Multiple sequence alignment - TraesCS2D01G472800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G472800 chr2D 100.000 6441 0 0 1491 7931 576284437 576290877 0.000000e+00 11895.0
1 TraesCS2D01G472800 chr2D 100.000 1093 0 0 1 1093 576282947 576284039 0.000000e+00 2019.0
2 TraesCS2D01G472800 chr2D 88.378 370 31 6 5558 5917 526079027 526078660 1.220000e-117 435.0
3 TraesCS2D01G472800 chr2D 90.966 321 19 4 7097 7413 576406497 576406811 2.650000e-114 424.0
4 TraesCS2D01G472800 chr2D 90.966 321 19 4 7097 7413 576442124 576442438 2.650000e-114 424.0
5 TraesCS2D01G472800 chr2D 90.654 321 20 4 7097 7413 576424408 576424722 1.230000e-112 418.0
6 TraesCS2D01G472800 chr2D 94.949 198 9 1 6915 7112 576402883 576403079 7.730000e-80 309.0
7 TraesCS2D01G472800 chr2D 94.444 198 10 1 6915 7112 576420357 576420553 3.600000e-78 303.0
8 TraesCS2D01G472800 chr2D 93.909 197 11 1 6916 7112 576438210 576438405 6.020000e-76 296.0
9 TraesCS2D01G472800 chr2D 86.800 250 16 3 6671 6919 576296341 576296574 6.100000e-66 263.0
10 TraesCS2D01G472800 chr2D 93.529 170 8 1 3552 3718 637587906 637588075 4.750000e-62 250.0
11 TraesCS2D01G472800 chr2D 91.018 167 11 1 6521 6683 576295772 576295938 1.040000e-53 222.0
12 TraesCS2D01G472800 chr2D 86.207 87 9 2 7848 7931 576408538 576408624 3.050000e-14 91.6
13 TraesCS2D01G472800 chr2D 83.908 87 11 2 7848 7931 576426446 576426532 6.600000e-11 80.5
14 TraesCS2D01G472800 chr2D 96.875 32 1 0 255 286 503453800 503453831 4.000000e-03 54.7
15 TraesCS2D01G472800 chr2A 96.719 3078 71 23 4468 7524 714336358 714339426 0.000000e+00 5097.0
16 TraesCS2D01G472800 chr2A 95.466 2073 69 12 1491 3557 714333537 714335590 0.000000e+00 3284.0
17 TraesCS2D01G472800 chr2A 97.947 682 13 1 3788 4469 714335599 714336279 0.000000e+00 1181.0
18 TraesCS2D01G472800 chr2A 82.295 819 69 40 304 1093 714332510 714333281 2.410000e-179 640.0
19 TraesCS2D01G472800 chr2A 84.926 471 52 11 5528 5990 204630510 204630969 7.250000e-125 459.0
20 TraesCS2D01G472800 chr2A 87.075 294 20 7 5 280 714331850 714332143 4.620000e-82 316.0
21 TraesCS2D01G472800 chr2A 94.578 166 8 1 7600 7764 714340682 714340517 1.020000e-63 255.0
22 TraesCS2D01G472800 chr2A 79.381 97 18 2 6147 6241 15375868 15375964 5.140000e-07 67.6
23 TraesCS2D01G472800 chr2B 91.687 2093 127 26 1492 3570 692465618 692467677 0.000000e+00 2857.0
24 TraesCS2D01G472800 chr2B 93.506 1355 54 20 6239 7563 692469650 692471000 0.000000e+00 1984.0
25 TraesCS2D01G472800 chr2B 92.055 1372 72 22 4078 5420 692468194 692469557 0.000000e+00 1895.0
26 TraesCS2D01G472800 chr2B 87.069 464 23 20 601 1055 692464625 692465060 2.570000e-134 490.0
27 TraesCS2D01G472800 chr2B 85.281 462 44 16 208 662 692464188 692464632 9.380000e-124 455.0
28 TraesCS2D01G472800 chr2B 89.823 226 21 2 1573 1798 334365436 334365659 1.010000e-73 289.0
29 TraesCS2D01G472800 chr2B 91.038 212 19 0 3862 4073 692467817 692468028 3.620000e-73 287.0
30 TraesCS2D01G472800 chr2B 83.764 271 37 3 1495 1765 750890375 750890112 4.750000e-62 250.0
31 TraesCS2D01G472800 chr2B 85.167 209 13 8 1 192 692463852 692464059 1.750000e-46 198.0
32 TraesCS2D01G472800 chr2B 94.175 103 6 0 5442 5544 692469552 692469654 2.960000e-34 158.0
33 TraesCS2D01G472800 chrUn 94.314 1020 37 9 6565 7563 332605331 332606350 0.000000e+00 1543.0
34 TraesCS2D01G472800 chrUn 94.314 1020 37 9 6565 7563 349902997 349904016 0.000000e+00 1543.0
35 TraesCS2D01G472800 chr7D 80.450 711 113 18 5544 6234 296980300 296981004 3.280000e-143 520.0
36 TraesCS2D01G472800 chr7D 93.491 169 8 1 3554 3719 164852926 164852758 1.710000e-61 248.0
37 TraesCS2D01G472800 chr5A 86.947 452 43 10 5545 5989 567821754 567821312 1.990000e-135 494.0
38 TraesCS2D01G472800 chr5A 80.921 152 22 5 5831 5980 552949926 552950072 6.500000e-21 113.0
39 TraesCS2D01G472800 chr7A 85.621 459 47 11 5541 5990 671092325 671092773 1.560000e-126 464.0
40 TraesCS2D01G472800 chr7A 84.071 339 38 12 5614 5951 530938330 530938007 5.980000e-81 313.0
41 TraesCS2D01G472800 chr7A 89.730 185 16 3 3537 3718 643186871 643187055 4.790000e-57 233.0
42 TraesCS2D01G472800 chr3A 85.000 460 48 13 5541 5990 702188511 702188959 1.570000e-121 448.0
43 TraesCS2D01G472800 chr6B 88.251 366 33 6 5558 5914 671932390 671932754 5.690000e-116 429.0
44 TraesCS2D01G472800 chr6B 84.685 111 14 2 6138 6246 44203670 44203561 3.030000e-19 108.0
45 TraesCS2D01G472800 chr5D 87.105 380 33 10 5544 5919 463241054 463241421 4.430000e-112 416.0
46 TraesCS2D01G472800 chr5D 86.822 258 26 6 5739 5989 463241430 463241686 1.690000e-71 281.0
47 TraesCS2D01G472800 chr5D 92.486 173 9 2 3552 3720 5112354 5112182 2.210000e-60 244.0
48 TraesCS2D01G472800 chr5D 83.523 176 23 3 5820 5989 463241729 463241904 8.240000e-35 159.0
49 TraesCS2D01G472800 chr7B 85.978 271 30 5 1495 1765 686266652 686266390 4.690000e-72 283.0
50 TraesCS2D01G472800 chr7B 85.446 213 24 2 1495 1707 392107878 392107673 1.730000e-51 215.0
51 TraesCS2D01G472800 chr7B 80.645 124 19 5 6123 6241 105890239 105890362 3.050000e-14 91.6
52 TraesCS2D01G472800 chr3B 84.871 271 34 2 1495 1765 798916337 798916074 4.720000e-67 267.0
53 TraesCS2D01G472800 chr3B 83.456 272 36 5 1495 1765 98511695 98511432 2.210000e-60 244.0
54 TraesCS2D01G472800 chr3B 80.408 245 33 7 5759 5989 526937196 526936953 1.060000e-38 172.0
55 TraesCS2D01G472800 chr3B 82.803 157 26 1 5379 5534 74537076 74537232 1.070000e-28 139.0
56 TraesCS2D01G472800 chr3B 83.495 103 13 4 6145 6243 103906424 103906526 8.470000e-15 93.5
57 TraesCS2D01G472800 chr3B 90.698 43 1 3 3718 3759 7614120 7614080 4.000000e-03 54.7
58 TraesCS2D01G472800 chr4A 95.152 165 5 2 3556 3717 92731988 92731824 2.840000e-64 257.0
59 TraesCS2D01G472800 chr4A 89.655 58 5 1 6177 6234 389239725 389239781 1.100000e-08 73.1
60 TraesCS2D01G472800 chr1D 92.486 173 9 2 3550 3719 220154303 220154132 2.210000e-60 244.0
61 TraesCS2D01G472800 chr1D 92.941 170 9 1 3551 3717 466603459 466603290 2.210000e-60 244.0
62 TraesCS2D01G472800 chr1D 91.525 177 12 1 3547 3720 39948761 39948937 2.860000e-59 241.0
63 TraesCS2D01G472800 chr5B 90.608 181 11 4 3541 3717 38605751 38605929 1.330000e-57 235.0
64 TraesCS2D01G472800 chr5B 87.209 86 11 0 1495 1580 389400278 389400193 1.820000e-16 99.0
65 TraesCS2D01G472800 chr3D 78.926 242 33 8 5758 5983 313821906 313821667 1.780000e-31 148.0
66 TraesCS2D01G472800 chr3D 83.333 90 11 4 6154 6241 580327763 580327676 6.600000e-11 80.5
67 TraesCS2D01G472800 chr1A 76.829 246 42 7 5757 5989 353664096 353663853 3.010000e-24 124.0
68 TraesCS2D01G472800 chr1A 75.781 128 23 6 6123 6244 293740749 293740874 3.090000e-04 58.4
69 TraesCS2D01G472800 chr4D 81.410 156 19 4 5379 5533 77275074 77275220 1.400000e-22 119.0
70 TraesCS2D01G472800 chr4B 80.769 156 20 4 5379 5533 109400402 109400548 6.500000e-21 113.0
71 TraesCS2D01G472800 chr4B 86.047 86 12 0 1495 1580 434106309 434106224 8.470000e-15 93.5
72 TraesCS2D01G472800 chr4B 86.747 83 11 0 1495 1577 572128674 572128756 8.470000e-15 93.5
73 TraesCS2D01G472800 chr6D 82.883 111 19 0 6130 6240 365784460 365784570 5.060000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G472800 chr2D 576282947 576290877 7930 False 6957.000000 11895 100.000000 1 7931 2 chr2D.!!$F3 7930
1 TraesCS2D01G472800 chr2D 576438210 576442438 4228 False 360.000000 424 92.437500 6916 7413 2 chr2D.!!$F7 497
2 TraesCS2D01G472800 chr2D 576402883 576408624 5741 False 274.866667 424 90.707333 6915 7931 3 chr2D.!!$F5 1016
3 TraesCS2D01G472800 chr2D 576420357 576426532 6175 False 267.166667 418 89.668667 6915 7931 3 chr2D.!!$F6 1016
4 TraesCS2D01G472800 chr2D 576295772 576296574 802 False 242.500000 263 88.909000 6521 6919 2 chr2D.!!$F4 398
5 TraesCS2D01G472800 chr2A 714331850 714339426 7576 False 2103.600000 5097 91.900400 5 7524 5 chr2A.!!$F3 7519
6 TraesCS2D01G472800 chr2B 692463852 692471000 7148 False 1040.500000 2857 89.997250 1 7563 8 chr2B.!!$F2 7562
7 TraesCS2D01G472800 chrUn 332605331 332606350 1019 False 1543.000000 1543 94.314000 6565 7563 1 chrUn.!!$F1 998
