTCGCTG 60.737 55.000 0.00 0.00 39.05 5.18
26 27 0.737715 GCAGATTCGGAGTTCGCTGT 60.738 55.000 0.00 0.00 39.05 4.40
27 28 0.994995 CAGATTCGGAGTTCGCTGTG 59.005 55.000 0.00 0.00 39.05 3.66
28 29 0.108615 AGATTCGGAGTTCGCTGTGG 60.109 55.000 0.00 0.00 39.05 4.17
29 30 1.079127 ATTCGGAGTTCGCTGTGGG 60.079 57.895 0.00 0.00 39.05 4.61
30 31 1.541310 ATTCGGAGTTCGCTGTGGGA 61.541 55.000 0.00 0.00 39.05 4.37
31 32 2.125912 CGGAGTTCGCTGTGGGAG 60.126 66.667 0.00 0.00 0.00 4.30
32 33 2.266055 GGAGTTCGCTGTGGGAGG 59.734 66.667 0.00 0.00 0.00 4.30
33 34 2.283529 GGAGTTCGCTGTGGGAGGA 61.284 63.158 0.00 0.00 0.00 3.71
34 35 1.617947 GGAGTTCGCTGTGGGAGGAT 61.618 60.000 0.00 0.00 0.00 3.24
35 36 0.460987 GAGTTCGCTGTGGGAGGATG 60.461 60.000 0.00 0.00 0.00 3.51
36 37 1.450312 GTTCGCTGTGGGAGGATGG 60.450 63.158 0.00 0.00 0.00 3.51
37 38 1.612146 TTCGCTGTGGGAGGATGGA 60.612 57.895 0.00 0.00 0.00 3.41
38 39 1.899437 TTCGCTGTGGGAGGATGGAC 61.899 60.000 0.00 0.00 0.00 4.02
39 40 2.362369 CGCTGTGGGAGGATGGACT 61.362 63.158 0.00 0.00 0.00 3.85
40 41 1.524482 GCTGTGGGAGGATGGACTC 59.476 63.158 0.00 0.00 36.76 3.36
41 42 1.819229 CTGTGGGAGGATGGACTCG 59.181 63.158 0.00 0.00 38.39 4.18
42 43 2.303549 CTGTGGGAGGATGGACTCGC 62.304 65.000 0.00 0.00 46.93 5.03
44 45 4.593864 GGGAGGATGGACTCGCGC 62.594 72.222 0.00 0.00 40.01 6.86
45 46 3.838271 GGAGGATGGACTCGCGCA 61.838 66.667 8.75 0.00 38.39 6.09
46 47 2.279120 GAGGATGGACTCGCGCAG 60.279 66.667 8.75 6.77 0.00 5.18
47 48 3.781770 GAGGATGGACTCGCGCAGG 62.782 68.421 8.75 0.80 0.00 4.85
48 49 3.838271 GGATGGACTCGCGCAGGA 61.838 66.667 8.75 0.00 0.00 3.86
49 50 2.279120 GATGGACTCGCGCAGGAG 60.279 66.667 8.75 9.70 39.97 3.69
50 51 3.781770 GATGGACTCGCGCAGGAGG 62.782 68.421 15.41 0.00 38.39 4.30
52 53 4.500116 GGACTCGCGCAGGAGGAC 62.500 72.222 15.41 9.34 38.39 3.85
53 54 4.838486 GACTCGCGCAGGAGGACG 62.838 72.222 15.41 0.00 38.39 4.79
55 56 4.838486 CTCGCGCAGGAGGACGAC 62.838 72.222 8.75 0.00 0.00 4.34
60 61 4.057428 GCAGGAGGACGACGCTGT 62.057 66.667 0.00 0.00 0.00 4.40
61 62 2.179517 CAGGAGGACGACGCTGTC 59.820 66.667 0.00 0.00 38.17 3.51
82 83 4.771356 CGTCGTGGTGGCGTCGAT 62.771 66.667 0.00 0.00 43.57 3.59
83 84 2.486504 GTCGTGGTGGCGTCGATA 59.513 61.111 0.00 0.00 36.08 2.92
84 85 1.585521 GTCGTGGTGGCGTCGATAG 60.586 63.158 0.00 0.00 36.08 2.08
85 86 2.954868 CGTGGTGGCGTCGATAGC 60.955 66.667 7.23 7.23 0.00 2.97
86 87 2.183300 GTGGTGGCGTCGATAGCA 59.817 61.111 15.89 0.00 36.08 3.49
87 88 1.878522 GTGGTGGCGTCGATAGCAG 60.879 63.158 15.89 0.00 36.08 4.24
88 89 2.049767 TGGTGGCGTCGATAGCAGA 61.050 57.895 15.89 1.48 36.08 4.26
89 90 1.299468 GGTGGCGTCGATAGCAGAG 60.299 63.158 15.89 0.00 36.08 3.35
90 91 1.725557 GGTGGCGTCGATAGCAGAGA 61.726 60.000 15.89 0.00 36.08 3.10
91 92 0.317436 GTGGCGTCGATAGCAGAGAG 60.317 60.000 15.89 0.00 36.08 3.20
92 93 0.463833 TGGCGTCGATAGCAGAGAGA 60.464 55.000 15.89 0.00 36.08 3.10
93 94 0.040781 GGCGTCGATAGCAGAGAGAC 60.041 60.000 15.89 0.00 36.08 3.36
94 95 0.040781 GCGTCGATAGCAGAGAGACC 60.041 60.000 10.39 0.00 34.19 3.85
95 96 1.588674 CGTCGATAGCAGAGAGACCT 58.411 55.000 0.00 0.00 0.00 3.85
96 97 1.262950 CGTCGATAGCAGAGAGACCTG 59.737 57.143 0.00 0.00 37.23 4.00
97 98 1.606668 GTCGATAGCAGAGAGACCTGG 59.393 57.143 0.00 0.00 34.82 4.45
98 99 0.313672 CGATAGCAGAGAGACCTGGC 59.686 60.000 0.00 0.00 34.82 4.85
99 100 1.407936 GATAGCAGAGAGACCTGGCA 58.592 55.000 0.00 0.00 34.82 4.92
100 101 1.068434 GATAGCAGAGAGACCTGGCAC 59.932 57.143 0.00 0.00 34.82 5.01
101 102 1.315981 TAGCAGAGAGACCTGGCACG 61.316 60.000 0.00 0.00 34.82 5.34
102 103 2.575993 CAGAGAGACCTGGCACGG 59.424 66.667 0.00 2.01 0.00 4.94
103 104 2.118513 AGAGAGACCTGGCACGGT 59.881 61.111 8.14 8.14 37.88 4.83
104 105 0.965866 CAGAGAGACCTGGCACGGTA 60.966 60.000 8.34 0.00 35.59 4.02
105 106 0.966370 AGAGAGACCTGGCACGGTAC 60.966 60.000 8.34 6.64 35.59 3.34
106 107 1.228769 AGAGACCTGGCACGGTACA 60.229 57.895 8.34 0.00 35.59 2.90
107 108 0.614979 AGAGACCTGGCACGGTACAT 60.615 55.000 8.34 0.00 35.59 2.29
108 109 0.460284 GAGACCTGGCACGGTACATG 60.460 60.000 8.34 0.00 35.59 3.21
118 119 2.409012 CACGGTACATGCAACAGTACA 58.591 47.619 21.40 0.00 41.74 2.90
119 120 2.411748 CACGGTACATGCAACAGTACAG 59.588 50.000 21.40 20.00 41.74 2.74
120 121 1.393539 CGGTACATGCAACAGTACAGC 59.606 52.381 21.40 9.92 41.74 4.40
121 122 2.699954 GGTACATGCAACAGTACAGCT 58.300 47.619 21.40 0.00 41.74 4.24
122 123 2.673368 GGTACATGCAACAGTACAGCTC 59.327 50.000 21.40 7.37 41.74 4.09
123 124 2.847327 ACATGCAACAGTACAGCTCT 57.153 45.000 0.00 0.00 0.00 4.09
124 125 2.420642 ACATGCAACAGTACAGCTCTG 58.579 47.619 0.00 0.00 38.68 3.35
125 126 2.037641 ACATGCAACAGTACAGCTCTGA 59.962 45.455 7.84 0.00 36.81 3.27
126 127 2.908688 TGCAACAGTACAGCTCTGAA 57.091 45.000 7.84 0.00 36.81 3.02
127 128 2.759191 TGCAACAGTACAGCTCTGAAG 58.241 47.619 7.84 1.57 36.81 3.02
128 129 2.365293 TGCAACAGTACAGCTCTGAAGA 59.635 45.455 7.84 0.00 36.81 2.87
129 130 3.007290 TGCAACAGTACAGCTCTGAAGAT 59.993 43.478 7.84 0.00 36.81 2.40
130 131 3.370366 GCAACAGTACAGCTCTGAAGATG 59.630 47.826 7.84 0.00 44.61 2.90
131 132 3.883830 ACAGTACAGCTCTGAAGATGG 57.116 47.619 7.84 0.00 43.33 3.51
132 133 3.435275 ACAGTACAGCTCTGAAGATGGA 58.565 45.455 7.84 0.00 43.33 3.41
133 134 4.029520 ACAGTACAGCTCTGAAGATGGAT 58.970 43.478 7.84 0.00 43.33 3.41
134 135 4.469227 ACAGTACAGCTCTGAAGATGGATT 59.531 41.667 7.84 0.00 43.33 3.01
135 136 4.809958 CAGTACAGCTCTGAAGATGGATTG 59.190 45.833 3.60 0.00 43.33 2.67
136 137 3.278668 ACAGCTCTGAAGATGGATTGG 57.721 47.619 3.60 0.00 43.33 3.16
137 138 2.575279 ACAGCTCTGAAGATGGATTGGT 59.425 45.455 3.60 0.00 43.33 3.67
138 139 2.943690 CAGCTCTGAAGATGGATTGGTG 59.056 50.000 0.00 0.00 35.22 4.17
139 140 2.092538 AGCTCTGAAGATGGATTGGTGG 60.093 50.000 0.00 0.00 0.00 4.61
140 141 2.295885 CTCTGAAGATGGATTGGTGGC 58.704 52.381 0.00 0.00 0.00 5.01
141 142 1.634973 TCTGAAGATGGATTGGTGGCA 59.365 47.619 0.00 0.00 0.00 4.92
142 143 2.022195 CTGAAGATGGATTGGTGGCAG 58.978 52.381 0.00 0.00 0.00 4.85
143 144 1.341285 TGAAGATGGATTGGTGGCAGG 60.341 52.381 0.00 0.00 0.00 4.85
144 145 0.706433 AAGATGGATTGGTGGCAGGT 59.294 50.000 0.00 0.00 0.00 4.00
145 146 0.033796 AGATGGATTGGTGGCAGGTG 60.034 55.000 0.00 0.00 0.00 4.00
146 147 0.034186 GATGGATTGGTGGCAGGTGA 60.034 55.000 0.00 0.00 0.00 4.02
147 148 0.323725 ATGGATTGGTGGCAGGTGAC 60.324 55.000 0.00 0.00 0.00 3.67
148 149 1.380302 GGATTGGTGGCAGGTGACT 59.620 57.895 0.00 0.00 46.44 3.41
162 163 4.221422 GACTGCGGCGGCCTCATA 62.221 66.667 18.34 0.00 38.85 2.15
163 164 4.530857 ACTGCGGCGGCCTCATAC 62.531 66.667 18.34 1.79 38.85 2.39
172 173 4.937431 GCCTCATACCCGGCAGGC 62.937 72.222 0.00 3.18 45.59 4.85
173 174 4.609018 CCTCATACCCGGCAGGCG 62.609 72.222 9.96 9.96 40.58 5.52
174 175 3.849951 CTCATACCCGGCAGGCGT 61.850 66.667 16.17 0.00 40.58 5.68
175 176 3.792053 CTCATACCCGGCAGGCGTC 62.792 68.421 16.17 0.00 40.58 5.19
176 177 4.910585 CATACCCGGCAGGCGTCC 62.911 72.222 16.17 0.00 40.58 4.79
191 192 3.059982 TCCTGGTTGAGGAGTGCG 58.940 61.111 0.00 0.00 46.96 5.34
192 193 2.743928 CCTGGTTGAGGAGTGCGC 60.744 66.667 0.00 0.00 46.33 6.09
193 194 2.345244 CTGGTTGAGGAGTGCGCT 59.655 61.111 9.73 0.00 0.00 5.92
194 195 2.031012 TGGTTGAGGAGTGCGCTG 59.969 61.111 3.44 0.00 0.00 5.18
195 196 2.743928 GGTTGAGGAGTGCGCTGG 60.744 66.667 3.44 0.00 0.00 4.85
196 197 2.343758 GTTGAGGAGTGCGCTGGA 59.656 61.111 3.44 0.00 0.00 3.86
197 198 2.029844 GTTGAGGAGTGCGCTGGAC 61.030 63.158 3.44 0.00 0.00 4.02
198 199 2.210013 TTGAGGAGTGCGCTGGACT 61.210 57.895 3.44 3.11 0.00 3.85
199 200 2.125753 GAGGAGTGCGCTGGACTG 60.126 66.667 3.44 0.00 0.00 3.51
200 201 3.655810 GAGGAGTGCGCTGGACTGG 62.656 68.421 3.44 0.00 0.00 4.00
201 202 4.008933 GGAGTGCGCTGGACTGGT 62.009 66.667 3.44 0.00 0.00 4.00
202 203 2.646175 GGAGTGCGCTGGACTGGTA 61.646 63.158 3.44 0.00 0.00 3.25
203 204 1.153745 GAGTGCGCTGGACTGGTAG 60.154 63.158 3.44 0.00 0.00 3.18
204 205 2.125512 GTGCGCTGGACTGGTAGG 60.126 66.667 9.73 0.00 0.00 3.18
205 206 2.603473 TGCGCTGGACTGGTAGGT 60.603 61.111 9.73 0.00 0.00 3.08
206 207 2.125512 GCGCTGGACTGGTAGGTG 60.126 66.667 0.00 0.00 0.00 4.00
207 208 2.125512 CGCTGGACTGGTAGGTGC 60.126 66.667 0.00 0.00 0.00 5.01
208 209 2.269241 GCTGGACTGGTAGGTGCC 59.731 66.667 0.00 0.00 0.00 5.01
209 210 2.990479 CTGGACTGGTAGGTGCCC 59.010 66.667 0.00 0.00 0.00 5.36
210 211 2.609610 TGGACTGGTAGGTGCCCC 60.610 66.667 0.00 0.00 0.00 5.80
211 212 2.609610 GGACTGGTAGGTGCCCCA 60.610 66.667 0.00 0.00 0.00 4.96
212 213 2.001269 GGACTGGTAGGTGCCCCAT 61.001 63.158 0.00 0.00 0.00 4.00
213 214 0.693092 GGACTGGTAGGTGCCCCATA 60.693 60.000 0.00 0.00 0.00 2.74
214 215 0.468648 GACTGGTAGGTGCCCCATAC 59.531 60.000 0.00 0.00 0.00 2.39
215 216 0.986550 ACTGGTAGGTGCCCCATACC 60.987 60.000 7.24 7.24 36.14 2.73
216 217 1.694882 TGGTAGGTGCCCCATACCC 60.695 63.158 10.66 0.00 39.05 3.69
217 218 2.814835 GGTAGGTGCCCCATACCCG 61.815 68.421 3.61 0.00 39.05 5.28
218 219 2.446994 TAGGTGCCCCATACCCGG 60.447 66.667 0.00 0.00 39.05 5.73
226 227 4.910585 CCATACCCGGCAGGCGTC 62.911 72.222 16.17 0.00 40.58 5.19
227 228 4.910585 CATACCCGGCAGGCGTCC 62.911 72.222 16.17 0.00 40.58 4.79
229 230 3.744003 ATACCCGGCAGGCGTCCTA 62.744 63.158 16.17 1.63 40.58 2.94