8 TraesCS2D01G472800 chrUn 349902997 349904016 1019 False 1543.000000 1543 94.314000 6565 7563 1 chrUn.!!$F2 998
9 TraesCS2D01G472800 chr7D 296980300 296981004 704 False 520.000000 520 80.450000 5544 6234 1 chr7D.!!$F1 690
10 TraesCS2D01G472800 chr5D 463241054 463241904 850 False 285.333333 416 85.816667 5544 5989 3 chr5D.!!$F1 445

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
525 1046 0.246635 AATCTCCGTGGACAAGGACG 59.753 55.000 2.77 1.18 35.20 4.79 F
1864 2606 0.315251 TATGGAGGATCTCTTGCGCG 59.685 55.000 0.00 0.00 33.73 6.86 F
1951 2693 0.037046 TGCAGATCACGTGCTGTCAT 60.037 50.000 19.92 5.81 41.78 3.06 F
2052 2794 0.039617 TTTGGTGCGTGCTATGTTGC 60.040 50.000 0.00 0.00 0.00 4.17 F
3571 4319 0.115745 AAGTACTCCCTCCGTTCCCA 59.884 55.000 0.00 0.00 0.00 4.37 F
3573 4321 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28 F
3574 4322 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32 F
3618 4366 1.669265 CGAGTGACTACATACGGAGCA 59.331 52.381 0.00 0.00 0.00 4.26 F
6062 7561 2.031919 TCGGGCGCTTGTGATGTT 59.968 55.556 7.64 0.00 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1933 2675 0.372679 CATGACAGCACGTGATCTGC 59.627 55.000 22.23 13.67 33.80 4.26 R
3745 4493 0.711184 AGCAGGTACTCCCCTACAGT 59.289 55.000 0.00 0.00 34.60 3.55 R
3750 4498 1.972588 AAATCAGCAGGTACTCCCCT 58.027 50.000 0.00 0.00 34.60 4.79 R
3751 4499 2.290960 ACAAAATCAGCAGGTACTCCCC 60.291 50.000 0.00 0.00 34.60 4.81 R
4586 5620 2.227388 GCACAGGAAGGTTCATGAACAG 59.773 50.000 33.42 19.58 41.15 3.16 R
4660 5698 9.691362 GTTAAAAGGCAAAATGAATAGACTGAA 57.309 29.630 0.00 0.00 0.00 3.02 R
5678 6749 6.494491 ACTTCAAAAATCATCCAACCTCATGA 59.506 34.615 0.00 0.00 33.55 3.07 R
6135 7634 2.039746 CCACCATTCCACCAGTAAGTCA 59.960 50.000 0.00 0.00 0.00 3.41 R
7890 15051 0.033504 TGGTCACCTCGAAGCTGAAC 59.966 55.000 0.00 0.00 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.102084 ACATGGTCCGATCAGATCACAG 59.898 50.000 11.12 0.00 27.24 3.66
108 118 8.916654 CATACTACTAGAATGGTTTGATTAGCG 58.083 37.037 0.00 0.00 0.00 4.26
121 146 0.532862 ATTAGCGCCTGTGGATTCGG 60.533 55.000 2.29 0.00 0.00 4.30
128 153 1.748493 GCCTGTGGATTCGGCAATTAA 59.252 47.619 0.00 0.00 43.25 1.40
140 166 7.201785 GGATTCGGCAATTAATTTGAGGTCTTA 60.202 37.037 0.00 0.00 37.53 2.10
173 199 6.382859 AGTTGTAATCTCCCTTTTGTTTGGTT 59.617 34.615 0.00 0.00 0.00 3.67
192 218 9.626045 GTTTGGTTTCATTTTGGTTCTATCTAG 57.374 33.333 0.00 0.00 0.00 2.43
202 228 7.962964 TTTGGTTCTATCTAGTGTTCTGTTG 57.037 36.000 0.00 0.00 0.00 3.33
206 345 7.178451 TGGTTCTATCTAGTGTTCTGTTGATCA 59.822 37.037 0.00 0.00 0.00 2.92
219 358 8.239314 TGTTCTGTTGATCAAATAATTGCTCTC 58.761 33.333 10.35 0.00 36.45 3.20
222 361 9.322773 TCTGTTGATCAAATAATTGCTCTCTAG 57.677 33.333 10.35 0.00 36.45 2.43
224 363 9.322773 TGTTGATCAAATAATTGCTCTCTAGAG 57.677 33.333 13.98 13.98 44.75 2.43
226 365 9.539825 TTGATCAAATAATTGCTCTCTAGAGAC 57.460 33.333 18.76 15.11 43.67 3.36
280 420 6.186234 TGGTTCTACTTTCTACTACTCCCTC 58.814 44.000 0.00 0.00 0.00 4.30
281 421 5.593909 GGTTCTACTTTCTACTACTCCCTCC 59.406 48.000 0.00 0.00 0.00 4.30
286 426 1.890552 TCTACTACTCCCTCCGTCCT 58.109 55.000 0.00 0.00 0.00 3.85
287 427 1.489649 TCTACTACTCCCTCCGTCCTG 59.510 57.143 0.00 0.00 0.00 3.86
478 999 6.701841 TGATGAATCTAAAGATAAGCACGGTC 59.298 38.462 0.00 0.00 33.73 4.79
479 1000 5.972935 TGAATCTAAAGATAAGCACGGTCA 58.027 37.500 0.00 0.00 33.73 4.02
482 1003 7.552687 TGAATCTAAAGATAAGCACGGTCAATT 59.447 33.333 0.00 0.00 33.73 2.32
483 1004 6.903883 TCTAAAGATAAGCACGGTCAATTC 57.096 37.500 0.00 0.00 0.00 2.17
484 1005 6.640518 TCTAAAGATAAGCACGGTCAATTCT 58.359 36.000 0.00 0.00 0.00 2.40
486 1007 8.255206 TCTAAAGATAAGCACGGTCAATTCTAA 58.745 33.333 0.00 0.00 0.00 2.10
487 1008 7.681939 AAAGATAAGCACGGTCAATTCTAAA 57.318 32.000 0.00 0.00 0.00 1.85
488 1009 7.865706 AAGATAAGCACGGTCAATTCTAAAT 57.134 32.000 0.00 0.00 0.00 1.40
489 1010 7.251704 AGATAAGCACGGTCAATTCTAAATG 57.748 36.000 0.00 0.00 0.00 2.32
493 1014 4.088648 GCACGGTCAATTCTAAATGTTCG 58.911 43.478 0.00 0.00 0.00 3.95
494 1015 4.378046 GCACGGTCAATTCTAAATGTTCGT 60.378 41.667 0.00 0.00 0.00 3.85
495 1016 5.079406 CACGGTCAATTCTAAATGTTCGTG 58.921 41.667 0.00 0.00 37.52 4.35
496 1017 4.992319 ACGGTCAATTCTAAATGTTCGTGA 59.008 37.500 0.00 0.00 0.00 4.35
497 1018 5.642063 ACGGTCAATTCTAAATGTTCGTGAT 59.358 36.000 0.00 0.00 0.00 3.06
498 1019 6.183360 ACGGTCAATTCTAAATGTTCGTGATC 60.183 38.462 0.00 0.00 0.00 2.92
499 1020 6.185399 GGTCAATTCTAAATGTTCGTGATCG 58.815 40.000 0.00 0.00 38.55 3.69
500 1021 5.672856 GTCAATTCTAAATGTTCGTGATCGC 59.327 40.000 0.00 0.00 36.96 4.58
501 1022 3.899835 TTCTAAATGTTCGTGATCGCG 57.100 42.857 22.36 22.36 36.96 5.87
502 1023 2.871133 TCTAAATGTTCGTGATCGCGT 58.129 42.857 26.40 10.20 36.96 6.01
503 1024 2.850060 TCTAAATGTTCGTGATCGCGTC 59.150 45.455 26.40 20.12 36.96 5.19
504 1025 1.710013 AAATGTTCGTGATCGCGTCT 58.290 45.000 26.40 8.56 36.96 4.18
509 1030 2.850060 TGTTCGTGATCGCGTCTAAATC 59.150 45.455 26.40 8.22 36.96 2.17
525 1046 0.246635 AATCTCCGTGGACAAGGACG 59.753 55.000 2.77 1.18 35.20 4.79
531 1052 1.068474 CGTGGACAAGGACGAATGTC 58.932 55.000 0.00 0.00 44.07 3.06
580 1101 3.001406 ACTCCCTGGTGTACGGCC 61.001 66.667 0.00 0.00 0.00 6.13
812 1396 2.934428 GAGCATCAAGATCCGCGC 59.066 61.111 0.00 0.00 33.17 6.86
815 1399 3.341043 CATCAAGATCCGCGCCCG 61.341 66.667 0.00 0.00 0.00 6.13
816 1400 3.536917 ATCAAGATCCGCGCCCGA 61.537 61.111 0.00 0.00 36.29 5.14
817 1401 3.506059 ATCAAGATCCGCGCCCGAG 62.506 63.158 0.00 0.00 36.29 4.63
861 1445 3.818787 CCGATCCGTCCGTCCGTT 61.819 66.667 0.00 0.00 0.00 4.44
934 1530 1.142965 GCTCCTTTCCTCTCTCGCC 59.857 63.158 0.00 0.00 0.00 5.54
935 1531 1.326951 GCTCCTTTCCTCTCTCGCCT 61.327 60.000 0.00 0.00 0.00 5.52
936 1532 1.190643 CTCCTTTCCTCTCTCGCCTT 58.809 55.000 0.00 0.00 0.00 4.35
937 1533 1.552792 CTCCTTTCCTCTCTCGCCTTT 59.447 52.381 0.00 0.00 0.00 3.11
939 1535 1.406205 CCTTTCCTCTCTCGCCTTTCC 60.406 57.143 0.00 0.00 0.00 3.13
985 1595 2.122729 CTCTCCTCCCCACCACCA 59.877 66.667 0.00 0.00 0.00 4.17
1026 1636 2.146061 CCCCAAAAAGGCCAAGGCA 61.146 57.895 13.87 0.00 44.11 4.75
1524 2261 0.456312 GATCCGCTTGTTCGTCGACT 60.456 55.000 14.70 0.00 0.00 4.18
1526 2263 0.592637 TCCGCTTGTTCGTCGACTTA 59.407 50.000 14.70 0.00 0.00 2.24
1571 2308 5.856455 CGTTTTGCTAGTATTTTGTTCTGGG 59.144 40.000 0.00 0.00 0.00 4.45
1572 2309 5.975693 TTTGCTAGTATTTTGTTCTGGGG 57.024 39.130 0.00 0.00 0.00 4.96
1573 2310 3.352648 TGCTAGTATTTTGTTCTGGGGC 58.647 45.455 0.00 0.00 0.00 5.80
1574 2311 3.010138 TGCTAGTATTTTGTTCTGGGGCT 59.990 43.478 0.00 0.00 0.00 5.19
1575 2312 3.378427 GCTAGTATTTTGTTCTGGGGCTG 59.622 47.826 0.00 0.00 0.00 4.85
1576 2313 2.171003 AGTATTTTGTTCTGGGGCTGC 58.829 47.619 0.00 0.00 0.00 5.25
1577 2314 1.135402 GTATTTTGTTCTGGGGCTGCG 60.135 52.381 0.00 0.00 0.00 5.18
1620 2357 4.530857 CGGGTGGTGGAGATCGCC 62.531 72.222 8.81 8.81 46.03 5.54
1640 2377 3.873910 CCGGGTTATGTTCATCTTCTGT 58.126 45.455 0.00 0.00 0.00 3.41
1812 2550 4.202792 TGTTTCCTTCTCCCTTCTCTCCTA 60.203 45.833 0.00 0.00 0.00 2.94
1864 2606 0.315251 TATGGAGGATCTCTTGCGCG 59.685 55.000 0.00 0.00 33.73 6.86
1884 2626 2.162208 CGTCAGGGTGGATTCAAATGTG 59.838 50.000 0.00 0.00 0.00 3.21
1922 2664 4.513442 GGGAAAAGTGTTTTTGCTTTCCT 58.487 39.130 10.72 0.00 42.31 3.36
1930 2672 4.875536 GTGTTTTTGCTTTCCTTGTTCCAT 59.124 37.500 0.00 0.00 0.00 3.41
1933 2675 6.128063 TGTTTTTGCTTTCCTTGTTCCATTTG 60.128 34.615 0.00 0.00 0.00 2.32
1949 2691 0.867746 TTTGCAGATCACGTGCTGTC 59.132 50.000 19.92 13.79 41.78 3.51
1950 2692 0.249826 TTGCAGATCACGTGCTGTCA 60.250 50.000 19.92 15.95 41.78 3.58
1951 2693 0.037046 TGCAGATCACGTGCTGTCAT 60.037 50.000 19.92 5.81 41.78 3.06
1953 2695 1.004595 CAGATCACGTGCTGTCATGG 58.995 55.000 11.67 0.00 33.54 3.66
1955 2697 1.002366 GATCACGTGCTGTCATGGTC 58.998 55.000 11.67 0.00 33.54 4.02
1959 2701 1.230635 ACGTGCTGTCATGGTCTTGC 61.231 55.000 0.00 0.00 33.54 4.01
1973 2715 7.646922 GTCATGGTCTTGCATAAATCATTCTTC 59.353 37.037 0.00 0.00 0.00 2.87