232 233 3.771160 CCGGCAGGCGTCCTAGTT 61.771 66.667 16.17 0.00 29.64 2.24
233 234 2.509336 CGGCAGGCGTCCTAGTTG 60.509 66.667 8.53 0.00 29.64 3.16
234 235 2.125106 GGCAGGCGTCCTAGTTGG 60.125 66.667 0.00 0.00 29.64 3.77
235 236 2.125106 GCAGGCGTCCTAGTTGGG 60.125 66.667 0.00 0.00 36.20 4.12
236 237 2.656069 GCAGGCGTCCTAGTTGGGA 61.656 63.158 0.00 0.00 36.20 4.37
242 243 4.779113 TCCTAGTTGGGACCTCGG 57.221 61.111 0.00 0.00 36.20 4.63
243 244 1.001248 TCCTAGTTGGGACCTCGGG 59.999 63.158 0.00 0.00 36.20 5.14
244 245 1.305887 CCTAGTTGGGACCTCGGGT 60.306 63.158 0.00 0.00 39.44 5.28
258 259 4.840271 ACCTCGGGTCTTAAATGTTTAGG 58.160 43.478 0.00 0.00 0.00 2.69
259 260 4.287845 ACCTCGGGTCTTAAATGTTTAGGT 59.712 41.667 0.00 0.00 0.00 3.08
260 261 5.221986 ACCTCGGGTCTTAAATGTTTAGGTT 60.222 40.000 0.00 0.00 0.00 3.50
261 262 5.708697 CCTCGGGTCTTAAATGTTTAGGTTT 59.291 40.000 0.00 0.00 0.00 3.27
262 263 6.349033 CCTCGGGTCTTAAATGTTTAGGTTTG 60.349 42.308 0.00 0.00 0.00 2.93
263 264 5.474189 TCGGGTCTTAAATGTTTAGGTTTGG 59.526 40.000 0.00 0.00 0.00 3.28
264 265 5.475719 GGGTCTTAAATGTTTAGGTTTGGC 58.524 41.667 0.00 0.00 0.00 4.52
265 266 5.245301 GGGTCTTAAATGTTTAGGTTTGGCT 59.755 40.000 0.00 0.00 0.00 4.75
266 267 6.156519 GGTCTTAAATGTTTAGGTTTGGCTG 58.843 40.000 0.00 0.00 0.00 4.85
267 268 5.633601 GTCTTAAATGTTTAGGTTTGGCTGC 59.366 40.000 0.00 0.00 0.00 5.25
268 269 2.723124 AATGTTTAGGTTTGGCTGCG 57.277 45.000 0.00 0.00 0.00 5.18
269 270 1.904287 ATGTTTAGGTTTGGCTGCGA 58.096 45.000 0.00 0.00 0.00 5.10
270 271 1.904287 TGTTTAGGTTTGGCTGCGAT 58.096 45.000 0.00 0.00 0.00 4.58
271 272 1.539388 TGTTTAGGTTTGGCTGCGATG 59.461 47.619 0.00 0.00 0.00 3.84
272 273 1.539827 GTTTAGGTTTGGCTGCGATGT 59.460 47.619 0.00 0.00 0.00 3.06
273 274 1.448985 TTAGGTTTGGCTGCGATGTC 58.551 50.000 0.00 0.00 0.00 3.06
274 275 0.613260 TAGGTTTGGCTGCGATGTCT 59.387 50.000 0.00 0.00 0.00 3.41
275 276 0.957395 AGGTTTGGCTGCGATGTCTG 60.957 55.000 0.00 0.00 0.00 3.51
276 277 1.237285 GGTTTGGCTGCGATGTCTGT 61.237 55.000 0.00 0.00 0.00 3.41
277 278 0.593128 GTTTGGCTGCGATGTCTGTT 59.407 50.000 0.00 0.00 0.00 3.16
278 279 1.001378 GTTTGGCTGCGATGTCTGTTT 60.001 47.619 0.00 0.00 0.00 2.83
279 280 0.592637 TTGGCTGCGATGTCTGTTTG 59.407 50.000 0.00 0.00 0.00 2.93
280 281 1.236616 TGGCTGCGATGTCTGTTTGG 61.237 55.000 0.00 0.00 0.00 3.28
281 282 1.237285 GGCTGCGATGTCTGTTTGGT 61.237 55.000 0.00 0.00 0.00 3.67
282 283 1.438651 GCTGCGATGTCTGTTTGGTA 58.561 50.000 0.00 0.00 0.00 3.25
283 284 2.009774 GCTGCGATGTCTGTTTGGTAT 58.990 47.619 0.00 0.00 0.00 2.73
284 285 2.420022 GCTGCGATGTCTGTTTGGTATT 59.580 45.455 0.00 0.00 0.00 1.89
285 286 3.621268 GCTGCGATGTCTGTTTGGTATTA 59.379 43.478 0.00 0.00 0.00 0.98
286 287 4.260375 GCTGCGATGTCTGTTTGGTATTAG 60.260 45.833 0.00 0.00 0.00 1.73
287 288 4.188462 TGCGATGTCTGTTTGGTATTAGG 58.812 43.478 0.00 0.00 0.00 2.69
288 289 3.002348 GCGATGTCTGTTTGGTATTAGGC 59.998 47.826 0.00 0.00 0.00 3.93
289 290 3.560068 CGATGTCTGTTTGGTATTAGGCC 59.440 47.826 0.00 0.00 0.00 5.19
290 291 3.359695 TGTCTGTTTGGTATTAGGCCC 57.640 47.619 0.00 0.00 0.00 5.80
291 292 2.645297 TGTCTGTTTGGTATTAGGCCCA 59.355 45.455 0.00 0.00 0.00 5.36
292 293 3.279434 GTCTGTTTGGTATTAGGCCCAG 58.721 50.000 0.00 0.00 31.04 4.45
293 294 3.054655 GTCTGTTTGGTATTAGGCCCAGA 60.055 47.826 0.00 0.00 31.04 3.86
294 295 3.054655 TCTGTTTGGTATTAGGCCCAGAC 60.055 47.826 0.00 0.00 36.61 3.51
295 296 2.916934 TGTTTGGTATTAGGCCCAGACT 59.083 45.455 0.00 0.00 36.91 3.24
296 297 4.105577 TGTTTGGTATTAGGCCCAGACTA 58.894 43.478 0.00 0.00 36.91 2.59
297 298 4.724798 TGTTTGGTATTAGGCCCAGACTAT 59.275 41.667 0.00 0.00 36.91 2.12
298 299 5.163237 TGTTTGGTATTAGGCCCAGACTATC 60.163 44.000 0.00 0.00 36.91 2.08
299 300 4.487282 TGGTATTAGGCCCAGACTATCT 57.513 45.455 0.00 0.00 0.00 1.98
300 301 4.160329 TGGTATTAGGCCCAGACTATCTG 58.840 47.826 0.00 0.00 43.91 2.90
301 302 3.055747 GGTATTAGGCCCAGACTATCTGC 60.056 52.174 0.00 0.00 42.98 4.26
302 303 1.040646 TTAGGCCCAGACTATCTGCG 58.959 55.000 0.00 0.00 42.98 5.18
303 304 0.106167 TAGGCCCAGACTATCTGCGT 60.106 55.000 0.00 0.00 42.98 5.24
304 305 1.068250 GGCCCAGACTATCTGCGTC 59.932 63.158 0.00 0.00 42.98 5.19
305 306 1.395826 GGCCCAGACTATCTGCGTCT 61.396 60.000 0.00 0.00 42.98 4.18
306 307 0.031449 GCCCAGACTATCTGCGTCTC 59.969 60.000 0.02 0.00 42.98 3.36
307 308 1.686355 CCCAGACTATCTGCGTCTCT 58.314 55.000 0.02 0.00 42.98 3.10
308 309 2.028130 CCCAGACTATCTGCGTCTCTT 58.972 52.381 0.02 0.00 42.98 2.85
309 310 2.428890 CCCAGACTATCTGCGTCTCTTT 59.571 50.000 0.02 0.00 42.98 2.52
310 311 3.632604 CCCAGACTATCTGCGTCTCTTTA 59.367 47.826 0.02 0.00 42.98 1.85
311 312 4.279671 CCCAGACTATCTGCGTCTCTTTAT 59.720 45.833 0.02 0.00 42.98 1.40
312 313 5.457140 CCAGACTATCTGCGTCTCTTTATC 58.543 45.833 0.02 0.00 42.98 1.75
313 314 5.009110 CCAGACTATCTGCGTCTCTTTATCA 59.991 44.000 0.02 0.00 42.98 2.15
314 315 6.460261 CCAGACTATCTGCGTCTCTTTATCAA 60.460 42.308 0.02 0.00 42.98 2.57
315 316 7.144661 CAGACTATCTGCGTCTCTTTATCAAT 58.855 38.462 0.00 0.00 39.59 2.57
316 317 7.651304 CAGACTATCTGCGTCTCTTTATCAATT 59.349 37.037 0.00 0.00 39.59 2.32
317 318 7.651304 AGACTATCTGCGTCTCTTTATCAATTG 59.349 37.037 0.00 0.00 37.13 2.32
318 319 5.998454 ATCTGCGTCTCTTTATCAATTGG 57.002 39.130 5.42 0.00 0.00 3.16
319 320 5.084818 TCTGCGTCTCTTTATCAATTGGA 57.915 39.130 5.42 0.00 0.00 3.53
320 321 5.674525 TCTGCGTCTCTTTATCAATTGGAT 58.325 37.500 5.42 0.89 40.14 3.41
321 322 6.816136 TCTGCGTCTCTTTATCAATTGGATA 58.184 36.000 5.42 0.00 37.44 2.59
322 323 6.925718 TCTGCGTCTCTTTATCAATTGGATAG 59.074 38.462 5.42 0.00 39.57 2.08
323 324 5.991606 TGCGTCTCTTTATCAATTGGATAGG 59.008 40.000 5.42 0.00 39.57 2.57
324 325 5.992217 GCGTCTCTTTATCAATTGGATAGGT 59.008 40.000 5.42 0.00 39.57 3.08
325 326 6.073548 GCGTCTCTTTATCAATTGGATAGGTG 60.074 42.308 5.42 0.00 39.57 4.00
326 327 6.986817 CGTCTCTTTATCAATTGGATAGGTGT 59.013 38.462 5.42 0.00 39.57 4.16
327 328 8.141909 CGTCTCTTTATCAATTGGATAGGTGTA 58.858 37.037 5.42 0.00 39.57 2.90
328 329 9.482627 GTCTCTTTATCAATTGGATAGGTGTAG 57.517 37.037 5.42 0.00 39.57 2.74
329 330 8.150945 TCTCTTTATCAATTGGATAGGTGTAGC 58.849 37.037 5.42 0.00 39.57 3.58
330 331 6.929049 TCTTTATCAATTGGATAGGTGTAGCG 59.071 38.462 5.42 0.00 39.57 4.26
331 332 3.469008 TCAATTGGATAGGTGTAGCGG 57.531 47.619 5.42 0.00 0.00 5.52
332 333 1.873591 CAATTGGATAGGTGTAGCGGC 59.126 52.381 0.00 0.00 0.00 6.53
333 334 1.128200 ATTGGATAGGTGTAGCGGCA 58.872 50.000 1.45 0.00 0.00 5.69
334 335 0.464036 TTGGATAGGTGTAGCGGCAG 59.536 55.000 1.45 0.00 0.00 4.85
335 336 0.686441 TGGATAGGTGTAGCGGCAGT 60.686 55.000 1.45 0.00 0.00 4.40
336 337 0.464452 GGATAGGTGTAGCGGCAGTT 59.536 55.000 1.45 0.00 0.00 3.16
337 338 1.571919 GATAGGTGTAGCGGCAGTTG 58.428 55.000 1.45 0.00 0.00 3.16
338 339 0.902531 ATAGGTGTAGCGGCAGTTGT 59.097 50.000 1.45 0.00 0.00 3.32
339 340 0.682852 TAGGTGTAGCGGCAGTTGTT 59.317 50.000 1.45 0.00 0.00 2.83
340 341 0.884704 AGGTGTAGCGGCAGTTGTTG 60.885 55.000 1.45 0.00 0.00 3.33
351 352 2.949714 CAGTTGTTGCTTAGACGGTG 57.050 50.000 0.00 0.00 0.00 4.94
352 353 2.210116 CAGTTGTTGCTTAGACGGTGT 58.790 47.619 0.00 0.00 0.00 4.16
353 354 2.221055 CAGTTGTTGCTTAGACGGTGTC 59.779 50.000 0.00 0.00 0.00 3.67
354 355 2.102588 AGTTGTTGCTTAGACGGTGTCT 59.897 45.455 4.70 4.70 45.54 3.41
355 356 2.870411 GTTGTTGCTTAGACGGTGTCTT 59.130 45.455 4.60 0.00 40.28 3.01
356 357 3.188159 TGTTGCTTAGACGGTGTCTTT 57.812 42.857 4.60 0.00 40.28 2.52
357 358 4.325028 TGTTGCTTAGACGGTGTCTTTA 57.675 40.909 4.60 0.00 40.28 1.85
358 359 4.304110 TGTTGCTTAGACGGTGTCTTTAG 58.696 43.478 4.60 4.90 40.28 1.85
359 360 4.202182 TGTTGCTTAGACGGTGTCTTTAGT 60.202 41.667 4.60 0.00 40.28 2.24
360 361 4.170292 TGCTTAGACGGTGTCTTTAGTC 57.830 45.455 4.60 2.05 40.28 2.59
361 362 3.825014 TGCTTAGACGGTGTCTTTAGTCT 59.175 43.478 4.60 2.50 40.28 3.24
362 363 4.280174 TGCTTAGACGGTGTCTTTAGTCTT 59.720 41.667 4.60 0.00 40.28 3.01
363 364 4.621886 GCTTAGACGGTGTCTTTAGTCTTG 59.378 45.833 4.60 0.00 40.28 3.02
364 365 3.027974 AGACGGTGTCTTTAGTCTTGC 57.972 47.619 0.00 0.00 40.28 4.01
365 366 2.628657 AGACGGTGTCTTTAGTCTTGCT 59.371 45.455 0.00 0.00 40.28 3.91
366 367 2.731976 GACGGTGTCTTTAGTCTTGCTG 59.268 50.000 0.00 0.00 0.00 4.41
367 368 2.102588 ACGGTGTCTTTAGTCTTGCTGT 59.897 45.455 0.00 0.00 0.00 4.40
368 369 3.131396 CGGTGTCTTTAGTCTTGCTGTT 58.869 45.455 0.00 0.00 0.00 3.16
369 370 3.059597 CGGTGTCTTTAGTCTTGCTGTTG 60.060 47.826 0.00 0.00 0.00 3.33
370 371 3.877508 GGTGTCTTTAGTCTTGCTGTTGT 59.122 43.478 0.00 0.00 0.00 3.32
371 372 5.054477 GGTGTCTTTAGTCTTGCTGTTGTA 58.946 41.667 0.00 0.00 0.00 2.41
372 373 5.701290 GGTGTCTTTAGTCTTGCTGTTGTAT 59.299 40.000 0.00 0.00 0.00 2.29
373 374 6.347725 GGTGTCTTTAGTCTTGCTGTTGTATG 60.348 42.308 0.00 0.00 0.00 2.39
374 375 5.700832 TGTCTTTAGTCTTGCTGTTGTATGG 59.299 40.000 0.00 0.00 0.00 2.74
375 376 4.695455 TCTTTAGTCTTGCTGTTGTATGGC 59.305 41.667 0.00 0.00 0.00 4.40
376 377 2.867109 AGTCTTGCTGTTGTATGGCT 57.133 45.000 0.00 0.00 0.00 4.75
377 378 3.146104 AGTCTTGCTGTTGTATGGCTT 57.854 42.857 0.00 0.00 0.00 4.35
378 379 3.490348 AGTCTTGCTGTTGTATGGCTTT 58.510 40.909 0.00 0.00 0.00 3.51
379 380 4.651778 AGTCTTGCTGTTGTATGGCTTTA 58.348 39.130 0.00 0.00 0.00 1.85
380 381 5.256474 AGTCTTGCTGTTGTATGGCTTTAT 58.744 37.500 0.00 0.00 0.00 1.40