2002 2744 3.147595 GCGAATTCCCTTGCCCCC 61.148 66.667 0.00 0.00 0.00 5.40
2052 2794 0.039617 TTTGGTGCGTGCTATGTTGC 60.040 50.000 0.00 0.00 0.00 4.17
2056 2798 2.100031 TGCGTGCTATGTTGCGGAG 61.100 57.895 0.00 0.00 35.36 4.63
2094 2836 3.680642 AATGCTTTCATTCCGTGATCG 57.319 42.857 0.00 0.00 38.47 3.69
2139 2881 5.067283 GTGATCCAACAACAGTACAAAGGTT 59.933 40.000 0.00 0.00 0.00 3.50
2231 2974 2.634453 TGAGCTGTGATGAAGAACTCCA 59.366 45.455 0.00 0.00 0.00 3.86
2459 3202 6.389830 ACATCATCTCTACTGTGATCTGAC 57.610 41.667 0.00 0.00 30.57 3.51
2460 3203 5.008514 ACATCATCTCTACTGTGATCTGACG 59.991 44.000 0.00 0.00 30.57 4.35
2487 3230 9.286170 GTCTGAACTCCTTTAAGTCCTTTTTAT 57.714 33.333 0.00 0.00 0.00 1.40
2661 3404 4.367450 CAAGGAAGATTGCAAACGGAAAA 58.633 39.130 1.71 0.00 0.00 2.29
2676 3419 3.057315 ACGGAAAAGACAATGCCAATCTG 60.057 43.478 0.00 0.00 0.00 2.90
2810 3553 3.731652 TGGAGCTGACAAAAATGGTTG 57.268 42.857 0.00 0.00 34.52 3.77
2811 3554 3.030291 TGGAGCTGACAAAAATGGTTGT 58.970 40.909 0.00 0.00 44.38 3.32
2812 3555 3.181477 TGGAGCTGACAAAAATGGTTGTG 60.181 43.478 0.00 0.00 41.78 3.33
2813 3556 3.383761 GAGCTGACAAAAATGGTTGTGG 58.616 45.455 0.00 0.00 41.78 4.17
2814 3557 2.765699 AGCTGACAAAAATGGTTGTGGT 59.234 40.909 0.00 0.00 41.78 4.16
2815 3558 3.197549 AGCTGACAAAAATGGTTGTGGTT 59.802 39.130 0.00 0.00 41.78 3.67
3514 4262 5.122396 GGTGAGCTCTTTTGGTATGTGTTAG 59.878 44.000 16.19 0.00 0.00 2.34
3565 4313 5.832060 TCTTCCTTATAAAGTACTCCCTCCG 59.168 44.000 0.00 0.00 0.00 4.63
3566 4314 5.134725 TCCTTATAAAGTACTCCCTCCGT 57.865 43.478 0.00 0.00 0.00 4.69
3567 4315 5.522641 TCCTTATAAAGTACTCCCTCCGTT 58.477 41.667 0.00 0.00 0.00 4.44
3568 4316 5.595952 TCCTTATAAAGTACTCCCTCCGTTC 59.404 44.000 0.00 0.00 0.00 3.95
3569 4317 5.221402 CCTTATAAAGTACTCCCTCCGTTCC 60.221 48.000 0.00 0.00 0.00 3.62
3570 4318 1.273759 AAAGTACTCCCTCCGTTCCC 58.726 55.000 0.00 0.00 0.00 3.97
3571 4319 0.115745 AAGTACTCCCTCCGTTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
3572 4320 0.115745 AGTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
3573 4321 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
3574 4322 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
3575 4323 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3576 4324 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
3577 4325 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
3578 4326 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
3579 4327 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
3580 4328 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
3581 4329 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
3582 4330 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
3583 4331 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
3584 4332 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
3585 4333 6.260271 CCTCCGTTCCCAAATATAAGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
3586 4334 6.954232 TCCGTTCCCAAATATAAGTCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
3587 4335 8.081517 TCCGTTCCCAAATATAAGTCTTTCTA 57.918 34.615 0.00 0.00 0.00 2.10
3588 4336 8.202137 TCCGTTCCCAAATATAAGTCTTTCTAG 58.798 37.037 0.00 0.00 0.00 2.43
3589 4337 8.202137 CCGTTCCCAAATATAAGTCTTTCTAGA 58.798 37.037 0.00 0.00 0.00 2.43
3590 4338 9.250624 CGTTCCCAAATATAAGTCTTTCTAGAG 57.749 37.037 0.00 0.00 0.00 2.43
3601 4349 9.796120 ATAAGTCTTTCTAGAGATTTCAACGAG 57.204 33.333 0.00 0.00 29.76 4.18
3602 4350 7.222000 AGTCTTTCTAGAGATTTCAACGAGT 57.778 36.000 0.00 0.00 0.00 4.18
3603 4351 7.087639 AGTCTTTCTAGAGATTTCAACGAGTG 58.912 38.462 0.00 0.00 0.00 3.51
3604 4352 7.040340 AGTCTTTCTAGAGATTTCAACGAGTGA 60.040 37.037 0.00 0.00 0.00 3.41
3605 4353 7.061326 GTCTTTCTAGAGATTTCAACGAGTGAC 59.939 40.741 0.00 0.00 35.39 3.67
3606 4354 6.576662 TTCTAGAGATTTCAACGAGTGACT 57.423 37.500 0.00 0.00 35.39 3.41
3607 4355 7.683437 TTCTAGAGATTTCAACGAGTGACTA 57.317 36.000 0.00 0.00 35.39 2.59
3608 4356 7.074507 TCTAGAGATTTCAACGAGTGACTAC 57.925 40.000 0.00 0.00 35.39 2.73
3609 4357 5.707242 AGAGATTTCAACGAGTGACTACA 57.293 39.130 0.00 0.00 35.39 2.74
3610 4358 6.274157 AGAGATTTCAACGAGTGACTACAT 57.726 37.500 0.00 0.00 35.39 2.29
3611 4359 7.392494 AGAGATTTCAACGAGTGACTACATA 57.608 36.000 0.00 0.00 35.39 2.29
3612 4360 7.251994 AGAGATTTCAACGAGTGACTACATAC 58.748 38.462 0.00 0.00 35.39 2.39
3613 4361 6.028368 AGATTTCAACGAGTGACTACATACG 58.972 40.000 0.00 0.00 35.39 3.06
3614 4362 3.752412 TCAACGAGTGACTACATACGG 57.248 47.619 0.00 0.00 34.15 4.02
3615 4363 3.337358 TCAACGAGTGACTACATACGGA 58.663 45.455 0.00 0.00 34.15 4.69
3616 4364 3.373130 TCAACGAGTGACTACATACGGAG 59.627 47.826 0.00 0.00 34.15 4.63
3617 4365 1.669779 ACGAGTGACTACATACGGAGC 59.330 52.381 0.00 0.00 34.15 4.70
3618 4366 1.669265 CGAGTGACTACATACGGAGCA 59.331 52.381 0.00 0.00 0.00 4.26
3619 4367 2.096980 CGAGTGACTACATACGGAGCAA 59.903 50.000 0.00 0.00 0.00 3.91
3620 4368 3.427098 CGAGTGACTACATACGGAGCAAA 60.427 47.826 0.00 0.00 0.00 3.68
3621 4369 4.491676 GAGTGACTACATACGGAGCAAAA 58.508 43.478 0.00 0.00 0.00 2.44
3622 4370 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3623 4371 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3624 4372 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3625 4373 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3626 4374 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3627 4375 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3628 4376 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3629 4377 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3630 4378 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3631 4379 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3632 4380 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3633 4381 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3634 4382 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3635 4383 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3636 4384 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3648 4396 6.763355 AGTGAATCTACACTCTCAAACATGT 58.237 36.000 0.00 0.00 46.36 3.21
3649 4397 6.870965 AGTGAATCTACACTCTCAAACATGTC 59.129 38.462 0.00 0.00 46.36 3.06
3650 4398 6.870965 GTGAATCTACACTCTCAAACATGTCT 59.129 38.462 0.00 0.00 37.73 3.41
3651 4399 8.029522 GTGAATCTACACTCTCAAACATGTCTA 58.970 37.037 0.00 0.00 37.73 2.59
3652 4400 8.029522 TGAATCTACACTCTCAAACATGTCTAC 58.970 37.037 0.00 0.00 0.00 2.59
3653 4401 6.894339 TCTACACTCTCAAACATGTCTACA 57.106 37.500 0.00 0.00 0.00 2.74
3654 4402 7.468141 TCTACACTCTCAAACATGTCTACAT 57.532 36.000 0.00 0.00 36.96 2.29
3655 4403 8.575649 TCTACACTCTCAAACATGTCTACATA 57.424 34.615 0.00 0.00 34.26 2.29
3656 4404 8.459635 TCTACACTCTCAAACATGTCTACATAC 58.540 37.037 0.00 0.00 34.26 2.39
3657 4405 6.993079 ACACTCTCAAACATGTCTACATACA 58.007 36.000 0.00 0.00 34.26 2.29
3658 4406 7.615403 ACACTCTCAAACATGTCTACATACAT 58.385 34.615 0.00 0.00 40.75 2.29
3659 4407 7.761704 ACACTCTCAAACATGTCTACATACATC 59.238 37.037 0.00 0.00 38.01 3.06
3660 4408 7.223582 CACTCTCAAACATGTCTACATACATCC 59.776 40.741 0.00 0.00 38.01 3.51
3661 4409 6.273071 TCTCAAACATGTCTACATACATCCG 58.727 40.000 0.00 0.00 38.01 4.18
3662 4410 5.972935 TCAAACATGTCTACATACATCCGT 58.027 37.500 0.00 0.00 38.01 4.69
3663 4411 7.067737 TCTCAAACATGTCTACATACATCCGTA 59.932 37.037 0.00 0.00 38.01 4.02
3664 4412 7.722363 TCAAACATGTCTACATACATCCGTAT 58.278 34.615 0.00 0.00 38.01 3.06
3665 4413 8.852135 TCAAACATGTCTACATACATCCGTATA 58.148 33.333 0.00 0.00 38.01 1.47
3666 4414 9.639601 CAAACATGTCTACATACATCCGTATAT 57.360 33.333 0.00 0.00 38.01 0.86
3668 4416 9.639601 AACATGTCTACATACATCCGTATATTG 57.360 33.333 0.00 0.00 38.01 1.90
3669 4417 8.803235 ACATGTCTACATACATCCGTATATTGT 58.197 33.333 0.00 0.00 38.01 2.71
3672 4420 9.511272 TGTCTACATACATCCGTATATTGTAGT 57.489 33.333 0.00 0.00 38.60 2.73
3673 4421 9.985318 GTCTACATACATCCGTATATTGTAGTC 57.015 37.037 0.00 0.00 38.60 2.59
3674 4422 9.170734 TCTACATACATCCGTATATTGTAGTCC 57.829 37.037 0.00 0.00 38.60 3.85
3675 4423 7.770366 ACATACATCCGTATATTGTAGTCCA 57.230 36.000 0.00 0.00 36.11 4.02
3676 4424 8.362464 ACATACATCCGTATATTGTAGTCCAT 57.638 34.615 0.00 0.00 36.11 3.41
3677 4425 8.812972 ACATACATCCGTATATTGTAGTCCATT 58.187 33.333 0.00 0.00 36.11 3.16
3678 4426 9.653287 CATACATCCGTATATTGTAGTCCATTT 57.347 33.333 0.00 0.00 36.11 2.32
3679 4427 7.962964 ACATCCGTATATTGTAGTCCATTTG 57.037 36.000 0.00 0.00 0.00 2.32
3680 4428 7.732025 ACATCCGTATATTGTAGTCCATTTGA 58.268 34.615 0.00 0.00 0.00 2.69
3681 4429 8.208224 ACATCCGTATATTGTAGTCCATTTGAA 58.792 33.333 0.00 0.00 0.00 2.69
3682 4430 9.051679 CATCCGTATATTGTAGTCCATTTGAAA 57.948 33.333 0.00 0.00 0.00 2.69
3683 4431 9.793259 ATCCGTATATTGTAGTCCATTTGAAAT 57.207 29.630 0.00 0.00 0.00 2.17
3684 4432 9.051679 TCCGTATATTGTAGTCCATTTGAAATG 57.948 33.333 10.84 10.84 0.00 2.32
3685 4433 8.836413 CCGTATATTGTAGTCCATTTGAAATGT 58.164 33.333 15.93 1.43 0.00 2.71
3686 4434 9.864034 CGTATATTGTAGTCCATTTGAAATGTC 57.136 33.333 15.93 9.10 0.00 3.06
3696 4444 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
3697 4445 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
3712 4460 5.413969 AAAGACTTTTTAGGAACGAACGG 57.586 39.130 0.00 0.00 0.00 4.44
3717 4465 5.225642 ACTTTTTAGGAACGAACGGAGTAG 58.774 41.667 0.00 0.00 45.00 2.57
3741 4489 5.019657 ACTCCCTCCGGTCCATATTAATA 57.980 43.478 0.00 0.00 0.00 0.98
3742 4490 5.600749 ACTCCCTCCGGTCCATATTAATAT 58.399 41.667 0.00 1.91 0.00 1.28
3743 4491 5.425539 ACTCCCTCCGGTCCATATTAATATG 59.574 44.000 23.28 23.28 39.80 1.78
3759 4549 7.793948 ATTAATATGGACTGTAGGGGAGTAC 57.206 40.000 0.00 0.00 0.00 2.73
4074 4864 7.775053 TTTCCTAAATGTGTGCCTTTTCTAT 57.225 32.000 0.00 0.00 0.00 1.98
4342 5296 7.442666 AGAAGAGAACTGTTTCTTTCCATGTAC 59.557 37.037 14.61 0.00 42.53 2.90
5678 6749 2.307934 AAGTGGTGTTGCGCAAAAAT 57.692 40.000 26.87 7.46 0.00 1.82
6039 7538 2.366916 GCAGTGAGGCTCATACCACTAT 59.633 50.000 21.84 0.00 37.74 2.12
6062 7561 2.031919 TCGGGCGCTTGTGATGTT 59.968 55.556 7.64 0.00 0.00 2.71
6425 7925 4.513198 TTTTCCTTAAAATCTGGTGCGG 57.487 40.909 0.00 0.00 29.59 5.69
6426 7926 3.426787 TTCCTTAAAATCTGGTGCGGA 57.573 42.857 0.00 0.00 0.00 5.54
6427 7927 2.706890 TCCTTAAAATCTGGTGCGGAC 58.293 47.619 0.00 0.00 0.00 4.79
6429 7929 2.161609 CCTTAAAATCTGGTGCGGACAC 59.838 50.000 9.96 0.00 46.66 3.67
6440 7940 3.559238 GTGCGGACACAGAATTTTGAT 57.441 42.857 0.63 0.00 46.61 2.57
6441 7941 4.678509 GTGCGGACACAGAATTTTGATA 57.321 40.909 0.63 0.00 46.61 2.15
6442 7942 5.041951 GTGCGGACACAGAATTTTGATAA 57.958 39.130 0.63 0.00 46.61 1.75
6443 7943 5.088739 GTGCGGACACAGAATTTTGATAAG 58.911 41.667 0.63 0.00 46.61 1.73
6444 7944 4.759693 TGCGGACACAGAATTTTGATAAGT 59.240 37.500 2.48 0.00 0.00 2.24
6446 7946 6.597672 TGCGGACACAGAATTTTGATAAGTAT 59.402 34.615 2.48 0.00 0.00 2.12
6652 8162 1.066929 TGAACTCGCATCAAGCTAGCA 60.067 47.619 18.83 0.00 39.52 3.49
7184 12983 7.972301 AGGAGTTGATATGAAAATAGAGAGGG 58.028 38.462 0.00 0.00 0.00 4.30
7297 13097 8.812972 TGTAAATGAGTAAGATAGTGAAGTGGT 58.187 33.333 0.00 0.00 0.00 4.16
7330 13134 3.076621 TCCATCTTGCAAGTGTGATGTC 58.923 45.455 25.19 0.00 35.76 3.06
7356 13160 7.485913 CGCTGCTATGAATGTTATCTTTTGTTT 59.514 33.333 0.00 0.00 0.00 2.83
7403 13207 7.744087 ATTCTTGTAACTTTCATGTGTAGCA 57.256 32.000 0.00 0.00 0.00 3.49
7477 13297 0.685097 TGGAAAGAAGTCGGTCAGGG 59.315 55.000 0.00 0.00 0.00 4.45
7478 13298 0.673956 GGAAAGAAGTCGGTCAGGGC 60.674 60.000 0.00 0.00 0.00 5.19
7479 13299 1.004918 AAAGAAGTCGGTCAGGGCG 60.005 57.895 0.00 0.00 0.00 6.13
7480 13300 3.591254 AAGAAGTCGGTCAGGGCGC 62.591 63.158 0.00 0.00 0.00 6.53
7547 13441 3.486542 GGACTACGTGTTGGAGTCGTATC 60.487 52.174 8.84 0.00 40.46 2.24
7551 13446 2.483877 ACGTGTTGGAGTCGTATCGTTA 59.516 45.455 0.00 0.00 36.05 3.18
7553 13448 3.541130 CGTGTTGGAGTCGTATCGTTAAG 59.459 47.826 0.00 0.00 0.00 1.85
7566 13461 4.850347 ATCGTTAAGGTTAGGATCCGAG 57.150 45.455 5.98 0.00 0.00 4.63
7567 13462 3.624777 TCGTTAAGGTTAGGATCCGAGT 58.375 45.455 5.98 0.00 0.00 4.18
7568 13463 3.629398 TCGTTAAGGTTAGGATCCGAGTC 59.371 47.826 5.98 0.00 0.00 3.36
7569 13464 3.631227 CGTTAAGGTTAGGATCCGAGTCT 59.369 47.826 5.98 0.41 0.00 3.24
7570 13465 4.097589 CGTTAAGGTTAGGATCCGAGTCTT 59.902 45.833 5.98 11.57 0.00 3.01
7571 13466 5.297776 CGTTAAGGTTAGGATCCGAGTCTTA 59.702 44.000 5.98 10.63 0.00 2.10
7572 13467 6.016443 CGTTAAGGTTAGGATCCGAGTCTTAT 60.016 42.308 5.98 0.00 0.00 1.73
7573 13468 7.173907 CGTTAAGGTTAGGATCCGAGTCTTATA 59.826 40.741 5.98 3.46 0.00 0.98
7574 13469 8.854117 GTTAAGGTTAGGATCCGAGTCTTATAA 58.146 37.037 5.98 0.00 0.00 0.98
7576 13471 7.287512 AGGTTAGGATCCGAGTCTTATAAAC 57.712 40.000 5.98 0.00 0.00 2.01
7578 13473 6.453943 GTTAGGATCCGAGTCTTATAAACCC 58.546 44.000 5.98 0.00 0.00 4.11
7579 13474 3.902467 AGGATCCGAGTCTTATAAACCCC 59.098 47.826 5.98 0.00 0.00 4.95
7580 13475 3.305881 GGATCCGAGTCTTATAAACCCCG 60.306 52.174 0.00 0.00 0.00 5.73
7581 13476 3.017048 TCCGAGTCTTATAAACCCCGA 57.983 47.619 0.00 0.00 0.00 5.14
7582 13477 2.689983 TCCGAGTCTTATAAACCCCGAC 59.310 50.000 0.00 0.00 0.00 4.79
7583 13478 2.428171 CCGAGTCTTATAAACCCCGACA 59.572 50.000 5.04 0.00 0.00 4.35
7584 13479 3.490419 CCGAGTCTTATAAACCCCGACAG 60.490 52.174 5.04 0.07 0.00 3.51
7585 13480 3.490419 CGAGTCTTATAAACCCCGACAGG 60.490 52.174 5.04 0.00 37.24 4.00
7587 13482 3.450096 AGTCTTATAAACCCCGACAGGAC 59.550 47.826 5.04 0.00 41.02 3.85
7588 13483 2.428171 TCTTATAAACCCCGACAGGACG 59.572 50.000 0.00 0.00 41.02 4.79
7590 13485 0.822164 ATAAACCCCGACAGGACGAG 59.178 55.000 0.00 0.00 41.02 4.18
7592 13487 1.813728 AAACCCCGACAGGACGAGAC 61.814 60.000 0.00 0.00 41.02 3.36
7593 13488 2.675423 CCCCGACAGGACGAGACA 60.675 66.667 0.00 0.00 41.02 3.41
7596 13491 0.246635 CCCGACAGGACGAGACAAAT 59.753 55.000 0.00 0.00 41.02 2.32
7598 13493 2.094390 CCCGACAGGACGAGACAAATAA 60.094 50.000 0.00 0.00 41.02 1.40
7599 13494 3.430374 CCCGACAGGACGAGACAAATAAT 60.430 47.826 0.00 0.00 41.02 1.28
7600 13495 4.202080 CCCGACAGGACGAGACAAATAATA 60.202 45.833 0.00 0.00 41.02 0.98
7601 13496 5.345702 CCGACAGGACGAGACAAATAATAA 58.654 41.667 0.00 0.00 41.02 1.40
7602 13497 5.983720 CCGACAGGACGAGACAAATAATAAT 59.016 40.000 0.00 0.00 41.02 1.28
7603 13498 6.144080 CCGACAGGACGAGACAAATAATAATC 59.856 42.308 0.00 0.00 41.02 1.75
7606 13501 7.434492 ACAGGACGAGACAAATAATAATCGAT 58.566 34.615 0.00 0.00 34.46 3.59
7607 13502 7.595502 ACAGGACGAGACAAATAATAATCGATC 59.404 37.037 0.00 0.00 34.46 3.69
7608 13503 7.810282 CAGGACGAGACAAATAATAATCGATCT 59.190 37.037 0.00 0.00 34.46 2.75
7611 13506 7.434492 ACGAGACAAATAATAATCGATCTGGT 58.566 34.615 0.00 0.00 34.46 4.00
7612 13507 7.926555 ACGAGACAAATAATAATCGATCTGGTT 59.073 33.333 0.00 0.00 34.46 3.67
7613 13508 8.217115 CGAGACAAATAATAATCGATCTGGTTG 58.783 37.037 0.00 1.96 32.13 3.77
7614 13509 7.865707 AGACAAATAATAATCGATCTGGTTGC 58.134 34.615 0.00 0.00 0.00 4.17
7615 13510 6.658831 ACAAATAATAATCGATCTGGTTGCG 58.341 36.000 0.00 0.00 0.00 4.85
7616 13511 6.260050 ACAAATAATAATCGATCTGGTTGCGT 59.740 34.615 0.00 0.00 0.00 5.24
7618 13513 1.286501 TAATCGATCTGGTTGCGTGC 58.713 50.000 0.00 0.00 0.00 5.34
7619 13514 0.673333 AATCGATCTGGTTGCGTGCA 60.673 50.000 0.00 0.00 0.00 4.57
7620 13515 0.673333 ATCGATCTGGTTGCGTGCAA 60.673 50.000 2.58 2.58 0.00 4.08
7621 13516 0.882484 TCGATCTGGTTGCGTGCAAA 60.882 50.000 9.13 0.00 37.70 3.68
7622 13517 0.168788 CGATCTGGTTGCGTGCAAAT 59.831 50.000 9.13 0.00 37.70 2.32
7623 13518 1.791555 CGATCTGGTTGCGTGCAAATC 60.792 52.381 9.13 7.74 37.70 2.17
7624 13519 0.168788 ATCTGGTTGCGTGCAAATCG 59.831 50.000 9.13 0.80 37.70 3.34
7625 13520 0.882484 TCTGGTTGCGTGCAAATCGA 60.882 50.000 9.13 3.17 37.70 3.59
7626 13521 0.453282 CTGGTTGCGTGCAAATCGAG 60.453 55.000 9.13 1.14 37.70 4.04
7627 13522 1.797537 GGTTGCGTGCAAATCGAGC 60.798 57.895 9.13 0.00 37.70 5.03
7628 13523 1.082169 GTTGCGTGCAAATCGAGCA 60.082 52.632 9.13 0.00 40.19 4.26
7629 13524 1.061799 GTTGCGTGCAAATCGAGCAG 61.062 55.000 9.13 0.00 43.63 4.24
7630 13525 2.575262 GCGTGCAAATCGAGCAGC 60.575 61.111 0.00 0.00 43.63 5.25
7632 13527 2.099062 GTGCAAATCGAGCAGCCG 59.901 61.111 0.00 0.00 43.63 5.52