381 382 6.414732 AGTCTTGCTGTTGTATGGCTTTATA 58.585 36.000 0.00 0.00 0.00 0.98
382 383 6.884295 AGTCTTGCTGTTGTATGGCTTTATAA 59.116 34.615 0.00 0.00 0.00 0.98
383 384 7.066284 AGTCTTGCTGTTGTATGGCTTTATAAG 59.934 37.037 0.00 0.00 0.00 1.73
384 385 6.318648 TCTTGCTGTTGTATGGCTTTATAAGG 59.681 38.462 0.00 0.00 0.00 2.69
385 386 5.505780 TGCTGTTGTATGGCTTTATAAGGT 58.494 37.500 0.00 0.00 0.00 3.50
386 387 5.588648 TGCTGTTGTATGGCTTTATAAGGTC 59.411 40.000 0.00 0.00 0.00 3.85
387 388 5.823045 GCTGTTGTATGGCTTTATAAGGTCT 59.177 40.000 0.62 0.00 0.00 3.85
388 389 6.318900 GCTGTTGTATGGCTTTATAAGGTCTT 59.681 38.462 0.62 0.00 0.00 3.01
389 390 7.148069 GCTGTTGTATGGCTTTATAAGGTCTTT 60.148 37.037 0.62 0.00 0.00 2.52
390 391 8.644374 TGTTGTATGGCTTTATAAGGTCTTTT 57.356 30.769 0.62 0.00 0.00 2.27
391 392 8.519526 TGTTGTATGGCTTTATAAGGTCTTTTG 58.480 33.333 0.62 0.00 0.00 2.44
392 393 8.736244 GTTGTATGGCTTTATAAGGTCTTTTGA 58.264 33.333 0.62 0.00 0.00 2.69
393 394 8.506168 TGTATGGCTTTATAAGGTCTTTTGAG 57.494 34.615 0.62 0.00 0.00 3.02
394 395 8.325787 TGTATGGCTTTATAAGGTCTTTTGAGA 58.674 33.333 0.62 0.00 0.00 3.27
395 396 9.174166 GTATGGCTTTATAAGGTCTTTTGAGAA 57.826 33.333 0.62 0.00 0.00 2.87
396 397 8.829373 ATGGCTTTATAAGGTCTTTTGAGAAT 57.171 30.769 0.62 0.00 0.00 2.40
397 398 9.920946 ATGGCTTTATAAGGTCTTTTGAGAATA 57.079 29.630 0.62 0.00 0.00 1.75
398 399 9.747898 TGGCTTTATAAGGTCTTTTGAGAATAA 57.252 29.630 0.62 0.00 0.00 1.40
422 423 6.519353 TTAATAAAGTGGTCGTATGCATCG 57.481 37.500 0.19 7.36 0.00 3.84
423 424 1.006832 AAAGTGGTCGTATGCATCGC 58.993 50.000 0.19 0.00 0.00 4.58
424 425 0.810031 AAGTGGTCGTATGCATCGCC 60.810 55.000 0.19 12.43 0.00 5.54
425 426 2.108157 TGGTCGTATGCATCGCCC 59.892 61.111 0.19 7.07 0.00 6.13
426 427 2.108157 GGTCGTATGCATCGCCCA 59.892 61.111 0.19 0.00 0.00 5.36
427 428 1.956170 GGTCGTATGCATCGCCCAG 60.956 63.158 0.19 0.00 0.00 4.45
428 429 1.067416 GTCGTATGCATCGCCCAGA 59.933 57.895 0.19 0.00 0.00 3.86
429 430 0.319900 GTCGTATGCATCGCCCAGAT 60.320 55.000 0.19 0.00 41.01 2.90
437 438 1.449353 ATCGCCCAGATGAAGAGGC 59.551 57.895 0.00 0.00 42.18 4.70
438 439 2.049627 ATCGCCCAGATGAAGAGGCC 62.050 60.000 0.00 0.00 42.66 5.19
439 440 2.203126 GCCCAGATGAAGAGGCCG 60.203 66.667 0.00 0.00 39.60 6.13
440 441 2.507944 CCCAGATGAAGAGGCCGG 59.492 66.667 0.00 0.00 0.00 6.13
441 442 2.507944 CCAGATGAAGAGGCCGGG 59.492 66.667 2.18 0.00 0.00 5.73
442 443 2.507944 CAGATGAAGAGGCCGGGG 59.492 66.667 2.18 0.00 0.00 5.73
443 444 2.041265 AGATGAAGAGGCCGGGGT 59.959 61.111 2.18 0.00 0.00 4.95
444 445 2.066999 AGATGAAGAGGCCGGGGTC 61.067 63.158 2.18 0.00 0.00 4.46
445 446 2.285368 ATGAAGAGGCCGGGGTCA 60.285 61.111 2.18 0.00 0.00 4.02
446 447 1.694169 ATGAAGAGGCCGGGGTCAT 60.694 57.895 2.18 2.58 0.00 3.06
447 448 1.700042 ATGAAGAGGCCGGGGTCATC 61.700 60.000 2.18 0.00 0.00 2.92
448 449 3.090532 AAGAGGCCGGGGTCATCC 61.091 66.667 2.18 0.00 0.00 3.51
449 450 3.642741 AAGAGGCCGGGGTCATCCT 62.643 63.158 2.18 0.00 35.33 3.24
450 451 3.090532 GAGGCCGGGGTCATCCTT 61.091 66.667 2.18 0.00 35.33 3.36
451 452 3.090532 AGGCCGGGGTCATCCTTC 61.091 66.667 2.18 0.00 35.33 3.46
452 453 3.090532 GGCCGGGGTCATCCTTCT 61.091 66.667 2.18 0.00 35.33 2.85
453 454 2.680370 GGCCGGGGTCATCCTTCTT 61.680 63.158 2.18 0.00 35.33 2.52
454 455 1.303282 GCCGGGGTCATCCTTCTTT 59.697 57.895 2.18 0.00 35.33 2.52
455 456 0.323451 GCCGGGGTCATCCTTCTTTT 60.323 55.000 2.18 0.00 35.33 2.27
456 457 1.891011 GCCGGGGTCATCCTTCTTTTT 60.891 52.381 2.18 0.00 35.33 1.94
481 482 8.722342 TTTTAAAAAGCAACTATGTCGATGTC 57.278 30.769 0.00 0.00 0.00 3.06
482 483 4.946784 AAAAGCAACTATGTCGATGTCC 57.053 40.909 0.00 0.00 0.00 4.02
483 484 2.209838 AGCAACTATGTCGATGTCCG 57.790 50.000 0.00 0.00 40.25 4.79
484 485 1.749063 AGCAACTATGTCGATGTCCGA 59.251 47.619 0.00 0.00 46.35 4.55
494 495 3.452755 TCGATGTCCGAATTGCTATGT 57.547 42.857 0.00 0.00 45.43 2.29
495 496 3.792401 TCGATGTCCGAATTGCTATGTT 58.208 40.909 0.00 0.00 45.43 2.71
496 497 4.188462 TCGATGTCCGAATTGCTATGTTT 58.812 39.130 0.00 0.00 45.43 2.83
497 498 4.634004 TCGATGTCCGAATTGCTATGTTTT 59.366 37.500 0.00 0.00 45.43 2.43
498 499 5.123186 TCGATGTCCGAATTGCTATGTTTTT 59.877 36.000 0.00 0.00 45.43 1.94
499 500 6.314152 TCGATGTCCGAATTGCTATGTTTTTA 59.686 34.615 0.00 0.00 45.43 1.52
500 501 7.011950 TCGATGTCCGAATTGCTATGTTTTTAT 59.988 33.333 0.00 0.00 45.43 1.40
501 502 7.112009 CGATGTCCGAATTGCTATGTTTTTATG 59.888 37.037 0.00 0.00 41.76 1.90
502 503 7.151999 TGTCCGAATTGCTATGTTTTTATGT 57.848 32.000 0.00 0.00 0.00 2.29
503 504 7.598278 TGTCCGAATTGCTATGTTTTTATGTT 58.402 30.769 0.00 0.00 0.00 2.71
504 505 8.731605 TGTCCGAATTGCTATGTTTTTATGTTA 58.268 29.630 0.00 0.00 0.00 2.41
505 506 9.730420 GTCCGAATTGCTATGTTTTTATGTTAT 57.270 29.630 0.00 0.00 0.00 1.89
506 507 9.944663 TCCGAATTGCTATGTTTTTATGTTATC 57.055 29.630 0.00 0.00 0.00 1.75
507 508 9.180678 CCGAATTGCTATGTTTTTATGTTATCC 57.819 33.333 0.00 0.00 0.00 2.59
508 509 9.180678 CGAATTGCTATGTTTTTATGTTATCCC 57.819 33.333 0.00 0.00 0.00 3.85
509 510 9.180678 GAATTGCTATGTTTTTATGTTATCCCG 57.819 33.333 0.00 0.00 0.00 5.14
510 511 7.633193 TTGCTATGTTTTTATGTTATCCCGT 57.367 32.000 0.00 0.00 0.00 5.28
511 512 8.734218 TTGCTATGTTTTTATGTTATCCCGTA 57.266 30.769 0.00 0.00 0.00 4.02
512 513 8.911918 TGCTATGTTTTTATGTTATCCCGTAT 57.088 30.769 0.00 0.00 0.00 3.06
513 514 8.779303 TGCTATGTTTTTATGTTATCCCGTATG 58.221 33.333 0.00 0.00 0.00 2.39
514 515 8.995220 GCTATGTTTTTATGTTATCCCGTATGA 58.005 33.333 0.00 0.00 0.00 2.15
517 518 9.793259 ATGTTTTTATGTTATCCCGTATGATCT 57.207 29.630 0.00 0.00 0.00 2.75
539 540 9.539825 GATCTACATACTATGCATGAAATAGGG 57.460 37.037 10.16 9.88 32.81 3.53
540 541 8.435931 TCTACATACTATGCATGAAATAGGGT 57.564 34.615 10.16 13.43 32.81 4.34
541 542 8.880244 TCTACATACTATGCATGAAATAGGGTT 58.120 33.333 10.16 3.25 32.81 4.11
542 543 7.986085 ACATACTATGCATGAAATAGGGTTC 57.014 36.000 10.16 0.00 32.81 3.62
543 544 6.942576 ACATACTATGCATGAAATAGGGTTCC 59.057 38.462 10.16 0.00 32.81 3.62
544 545 4.389374 ACTATGCATGAAATAGGGTTCCG 58.611 43.478 10.16 0.00 32.81 4.30
545 546 3.576078 ATGCATGAAATAGGGTTCCGA 57.424 42.857 0.00 0.00 0.00 4.55
546 547 2.639065 TGCATGAAATAGGGTTCCGAC 58.361 47.619 0.00 0.00 0.00 4.79
547 548 2.238646 TGCATGAAATAGGGTTCCGACT 59.761 45.455 0.00 0.00 0.00 4.18
548 549 3.279434 GCATGAAATAGGGTTCCGACTT 58.721 45.455 0.00 0.00 0.00 3.01
549 550 3.694566 GCATGAAATAGGGTTCCGACTTT 59.305 43.478 0.00 0.00 0.00 2.66
550 551 4.879545 GCATGAAATAGGGTTCCGACTTTA 59.120 41.667 0.00 0.00 0.00 1.85
551 552 5.355910 GCATGAAATAGGGTTCCGACTTTAA 59.644 40.000 0.00 0.00 0.00 1.52
552 553 6.458342 GCATGAAATAGGGTTCCGACTTTAAG 60.458 42.308 0.00 0.00 0.00 1.85
553 554 5.493809 TGAAATAGGGTTCCGACTTTAAGG 58.506 41.667 0.00 0.00 0.00 2.69
554 555 5.013391 TGAAATAGGGTTCCGACTTTAAGGT 59.987 40.000 0.00 0.00 0.00 3.50
555 556 5.509832 AATAGGGTTCCGACTTTAAGGTT 57.490 39.130 0.00 0.00 0.00 3.50
556 557 3.870538 AGGGTTCCGACTTTAAGGTTT 57.129 42.857 0.00 0.00 0.00 3.27
557 558 3.483421 AGGGTTCCGACTTTAAGGTTTG 58.517 45.455 0.00 0.00 0.00 2.93
558 559 3.117776 AGGGTTCCGACTTTAAGGTTTGT 60.118 43.478 0.00 0.00 0.00 2.83
559 560 3.004002 GGGTTCCGACTTTAAGGTTTGTG 59.996 47.826 0.00 0.00 0.00 3.33
560 561 3.549423 GGTTCCGACTTTAAGGTTTGTGC 60.549 47.826 0.00 0.00 0.00 4.57
561 562 3.202829 TCCGACTTTAAGGTTTGTGCT 57.797 42.857 0.00 0.00 0.00 4.40
562 563 3.547746 TCCGACTTTAAGGTTTGTGCTT 58.452 40.909 0.00 0.00 0.00 3.91
563 564 3.562557 TCCGACTTTAAGGTTTGTGCTTC 59.437 43.478 0.00 0.00 0.00 3.86
564 565 3.304458 CCGACTTTAAGGTTTGTGCTTCC 60.304 47.826 0.00 0.00 0.00 3.46
565 566 3.606153 CGACTTTAAGGTTTGTGCTTCCG 60.606 47.826 0.00 0.00 0.00 4.30
566 567 2.621526 ACTTTAAGGTTTGTGCTTCCGG 59.378 45.455 0.00 0.00 0.00 5.14
567 568 2.642154 TTAAGGTTTGTGCTTCCGGA 57.358 45.000 0.00 0.00 0.00 5.14
568 569 2.178912 TAAGGTTTGTGCTTCCGGAG 57.821 50.000 3.34 0.00 0.00 4.63
581 582 3.200522 CGGAGGGAGCAAAATGGC 58.799 61.111 0.00 0.00 0.00 4.40
583 584 0.967380 CGGAGGGAGCAAAATGGCTT 60.967 55.000 0.00 0.00 45.99 4.35
584 585 1.681780 CGGAGGGAGCAAAATGGCTTA 60.682 52.381 0.00 0.00 45.99 3.09
585 586 2.670939 GGAGGGAGCAAAATGGCTTAT 58.329 47.619 0.00 0.00 45.99 1.73
586 587 2.363359 GGAGGGAGCAAAATGGCTTATG 59.637 50.000 0.00 0.00 45.99 1.90
587 588 3.026694 GAGGGAGCAAAATGGCTTATGT 58.973 45.455 0.00 0.00 45.99 2.29
588 589 3.026694 AGGGAGCAAAATGGCTTATGTC 58.973 45.455 0.00 0.00 45.99 3.06
589 590 2.101415 GGGAGCAAAATGGCTTATGTCC 59.899 50.000 0.00 0.00 45.99 4.02
590 591 2.760092 GGAGCAAAATGGCTTATGTCCA 59.240 45.455 0.00 0.00 45.99 4.02
591 592 3.181483 GGAGCAAAATGGCTTATGTCCAG 60.181 47.826 0.00 0.00 45.99 3.86
592 593 2.167075 AGCAAAATGGCTTATGTCCAGC 59.833 45.455 0.00 0.00 42.71 4.85
593 594 2.801063 CAAAATGGCTTATGTCCAGCG 58.199 47.619 0.00 0.00 38.24 5.18
594 595 1.392589 AAATGGCTTATGTCCAGCGG 58.607 50.000 0.00 0.00 38.24 5.52
595 596 0.546122 AATGGCTTATGTCCAGCGGA 59.454 50.000 0.00 0.00 38.24 5.54
610 611 4.754667 GGACGTGCCCGGACTTCC 62.755 72.222 0.73 2.48 38.78 3.46
611 612 3.998672 GACGTGCCCGGACTTCCA 61.999 66.667 0.73 0.00 38.78 3.53
612 613 3.524648 GACGTGCCCGGACTTCCAA 62.525 63.158 0.73 0.00 38.78 3.53
613 614 2.742372 CGTGCCCGGACTTCCAAG 60.742 66.667 0.73 0.00 35.14 3.61