7633 13528 2.358615 TGCAAATCGAGCAGCCGT 60.359 55.556 0.00 0.00 37.02 5.68
7635 13530 2.787249 CAAATCGAGCAGCCGTGG 59.213 61.111 0.00 0.00 0.00 4.94
7636 13531 2.034879 CAAATCGAGCAGCCGTGGT 61.035 57.895 0.00 0.00 37.01 4.16
7637 13532 2.034879 AAATCGAGCAGCCGTGGTG 61.035 57.895 0.00 0.00 33.41 4.17
7638 13533 2.731691 AAATCGAGCAGCCGTGGTGT 62.732 55.000 0.00 0.00 33.41 4.16
7649 13544 4.632037 GTGGTGTACGTGCGTGTA 57.368 55.556 7.55 0.00 0.00 2.90
7650 13545 3.111536 GTGGTGTACGTGCGTGTAT 57.888 52.632 7.55 0.00 0.00 2.29
7651 13546 0.986992 GTGGTGTACGTGCGTGTATC 59.013 55.000 7.55 0.00 0.00 2.24
7653 13548 1.135603 TGGTGTACGTGCGTGTATCTC 60.136 52.381 7.55 0.00 0.00 2.75
7654 13549 1.177668 GTGTACGTGCGTGTATCTCG 58.822 55.000 7.55 0.00 0.00 4.04
7660 13555 2.654404 GCGTGTATCTCGCCGGAC 60.654 66.667 5.05 0.00 46.61 4.79
7661 13556 2.025727 CGTGTATCTCGCCGGACC 59.974 66.667 5.05 0.00 0.00 4.46
7662 13557 2.767445 CGTGTATCTCGCCGGACCA 61.767 63.158 5.05 0.00 0.00 4.02
7664 13559 1.379443 TGTATCTCGCCGGACCAGT 60.379 57.895 5.05 0.00 0.00 4.00
7666 13561 1.077285 TATCTCGCCGGACCAGTCA 60.077 57.895 5.05 0.00 0.00 3.41
7667 13562 0.467474 TATCTCGCCGGACCAGTCAT 60.467 55.000 5.05 0.00 0.00 3.06
7671 13566 1.375396 CGCCGGACCAGTCATCAAA 60.375 57.895 5.05 0.00 0.00 2.69
7672 13567 1.361668 CGCCGGACCAGTCATCAAAG 61.362 60.000 5.05 0.00 0.00 2.77
7673 13568 1.648467 GCCGGACCAGTCATCAAAGC 61.648 60.000 5.05 0.00 0.00 3.51
7674 13569 0.036010 CCGGACCAGTCATCAAAGCT 60.036 55.000 0.00 0.00 0.00 3.74
7675 13570 1.611673 CCGGACCAGTCATCAAAGCTT 60.612 52.381 0.00 0.00 0.00 3.74
7681 14839 3.243636 ACCAGTCATCAAAGCTTGCTTTG 60.244 43.478 30.91 30.91 43.50 2.77
7692 14850 0.164647 CTTGCTTTGCTTCCTCGTCG 59.835 55.000 0.00 0.00 0.00 5.12
7694 14852 0.944311 TGCTTTGCTTCCTCGTCGTC 60.944 55.000 0.00 0.00 0.00 4.20
7700 14858 2.049802 TTCCTCGTCGTCGTTGCC 60.050 61.111 1.33 0.00 38.33 4.52
7704 14862 3.884581 CTCGTCGTCGTTGCCGGAA 62.885 63.158 5.05 0.00 38.33 4.30
7706 14864 2.355481 GTCGTCGTTGCCGGAAGT 60.355 61.111 5.05 0.00 33.95 3.01
7707 14865 2.355363 TCGTCGTTGCCGGAAGTG 60.355 61.111 5.05 0.00 33.95 3.16
7708 14866 4.072088 CGTCGTTGCCGGAAGTGC 62.072 66.667 5.05 0.00 33.95 4.40
7709 14867 2.665185 GTCGTTGCCGGAAGTGCT 60.665 61.111 5.05 0.00 33.95 4.40
7710 14868 2.357034 TCGTTGCCGGAAGTGCTC 60.357 61.111 5.05 0.00 33.95 4.26
7712 14870 2.357034 GTTGCCGGAAGTGCTCGA 60.357 61.111 5.05 0.00 0.00 4.04
7713 14871 2.048222 TTGCCGGAAGTGCTCGAG 60.048 61.111 5.05 8.45 0.00 4.04
7714 14872 3.589654 TTGCCGGAAGTGCTCGAGG 62.590 63.158 15.58 0.00 0.00 4.63
7716 14874 3.764466 CCGGAAGTGCTCGAGGCT 61.764 66.667 15.58 0.00 42.39 4.58
7719 14877 2.125350 GAAGTGCTCGAGGCTGGG 60.125 66.667 15.58 0.00 42.39 4.45
7720 14878 4.400961 AAGTGCTCGAGGCTGGGC 62.401 66.667 15.58 0.00 42.39 5.36
7731 14889 4.603535 GCTGGGCCAACTGTGGGT 62.604 66.667 8.04 0.00 46.09 4.51
7732 14890 2.598394 CTGGGCCAACTGTGGGTG 60.598 66.667 8.04 0.00 46.09 4.61
7733 14891 4.217210 TGGGCCAACTGTGGGTGG 62.217 66.667 2.13 0.00 46.09 4.61
7734 14892 4.994756 GGGCCAACTGTGGGTGGG 62.995 72.222 4.39 0.00 46.09 4.61
7735 14893 3.897122 GGCCAACTGTGGGTGGGA 61.897 66.667 2.58 0.00 46.09 4.37
7736 14894 2.440599 GCCAACTGTGGGTGGGAT 59.559 61.111 2.58 0.00 46.09 3.85
7737 14895 1.978617 GCCAACTGTGGGTGGGATG 60.979 63.158 2.58 0.00 46.09 3.51
7738 14896 1.304381 CCAACTGTGGGTGGGATGG 60.304 63.158 0.00 0.00 41.61 3.51
7739 14897 1.304381 CAACTGTGGGTGGGATGGG 60.304 63.158 0.00 0.00 0.00 4.00
7748 14906 0.779997 GGTGGGATGGGAATGCCTAT 59.220 55.000 0.00 0.00 38.20 2.57
7761 14919 1.878522 GCCTATGCACGTCCACTCG 60.879 63.158 0.00 0.00 37.47 4.18
7784 14942 2.181021 GCCGACGGTCACGAAGAT 59.819 61.111 16.73 0.00 44.60 2.40
7785 14943 2.158959 GCCGACGGTCACGAAGATG 61.159 63.158 16.73 0.00 44.60 2.90
7787 14945 0.797249 CCGACGGTCACGAAGATGAC 60.797 60.000 5.48 0.00 46.95 3.06
7791 14949 3.374330 GTCACGAAGATGACGCCG 58.626 61.111 0.00 0.00 39.69 6.46
7792 14950 2.506217 TCACGAAGATGACGCCGC 60.506 61.111 0.00 0.00 0.00 6.53
7793 14951 3.554692 CACGAAGATGACGCCGCC 61.555 66.667 0.00 0.00 0.00 6.13
7812 14970 3.197790 CTGCCGGCCACGAAGATG 61.198 66.667 26.77 0.00 44.60 2.90
7813 14971 3.664025 CTGCCGGCCACGAAGATGA 62.664 63.158 26.77 0.00 44.60 2.92
7814 14972 2.435938 GCCGGCCACGAAGATGAA 60.436 61.111 18.11 0.00 44.60 2.57
7815 14973 2.464459 GCCGGCCACGAAGATGAAG 61.464 63.158 18.11 0.00 44.60 3.02
7816 14974 1.218047 CCGGCCACGAAGATGAAGA 59.782 57.895 2.24 0.00 44.60 2.87
7817 14975 0.179073 CCGGCCACGAAGATGAAGAT 60.179 55.000 2.24 0.00 44.60 2.40
7818 14976 1.212616 CGGCCACGAAGATGAAGATC 58.787 55.000 2.24 0.00 44.60 2.75
7819 14977 1.471501 CGGCCACGAAGATGAAGATCA 60.472 52.381 2.24 0.00 44.60 2.92
7820 14978 1.936547 GGCCACGAAGATGAAGATCAC 59.063 52.381 0.00 0.00 0.00 3.06
7821 14979 1.590238 GCCACGAAGATGAAGATCACG 59.410 52.381 0.00 0.00 36.99 4.35
7822 14980 2.881074 CCACGAAGATGAAGATCACGT 58.119 47.619 0.00 0.00 41.27 4.49
7823 14981 2.854777 CCACGAAGATGAAGATCACGTC 59.145 50.000 0.00 0.00 39.82 4.34
7824 14982 2.527887 CACGAAGATGAAGATCACGTCG 59.472 50.000 0.00 0.00 39.82 5.12
7825 14983 1.514811 CGAAGATGAAGATCACGTCGC 59.485 52.381 0.00 0.00 29.66 5.19
7826 14984 1.855360 GAAGATGAAGATCACGTCGCC 59.145 52.381 0.00 0.00 0.00 5.54
7827 14985 0.248661 AGATGAAGATCACGTCGCCG 60.249 55.000 0.00 0.00 40.83 6.46
7828 14986 1.812214 GATGAAGATCACGTCGCCGC 61.812 60.000 0.00 0.00 37.70 6.53
7829 14987 2.202623 GAAGATCACGTCGCCGCT 60.203 61.111 0.00 0.00 37.70 5.52
7830 14988 2.507102 AAGATCACGTCGCCGCTG 60.507 61.111 0.00 0.00 37.70 5.18
7863 15021 2.483745 GCGTCGTCCACATCGAGA 59.516 61.111 0.00 0.00 37.99 4.04
7872 15030 1.953686 TCCACATCGAGACGCATCATA 59.046 47.619 0.00 0.00 0.00 2.15
7882 15043 0.455815 ACGCATCATAGAGCACGTCA 59.544 50.000 0.00 0.00 0.00 4.35
7886 15047 2.467838 CATCATAGAGCACGTCACCAG 58.532 52.381 0.00 0.00 0.00 4.00
7887 15048 0.817654 TCATAGAGCACGTCACCAGG 59.182 55.000 0.00 0.00 0.00 4.45
7896 15057 3.952811 GTCACCAGGACGTTCAGC 58.047 61.111 0.00 0.00 36.65 4.26
7900 15061 1.006102 ACCAGGACGTTCAGCTTCG 60.006 57.895 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 0.687427 TGCCCTGTGATCTGATCGGA 60.687 55.000 6.72 6.72 0.00 4.55
14 15 1.509703 CATGCCCTGTGATCTGATCG 58.490 55.000 12.65 0.00 0.00 3.69
121 146 8.827677 ACGACTATAAGACCTCAAATTAATTGC 58.172 33.333 0.39 0.00 38.98 3.56
128 153 8.064336 ACAACTACGACTATAAGACCTCAAAT 57.936 34.615 0.00 0.00 0.00 2.32
140 166 7.657023 AAAGGGAGATTACAACTACGACTAT 57.343 36.000 0.00 0.00 0.00 2.12
173 199 9.219603 CAGAACACTAGATAGAACCAAAATGAA 57.780 33.333 0.00 0.00 0.00 2.57
192 218 8.166367 GAGCAATTATTTGATCAACAGAACAC 57.834 34.615 7.89 0.00 45.46 3.32
202 228 9.709495 ATGTCTCTAGAGAGCAATTATTTGATC 57.291 33.333 22.95 6.50 46.28 2.92
206 345 7.721402 ACGATGTCTCTAGAGAGCAATTATTT 58.279 34.615 22.95 7.85 41.80 1.40
219 358 6.586463 TCTTGCAGTAAAAACGATGTCTCTAG 59.414 38.462 0.00 0.00 0.00 2.43
222 361 5.591643 TCTTGCAGTAAAAACGATGTCTC 57.408 39.130 0.00 0.00 0.00 3.36
224 363 4.151798 GCTCTTGCAGTAAAAACGATGTC 58.848 43.478 0.00 0.00 39.41 3.06
226 365 4.145876 TGCTCTTGCAGTAAAAACGATG 57.854 40.909 0.00 0.00 45.31 3.84
280 420 1.336517 TGAAACGCTCTTACAGGACGG 60.337 52.381 0.00 0.00 0.00 4.79
281 421 1.719780 GTGAAACGCTCTTACAGGACG 59.280 52.381 0.00 0.00 0.00 4.79
286 426 4.579454 ACACTAGTGAAACGCTCTTACA 57.421 40.909 29.30 0.00 45.86 2.41
287 427 6.998258 TTTACACTAGTGAAACGCTCTTAC 57.002 37.500 29.30 0.00 45.86 2.34
314 798 9.288576 CTCACTTCATCCCATTATATAAAAGCA 57.711 33.333 0.00 0.00 0.00 3.91
325 809 9.561069 GTATTGTATTACTCACTTCATCCCATT 57.439 33.333 0.00 0.00 0.00 3.16
456 942 5.972935 TGACCGTGCTTATCTTTAGATTCA 58.027 37.500 0.00 0.00 36.05 2.57
473 994 4.992319 TCACGAACATTTAGAATTGACCGT 59.008 37.500 0.00 0.00 0.00 4.83
478 999 4.661776 CGCGATCACGAACATTTAGAATTG 59.338 41.667 0.00 0.00 42.66 2.32
479 1000 4.328983 ACGCGATCACGAACATTTAGAATT 59.671 37.500 15.93 0.00 42.66 2.17