614 615 2.430367 GTGCCCGGACTTCCAAGT 59.570 61.111 0.73 0.00 43.16 3.16
615 616 1.228154 GTGCCCGGACTTCCAAGTT 60.228 57.895 0.73 0.00 39.88 2.66
616 617 1.072505 TGCCCGGACTTCCAAGTTC 59.927 57.895 0.73 0.00 39.88 3.01
617 618 1.674651 GCCCGGACTTCCAAGTTCC 60.675 63.158 0.73 0.00 39.88 3.62
618 619 1.758592 CCCGGACTTCCAAGTTCCA 59.241 57.895 0.73 0.00 39.88 3.53
619 620 0.109723 CCCGGACTTCCAAGTTCCAA 59.890 55.000 0.73 0.00 39.88 3.53
620 621 1.235724 CCGGACTTCCAAGTTCCAAC 58.764 55.000 0.00 0.00 39.88 3.77
621 622 1.235724 CGGACTTCCAAGTTCCAACC 58.764 55.000 0.00 0.00 39.88 3.77
622 623 1.617322 GGACTTCCAAGTTCCAACCC 58.383 55.000 0.00 0.00 39.88 4.11
623 624 1.617322 GACTTCCAAGTTCCAACCCC 58.383 55.000 0.00 0.00 39.88 4.95
624 625 0.187606 ACTTCCAAGTTCCAACCCCC 59.812 55.000 0.00 0.00 35.21 5.40
625 626 0.482887 CTTCCAAGTTCCAACCCCCT 59.517 55.000 0.00 0.00 0.00 4.79
626 627 0.481128 TTCCAAGTTCCAACCCCCTC 59.519 55.000 0.00 0.00 0.00 4.30
627 628 1.076727 CCAAGTTCCAACCCCCTCC 59.923 63.158 0.00 0.00 0.00 4.30
628 629 1.076727 CAAGTTCCAACCCCCTCCC 59.923 63.158 0.00 0.00 0.00 4.30
629 630 2.167729 AAGTTCCAACCCCCTCCCC 61.168 63.158 0.00 0.00 0.00 4.81
630 631 3.669230 GTTCCAACCCCCTCCCCC 61.669 72.222 0.00 0.00 0.00 5.40
646 647 4.436998 CCGTGTGGGTCTCTCGCC 62.437 72.222 0.00 0.00 0.00 5.54
647 648 4.436998 CGTGTGGGTCTCTCGCCC 62.437 72.222 0.00 0.00 46.26 6.13
652 653 2.047179 GGGTCTCTCGCCCAACAC 60.047 66.667 0.00 0.00 45.40 3.32
653 654 2.432628 GGTCTCTCGCCCAACACG 60.433 66.667 0.00 0.00 0.00 4.49
654 655 3.112709 GTCTCTCGCCCAACACGC 61.113 66.667 0.00 0.00 0.00 5.34
693 694 3.653009 CACCTGCCCGCGCATATG 61.653 66.667 8.75 0.00 46.11 1.78
700 701 3.572539 CCGCGCATATGCCGTGTT 61.573 61.111 26.16 0.00 37.91 3.32
701 702 2.241190 CCGCGCATATGCCGTGTTA 61.241 57.895 26.16 0.00 37.91 2.41
702 703 1.639000 CGCGCATATGCCGTGTTAA 59.361 52.632 21.77 0.00 37.91 2.01
703 704 0.653323 CGCGCATATGCCGTGTTAAC 60.653 55.000 21.77 0.00 37.91 2.01
704 705 0.655733 GCGCATATGCCGTGTTAACT 59.344 50.000 21.77 0.00 37.91 2.24
705 706 1.332904 GCGCATATGCCGTGTTAACTC 60.333 52.381 21.77 2.10 37.91 3.01
706 707 2.201732 CGCATATGCCGTGTTAACTCT 58.798 47.619 21.77 0.00 37.91 3.24
707 708 2.218759 CGCATATGCCGTGTTAACTCTC 59.781 50.000 21.77 0.00 37.91 3.20
708 709 3.194861 GCATATGCCGTGTTAACTCTCA 58.805 45.455 17.26 4.81 34.31 3.27
709 710 3.001330 GCATATGCCGTGTTAACTCTCAC 59.999 47.826 17.26 0.00 34.31 3.51
731 734 8.054152 TCACGTGTACATGGACTTATTTAGTA 57.946 34.615 19.05 0.00 37.17 1.82
759 762 1.335780 TGCAATACAAGCAGCCAAACG 60.336 47.619 0.00 0.00 37.02 3.60
768 771 2.972505 AGCCAAACGGAGCACACG 60.973 61.111 0.00 0.00 37.36 4.49
899 904 1.076332 ATCTCGCTAACACAAACCGC 58.924 50.000 0.00 0.00 0.00 5.68
968 973 3.739519 CGGCAACCACTTCCATTTCAAAA 60.740 43.478 0.00 0.00 0.00 2.44
1317 1356 1.617018 CCTCCGCCAGATTCACTCCA 61.617 60.000 0.00 0.00 0.00 3.86
1321 1360 0.247460 CGCCAGATTCACTCCACTCA 59.753 55.000 0.00 0.00 0.00 3.41
1412 1475 0.038166 ATCAAACACCGGAGCACCAT 59.962 50.000 9.46 0.00 35.59 3.55
1477 1543 2.743718 CCAAGGAGCACCACGACT 59.256 61.111 2.07 0.00 38.94 4.18
1498 1564 2.511600 CCGACGGCACCATCCTTC 60.512 66.667 0.00 0.00 0.00 3.46
2243 2319 0.953727 CTTGTGTGTGACCATGGTGG 59.046 55.000 25.52 0.00 45.02 4.61
2669 3381 7.577303 ACATTCACCACTCATTAACTCCATAT 58.423 34.615 0.00 0.00 0.00 1.78
2872 3640 8.801715 TTTATTTCACTTTCATTGCTTCTGTC 57.198 30.769 0.00 0.00 0.00 3.51
2929 3702 6.798482 TCTATTGCCTTGCACATATTTTCTG 58.202 36.000 0.00 0.00 38.71 3.02
3045 3821 4.502962 GTTCTGAGATCACAGGAAAGGAG 58.497 47.826 18.49 0.00 38.31 3.69
3050 3826 2.900546 AGATCACAGGAAAGGAGTCGTT 59.099 45.455 0.00 0.00 0.00 3.85
3103 3879 4.603131 AGAAGCTTTGATAAAGGATGGCA 58.397 39.130 0.00 0.00 38.93 4.92
3286 4068 8.439286 GTGAATTCTACAGACAGAAGATCAAAC 58.561 37.037 7.05 0.00 37.93 2.93
3446 4233 6.824305 AGGTTTCTGAATAAACACTGATGG 57.176 37.500 0.00 0.00 40.42 3.51
3447 4234 6.306987 AGGTTTCTGAATAAACACTGATGGT 58.693 36.000 0.00 0.00 40.42 3.55
3657 4450 6.843752 TGTGGTAACTTCCTTAGATTTTCCA 58.156 36.000 0.00 0.00 37.61 3.53
3676 4469 2.607635 CCATACACCGTGATGCTTGTAC 59.392 50.000 5.28 0.00 0.00 2.90
3754 4553 3.818787 CACCTGCCGGCTGATTGC 61.819 66.667 32.43 2.39 41.94 3.56
4361 5194 7.597743 AGATTATTATACGCAAGGTTTAGTCGG 59.402 37.037 0.00 0.00 46.39 4.79
4404 5237 5.048013 CCAAAACTAGGGATTTCTCCAACAC 60.048 44.000 0.00 0.00 44.08 3.32
4405 5238 5.584551 AAACTAGGGATTTCTCCAACACT 57.415 39.130 0.00 0.00 44.08 3.55
4406 5239 6.697641 AAACTAGGGATTTCTCCAACACTA 57.302 37.500 0.00 0.00 44.08 2.74
4407 5240 5.678955 ACTAGGGATTTCTCCAACACTAC 57.321 43.478 0.00 0.00 44.08 2.73
4408 5241 4.470304 ACTAGGGATTTCTCCAACACTACC 59.530 45.833 0.00 0.00 44.08 3.18
4409 5242 3.256704 AGGGATTTCTCCAACACTACCA 58.743 45.455 0.00 0.00 44.08 3.25
4410 5243 3.264450 AGGGATTTCTCCAACACTACCAG 59.736 47.826 0.00 0.00 44.08 4.00
4411 5244 3.263425 GGGATTTCTCCAACACTACCAGA 59.737 47.826 0.00 0.00 44.08 3.86
4412 5245 4.263331 GGGATTTCTCCAACACTACCAGAA 60.263 45.833 0.00 0.00 44.08 3.02
4413 5246 5.313712 GGATTTCTCCAACACTACCAGAAA 58.686 41.667 0.00 0.00 41.64 2.52
4414 5247 5.181433 GGATTTCTCCAACACTACCAGAAAC 59.819 44.000 0.00 0.00 41.64 2.78
4415 5248 5.367945 TTTCTCCAACACTACCAGAAACT 57.632 39.130 0.00 0.00 29.99 2.66
4416 5249 4.336889 TCTCCAACACTACCAGAAACTG 57.663 45.455 0.00 0.00 0.00 3.16
4430 5263 5.520376 CAGAAACTGGATTTTTCCTGTGT 57.480 39.130 5.46 0.44 40.95 3.72
4431 5264 5.284079 CAGAAACTGGATTTTTCCTGTGTG 58.716 41.667 5.46 1.71 40.95 3.82
4432 5265 4.956075 AGAAACTGGATTTTTCCTGTGTGT 59.044 37.500 5.46 0.00 40.95 3.72
4433 5266 5.422012 AGAAACTGGATTTTTCCTGTGTGTT 59.578 36.000 5.46 0.00 40.95 3.32
4434 5267 6.605594 AGAAACTGGATTTTTCCTGTGTGTTA 59.394 34.615 5.46 0.00 40.95 2.41
4435 5268 6.976934 AACTGGATTTTTCCTGTGTGTTAT 57.023 33.333 5.46 0.00 40.95 1.89
4436 5269 8.472007 AAACTGGATTTTTCCTGTGTGTTATA 57.528 30.769 5.46 0.00 40.95 0.98
4437 5270 7.448748 ACTGGATTTTTCCTGTGTGTTATAC 57.551 36.000 4.03 0.00 39.88 1.47
4438 5271 6.433093 ACTGGATTTTTCCTGTGTGTTATACC 59.567 38.462 4.03 0.00 39.88 2.73
4439 5272 6.548321 TGGATTTTTCCTGTGTGTTATACCT 58.452 36.000 0.00 0.00 0.00 3.08
4440 5273 7.007723 TGGATTTTTCCTGTGTGTTATACCTT 58.992 34.615 0.00 0.00 0.00 3.50
4441 5274 7.507616 TGGATTTTTCCTGTGTGTTATACCTTT 59.492 33.333 0.00 0.00 0.00 3.11
4442 5275 8.364894 GGATTTTTCCTGTGTGTTATACCTTTT 58.635 33.333 0.00 0.00 0.00 2.27
4443 5276 9.406828 GATTTTTCCTGTGTGTTATACCTTTTC 57.593 33.333 0.00 0.00 0.00 2.29
4444 5277 6.887626 TTTCCTGTGTGTTATACCTTTTCC 57.112 37.500 0.00 0.00 0.00 3.13
4445 5278 5.836024 TCCTGTGTGTTATACCTTTTCCT 57.164 39.130 0.00 0.00 0.00 3.36
4446 5279 5.556915 TCCTGTGTGTTATACCTTTTCCTG 58.443 41.667 0.00 0.00 0.00 3.86
4447 5280 5.072600 TCCTGTGTGTTATACCTTTTCCTGT 59.927 40.000 0.00 0.00 0.00 4.00
4448 5281 5.411669 CCTGTGTGTTATACCTTTTCCTGTC 59.588 44.000 0.00 0.00 0.00 3.51
4449 5282 4.992319 TGTGTGTTATACCTTTTCCTGTCG 59.008 41.667 0.00 0.00 0.00 4.35
4450 5283 4.390909 GTGTGTTATACCTTTTCCTGTCGG 59.609 45.833 0.00 0.00 0.00 4.79
4451 5284 3.937079 GTGTTATACCTTTTCCTGTCGGG 59.063 47.826 0.00 0.00 0.00 5.14
4452 5285 3.583966 TGTTATACCTTTTCCTGTCGGGT 59.416 43.478 0.00 0.00 36.25 5.28
4453 5286 2.781681 ATACCTTTTCCTGTCGGGTG 57.218 50.000 0.00 0.00 36.25 4.61
4454 5287 1.719529 TACCTTTTCCTGTCGGGTGA 58.280 50.000 0.00 0.00 36.25 4.02
4455 5288 0.841289 ACCTTTTCCTGTCGGGTGAA 59.159 50.000 0.00 0.00 36.25 3.18
4456 5289 1.213430 ACCTTTTCCTGTCGGGTGAAA 59.787 47.619 0.00 0.35 36.25 2.69
4457 5290 2.303175 CCTTTTCCTGTCGGGTGAAAA 58.697 47.619 0.00 0.00 36.74 2.29
4458 5291 2.034179 CCTTTTCCTGTCGGGTGAAAAC 59.966 50.000 0.00 0.00 35.02 2.43
4459 5292 2.721425 TTTCCTGTCGGGTGAAAACT 57.279 45.000 0.00 0.00 36.25 2.66
4460 5293 2.249844 TTCCTGTCGGGTGAAAACTC 57.750 50.000 0.00 0.00 36.25 3.01
4461 5294 1.124780 TCCTGTCGGGTGAAAACTCA 58.875 50.000 0.00 0.00 36.25 3.41
4462 5295 1.202604 TCCTGTCGGGTGAAAACTCAC 60.203 52.381 0.00 0.00 39.73 3.51
4463 5296 1.474320 CCTGTCGGGTGAAAACTCACA 60.474 52.381 7.51 0.00 42.07 3.58
4464 5297 1.867233 CTGTCGGGTGAAAACTCACAG 59.133 52.381 7.51 1.56 42.07 3.66
4465 5298 1.483004 TGTCGGGTGAAAACTCACAGA 59.517 47.619 7.51 3.69 42.07 3.41
4466 5299 2.093394 TGTCGGGTGAAAACTCACAGAA 60.093 45.455 7.51 0.00 42.07 3.02
4467 5300 2.940410 GTCGGGTGAAAACTCACAGAAA 59.060 45.455 7.51 0.00 42.07 2.52
4468 5301 3.375922 GTCGGGTGAAAACTCACAGAAAA 59.624 43.478 7.51 0.00 42.07 2.29
4469 5302 4.011023 TCGGGTGAAAACTCACAGAAAAA 58.989 39.130 7.51 0.00 42.07 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.806856 CTCCGAATCTGCACTGCGC 61.807 63.158 0.00 0.00 42.89 6.09
1 2 1.016130 AACTCCGAATCTGCACTGCG 61.016 55.000 0.00 0.00 0.00 5.18
4 5 0.737715 GCGAACTCCGAATCTGCACT 60.738 55.000 0.00 0.00 41.76 4.40
5 6 0.737715 AGCGAACTCCGAATCTGCAC 60.738 55.000 0.00 0.00 41.76 4.57
6 7 0.737367 CAGCGAACTCCGAATCTGCA 60.737 55.000 0.00 0.00 41.76 4.41
7 8 0.737715 ACAGCGAACTCCGAATCTGC 60.738 55.000 0.00 0.00 41.76 4.26
8 9 0.994995 CACAGCGAACTCCGAATCTG 59.005 55.000 0.00 0.00 41.76 2.90
9 10 0.108615 CCACAGCGAACTCCGAATCT 60.109 55.000 0.00 0.00 41.76 2.40