482 1003 2.850060 GACGCGATCACGAACATTTAGA 59.150 45.455 15.93 0.00 42.66 2.10
483 1004 2.852413 AGACGCGATCACGAACATTTAG 59.148 45.455 15.93 0.00 42.66 1.85
484 1005 2.871133 AGACGCGATCACGAACATTTA 58.129 42.857 15.93 0.00 42.66 1.40
486 1007 2.554806 TAGACGCGATCACGAACATT 57.445 45.000 15.93 0.00 42.66 2.71
487 1008 2.554806 TTAGACGCGATCACGAACAT 57.445 45.000 15.93 0.00 42.66 2.71
488 1009 2.334971 TTTAGACGCGATCACGAACA 57.665 45.000 15.93 0.00 42.66 3.18
489 1010 3.106672 AGATTTAGACGCGATCACGAAC 58.893 45.455 15.93 3.77 42.66 3.95
493 1014 2.044860 CGGAGATTTAGACGCGATCAC 58.955 52.381 15.93 3.09 0.00 3.06
494 1015 1.674441 ACGGAGATTTAGACGCGATCA 59.326 47.619 15.93 0.00 0.00 2.92
495 1016 2.044860 CACGGAGATTTAGACGCGATC 58.955 52.381 15.93 4.58 0.00 3.69
496 1017 1.269102 CCACGGAGATTTAGACGCGAT 60.269 52.381 15.93 2.85 0.00 4.58
497 1018 0.099968 CCACGGAGATTTAGACGCGA 59.900 55.000 15.93 0.00 0.00 5.87
498 1019 0.099968 TCCACGGAGATTTAGACGCG 59.900 55.000 3.53 3.53 0.00 6.01
499 1020 1.135199 TGTCCACGGAGATTTAGACGC 60.135 52.381 0.00 0.00 0.00 5.19
500 1021 2.933495 TGTCCACGGAGATTTAGACG 57.067 50.000 0.00 0.00 0.00 4.18
501 1022 3.194968 TCCTTGTCCACGGAGATTTAGAC 59.805 47.826 0.00 0.00 0.00 2.59
502 1023 3.194968 GTCCTTGTCCACGGAGATTTAGA 59.805 47.826 0.00 0.00 28.60 2.10
503 1024 3.522553 GTCCTTGTCCACGGAGATTTAG 58.477 50.000 0.00 0.00 28.60 1.85
504 1025 2.094390 CGTCCTTGTCCACGGAGATTTA 60.094 50.000 0.00 0.00 32.19 1.40
509 1030 0.246635 ATTCGTCCTTGTCCACGGAG 59.753 55.000 0.00 0.00 36.64 4.63
525 1046 9.143631 CAAACCATTTCTAGATTTTGGACATTC 57.856 33.333 18.15 0.00 0.00 2.67
531 1052 7.895759 TCCTTCAAACCATTTCTAGATTTTGG 58.104 34.615 12.31 12.31 0.00 3.28
532 1053 8.579863 ACTCCTTCAAACCATTTCTAGATTTTG 58.420 33.333 0.00 0.00 0.00 2.44
533 1054 8.712228 ACTCCTTCAAACCATTTCTAGATTTT 57.288 30.769 0.00 0.00 0.00 1.82
580 1101 2.749621 GTGTAATCAGGGCAACTCCAAG 59.250 50.000 0.00 0.00 36.21 3.61
669 1245 1.983972 CTGGCGTCTGTAACTCTGTC 58.016 55.000 0.00 0.00 0.00 3.51
796 1380 2.590007 GGCGCGGATCTTGATGCT 60.590 61.111 8.83 0.00 0.00 3.79
831 1415 4.615815 ATCGGGCGCTGCTGGATC 62.616 66.667 7.64 0.00 0.00 3.36
832 1416 4.615815 GATCGGGCGCTGCTGGAT 62.616 66.667 7.64 3.05 0.00 3.41
923 1519 2.711922 GCGGAAAGGCGAGAGAGGA 61.712 63.158 0.00 0.00 0.00 3.71
934 1530 2.510238 CGAGGCAGAGGCGGAAAG 60.510 66.667 0.00 0.00 42.47 2.62
935 1531 3.296709 GACGAGGCAGAGGCGGAAA 62.297 63.158 0.00 0.00 42.47 3.13
936 1532 3.760035 GACGAGGCAGAGGCGGAA 61.760 66.667 0.00 0.00 42.47 4.30
1501 2238 1.144969 GACGAACAAGCGGATCACAA 58.855 50.000 0.00 0.00 35.12 3.33
1620 2357 4.503910 TCACAGAAGATGAACATAACCCG 58.496 43.478 0.00 0.00 0.00 5.28
1713 2451 4.344679 ACAATTCCCAGCACAATTTTCTCA 59.655 37.500 0.00 0.00 0.00 3.27
1864 2606 2.493278 CCACATTTGAATCCACCCTGAC 59.507 50.000 0.00 0.00 0.00 3.51
1884 2626 0.830648 TCCCGTGATCTGGATGAACC 59.169 55.000 6.18 0.00 39.54 3.62
1922 2664 6.848832 GCACGTGATCTGCAAATGGAACAA 62.849 45.833 22.23 0.00 36.79 2.83
1930 2672 0.867746 GACAGCACGTGATCTGCAAA 59.132 50.000 22.23 0.00 37.08 3.68
1933 2675 0.372679 CATGACAGCACGTGATCTGC 59.627 55.000 22.23 13.67 33.80 4.26
1949 2691 7.648112 CAGAAGAATGATTTATGCAAGACCATG 59.352 37.037 0.00 0.00 0.00 3.66
1950 2692 7.201884 CCAGAAGAATGATTTATGCAAGACCAT 60.202 37.037 0.00 0.00 0.00 3.55
1951 2693 6.095860 CCAGAAGAATGATTTATGCAAGACCA 59.904 38.462 0.00 0.00 0.00 4.02
1953 2695 7.325660 TCCAGAAGAATGATTTATGCAAGAC 57.674 36.000 0.00 0.00 0.00 3.01
1955 2697 8.167605 AGATCCAGAAGAATGATTTATGCAAG 57.832 34.615 0.00 0.00 0.00 4.01
1959 2701 7.828223 CCCCTAGATCCAGAAGAATGATTTATG 59.172 40.741 0.00 0.00 0.00 1.90
1973 2715 1.002544 GGAATTCGCCCCTAGATCCAG 59.997 57.143 0.00 0.00 0.00 3.86
2025 2767 2.282887 ACGCACCAAATCCCCACC 60.283 61.111 0.00 0.00 0.00 4.61
2052 2794 7.219154 GCATTCGTCTATTATGACTTATCTCCG 59.781 40.741 0.00 0.00 35.00 4.63
2094 2836 3.246226 ACACAATCGAGCATAATCGCTTC 59.754 43.478 0.00 0.00 44.01 3.86
2170 2913 4.563140 ACCGGTAATTCCATTACACTGT 57.437 40.909 4.49 0.00 45.32 3.55
2231 2974 4.408921 TCAATGGTATCGAGAAATCCACCT 59.591 41.667 0.00 0.00 0.00 4.00
2459 3202 3.258622 AGGACTTAAAGGAGTTCAGACCG 59.741 47.826 0.00 0.00 0.00 4.79
2460 3203 4.893829 AGGACTTAAAGGAGTTCAGACC 57.106 45.455 0.00 0.00 0.00 3.85
2661 3404 1.180029 GCACCAGATTGGCATTGTCT 58.820 50.000 0.00 0.00 42.67 3.41
2676 3419 1.662044 CACAAAAGCTCCCAGCACC 59.338 57.895 0.00 0.00 45.56 5.01
2810 3553 1.111277 AGTCCTGGCAAAACAACCAC 58.889 50.000 0.00 0.00 0.00 4.16
2811 3554 1.754226 GAAGTCCTGGCAAAACAACCA 59.246 47.619 0.00 0.00 0.00 3.67
2812 3555 2.031870 AGAAGTCCTGGCAAAACAACC 58.968 47.619 0.00 0.00 0.00 3.77
2813 3556 2.034685 GGAGAAGTCCTGGCAAAACAAC 59.965 50.000 0.00 0.00 40.17 3.32
2814 3557 2.306847 GGAGAAGTCCTGGCAAAACAA 58.693 47.619 0.00 0.00 40.17 2.83
2815 3558 1.478654 GGGAGAAGTCCTGGCAAAACA 60.479 52.381 0.00 0.00 43.36 2.83
3557 4305 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
3559 4307 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
3561 4309 7.048512 AGAAAGACTTATATTTGGGAACGGAG 58.951 38.462 0.00 0.00 0.00 4.63
3562 4310 6.954232 AGAAAGACTTATATTTGGGAACGGA 58.046 36.000 0.00 0.00 0.00 4.69
3575 4323 9.796120 CTCGTTGAAATCTCTAGAAAGACTTAT 57.204 33.333 0.00 0.00 0.00 1.73
3576 4324 8.794553 ACTCGTTGAAATCTCTAGAAAGACTTA 58.205 33.333 0.00 0.00 0.00 2.24
3577 4325 7.596995 CACTCGTTGAAATCTCTAGAAAGACTT 59.403 37.037 0.00 0.00 0.00 3.01
3578 4326 7.040340 TCACTCGTTGAAATCTCTAGAAAGACT 60.040 37.037 0.00 0.00 0.00 3.24
3579 4327 7.061326 GTCACTCGTTGAAATCTCTAGAAAGAC 59.939 40.741 0.00 0.00 35.39 3.01
3580 4328 7.040340 AGTCACTCGTTGAAATCTCTAGAAAGA 60.040 37.037 0.00 0.00 35.39 2.52
3581 4329 7.087639 AGTCACTCGTTGAAATCTCTAGAAAG 58.912 38.462 0.00 0.00 35.39 2.62
3582 4330 6.982852 AGTCACTCGTTGAAATCTCTAGAAA 58.017 36.000 0.00 0.00 35.39 2.52
3583 4331 6.576662 AGTCACTCGTTGAAATCTCTAGAA 57.423 37.500 0.00 0.00 35.39 2.10
3584 4332 6.653740 TGTAGTCACTCGTTGAAATCTCTAGA 59.346 38.462 0.00 0.00 35.39 2.43
3585 4333 6.843208 TGTAGTCACTCGTTGAAATCTCTAG 58.157 40.000 0.00 0.00 35.39 2.43
3586 4334 6.812879 TGTAGTCACTCGTTGAAATCTCTA 57.187 37.500 0.00 0.00 35.39 2.43
3587 4335 5.707242 TGTAGTCACTCGTTGAAATCTCT 57.293 39.130 0.00 0.00 35.39 3.10
3588 4336 6.194876 CGTATGTAGTCACTCGTTGAAATCTC 59.805 42.308 0.00 0.00 35.39 2.75
3589 4337 6.028368 CGTATGTAGTCACTCGTTGAAATCT 58.972 40.000 0.00 0.00 35.39 2.40
3590 4338 5.229469 CCGTATGTAGTCACTCGTTGAAATC 59.771 44.000 0.00 0.00 35.39 2.17
3591 4339 5.100259 CCGTATGTAGTCACTCGTTGAAAT 58.900 41.667 0.00 0.00 35.39 2.17
3592 4340 4.216042 TCCGTATGTAGTCACTCGTTGAAA 59.784 41.667 0.00 0.00 35.39 2.69
3593 4341 3.752747 TCCGTATGTAGTCACTCGTTGAA 59.247 43.478 0.00 0.00 35.39 2.69
3594 4342 3.337358 TCCGTATGTAGTCACTCGTTGA 58.663 45.455 0.00 0.00 0.00 3.18
3595 4343 3.681855 CTCCGTATGTAGTCACTCGTTG 58.318 50.000 0.00 0.00 0.00 4.10
3596 4344 2.097142 GCTCCGTATGTAGTCACTCGTT 59.903 50.000 0.00 0.00 0.00 3.85
3597 4345 1.669779 GCTCCGTATGTAGTCACTCGT 59.330 52.381 0.00 0.00 0.00 4.18
3598 4346 1.669265 TGCTCCGTATGTAGTCACTCG 59.331 52.381 0.00 0.00 0.00 4.18
3599 4347 3.777465 TTGCTCCGTATGTAGTCACTC 57.223 47.619 0.00 0.00 0.00 3.51
3600 4348 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3601 4349 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3602 4350 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3603 4351 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3604 4352 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3605 4353 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3606 4354 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3607 4355 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3608 4356 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3609 4357 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3610 4358 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3611 4359 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3612 4360 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3613 4361 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3614 4362 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3625 4373 6.870965 AGACATGTTTGAGAGTGTAGATTCAC 59.129 38.462 0.00 0.00 38.46 3.18
3626 4374 6.997655 AGACATGTTTGAGAGTGTAGATTCA 58.002 36.000 0.00 0.00 0.00 2.57
3627 4375 8.029522 TGTAGACATGTTTGAGAGTGTAGATTC 58.970 37.037 0.00 0.00 0.00 2.52
3628 4376 7.896811 TGTAGACATGTTTGAGAGTGTAGATT 58.103 34.615 0.00 0.00 0.00 2.40
3629 4377 7.468141 TGTAGACATGTTTGAGAGTGTAGAT 57.532 36.000 0.00 0.00 0.00 1.98
3630 4378 6.894339 TGTAGACATGTTTGAGAGTGTAGA 57.106 37.500 0.00 0.00 0.00 2.59
3631 4379 8.244113 TGTATGTAGACATGTTTGAGAGTGTAG 58.756 37.037 0.00 0.00 37.15 2.74
3632 4380 8.117813 TGTATGTAGACATGTTTGAGAGTGTA 57.882 34.615 0.00 0.00 37.15 2.90
3633 4381 6.993079 TGTATGTAGACATGTTTGAGAGTGT 58.007 36.000 0.00 0.00 37.15 3.55
3634 4382 7.223582 GGATGTATGTAGACATGTTTGAGAGTG 59.776 40.741 0.00 0.00 40.18 3.51
3635 4383 7.268586 GGATGTATGTAGACATGTTTGAGAGT 58.731 38.462 0.00 0.00 40.18 3.24
3636 4384 6.419116 CGGATGTATGTAGACATGTTTGAGAG 59.581 42.308 0.00 0.00 40.18 3.20
3637 4385 6.127451 ACGGATGTATGTAGACATGTTTGAGA 60.127 38.462 0.00 0.00 40.18 3.27
3638 4386 6.042777 ACGGATGTATGTAGACATGTTTGAG 58.957 40.000 0.00 0.00 40.18 3.02
3639 4387 5.972935 ACGGATGTATGTAGACATGTTTGA 58.027 37.500 0.00 0.00 40.18 2.69
3640 4388 7.946655 ATACGGATGTATGTAGACATGTTTG 57.053 36.000 0.00 0.00 40.18 2.93
3642 4390 9.639601 CAATATACGGATGTATGTAGACATGTT 57.360 33.333 0.00 0.00 41.37 2.71
3643 4391 8.803235 ACAATATACGGATGTATGTAGACATGT 58.197 33.333 0.00 0.00 41.37 3.21
3646 4394 9.511272 ACTACAATATACGGATGTATGTAGACA 57.489 33.333 24.44 0.00 40.69 3.41
3647 4395 9.985318 GACTACAATATACGGATGTATGTAGAC 57.015 37.037 24.44 18.37 40.69 2.59
3648 4396 9.170734 GGACTACAATATACGGATGTATGTAGA 57.829 37.037 24.44 2.20 40.69 2.59
3649 4397 8.953313 TGGACTACAATATACGGATGTATGTAG 58.047 37.037 19.56 19.56 42.27 2.74
3650 4398 8.866970 TGGACTACAATATACGGATGTATGTA 57.133 34.615 0.00 0.00 41.37 2.29
3651 4399 7.770366 TGGACTACAATATACGGATGTATGT 57.230 36.000 0.00 0.00 41.37 2.29
3652 4400 9.653287 AAATGGACTACAATATACGGATGTATG 57.347 33.333 0.00 0.00 41.37 2.39
3653 4401 9.653287 CAAATGGACTACAATATACGGATGTAT 57.347 33.333 0.00 0.00 43.62 2.29
3654 4402 8.862085 TCAAATGGACTACAATATACGGATGTA 58.138 33.333 0.00 0.00 34.45 2.29
3655 4403 7.732025 TCAAATGGACTACAATATACGGATGT 58.268 34.615 0.00 0.00 0.00 3.06
3656 4404 8.601845 TTCAAATGGACTACAATATACGGATG 57.398 34.615 0.00 0.00 0.00 3.51
3657 4405 9.793259 ATTTCAAATGGACTACAATATACGGAT 57.207 29.630 0.00 0.00 0.00 4.18
3658 4406 9.051679 CATTTCAAATGGACTACAATATACGGA 57.948 33.333 1.73 0.00 0.00 4.69
3659 4407 8.836413 ACATTTCAAATGGACTACAATATACGG 58.164 33.333 14.70 0.00 0.00 4.02
3660 4408 9.864034 GACATTTCAAATGGACTACAATATACG 57.136 33.333 14.70 0.00 0.00 3.06
3670 4418 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
3671 4419 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
3687 4435 7.279758 TCCGTTCGTTCCTAAAAAGTCTTTTTA 59.720 33.333 23.00 23.00 42.43 1.52
3688 4436 6.093909 TCCGTTCGTTCCTAAAAAGTCTTTTT 59.906 34.615 23.21 23.21 44.43 1.94
3689 4437 5.585844 TCCGTTCGTTCCTAAAAAGTCTTTT 59.414 36.000 4.66 4.66 38.34 2.27
3690 4438 5.118286 TCCGTTCGTTCCTAAAAAGTCTTT 58.882 37.500 0.00 0.00 0.00 2.52
3691 4439 4.696455 TCCGTTCGTTCCTAAAAAGTCTT 58.304 39.130 0.00 0.00 0.00 3.01
3692 4440 4.202192 ACTCCGTTCGTTCCTAAAAAGTCT 60.202 41.667 0.00 0.00 0.00 3.24
3693 4441 4.053983 ACTCCGTTCGTTCCTAAAAAGTC 58.946 43.478 0.00 0.00 0.00 3.01
3694 4442 4.063998 ACTCCGTTCGTTCCTAAAAAGT 57.936 40.909 0.00 0.00 0.00 2.66
3695 4443 5.225642 ACTACTCCGTTCGTTCCTAAAAAG 58.774 41.667 0.00 0.00 0.00 2.27
3696 4444 5.200368 ACTACTCCGTTCGTTCCTAAAAA 57.800 39.130 0.00 0.00 0.00 1.94
3697 4445 4.853924 ACTACTCCGTTCGTTCCTAAAA 57.146 40.909 0.00 0.00 0.00 1.52
3698 4446 5.003804 AGTACTACTCCGTTCGTTCCTAAA 58.996 41.667 0.00 0.00 0.00 1.85
3699 4447 4.579869 AGTACTACTCCGTTCGTTCCTAA 58.420 43.478 0.00 0.00 0.00 2.69
3700 4448 4.184629 GAGTACTACTCCGTTCGTTCCTA 58.815 47.826 5.01 0.00 39.28 2.94
3701 4449 3.006247 GAGTACTACTCCGTTCGTTCCT 58.994 50.000 5.01 0.00 39.28 3.36
3702 4450 3.397405 GAGTACTACTCCGTTCGTTCC 57.603 52.381 5.01 0.00 39.28 3.62
3717 4465 7.417570 CATATTAATATGGACCGGAGGGAGTAC 60.418 44.444 22.73 0.00 43.82 2.73
3741 4489 1.938069 AGGTACTCCCCTACAGTCCAT 59.062 52.381 0.00 0.00 31.31 3.41
3742 4490 1.006758 CAGGTACTCCCCTACAGTCCA 59.993 57.143 0.00 0.00 34.60 4.02
3743 4491 1.777941 CAGGTACTCCCCTACAGTCC 58.222 60.000 0.00 0.00 34.60 3.85
3744 4492 1.112950 GCAGGTACTCCCCTACAGTC 58.887 60.000 0.00 0.00 34.60 3.51
3745 4493 0.711184 AGCAGGTACTCCCCTACAGT 59.289 55.000 0.00 0.00 34.60 3.55
3749 4497 2.868964 AATCAGCAGGTACTCCCCTA 57.131 50.000 0.00 0.00 34.60 3.53
3750 4498 1.972588 AAATCAGCAGGTACTCCCCT 58.027 50.000 0.00 0.00 34.60 4.79
3751 4499 2.290960 ACAAAATCAGCAGGTACTCCCC 60.291 50.000 0.00 0.00 34.60 4.81
3752 4500 3.073274 ACAAAATCAGCAGGTACTCCC 57.927 47.619 0.00 0.00 34.60 4.30
3759 4549 8.650714 GCTTATTTTTCTTACAAAATCAGCAGG 58.349 33.333 15.37 0.00 45.05 4.85
3786 4576 4.458256 TCCAAATGGAGATACATGGCAT 57.542 40.909 0.00 0.00 39.78 4.40
4074 4864 7.015195 TGGCATGAGAGTACTAAGTATAATGCA 59.985 37.037 17.50 0.00 38.69 3.96
4342 5296 7.572759 ACAGTACAACATTAGAACAATTGTCG 58.427 34.615 12.39 0.00 35.26 4.35
4586 5620 2.227388 GCACAGGAAGGTTCATGAACAG 59.773 50.000 33.42 19.58 41.15 3.16
4660 5698 9.691362 GTTAAAAGGCAAAATGAATAGACTGAA 57.309 29.630 0.00 0.00 0.00 3.02
5678 6749 6.494491 ACTTCAAAAATCATCCAACCTCATGA 59.506 34.615 0.00 0.00 33.55 3.07
6135 7634 2.039746 CCACCATTCCACCAGTAAGTCA 59.960 50.000 0.00 0.00 0.00 3.41
6136 7635 2.618045 CCCACCATTCCACCAGTAAGTC 60.618 54.545 0.00 0.00 0.00 3.01
6149 7648 7.896496 TGGAGTTGTTAATAATTACCCACCATT 59.104 33.333 0.00 0.00 0.00 3.16
6249 7749 2.619646 GTTCAAGGTTTACCGAGGCAAA 59.380 45.455 0.00 0.00 42.08 3.68
6250 7750 2.223745 GTTCAAGGTTTACCGAGGCAA 58.776 47.619 0.00 0.00 42.08 4.52
6414 7914 0.396435 TTCTGTGTCCGCACCAGATT 59.604 50.000 0.00 0.00 44.65 2.40
6415 7915 0.615331 ATTCTGTGTCCGCACCAGAT 59.385 50.000 0.00 0.00 44.65 2.90
6416 7916 0.396435 AATTCTGTGTCCGCACCAGA 59.604 50.000 0.00 0.00 44.65 3.86
6417 7917 1.238439 AAATTCTGTGTCCGCACCAG 58.762 50.000 0.00 0.00 44.65 4.00
6418 7918 1.336440 CAAAATTCTGTGTCCGCACCA 59.664 47.619 0.00 0.00 44.65 4.17
6419 7919 1.606668 TCAAAATTCTGTGTCCGCACC 59.393 47.619 0.00 0.00 44.65 5.01
6421 7921 4.759693 ACTTATCAAAATTCTGTGTCCGCA 59.240 37.500 0.00 0.00 0.00 5.69
6422 7922 5.296813 ACTTATCAAAATTCTGTGTCCGC 57.703 39.130 0.00 0.00 0.00 5.54
6435 7935 8.231837 GCGTTGTTCCAGTTTATACTTATCAAA 58.768 33.333 0.00 0.00 30.26 2.69
6436 7936 7.388224 TGCGTTGTTCCAGTTTATACTTATCAA 59.612 33.333 0.00 0.00 30.26 2.57
6438 7938 7.298507 TGCGTTGTTCCAGTTTATACTTATC 57.701 36.000 0.00 0.00 30.26 1.75
6439 7939 7.675962 TTGCGTTGTTCCAGTTTATACTTAT 57.324 32.000 0.00 0.00 30.26 1.73
6440 7940 7.173562 ACATTGCGTTGTTCCAGTTTATACTTA 59.826 33.333 0.00 0.00 30.26 2.24
6441 7941 6.016610 ACATTGCGTTGTTCCAGTTTATACTT 60.017 34.615 0.00 0.00 30.26 2.24
6442 7942 5.472137 ACATTGCGTTGTTCCAGTTTATACT 59.528 36.000 0.00 0.00 34.00 2.12
6443 7943 5.695818 ACATTGCGTTGTTCCAGTTTATAC 58.304 37.500 0.00 0.00 0.00 1.47
6444 7944 5.950758 ACATTGCGTTGTTCCAGTTTATA 57.049 34.783 0.00 0.00 0.00 0.98
6446 7946 4.640789 AACATTGCGTTGTTCCAGTTTA 57.359 36.364 0.00 0.00 34.83 2.01
6652 8162 6.127479 TGTCTGTTACCTTGAAACTTTTGCAT 60.127 34.615 0.00 0.00 0.00 3.96
6727 8652 3.889196 TCAGTGTGATAACAAAACGCC 57.111 42.857 0.00 0.00 0.00 5.68
6894 8823 3.230976 TGGATACATACTGGTCGCAGAT 58.769 45.455 0.00 0.00 46.17 2.90
7184 12983 4.656041 CAGTCAAAGAATCGCTTCAATCC 58.344 43.478 1.35 0.00 35.24 3.01
7297 13097 3.074390 TGCAAGATGGAGAAGAAAAGGGA 59.926 43.478 0.00 0.00 0.00 4.20
7330 13134 6.489675 ACAAAAGATAACATTCATAGCAGCG 58.510 36.000 0.00 0.00 0.00 5.18
7356 13160 9.832445 GAATAATAGTCCCAGAATTACACTTGA 57.168 33.333 0.00 0.00 0.00 3.02