10 11 1.084370 CCCACAGCGAACTCCGAATC 61.084 60.000 0.00 0.00 41.76 2.52
11 12 1.079127 CCCACAGCGAACTCCGAAT 60.079 57.895 0.00 0.00 41.76 3.34
12 13 2.154798 CTCCCACAGCGAACTCCGAA 62.155 60.000 0.00 0.00 41.76 4.30
13 14 2.599281 TCCCACAGCGAACTCCGA 60.599 61.111 0.00 0.00 41.76 4.55
15 16 1.617947 ATCCTCCCACAGCGAACTCC 61.618 60.000 0.00 0.00 0.00 3.85
16 17 0.460987 CATCCTCCCACAGCGAACTC 60.461 60.000 0.00 0.00 0.00 3.01
17 18 1.599047 CATCCTCCCACAGCGAACT 59.401 57.895 0.00 0.00 0.00 3.01
18 19 1.450312 CCATCCTCCCACAGCGAAC 60.450 63.158 0.00 0.00 0.00 3.95
19 20 1.612146 TCCATCCTCCCACAGCGAA 60.612 57.895 0.00 0.00 0.00 4.70
20 21 2.038813 TCCATCCTCCCACAGCGA 59.961 61.111 0.00 0.00 0.00 4.93
21 22 2.187946 GTCCATCCTCCCACAGCG 59.812 66.667 0.00 0.00 0.00 5.18
22 23 1.524482 GAGTCCATCCTCCCACAGC 59.476 63.158 0.00 0.00 0.00 4.40
23 24 1.819229 CGAGTCCATCCTCCCACAG 59.181 63.158 0.00 0.00 0.00 3.66
24 25 2.359169 GCGAGTCCATCCTCCCACA 61.359 63.158 0.00 0.00 0.00 4.17
25 26 2.501610 GCGAGTCCATCCTCCCAC 59.498 66.667 0.00 0.00 0.00 4.61
26 27 3.147595 CGCGAGTCCATCCTCCCA 61.148 66.667 0.00 0.00 0.00 4.37
27 28 4.593864 GCGCGAGTCCATCCTCCC 62.594 72.222 12.10 0.00 0.00 4.30
28 29 3.781770 CTGCGCGAGTCCATCCTCC 62.782 68.421 12.10 0.00 0.00 4.30
29 30 2.279120 CTGCGCGAGTCCATCCTC 60.279 66.667 12.10 0.00 0.00 3.71
30 31 3.842923 CCTGCGCGAGTCCATCCT 61.843 66.667 12.10 0.00 0.00 3.24
31 32 3.781770 CTCCTGCGCGAGTCCATCC 62.782 68.421 12.10 0.00 0.00 3.51
32 33 2.279120 CTCCTGCGCGAGTCCATC 60.279 66.667 12.10 0.00 0.00 3.51
33 34 3.842923 CCTCCTGCGCGAGTCCAT 61.843 66.667 12.10 0.00 0.00 3.41
35 36 4.500116 GTCCTCCTGCGCGAGTCC 62.500 72.222 12.10 0.00 0.00 3.85
36 37 4.838486 CGTCCTCCTGCGCGAGTC 62.838 72.222 12.10 0.00 0.00 3.36
38 39 4.838486 GTCGTCCTCCTGCGCGAG 62.838 72.222 12.10 3.83 33.90 5.03
43 44 3.973267 GACAGCGTCGTCCTCCTGC 62.973 68.421 0.00 0.00 0.00 4.85
44 45 2.179517 GACAGCGTCGTCCTCCTG 59.820 66.667 0.00 0.00 0.00 3.86
66 67 1.585521 CTATCGACGCCACCACGAC 60.586 63.158 0.00 0.00 38.79 4.34
67 68 2.795973 CTATCGACGCCACCACGA 59.204 61.111 0.00 0.00 40.18 4.35
68 69 2.954868 GCTATCGACGCCACCACG 60.955 66.667 0.00 0.00 39.50 4.94
69 70 1.878522 CTGCTATCGACGCCACCAC 60.879 63.158 6.12 0.00 0.00 4.16
70 71 2.004808 CTCTGCTATCGACGCCACCA 62.005 60.000 6.12 0.00 0.00 4.17
71 72 1.299468 CTCTGCTATCGACGCCACC 60.299 63.158 6.12 0.00 0.00 4.61
72 73 0.317436 CTCTCTGCTATCGACGCCAC 60.317 60.000 6.12 0.00 0.00 5.01
73 74 0.463833 TCTCTCTGCTATCGACGCCA 60.464 55.000 6.12 0.00 0.00 5.69
74 75 0.040781 GTCTCTCTGCTATCGACGCC 60.041 60.000 6.12 0.00 0.00 5.68
75 76 0.040781 GGTCTCTCTGCTATCGACGC 60.041 60.000 1.78 1.78 0.00 5.19
76 77 1.262950 CAGGTCTCTCTGCTATCGACG 59.737 57.143 0.00 0.00 0.00 5.12
77 78 1.606668 CCAGGTCTCTCTGCTATCGAC 59.393 57.143 0.00 0.00 33.64 4.20
78 79 1.974265 CCAGGTCTCTCTGCTATCGA 58.026 55.000 0.00 0.00 33.64 3.59
79 80 0.313672 GCCAGGTCTCTCTGCTATCG 59.686 60.000 0.00 0.00 33.64 2.92
80 81 1.068434 GTGCCAGGTCTCTCTGCTATC 59.932 57.143 0.00 0.00 33.64 2.08
81 82 1.118838 GTGCCAGGTCTCTCTGCTAT 58.881 55.000 0.00 0.00 33.64 2.97
82 83 1.315981 CGTGCCAGGTCTCTCTGCTA 61.316 60.000 0.00 0.00 33.64 3.49
83 84 2.644212 CGTGCCAGGTCTCTCTGCT 61.644 63.158 0.00 0.00 33.64 4.24
84 85 2.125753 CGTGCCAGGTCTCTCTGC 60.126 66.667 0.00 0.00 33.64 4.26
85 86 0.965866 TACCGTGCCAGGTCTCTCTG 60.966 60.000 3.27 0.00 44.68 3.35
86 87 0.966370 GTACCGTGCCAGGTCTCTCT 60.966 60.000 3.27 0.00 44.68 3.10
87 88 1.248785 TGTACCGTGCCAGGTCTCTC 61.249 60.000 3.27 0.00 44.68 3.20
88 89 0.614979 ATGTACCGTGCCAGGTCTCT 60.615 55.000 3.27 0.00 44.68 3.10
89 90 0.460284 CATGTACCGTGCCAGGTCTC 60.460 60.000 3.27 0.69 44.68 3.36
90 91 1.596934 CATGTACCGTGCCAGGTCT 59.403 57.895 3.27 0.00 44.68 3.85
91 92 2.106683 GCATGTACCGTGCCAGGTC 61.107 63.158 3.27 0.00 44.68 3.85
92 93 2.404566 TTGCATGTACCGTGCCAGGT 62.405 55.000 15.25 5.51 44.81 4.00
93 94 1.673993 TTGCATGTACCGTGCCAGG 60.674 57.895 15.25 0.00 44.81 4.45
94 95 1.233950 TGTTGCATGTACCGTGCCAG 61.234 55.000 15.25 0.00 44.81 4.85
95 96 1.227973 TGTTGCATGTACCGTGCCA 60.228 52.632 15.25 4.40 44.81 4.92
96 97 1.234615 ACTGTTGCATGTACCGTGCC 61.235 55.000 15.25 4.45 44.81 5.01
97 98 1.127951 GTACTGTTGCATGTACCGTGC 59.872 52.381 12.07 12.07 45.53 5.34
98 99 2.409012 TGTACTGTTGCATGTACCGTG 58.591 47.619 16.95 0.00 38.48 4.94
99 100 2.683968 CTGTACTGTTGCATGTACCGT 58.316 47.619 16.95 6.15 38.48 4.83
100 101 1.393539 GCTGTACTGTTGCATGTACCG 59.606 52.381 16.95 13.51 38.48 4.02
101 102 2.673368 GAGCTGTACTGTTGCATGTACC 59.327 50.000 16.95 7.52 38.48 3.34
102 103 3.369147 CAGAGCTGTACTGTTGCATGTAC 59.631 47.826 14.38 14.38 39.37 2.90
103 104 3.258123 TCAGAGCTGTACTGTTGCATGTA 59.742 43.478 0.00 0.00 36.81 2.29
104 105 2.037641 TCAGAGCTGTACTGTTGCATGT 59.962 45.455 0.00 0.00 36.81 3.21
105 106 2.691927 TCAGAGCTGTACTGTTGCATG 58.308 47.619 0.00 0.00 36.81 4.06
106 107 3.007290 TCTTCAGAGCTGTACTGTTGCAT 59.993 43.478 0.00 0.00 36.81 3.96
107 108 2.365293 TCTTCAGAGCTGTACTGTTGCA 59.635 45.455 0.00 0.00 36.81 4.08
108 109 3.032017 TCTTCAGAGCTGTACTGTTGC 57.968 47.619 0.00 0.00 36.81 4.17
109 110 3.931468 CCATCTTCAGAGCTGTACTGTTG 59.069 47.826 0.00 0.00 36.81 3.33
110 111 3.834813 TCCATCTTCAGAGCTGTACTGTT 59.165 43.478 0.00 0.00 36.81 3.16
111 112 3.435275 TCCATCTTCAGAGCTGTACTGT 58.565 45.455 0.00 0.00 36.81 3.55
112 113 4.669206 ATCCATCTTCAGAGCTGTACTG 57.331 45.455 0.00 0.00 36.80 2.74
113 114 4.141756 CCAATCCATCTTCAGAGCTGTACT 60.142 45.833 0.00 0.00 0.00 2.73
114 115 4.125703 CCAATCCATCTTCAGAGCTGTAC 58.874 47.826 0.00 0.00 0.00 2.90
115 116 3.776969 ACCAATCCATCTTCAGAGCTGTA 59.223 43.478 0.00 0.00 0.00 2.74
116 117 2.575279 ACCAATCCATCTTCAGAGCTGT 59.425 45.455 0.00 0.00 0.00 4.40
117 118 2.943690 CACCAATCCATCTTCAGAGCTG 59.056 50.000 0.00 0.00 0.00 4.24
118 119 2.092538 CCACCAATCCATCTTCAGAGCT 60.093 50.000 0.00 0.00 0.00 4.09
119 120 2.295885 CCACCAATCCATCTTCAGAGC 58.704 52.381 0.00 0.00 0.00 4.09
120 121 2.295885 GCCACCAATCCATCTTCAGAG 58.704 52.381 0.00 0.00 0.00 3.35
121 122 1.634973 TGCCACCAATCCATCTTCAGA 59.365 47.619 0.00 0.00 0.00 3.27
122 123 2.022195 CTGCCACCAATCCATCTTCAG 58.978 52.381 0.00 0.00 0.00 3.02
123 124 1.341285 CCTGCCACCAATCCATCTTCA 60.341 52.381 0.00 0.00 0.00 3.02
124 125 1.341383 ACCTGCCACCAATCCATCTTC 60.341 52.381 0.00 0.00 0.00 2.87
125 126 0.706433 ACCTGCCACCAATCCATCTT 59.294 50.000 0.00 0.00 0.00 2.40
126 127 0.033796 CACCTGCCACCAATCCATCT 60.034 55.000 0.00 0.00 0.00 2.90
127 128 0.034186 TCACCTGCCACCAATCCATC 60.034 55.000 0.00 0.00 0.00 3.51
128 129 0.323725 GTCACCTGCCACCAATCCAT 60.324 55.000 0.00 0.00 0.00 3.41
129 130 1.074775 GTCACCTGCCACCAATCCA 59.925 57.895 0.00 0.00 0.00 3.41
130 131 0.962356 CAGTCACCTGCCACCAATCC 60.962 60.000 0.00 0.00 0.00 3.01
131 132 2.559785 CAGTCACCTGCCACCAATC 58.440 57.895 0.00 0.00 0.00 2.67
132 133 4.828409 CAGTCACCTGCCACCAAT 57.172 55.556 0.00 0.00 0.00 3.16
145 146 4.221422 TATGAGGCCGCCGCAGTC 62.221 66.667 21.00 5.73 36.65 3.51
146 147 4.530857 GTATGAGGCCGCCGCAGT 62.531 66.667 21.00 11.60 36.65 4.40
156 157 4.609018 CGCCTGCCGGGTATGAGG 62.609 72.222 2.18 0.00 37.43 3.86
157 158 3.792053 GACGCCTGCCGGGTATGAG 62.792 68.421 2.18 0.00 42.52 2.90
158 159 3.845259 GACGCCTGCCGGGTATGA 61.845 66.667 2.18 0.00 42.52 2.15
159 160 4.910585 GGACGCCTGCCGGGTATG 62.911 72.222 2.18 0.00 42.52 2.39
175 176 2.743928 GCGCACTCCTCAACCAGG 60.744 66.667 0.30 0.00 45.15 4.45
176 177 2.031516 CAGCGCACTCCTCAACCAG 61.032 63.158 11.47 0.00 0.00 4.00
177 178 2.031012 CAGCGCACTCCTCAACCA 59.969 61.111 11.47 0.00 0.00 3.67
178 179 2.743928 CCAGCGCACTCCTCAACC 60.744 66.667 11.47 0.00 0.00 3.77
179 180 2.029844 GTCCAGCGCACTCCTCAAC 61.030 63.158 11.47 0.00 0.00 3.18
180 181 2.210013 AGTCCAGCGCACTCCTCAA 61.210 57.895 11.47 0.00 0.00 3.02
181 182 2.601666 AGTCCAGCGCACTCCTCA 60.602 61.111 11.47 0.00 0.00 3.86
182 183 2.125753 CAGTCCAGCGCACTCCTC 60.126 66.667 11.47 0.00 0.00 3.71
183 184 3.699894 CCAGTCCAGCGCACTCCT 61.700 66.667 11.47 0.00 0.00 3.69
184 185 2.564553 CTACCAGTCCAGCGCACTCC 62.565 65.000 11.47 0.00 0.00 3.85
185 186 1.153745 CTACCAGTCCAGCGCACTC 60.154 63.158 11.47 0.00 0.00 3.51
186 187 2.650116 CCTACCAGTCCAGCGCACT 61.650 63.158 11.47 0.33 0.00 4.40
187 188 2.125512 CCTACCAGTCCAGCGCAC 60.126 66.667 11.47 0.00 0.00 5.34
188 189 2.603473 ACCTACCAGTCCAGCGCA 60.603 61.111 11.47 0.00 0.00 6.09
189 190 2.125512 CACCTACCAGTCCAGCGC 60.126 66.667 0.00 0.00 0.00 5.92
190 191 2.125512 GCACCTACCAGTCCAGCG 60.126 66.667 0.00 0.00 0.00 5.18
191 192 2.269241 GGCACCTACCAGTCCAGC 59.731 66.667 0.00 0.00 0.00 4.85
209 210 4.910585 GACGCCTGCCGGGTATGG 62.911 72.222 2.18 0.00 42.52 2.74
210 211 4.910585 GGACGCCTGCCGGGTATG 62.911 72.222 2.18 0.00 42.52 2.39
211 212 3.744003 TAGGACGCCTGCCGGGTAT 62.744 63.158 2.18 0.00 42.52 2.73
212 213 4.445710 TAGGACGCCTGCCGGGTA 62.446 66.667 2.18 0.00 42.52 3.69
215 216 3.771160 AACTAGGACGCCTGCCGG 61.771 66.667 0.00 0.00 42.52 6.13
216 217 2.509336 CAACTAGGACGCCTGCCG 60.509 66.667 8.44 0.91 44.21 5.69
217 218 2.125106 CCAACTAGGACGCCTGCC 60.125 66.667 8.44 0.00 41.22 4.85
218 219 2.125106 CCCAACTAGGACGCCTGC 60.125 66.667 8.44 0.00 41.22 4.85
219 220 1.218316 GTCCCAACTAGGACGCCTG 59.782 63.158 8.44 2.37 46.57 4.85
220 221 3.709567 GTCCCAACTAGGACGCCT 58.290 61.111 3.87 3.87 46.57 5.52
225 226 1.001248 CCCGAGGTCCCAACTAGGA 59.999 63.158 0.00 0.00 41.22 2.94
226 227 1.305887 ACCCGAGGTCCCAACTAGG 60.306 63.158 0.00 0.00 37.03 3.02
227 228 2.200052 GACCCGAGGTCCCAACTAG 58.800 63.158 10.92 0.00 46.19 2.57
228 229 4.447734 GACCCGAGGTCCCAACTA 57.552 61.111 10.92 0.00 46.19 2.24
236 237 4.287845 ACCTAAACATTTAAGACCCGAGGT 59.712 41.667 0.00 0.00 39.44 3.85
237 238 4.840271 ACCTAAACATTTAAGACCCGAGG 58.160 43.478 0.00 0.00 0.00 4.63
238 239 6.349033 CCAAACCTAAACATTTAAGACCCGAG 60.349 42.308 0.00 0.00 0.00 4.63
239 240 5.474189 CCAAACCTAAACATTTAAGACCCGA 59.526 40.000 0.00 0.00 0.00 5.14
240 241 5.705902 CCAAACCTAAACATTTAAGACCCG 58.294 41.667 0.00 0.00 0.00 5.28
241 242 5.245301 AGCCAAACCTAAACATTTAAGACCC 59.755 40.000 0.00 0.00 0.00 4.46
242 243 6.156519 CAGCCAAACCTAAACATTTAAGACC 58.843 40.000 0.00 0.00 0.00 3.85
243 244 5.633601 GCAGCCAAACCTAAACATTTAAGAC 59.366 40.000 0.00 0.00 0.00 3.01
244 245 5.563867 CGCAGCCAAACCTAAACATTTAAGA 60.564 40.000 0.00 0.00 0.00 2.10
245 246 4.621034 CGCAGCCAAACCTAAACATTTAAG 59.379 41.667 0.00 0.00 0.00 1.85
246 247 4.278669 TCGCAGCCAAACCTAAACATTTAA 59.721 37.500 0.00 0.00 0.00 1.52
247 248 3.821600 TCGCAGCCAAACCTAAACATTTA 59.178 39.130 0.00 0.00 0.00 1.40
248 249 2.625790 TCGCAGCCAAACCTAAACATTT 59.374 40.909 0.00 0.00 0.00 2.32
249 250 2.235016 TCGCAGCCAAACCTAAACATT 58.765 42.857 0.00 0.00 0.00 2.71
250 251 1.904287 TCGCAGCCAAACCTAAACAT 58.096 45.000 0.00 0.00 0.00 2.71
251 252 1.539388 CATCGCAGCCAAACCTAAACA 59.461 47.619 0.00 0.00 0.00 2.83
252 253 1.539827 ACATCGCAGCCAAACCTAAAC 59.460 47.619 0.00 0.00 0.00 2.01
253 254 1.810151 GACATCGCAGCCAAACCTAAA 59.190 47.619 0.00 0.00 0.00 1.85
254 255 1.003118 AGACATCGCAGCCAAACCTAA 59.997 47.619 0.00 0.00 0.00 2.69
255 256 0.613260 AGACATCGCAGCCAAACCTA 59.387 50.000 0.00 0.00 0.00 3.08
256 257 0.957395 CAGACATCGCAGCCAAACCT 60.957 55.000 0.00 0.00 0.00 3.50
257 258 1.237285 ACAGACATCGCAGCCAAACC 61.237 55.000 0.00 0.00 0.00 3.27
258 259 0.593128 AACAGACATCGCAGCCAAAC 59.407 50.000 0.00 0.00 0.00 2.93
259 260 1.001487 CAAACAGACATCGCAGCCAAA 60.001 47.619 0.00 0.00 0.00 3.28
260 261 0.592637 CAAACAGACATCGCAGCCAA 59.407 50.000 0.00 0.00 0.00 4.52
261 262 1.236616 CCAAACAGACATCGCAGCCA 61.237 55.000 0.00 0.00 0.00 4.75
262 263 1.237285 ACCAAACAGACATCGCAGCC 61.237 55.000 0.00 0.00 0.00 4.85
263 264 1.438651 TACCAAACAGACATCGCAGC 58.561 50.000 0.00 0.00 0.00 5.25
264 265 4.271049 CCTAATACCAAACAGACATCGCAG 59.729 45.833 0.00 0.00 0.00 5.18
265 266 4.188462 CCTAATACCAAACAGACATCGCA 58.812 43.478 0.00 0.00 0.00 5.10
266 267 3.002348 GCCTAATACCAAACAGACATCGC 59.998 47.826 0.00 0.00 0.00 4.58
267 268 3.560068 GGCCTAATACCAAACAGACATCG 59.440 47.826 0.00 0.00 0.00 3.84
268 269 3.883489 GGGCCTAATACCAAACAGACATC 59.117 47.826 0.84 0.00 0.00 3.06
269 270 3.268334 TGGGCCTAATACCAAACAGACAT 59.732 43.478 4.53 0.00 32.89 3.06
270 271 2.645297 TGGGCCTAATACCAAACAGACA 59.355 45.455 4.53 0.00 32.89 3.41
271 272 3.054655 TCTGGGCCTAATACCAAACAGAC 60.055 47.826 4.53 0.00 36.09 3.51
272 273 3.054655 GTCTGGGCCTAATACCAAACAGA 60.055 47.826 4.53 0.00 36.09 3.41
273 274 3.054361 AGTCTGGGCCTAATACCAAACAG 60.054 47.826 4.53 0.00 36.09 3.16
274 275 2.916934 AGTCTGGGCCTAATACCAAACA 59.083 45.455 4.53 0.00 36.09 2.83
275 276 3.646736 AGTCTGGGCCTAATACCAAAC 57.353 47.619 4.53 0.00 36.09 2.93
276 277 5.071788 CAGATAGTCTGGGCCTAATACCAAA 59.928 44.000 4.53 0.00 40.71 3.28
277 278 4.593206 CAGATAGTCTGGGCCTAATACCAA 59.407 45.833 4.53 0.00 40.71 3.67
278 279 4.160329 CAGATAGTCTGGGCCTAATACCA 58.840 47.826 4.53 0.00 40.71 3.25
279 280 3.055747 GCAGATAGTCTGGGCCTAATACC 60.056 52.174 4.53 0.00 44.43 2.73
280 281 4.195225 GCAGATAGTCTGGGCCTAATAC 57.805 50.000 4.53 0.00 44.43 1.89
292 293 7.095857 CCAATTGATAAAGAGACGCAGATAGTC 60.096 40.741 7.12 0.00 38.81 2.59
293 294 6.703607 CCAATTGATAAAGAGACGCAGATAGT 59.296 38.462 7.12 0.00 0.00 2.12
294 295 6.925718 TCCAATTGATAAAGAGACGCAGATAG 59.074 38.462 7.12 0.00 0.00 2.08
295 296 6.816136 TCCAATTGATAAAGAGACGCAGATA 58.184 36.000 7.12 0.00 0.00 1.98
296 297 5.674525 TCCAATTGATAAAGAGACGCAGAT 58.325 37.500 7.12 0.00 0.00 2.90
297 298 5.084818 TCCAATTGATAAAGAGACGCAGA 57.915 39.130 7.12 0.00 0.00 4.26
298 299 5.998454 ATCCAATTGATAAAGAGACGCAG 57.002 39.130 7.12 0.00 0.00 5.18
299 300 5.991606 CCTATCCAATTGATAAAGAGACGCA 59.008 40.000 7.12 0.00 35.53 5.24
300 301 5.992217 ACCTATCCAATTGATAAAGAGACGC 59.008 40.000 7.12 0.00 35.53 5.19
301 302 6.986817 ACACCTATCCAATTGATAAAGAGACG 59.013 38.462 7.12 0.00 35.53 4.18
302 303 9.482627 CTACACCTATCCAATTGATAAAGAGAC 57.517 37.037 7.12 0.00 35.53 3.36
303 304 8.150945 GCTACACCTATCCAATTGATAAAGAGA 58.849 37.037 7.12 0.00 35.53 3.10
304 305 7.116948 CGCTACACCTATCCAATTGATAAAGAG 59.883 40.741 7.12 0.00 35.53 2.85
305 306 6.929049 CGCTACACCTATCCAATTGATAAAGA 59.071 38.462 7.12 0.00 35.53 2.52
306 307 6.147821 CCGCTACACCTATCCAATTGATAAAG 59.852 42.308 7.12 0.00 35.53 1.85
307 308 5.995282 CCGCTACACCTATCCAATTGATAAA 59.005 40.000 7.12 0.00 35.53 1.40
308 309 5.547465 CCGCTACACCTATCCAATTGATAA 58.453 41.667 7.12 0.00 35.53 1.75
309 310 4.562757 GCCGCTACACCTATCCAATTGATA 60.563 45.833 7.12 2.58 34.76 2.15
310 311 3.807209 GCCGCTACACCTATCCAATTGAT 60.807 47.826 7.12 1.44 37.49 2.57
311 312 2.484770 GCCGCTACACCTATCCAATTGA 60.485 50.000 7.12 0.00 0.00 2.57
312 313 1.873591 GCCGCTACACCTATCCAATTG 59.126 52.381 0.00 0.00 0.00 2.32
313 314 1.488812 TGCCGCTACACCTATCCAATT 59.511 47.619 0.00 0.00 0.00 2.32
314 315 1.070758 CTGCCGCTACACCTATCCAAT 59.929 52.381 0.00 0.00 0.00 3.16
315 316 0.464036 CTGCCGCTACACCTATCCAA 59.536 55.000 0.00 0.00 0.00 3.53
316 317 0.686441 ACTGCCGCTACACCTATCCA 60.686 55.000 0.00 0.00 0.00 3.41
317 318 0.464452 AACTGCCGCTACACCTATCC 59.536 55.000 0.00 0.00 0.00 2.59
318 319 1.134788 ACAACTGCCGCTACACCTATC 60.135 52.381 0.00 0.00 0.00 2.08
319 320 0.902531 ACAACTGCCGCTACACCTAT 59.097 50.000 0.00 0.00 0.00 2.57
320 321 0.682852 AACAACTGCCGCTACACCTA 59.317 50.000 0.00 0.00 0.00 3.08
321 322 0.884704 CAACAACTGCCGCTACACCT 60.885 55.000 0.00 0.00 0.00 4.00
322 323 1.574428 CAACAACTGCCGCTACACC 59.426 57.895 0.00 0.00 0.00 4.16
323 324 1.082104 GCAACAACTGCCGCTACAC 60.082 57.895 0.00 0.00 46.13 2.90
324 325 3.339731 GCAACAACTGCCGCTACA 58.660 55.556 0.00 0.00 46.13 2.74
332 333 2.210116 ACACCGTCTAAGCAACAACTG 58.790 47.619 0.00 0.00 0.00 3.16
333 334 2.102588 AGACACCGTCTAAGCAACAACT 59.897 45.455 0.00 0.00 41.51 3.16
334 335 2.480845 AGACACCGTCTAAGCAACAAC 58.519 47.619 0.00 0.00 41.51 3.32
335 336 2.902705 AGACACCGTCTAAGCAACAA 57.097 45.000 0.00 0.00 41.51 2.83
336 337 2.902705 AAGACACCGTCTAAGCAACA 57.097 45.000 0.00 0.00 42.59 3.33
337 338 4.304939 ACTAAAGACACCGTCTAAGCAAC 58.695 43.478 0.00 0.00 42.59 4.17
338 339 4.280174 AGACTAAAGACACCGTCTAAGCAA 59.720 41.667 0.00 0.00 42.59 3.91
339 340 3.825014 AGACTAAAGACACCGTCTAAGCA 59.175 43.478 0.00 0.00 42.59 3.91
340 341 4.437772 AGACTAAAGACACCGTCTAAGC 57.562 45.455 0.00 0.00 42.59 3.09
341 342 4.621886 GCAAGACTAAAGACACCGTCTAAG 59.378 45.833 0.00 1.61 42.59 2.18
342 343 4.280174 AGCAAGACTAAAGACACCGTCTAA 59.720 41.667 0.00 0.00 42.59 2.10
343 344 3.825014 AGCAAGACTAAAGACACCGTCTA 59.175 43.478 0.00 0.00 42.59 2.59
344 345 2.628657 AGCAAGACTAAAGACACCGTCT 59.371 45.455 0.00 0.00 45.64 4.18
345 346 2.731976 CAGCAAGACTAAAGACACCGTC 59.268 50.000 0.00 0.00 0.00 4.79
346 347 2.102588 ACAGCAAGACTAAAGACACCGT 59.897 45.455 0.00 0.00 0.00 4.83
347 348 2.755650 ACAGCAAGACTAAAGACACCG 58.244 47.619 0.00 0.00 0.00 4.94
348 349 3.877508 ACAACAGCAAGACTAAAGACACC 59.122 43.478 0.00 0.00 0.00 4.16
349 350 6.347725 CCATACAACAGCAAGACTAAAGACAC 60.348 42.308 0.00 0.00 0.00 3.67
350 351 5.700832 CCATACAACAGCAAGACTAAAGACA 59.299 40.000 0.00 0.00 0.00 3.41
351 352 5.390991 GCCATACAACAGCAAGACTAAAGAC 60.391 44.000 0.00 0.00 0.00 3.01
352 353 4.695455 GCCATACAACAGCAAGACTAAAGA 59.305 41.667 0.00 0.00 0.00 2.52
353 354 4.697352 AGCCATACAACAGCAAGACTAAAG 59.303 41.667 0.00 0.00 0.00 1.85
354 355 4.651778 AGCCATACAACAGCAAGACTAAA 58.348 39.130 0.00 0.00 0.00 1.85
355 356 4.286297 AGCCATACAACAGCAAGACTAA 57.714 40.909 0.00 0.00 0.00 2.24
356 357 3.981071 AGCCATACAACAGCAAGACTA 57.019 42.857 0.00 0.00 0.00 2.59
357 358 2.867109 AGCCATACAACAGCAAGACT 57.133 45.000 0.00 0.00 0.00 3.24
358 359 3.923017 AAAGCCATACAACAGCAAGAC 57.077 42.857 0.00 0.00 0.00 3.01
359 360 6.318648 CCTTATAAAGCCATACAACAGCAAGA 59.681 38.462 0.00 0.00 0.00 3.02
360 361 6.095440 ACCTTATAAAGCCATACAACAGCAAG 59.905 38.462 0.00 0.00 0.00 4.01
361 362 5.949354 ACCTTATAAAGCCATACAACAGCAA 59.051 36.000 0.00 0.00 0.00 3.91
362 363 5.505780 ACCTTATAAAGCCATACAACAGCA 58.494 37.500 0.00 0.00 0.00 4.41
363 364 5.823045 AGACCTTATAAAGCCATACAACAGC 59.177 40.000 0.00 0.00 0.00 4.40
364 365 7.865706 AAGACCTTATAAAGCCATACAACAG 57.134 36.000 0.00 0.00 0.00 3.16
365 366 8.519526 CAAAAGACCTTATAAAGCCATACAACA 58.480 33.333 0.00 0.00 0.00 3.33
366 367 8.736244 TCAAAAGACCTTATAAAGCCATACAAC 58.264 33.333 0.00 0.00 0.00 3.32
367 368 8.871629 TCAAAAGACCTTATAAAGCCATACAA 57.128 30.769 0.00 0.00 0.00 2.41
368 369 8.325787 TCTCAAAAGACCTTATAAAGCCATACA 58.674 33.333 0.00 0.00 0.00 2.29
369 370 8.732746 TCTCAAAAGACCTTATAAAGCCATAC 57.267 34.615 0.00 0.00 0.00 2.39
370 371 9.920946 ATTCTCAAAAGACCTTATAAAGCCATA 57.079 29.630 0.00 0.00 0.00 2.74
371 372 8.829373 ATTCTCAAAAGACCTTATAAAGCCAT 57.171 30.769 0.00 0.00 0.00 4.40
372 373 9.747898 TTATTCTCAAAAGACCTTATAAAGCCA 57.252 29.630 0.00 0.00 0.00 4.75
396 397 8.705134 CGATGCATACGACCACTTTATTAATTA 58.295 33.333 0.00 0.00 0.00 1.40
397 398 7.572759 CGATGCATACGACCACTTTATTAATT 58.427 34.615 0.00 0.00 0.00 1.40
398 399 6.347402 GCGATGCATACGACCACTTTATTAAT 60.347 38.462 18.54 0.00 0.00 1.40
399 400 5.050634 GCGATGCATACGACCACTTTATTAA 60.051 40.000 18.54 0.00 0.00 1.40
400 401 4.446385 GCGATGCATACGACCACTTTATTA 59.554 41.667 18.54 0.00 0.00 0.98
401 402 3.247648 GCGATGCATACGACCACTTTATT 59.752 43.478 18.54 0.00 0.00 1.40
402 403 2.800544 GCGATGCATACGACCACTTTAT 59.199 45.455 18.54 0.00 0.00 1.40
403 404 2.198406 GCGATGCATACGACCACTTTA 58.802 47.619 18.54 0.00 0.00 1.85
404 405 1.006832 GCGATGCATACGACCACTTT 58.993 50.000 18.54 0.00 0.00 2.66
405 406 0.810031 GGCGATGCATACGACCACTT 60.810 55.000 18.54 0.00 32.13 3.16
406 407 1.227263 GGCGATGCATACGACCACT 60.227 57.895 18.54 0.00 32.13 4.00
407 408 3.319904 GGCGATGCATACGACCAC 58.680 61.111 18.54 4.72 32.13 4.16
410 411 0.319900 ATCTGGGCGATGCATACGAC 60.320 55.000 18.54 16.25 38.12 4.34
411 412 0.319813 CATCTGGGCGATGCATACGA 60.320 55.000 18.54 2.30 42.75 3.43
412 413 2.156542 CATCTGGGCGATGCATACG 58.843 57.895 0.00 6.68 42.75 3.06
419 420 1.449353 GCCTCTTCATCTGGGCGAT 59.551 57.895 0.00 0.00 35.08 4.58
420 421 2.735772 GGCCTCTTCATCTGGGCGA 61.736 63.158 0.00 0.00 44.91 5.54
421 422 2.203126 GGCCTCTTCATCTGGGCG 60.203 66.667 0.00 0.00 44.91 6.13
422 423 2.203126 CGGCCTCTTCATCTGGGC 60.203 66.667 0.00 0.00 43.42 5.36
423 424 2.507944 CCGGCCTCTTCATCTGGG 59.492 66.667 0.00 0.00 0.00 4.45
424 425 2.507944 CCCGGCCTCTTCATCTGG 59.492 66.667 0.00 0.00 0.00 3.86
425 426 2.317149 GACCCCGGCCTCTTCATCTG 62.317 65.000 0.00 0.00 0.00 2.90
426 427 2.041265 ACCCCGGCCTCTTCATCT 59.959 61.111 0.00 0.00 0.00 2.90
427 428 1.700042 ATGACCCCGGCCTCTTCATC 61.700 60.000 0.00 0.00 0.00 2.92
428 429 1.694169 ATGACCCCGGCCTCTTCAT 60.694 57.895 0.00 0.37 0.00 2.57
429 430 2.285368 ATGACCCCGGCCTCTTCA 60.285 61.111 0.00 0.00 0.00 3.02
430 431 2.506472 GATGACCCCGGCCTCTTC 59.494 66.667 0.00 0.00 0.00 2.87
431 432 3.090532 GGATGACCCCGGCCTCTT 61.091 66.667 0.00 0.00 0.00 2.85
432 433 3.642741 AAGGATGACCCCGGCCTCT 62.643 63.158 0.00 0.00 36.73 3.69
433 434 3.090532 AAGGATGACCCCGGCCTC 61.091 66.667 0.00 0.00 36.73 4.70
434 435 3.090532 GAAGGATGACCCCGGCCT 61.091 66.667 0.00 0.00 36.73 5.19
435 436 2.211468 AAAGAAGGATGACCCCGGCC 62.211 60.000 0.00 0.00 36.73 6.13
436 437 0.323451 AAAAGAAGGATGACCCCGGC 60.323 55.000 0.00 0.00 36.73 6.13
437 438 2.215942 AAAAAGAAGGATGACCCCGG 57.784 50.000 0.00 0.00 36.73 5.73
455 456 9.176181 GACATCGACATAGTTGCTTTTTAAAAA 57.824 29.630 12.62 12.62 0.00 1.94
456 457 7.806014 GGACATCGACATAGTTGCTTTTTAAAA 59.194 33.333 0.00 0.00 0.00 1.52
457 458 7.302524 GGACATCGACATAGTTGCTTTTTAAA 58.697 34.615 0.00 0.00 0.00 1.52
458 459 6.401688 CGGACATCGACATAGTTGCTTTTTAA 60.402 38.462 0.00 0.00 42.43 1.52
459 460 5.062934 CGGACATCGACATAGTTGCTTTTTA 59.937 40.000 0.00 0.00 42.43 1.52
460 461 4.142902 CGGACATCGACATAGTTGCTTTTT 60.143 41.667 0.00 0.00 42.43 1.94
461 462 3.370978 CGGACATCGACATAGTTGCTTTT 59.629 43.478 0.00 0.00 42.43 2.27
462 463 2.930040 CGGACATCGACATAGTTGCTTT 59.070 45.455 0.00 0.00 42.43 3.51
463 464 2.165641 TCGGACATCGACATAGTTGCTT 59.834 45.455 0.00 0.00 43.74 3.91
464 465 1.749063 TCGGACATCGACATAGTTGCT 59.251 47.619 0.00 0.00 43.74 3.91
465 466 2.203800 TCGGACATCGACATAGTTGC 57.796 50.000 0.00 0.00 43.74 4.17
475 476 4.536364 AAACATAGCAATTCGGACATCG 57.464 40.909 0.00 0.00 40.90 3.84
476 477 7.915397 ACATAAAAACATAGCAATTCGGACATC 59.085 33.333 0.00 0.00 0.00 3.06
477 478 7.771183 ACATAAAAACATAGCAATTCGGACAT 58.229 30.769 0.00 0.00 0.00 3.06
478 479 7.151999 ACATAAAAACATAGCAATTCGGACA 57.848 32.000 0.00 0.00 0.00 4.02
479 480 9.730420 ATAACATAAAAACATAGCAATTCGGAC 57.270 29.630 0.00 0.00 0.00 4.79
480 481 9.944663 GATAACATAAAAACATAGCAATTCGGA 57.055 29.630 0.00 0.00 0.00 4.55
481 482 9.180678 GGATAACATAAAAACATAGCAATTCGG 57.819 33.333 0.00 0.00 0.00 4.30
482 483 9.180678 GGGATAACATAAAAACATAGCAATTCG 57.819 33.333 0.00 0.00 0.00 3.34
483 484 9.180678 CGGGATAACATAAAAACATAGCAATTC 57.819 33.333 0.00 0.00 0.00 2.17
484 485 8.691797 ACGGGATAACATAAAAACATAGCAATT 58.308 29.630 0.00 0.00 0.00 2.32
485 486 8.232913 ACGGGATAACATAAAAACATAGCAAT 57.767 30.769 0.00 0.00 0.00 3.56
486 487 7.633193 ACGGGATAACATAAAAACATAGCAA 57.367 32.000 0.00 0.00 0.00 3.91
487 488 8.779303 CATACGGGATAACATAAAAACATAGCA 58.221 33.333 0.00 0.00 0.00 3.49
488 489 8.995220 TCATACGGGATAACATAAAAACATAGC 58.005 33.333 0.00 0.00 0.00 2.97
491 492 9.793259 AGATCATACGGGATAACATAAAAACAT 57.207 29.630 0.00 0.00 0.00 2.71
513 514 9.539825 CCCTATTTCATGCATAGTATGTAGATC 57.460 37.037 11.73 0.00 0.00 2.75
514 515 9.051259 ACCCTATTTCATGCATAGTATGTAGAT 57.949 33.333 11.73 3.96 0.00 1.98
515 516 8.435931 ACCCTATTTCATGCATAGTATGTAGA 57.564 34.615 11.73 4.92 0.00 2.59
516 517 9.155975 GAACCCTATTTCATGCATAGTATGTAG 57.844 37.037 11.73 3.90 0.00 2.74
517 518 8.100791 GGAACCCTATTTCATGCATAGTATGTA 58.899 37.037 11.73 7.69 0.00 2.29
518 519 6.942576 GGAACCCTATTTCATGCATAGTATGT 59.057 38.462 11.73 0.00 0.00 2.29
519 520 6.092670 CGGAACCCTATTTCATGCATAGTATG 59.907 42.308 0.00 5.73 0.00 2.39
520 521 6.013725 TCGGAACCCTATTTCATGCATAGTAT 60.014 38.462 0.00 0.00 0.00 2.12
521 522 5.305902 TCGGAACCCTATTTCATGCATAGTA 59.694 40.000 0.00 0.00 0.00 1.82
522 523 4.102524 TCGGAACCCTATTTCATGCATAGT 59.897 41.667 0.00 0.00 0.00 2.12
523 524 4.452455 GTCGGAACCCTATTTCATGCATAG 59.548 45.833 0.00 0.00 0.00 2.23
524 525 4.102524 AGTCGGAACCCTATTTCATGCATA 59.897 41.667 0.00 0.00 0.00 3.14
525 526 3.117888 AGTCGGAACCCTATTTCATGCAT 60.118 43.478 0.00 0.00 0.00 3.96
526 527 2.238646 AGTCGGAACCCTATTTCATGCA 59.761 45.455 0.00 0.00 0.00 3.96
527 528 2.919228 AGTCGGAACCCTATTTCATGC 58.081 47.619 0.00 0.00 0.00 4.06
528 529 6.038271 CCTTAAAGTCGGAACCCTATTTCATG 59.962 42.308 0.00 0.00 0.00 3.07
529 530 6.120220 CCTTAAAGTCGGAACCCTATTTCAT 58.880 40.000 0.00 0.00 0.00 2.57
530 531 5.013391 ACCTTAAAGTCGGAACCCTATTTCA 59.987 40.000 0.00 0.00 0.00 2.69
531 532 5.494724 ACCTTAAAGTCGGAACCCTATTTC 58.505 41.667 0.00 0.00 0.00 2.17
532 533 5.509832 ACCTTAAAGTCGGAACCCTATTT 57.490 39.130 0.00 0.00 0.00 1.40
533 534 5.509832 AACCTTAAAGTCGGAACCCTATT 57.490 39.130 0.00 0.00 0.00 1.73
534 535 5.221986 ACAAACCTTAAAGTCGGAACCCTAT 60.222 40.000 0.00 0.00 0.00 2.57
535 536 4.102996 ACAAACCTTAAAGTCGGAACCCTA 59.897 41.667 0.00 0.00 0.00 3.53
536 537 3.117776 ACAAACCTTAAAGTCGGAACCCT 60.118 43.478 0.00 0.00 0.00 4.34
537 538 3.004002 CACAAACCTTAAAGTCGGAACCC 59.996 47.826 0.00 0.00 0.00 4.11
538 539 3.549423 GCACAAACCTTAAAGTCGGAACC 60.549 47.826 0.00 0.00 0.00 3.62
539 540 3.314357 AGCACAAACCTTAAAGTCGGAAC 59.686 43.478 0.00 0.00 0.00 3.62
540 541 3.547746 AGCACAAACCTTAAAGTCGGAA 58.452 40.909 0.00 0.00 0.00 4.30
541 542 3.202829 AGCACAAACCTTAAAGTCGGA 57.797 42.857 0.00 0.00 0.00 4.55
542 543 3.304458 GGAAGCACAAACCTTAAAGTCGG 60.304 47.826 0.00 0.00 0.00 4.79
543 544 3.606153 CGGAAGCACAAACCTTAAAGTCG 60.606 47.826 0.00 0.00 0.00 4.18
544 545 3.304458 CCGGAAGCACAAACCTTAAAGTC 60.304 47.826 0.00 0.00 0.00 3.01
545 546 2.621526 CCGGAAGCACAAACCTTAAAGT 59.378 45.455 0.00 0.00 0.00 2.66
546 547 2.882137 TCCGGAAGCACAAACCTTAAAG 59.118 45.455 0.00 0.00 0.00 1.85
547 548 2.882137 CTCCGGAAGCACAAACCTTAAA 59.118 45.455 5.23 0.00 0.00 1.52
548 549 2.500229 CTCCGGAAGCACAAACCTTAA 58.500 47.619 5.23 0.00 0.00 1.85
549 550 1.271163 CCTCCGGAAGCACAAACCTTA 60.271 52.381 5.23 0.00 0.00 2.69
550 551 0.537371 CCTCCGGAAGCACAAACCTT 60.537 55.000 5.23 0.00 0.00 3.50
551 552 1.073199 CCTCCGGAAGCACAAACCT 59.927 57.895 5.23 0.00 0.00 3.50
552 553 1.971695 CCCTCCGGAAGCACAAACC 60.972 63.158 5.23 0.00 0.00 3.27
553 554 0.955919 CTCCCTCCGGAAGCACAAAC 60.956 60.000 5.23 0.00 37.86 2.93
554 555 1.374947 CTCCCTCCGGAAGCACAAA 59.625 57.895 5.23 0.00 37.86 2.83
555 556 3.068881 CTCCCTCCGGAAGCACAA 58.931 61.111 5.23 0.00 37.86 3.33
556 557 3.706373 GCTCCCTCCGGAAGCACA 61.706 66.667 19.52 0.00 37.86 4.57
557 558 2.748058 TTTGCTCCCTCCGGAAGCAC 62.748 60.000 25.32 6.52 40.08 4.40
558 559 2.063015 TTTTGCTCCCTCCGGAAGCA 62.063 55.000 22.48 22.48 39.23 3.91
559 560 0.681243 ATTTTGCTCCCTCCGGAAGC 60.681 55.000 17.97 17.97 37.86 3.86
560 561 1.098050 CATTTTGCTCCCTCCGGAAG 58.902 55.000 5.23 0.00 37.86 3.46
561 562 0.323360 CCATTTTGCTCCCTCCGGAA 60.323 55.000 5.23 0.00 37.86 4.30
562 563 1.302949 CCATTTTGCTCCCTCCGGA 59.697 57.895 2.93 2.93 36.45 5.14
563 564 2.418083 GCCATTTTGCTCCCTCCGG 61.418 63.158 0.00 0.00 0.00 5.14
564 565 0.967380 AAGCCATTTTGCTCCCTCCG 60.967 55.000 0.00 0.00 41.80 4.63
565 566 2.143876 TAAGCCATTTTGCTCCCTCC 57.856 50.000 0.00 0.00 41.80 4.30
566 567 3.026694 ACATAAGCCATTTTGCTCCCTC 58.973 45.455 0.00 0.00 41.80 4.30
567 568 3.026694 GACATAAGCCATTTTGCTCCCT 58.973 45.455 0.00 0.00 41.80 4.20
568 569 2.101415 GGACATAAGCCATTTTGCTCCC 59.899 50.000 0.00 0.00 41.80 4.30
569 570 2.760092 TGGACATAAGCCATTTTGCTCC 59.240 45.455 0.00 0.00 41.80 4.70
570 571 3.736126 GCTGGACATAAGCCATTTTGCTC 60.736 47.826 0.00 0.00 41.80 4.26
571 572 2.167075 GCTGGACATAAGCCATTTTGCT 59.833 45.455 0.00 0.00 45.43 3.91
572 573 2.543641 GCTGGACATAAGCCATTTTGC 58.456 47.619 0.00 0.00 34.33 3.68
573 574 2.480073 CCGCTGGACATAAGCCATTTTG 60.480 50.000 0.00 0.00 37.37 2.44
574 575 1.750778 CCGCTGGACATAAGCCATTTT 59.249 47.619 0.00 0.00 37.37 1.82
575 576 1.064758 TCCGCTGGACATAAGCCATTT 60.065 47.619 0.00 0.00 37.37 2.32
576 577 0.546122 TCCGCTGGACATAAGCCATT 59.454 50.000 0.00 0.00 37.37 3.16
577 578 2.220953 TCCGCTGGACATAAGCCAT 58.779 52.632 0.00 0.00 37.37 4.40
578 579 3.720494 TCCGCTGGACATAAGCCA 58.280 55.556 0.00 0.00 37.37 4.75
593 594 4.754667 GGAAGTCCGGGCACGTCC 62.755 72.222 9.71 10.85 37.70 4.79
594 595 3.524648 TTGGAAGTCCGGGCACGTC 62.525 63.158 9.71 4.58 39.43 4.34
595 596 3.530910 CTTGGAAGTCCGGGCACGT 62.531 63.158 9.71 0.00 39.43 4.49
596 597 2.742372 CTTGGAAGTCCGGGCACG 60.742 66.667 9.71 0.00 39.43 5.34
597 598 1.228154 AACTTGGAAGTCCGGGCAC 60.228 57.895 9.71 0.86 38.57 5.01
598 599 1.072505 GAACTTGGAAGTCCGGGCA 59.927 57.895 9.71 0.00 38.57 5.36
599 600 1.674651 GGAACTTGGAAGTCCGGGC 60.675 63.158 0.00 0.00 38.57 6.13
600 601 0.109723 TTGGAACTTGGAAGTCCGGG 59.890 55.000 0.00 0.00 38.57 5.73
601 602 1.235724 GTTGGAACTTGGAAGTCCGG 58.764 55.000 0.00 0.00 38.57 5.14
602 603 1.235724 GGTTGGAACTTGGAAGTCCG 58.764 55.000 0.00 0.00 38.57 4.79
603 604 1.617322 GGGTTGGAACTTGGAAGTCC 58.383 55.000 0.00 0.00 38.57 3.85
604 605 1.617322 GGGGTTGGAACTTGGAAGTC 58.383 55.000 0.00 0.00 38.57 3.01
605 606 0.187606 GGGGGTTGGAACTTGGAAGT 59.812 55.000 0.00 0.00 42.04 3.01
606 607 0.482887 AGGGGGTTGGAACTTGGAAG 59.517 55.000 0.00 0.00 0.00 3.46
607 608 0.481128 GAGGGGGTTGGAACTTGGAA 59.519 55.000 0.00 0.00 0.00 3.53
608 609 1.432023 GGAGGGGGTTGGAACTTGGA 61.432 60.000 0.00 0.00 0.00 3.53
609 610 1.076727 GGAGGGGGTTGGAACTTGG 59.923 63.158 0.00 0.00 0.00 3.61
610 611 1.076727 GGGAGGGGGTTGGAACTTG 59.923 63.158 0.00 0.00 0.00 3.16
611 612 2.167729 GGGGAGGGGGTTGGAACTT 61.168 63.158 0.00 0.00 0.00 2.66
612 613 2.534533 GGGGAGGGGGTTGGAACT 60.535 66.667 0.00 0.00 0.00 3.01
613 614 3.669230 GGGGGAGGGGGTTGGAAC 61.669 72.222 0.00 0.00 0.00 3.62
629 630 4.436998 GGCGAGAGACCCACACGG 62.437 72.222 0.00 0.00 37.81 4.94
637 638 3.112709 GCGTGTTGGGCGAGAGAC 61.113 66.667 0.00 0.00 39.70 3.36
683 684 1.767127 TTAACACGGCATATGCGCGG 61.767 55.000 29.42 22.90 43.26 6.46
684 685 0.653323 GTTAACACGGCATATGCGCG 60.653 55.000 26.57 26.57 43.26 6.86
685 686 0.655733 AGTTAACACGGCATATGCGC 59.344 50.000 21.04 12.96 43.26 6.09
686 687 2.201732 AGAGTTAACACGGCATATGCG 58.798 47.619 21.04 17.65 43.26 4.73
687 688 3.001330 GTGAGAGTTAACACGGCATATGC 59.999 47.826 19.79 19.79 41.14 3.14
688 689 4.778842 GTGAGAGTTAACACGGCATATG 57.221 45.455 8.61 0.00 0.00 1.78
696 697 4.384846 CCATGTACACGTGAGAGTTAACAC 59.615 45.833 25.01 0.95 36.08 3.32
697 698 4.278919 TCCATGTACACGTGAGAGTTAACA 59.721 41.667 25.01 13.57 36.08 2.41
698 699 4.620184 GTCCATGTACACGTGAGAGTTAAC 59.380 45.833 25.01 8.88 36.08 2.01
699 700 4.521639 AGTCCATGTACACGTGAGAGTTAA 59.478 41.667 25.01 0.00 36.08 2.01
700 701 4.077108 AGTCCATGTACACGTGAGAGTTA 58.923 43.478 25.01 0.00 36.08 2.24
701 702 2.891580 AGTCCATGTACACGTGAGAGTT 59.108 45.455 25.01 0.85 36.08 3.01
702 703 2.515854 AGTCCATGTACACGTGAGAGT 58.484 47.619 25.01 1.30 38.76 3.24
703 704 3.577649 AAGTCCATGTACACGTGAGAG 57.422 47.619 25.01 6.89 34.90 3.20
704 705 5.654603 AATAAGTCCATGTACACGTGAGA 57.345 39.130 25.01 6.70 34.90 3.27
705 706 7.033791 ACTAAATAAGTCCATGTACACGTGAG 58.966 38.462 25.01 4.95 30.33 3.51
706 707 6.927416 ACTAAATAAGTCCATGTACACGTGA 58.073 36.000 25.01 0.00 30.33 4.35
707 708 8.186163 TCTACTAAATAAGTCCATGTACACGTG 58.814 37.037 15.48 15.48 39.80 4.49
708 709 8.284945 TCTACTAAATAAGTCCATGTACACGT 57.715 34.615 0.00 0.00 39.80 4.49
709 710 7.861372 CCTCTACTAAATAAGTCCATGTACACG 59.139 40.741 0.00 0.00 39.80 4.49
710 711 7.652507 GCCTCTACTAAATAAGTCCATGTACAC 59.347 40.741 0.00 0.00 39.80 2.90
711 712 7.343574 TGCCTCTACTAAATAAGTCCATGTACA 59.656 37.037 0.00 0.00 39.80 2.90
731 734 1.271543 TGCTTGTATTGCAGTGCCTCT 60.272 47.619 13.72 0.00 35.31 3.69
768 771 3.478274 CTCCTCCCTGCTCCTGCC 61.478 72.222 0.00 0.00 38.71 4.85
772 775 3.086600 CACCCTCCTCCCTGCTCC 61.087 72.222 0.00 0.00 0.00 4.70
863 867 4.398044 GCGAGATAGAGGGAAGGAGATAAG 59.602 50.000 0.00 0.00 0.00 1.73
899 904 9.829507 AGAGAAGAGATTAATAAGTGACCATTG 57.170 33.333 0.00 0.00 0.00 2.82
968 973 2.695585 AGAGGAGTTTGGAGTTGGACT 58.304 47.619 0.00 0.00 0.00 3.85
1297 1333 1.330655 GGAGTGAATCTGGCGGAGGA 61.331 60.000 1.04 0.00 0.00 3.71
1317 1356 3.654414 GGAAGTGTCATCGTCTTTGAGT 58.346 45.455 0.00 0.00 0.00 3.41
1321 1360 2.296471 ACTCGGAAGTGTCATCGTCTTT 59.704 45.455 0.00 0.00 33.32 2.52
1412 1475 1.477923 GGTTGTACCAAACTCCCTGCA 60.478 52.381 0.00 0.00 38.42 4.41
1498 1564 1.676014 GGAGGAGAATGTGTGGAACCG 60.676 57.143 0.00 0.00 34.36 4.44
1581 1647 1.630244 ATGAGAAGACAGCAACGCGC 61.630 55.000 5.73 0.00 42.91 6.86
2809 3577 7.556275 CCACTGCCATCTAGAACCTTTAAAATA 59.444 37.037 0.00 0.00 0.00 1.40
2872 3640 9.591404 CGATTCTAATCATTTTAGCTAGCTTTG 57.409 33.333 24.88 15.22 35.11 2.77
2881 3649 8.997323 AGATTCTGGCGATTCTAATCATTTTAG 58.003 33.333 3.76 0.00 35.11 1.85
3045 3821 7.424452 CGTAATGCTTTTATAAGGACAAACGAC 59.576 37.037 10.24 0.00 36.98 4.34
3050 3826 8.725405 TGATCGTAATGCTTTTATAAGGACAA 57.275 30.769 0.00 0.00 34.33 3.18
3093 3869 1.344114 ACATTTGCGTTGCCATCCTTT 59.656 42.857 0.00 0.00 0.00 3.11
3446 4233 5.220472 CGAATACTGATGATGGTCACAACAC 60.220 44.000 0.00 0.00 31.87 3.32
3447 4234 4.869861 CGAATACTGATGATGGTCACAACA 59.130 41.667 0.00 0.00 33.71 3.33
3577 4366 7.336931 ACACGCCTTAATATGATCTTCAAACTT 59.663 33.333 0.00 0.00 0.00 2.66
3634 4427 7.939784 ATGGAAAATCTAAGGAAGTTACCAC 57.060 36.000 0.00 0.00 0.00 4.16
3657 4450 3.056107 ACAGTACAAGCATCACGGTGTAT 60.056 43.478 8.17 0.00 0.00 2.29
3676 4469 3.416277 CAACGCGGTTATGATTTCACAG 58.584 45.455 12.47 0.00 0.00 3.66
3754 4553 0.036010 ACCCTGCCGATCTTTGTCAG 60.036 55.000 0.00 0.00 0.00 3.51
3899 4701 3.184683 CTGCTCGTTCGGCTCAGC 61.185 66.667 0.00 0.00 0.00 4.26
4408 5241 5.163519 ACACACAGGAAAAATCCAGTTTCTG 60.164 40.000 0.00 0.00 35.68 3.02
4409 5242 4.956075 ACACACAGGAAAAATCCAGTTTCT 59.044 37.500 0.00 0.00 35.68 2.52
4410 5243 5.262588 ACACACAGGAAAAATCCAGTTTC 57.737 39.130 0.00 0.00 34.79 2.78
4411 5244 5.675684 AACACACAGGAAAAATCCAGTTT 57.324 34.783 0.00 0.00 0.00 2.66
4412 5245 6.976934 ATAACACACAGGAAAAATCCAGTT 57.023 33.333 0.00 0.00 0.00 3.16
4413 5246 6.433093 GGTATAACACACAGGAAAAATCCAGT 59.567 38.462 0.00 0.00 0.00 4.00
4414 5247 6.659242 AGGTATAACACACAGGAAAAATCCAG 59.341 38.462 0.00 0.00 0.00 3.86
4415 5248 6.548321 AGGTATAACACACAGGAAAAATCCA 58.452 36.000 0.00 0.00 0.00 3.41
4416 5249 7.462571 AAGGTATAACACACAGGAAAAATCC 57.537 36.000 0.00 0.00 0.00 3.01
4417 5250 9.406828 GAAAAGGTATAACACACAGGAAAAATC 57.593 33.333 0.00 0.00 0.00 2.17
4418 5251 8.364894 GGAAAAGGTATAACACACAGGAAAAAT 58.635 33.333 0.00 0.00 0.00 1.82
4419 5252 7.562088 AGGAAAAGGTATAACACACAGGAAAAA 59.438 33.333 0.00 0.00 0.00 1.94
4420 5253 7.013846 CAGGAAAAGGTATAACACACAGGAAAA 59.986 37.037 0.00 0.00 0.00 2.29
4421 5254 6.488683 CAGGAAAAGGTATAACACACAGGAAA 59.511 38.462 0.00 0.00 0.00 3.13
4422 5255 6.001460 CAGGAAAAGGTATAACACACAGGAA 58.999 40.000 0.00 0.00 0.00 3.36
4423 5256 5.072600 ACAGGAAAAGGTATAACACACAGGA 59.927 40.000 0.00 0.00 0.00 3.86
4424 5257 5.313712 ACAGGAAAAGGTATAACACACAGG 58.686 41.667 0.00 0.00 0.00 4.00
4425 5258 5.120208 CGACAGGAAAAGGTATAACACACAG 59.880 44.000 0.00 0.00 0.00 3.66
4426 5259 4.992319 CGACAGGAAAAGGTATAACACACA 59.008 41.667 0.00 0.00 0.00 3.72
4427 5260 4.390909 CCGACAGGAAAAGGTATAACACAC 59.609 45.833 0.00 0.00 41.02 3.82
4428 5261 4.563993 CCCGACAGGAAAAGGTATAACACA 60.564 45.833 0.00 0.00 41.02 3.72
4429 5262 3.937079 CCCGACAGGAAAAGGTATAACAC 59.063 47.826 0.00 0.00 41.02 3.32
4430 5263 3.583966 ACCCGACAGGAAAAGGTATAACA 59.416 43.478 0.00 0.00 41.02 2.41
4431 5264 3.937079 CACCCGACAGGAAAAGGTATAAC 59.063 47.826 0.00 0.00 41.02 1.89
4432 5265 3.839490 TCACCCGACAGGAAAAGGTATAA 59.161 43.478 0.00 0.00 41.02 0.98
4433 5266 3.443052 TCACCCGACAGGAAAAGGTATA 58.557 45.455 0.00 0.00 41.02 1.47
4434 5267 2.262637 TCACCCGACAGGAAAAGGTAT 58.737 47.619 0.00 0.00 41.02 2.73
4435 5268 1.719529 TCACCCGACAGGAAAAGGTA 58.280 50.000 0.00 0.00 41.02 3.08
4436 5269 0.841289 TTCACCCGACAGGAAAAGGT 59.159 50.000 0.00 0.00 41.02 3.50
4437 5270 1.975660 TTTCACCCGACAGGAAAAGG 58.024 50.000 0.00 0.00 41.02 3.11
4438 5271 2.949644 AGTTTTCACCCGACAGGAAAAG 59.050 45.455 0.00 0.00 40.13 2.27
4439 5272 2.946990 GAGTTTTCACCCGACAGGAAAA 59.053 45.455 0.00 0.00 41.02 2.29
4440 5273 2.092861 TGAGTTTTCACCCGACAGGAAA 60.093 45.455 0.00 0.00 41.02 3.13
4441 5274 1.487142 TGAGTTTTCACCCGACAGGAA 59.513 47.619 0.00 0.00 41.02 3.36
4442 5275 1.124780 TGAGTTTTCACCCGACAGGA 58.875 50.000 0.00 0.00 41.02 3.86
4443 5276 1.226746 GTGAGTTTTCACCCGACAGG 58.773 55.000 0.00 0.00 46.47 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.