7395 13199 7.529158 CAATGAAAGATTGTACATGCTACACA 58.471 34.615 0.00 0.10 0.00 3.72
7403 13207 5.184479 AGCACTGCAATGAAAGATTGTACAT 59.816 36.000 0.00 0.00 0.00 2.29
7478 13298 3.323136 GATCAGCCGTGTAGCGCG 61.323 66.667 0.00 0.00 39.71 6.86
7479 13299 1.084370 AAAGATCAGCCGTGTAGCGC 61.084 55.000 0.00 0.00 39.71 5.92
7480 13300 1.061131 CAAAAGATCAGCCGTGTAGCG 59.939 52.381 0.00 0.00 38.01 4.26
7528 13422 2.094894 ACGATACGACTCCAACACGTAG 59.905 50.000 0.00 0.00 43.66 3.51
7547 13441 3.631227 AGACTCGGATCCTAACCTTAACG 59.369 47.826 10.75 0.00 0.00 3.18
7551 13446 7.201983 GGTTTATAAGACTCGGATCCTAACCTT 60.202 40.741 10.75 10.27 0.00 3.50
7553 13448 6.453943 GGTTTATAAGACTCGGATCCTAACC 58.546 44.000 10.75 0.00 0.00 2.85
7566 13461 3.736126 CGTCCTGTCGGGGTTTATAAGAC 60.736 52.174 0.00 0.00 35.33 3.01
7567 13462 2.428171 CGTCCTGTCGGGGTTTATAAGA 59.572 50.000 0.00 0.00 35.33 2.10
7568 13463 2.428171 TCGTCCTGTCGGGGTTTATAAG 59.572 50.000 0.00 0.00 35.33 1.73
7569 13464 2.428171 CTCGTCCTGTCGGGGTTTATAA 59.572 50.000 0.00 0.00 35.33 0.98
7570 13465 2.026641 CTCGTCCTGTCGGGGTTTATA 58.973 52.381 0.00 0.00 35.33 0.98
7571 13466 0.822164 CTCGTCCTGTCGGGGTTTAT 59.178 55.000 0.00 0.00 35.33 1.40
7572 13467 0.251297 TCTCGTCCTGTCGGGGTTTA 60.251 55.000 0.00 0.00 35.33 2.01
7573 13468 1.532316 TCTCGTCCTGTCGGGGTTT 60.532 57.895 0.00 0.00 35.33 3.27
7574 13469 2.116772 TCTCGTCCTGTCGGGGTT 59.883 61.111 0.00 0.00 35.33 4.11
7576 13471 1.812686 TTTGTCTCGTCCTGTCGGGG 61.813 60.000 0.00 0.00 35.33 5.73
7578 13473 2.933495 TATTTGTCTCGTCCTGTCGG 57.067 50.000 0.00 0.00 0.00 4.79
7579 13474 6.129431 CGATTATTATTTGTCTCGTCCTGTCG 60.129 42.308 0.00 0.00 0.00 4.35
7580 13475 6.916387 TCGATTATTATTTGTCTCGTCCTGTC 59.084 38.462 0.00 0.00 0.00 3.51
7581 13476 6.802608 TCGATTATTATTTGTCTCGTCCTGT 58.197 36.000 0.00 0.00 0.00 4.00
7582 13477 7.810282 AGATCGATTATTATTTGTCTCGTCCTG 59.190 37.037 0.00 0.00 0.00 3.86
7583 13478 7.810282 CAGATCGATTATTATTTGTCTCGTCCT 59.190 37.037 0.00 0.00 0.00 3.85
7584 13479 7.062371 CCAGATCGATTATTATTTGTCTCGTCC 59.938 40.741 0.00 0.00 0.00 4.79
7585 13480 7.595502 ACCAGATCGATTATTATTTGTCTCGTC 59.404 37.037 0.00 0.00 0.00 4.20
7587 13482 7.875316 ACCAGATCGATTATTATTTGTCTCG 57.125 36.000 0.00 0.00 0.00 4.04
7588 13483 8.012241 GCAACCAGATCGATTATTATTTGTCTC 58.988 37.037 0.00 0.00 0.00 3.36
7590 13485 6.792250 CGCAACCAGATCGATTATTATTTGTC 59.208 38.462 0.00 0.00 0.00 3.18
7592 13487 6.574832 CACGCAACCAGATCGATTATTATTTG 59.425 38.462 0.00 0.58 0.00 2.32
7593 13488 6.658831 CACGCAACCAGATCGATTATTATTT 58.341 36.000 0.00 0.00 0.00 1.40
7596 13491 3.493129 GCACGCAACCAGATCGATTATTA 59.507 43.478 0.00 0.00 0.00 0.98
7598 13493 1.867233 GCACGCAACCAGATCGATTAT 59.133 47.619 0.00 0.00 0.00 1.28
7599 13494 1.286501 GCACGCAACCAGATCGATTA 58.713 50.000 0.00 0.00 0.00 1.75
7600 13495 0.673333 TGCACGCAACCAGATCGATT 60.673 50.000 0.00 0.00 0.00 3.34
7601 13496 0.673333 TTGCACGCAACCAGATCGAT 60.673 50.000 0.00 0.00 0.00 3.59
7602 13497 0.882484 TTTGCACGCAACCAGATCGA 60.882 50.000 3.45 0.00 35.46 3.59
7603 13498 0.168788 ATTTGCACGCAACCAGATCG 59.831 50.000 3.45 0.00 35.46 3.69
7606 13501 0.882484 TCGATTTGCACGCAACCAGA 60.882 50.000 3.45 1.39 35.46 3.86
7607 13502 0.453282 CTCGATTTGCACGCAACCAG 60.453 55.000 3.45 0.00 35.46 4.00
7608 13503 1.573932 CTCGATTTGCACGCAACCA 59.426 52.632 3.45 0.00 35.46 3.67
7611 13506 1.207339 CTGCTCGATTTGCACGCAA 59.793 52.632 0.00 0.00 36.37 4.85
7612 13507 2.862436 CTGCTCGATTTGCACGCA 59.138 55.556 0.00 0.00 36.37 5.24
7613 13508 2.575262 GCTGCTCGATTTGCACGC 60.575 61.111 0.00 0.00 36.37 5.34
7614 13509 2.099062 GGCTGCTCGATTTGCACG 59.901 61.111 0.00 0.00 36.37 5.34
7615 13510 2.099062 CGGCTGCTCGATTTGCAC 59.901 61.111 0.00 0.00 36.37 4.57
7616 13511 2.358615 ACGGCTGCTCGATTTGCA 60.359 55.556 15.53 0.00 38.81 4.08
7618 13513 2.034879 ACCACGGCTGCTCGATTTG 61.035 57.895 15.53 5.44 0.00 2.32
7619 13514 2.034879 CACCACGGCTGCTCGATTT 61.035 57.895 15.53 0.00 0.00 2.17
7620 13515 1.884075 TACACCACGGCTGCTCGATT 61.884 55.000 15.53 0.00 0.00 3.34
7621 13516 2.348104 TACACCACGGCTGCTCGAT 61.348 57.895 15.53 0.29 0.00 3.59
7622 13517 2.986979 TACACCACGGCTGCTCGA 60.987 61.111 15.53 0.00 0.00 4.04
7623 13518 2.809601 GTACACCACGGCTGCTCG 60.810 66.667 0.00 4.21 0.00 5.03
7632 13527 0.986992 GATACACGCACGTACACCAC 59.013 55.000 0.00 0.00 0.00 4.16
7633 13528 0.883153 AGATACACGCACGTACACCA 59.117 50.000 0.00 0.00 0.00 4.17
7635 13530 1.177668 CGAGATACACGCACGTACAC 58.822 55.000 0.00 0.00 0.00 2.90
7636 13531 3.591442 CGAGATACACGCACGTACA 57.409 52.632 0.00 0.00 0.00 2.90
7644 13539 2.025727 GGTCCGGCGAGATACACG 59.974 66.667 9.30 0.00 0.00 4.49
7645 13540 1.065928 CTGGTCCGGCGAGATACAC 59.934 63.158 9.30 0.00 0.00 2.90
7646 13541 1.379443 ACTGGTCCGGCGAGATACA 60.379 57.895 9.30 6.97 0.00 2.29
7647 13542 1.359475 GACTGGTCCGGCGAGATAC 59.641 63.158 9.30 0.27 0.00 2.24
7648 13543 0.467474 ATGACTGGTCCGGCGAGATA 60.467 55.000 9.30 0.00 0.00 1.98
7649 13544 1.739338 GATGACTGGTCCGGCGAGAT 61.739 60.000 9.30 0.00 0.00 2.75
7650 13545 2.362503 ATGACTGGTCCGGCGAGA 60.363 61.111 9.30 0.12 0.00 4.04
7651 13546 2.105128 GATGACTGGTCCGGCGAG 59.895 66.667 9.30 0.00 0.00 5.03
7653 13548 1.361668 CTTTGATGACTGGTCCGGCG 61.362 60.000 0.00 0.00 0.00 6.46
7654 13549 1.648467 GCTTTGATGACTGGTCCGGC 61.648 60.000 0.00 0.00 0.00 6.13
7655 13550 0.036010 AGCTTTGATGACTGGTCCGG 60.036 55.000 0.00 0.00 0.00 5.14
7656 13551 1.466167 CAAGCTTTGATGACTGGTCCG 59.534 52.381 0.00 0.00 0.00 4.79
7657 13552 1.200948 GCAAGCTTTGATGACTGGTCC 59.799 52.381 0.00 0.00 0.00 4.46
7658 13553 2.157738 AGCAAGCTTTGATGACTGGTC 58.842 47.619 0.00 0.00 0.00 4.02
7659 13554 2.283145 AGCAAGCTTTGATGACTGGT 57.717 45.000 0.00 0.00 0.00 4.00
7660 13555 3.655276 AAAGCAAGCTTTGATGACTGG 57.345 42.857 18.36 0.00 43.72 4.00
7671 13566 0.536006 ACGAGGAAGCAAAGCAAGCT 60.536 50.000 0.00 0.00 45.97 3.74
7672 13567 0.110010 GACGAGGAAGCAAAGCAAGC 60.110 55.000 0.00 0.00 0.00 4.01
7673 13568 0.164647 CGACGAGGAAGCAAAGCAAG 59.835 55.000 0.00 0.00 0.00 4.01
7674 13569 0.531974 ACGACGAGGAAGCAAAGCAA 60.532 50.000 0.00 0.00 0.00 3.91
7675 13570 0.944311 GACGACGAGGAAGCAAAGCA 60.944 55.000 0.00 0.00 0.00 3.91
7681 14839 2.717809 GCAACGACGACGAGGAAGC 61.718 63.158 15.32 6.38 42.66 3.86
7714 14872 4.603535 ACCCACAGTTGGCCCAGC 62.604 66.667 0.00 0.00 42.35 4.85
7715 14873 2.598394 CACCCACAGTTGGCCCAG 60.598 66.667 0.00 0.00 42.35 4.45
7716 14874 4.217210 CCACCCACAGTTGGCCCA 62.217 66.667 0.00 0.00 42.35 5.36
7719 14877 1.978617 CATCCCACCCACAGTTGGC 60.979 63.158 0.00 0.00 42.35 4.52
7720 14878 1.304381 CCATCCCACCCACAGTTGG 60.304 63.158 0.00 0.00 43.50 3.77
7721 14879 1.304381 CCCATCCCACCCACAGTTG 60.304 63.158 0.00 0.00 0.00 3.16
7722 14880 1.071314 TTCCCATCCCACCCACAGTT 61.071 55.000 0.00 0.00 0.00 3.16
7723 14881 0.850883 ATTCCCATCCCACCCACAGT 60.851 55.000 0.00 0.00 0.00 3.55
7724 14882 0.396139 CATTCCCATCCCACCCACAG 60.396 60.000 0.00 0.00 0.00 3.66
7725 14883 1.696686 CATTCCCATCCCACCCACA 59.303 57.895 0.00 0.00 0.00 4.17
7726 14884 1.758122 GCATTCCCATCCCACCCAC 60.758 63.158 0.00 0.00 0.00 4.61
7728 14886 1.360393 TAGGCATTCCCATCCCACCC 61.360 60.000 0.00 0.00 35.39 4.61
7729 14887 0.779997 ATAGGCATTCCCATCCCACC 59.220 55.000 0.00 0.00 35.39 4.61
7730 14888 1.915141 CATAGGCATTCCCATCCCAC 58.085 55.000 0.00 0.00 35.39 4.61
7731 14889 0.112995 GCATAGGCATTCCCATCCCA 59.887 55.000 0.00 0.00 40.72 4.37
7732 14890 2.967270 GCATAGGCATTCCCATCCC 58.033 57.895 0.00 0.00 40.72 3.85
7769 14927 1.126421 CGTCATCTTCGTGACCGTCG 61.126 60.000 1.84 0.00 44.37 5.12
7771 14929 1.443872 GCGTCATCTTCGTGACCGT 60.444 57.895 1.84 0.00 44.37 4.83
7774 14932 2.789203 GCGGCGTCATCTTCGTGAC 61.789 63.158 9.37 0.00 43.90 3.67
7776 14934 3.554692 GGCGGCGTCATCTTCGTG 61.555 66.667 6.63 0.00 0.00 4.35
7795 14953 3.197790 CATCTTCGTGGCCGGCAG 61.198 66.667 30.85 17.05 33.95 4.85
7796 14954 3.247056 TTCATCTTCGTGGCCGGCA 62.247 57.895 30.85 12.04 33.95 5.69
7797 14955 2.435938 TTCATCTTCGTGGCCGGC 60.436 61.111 21.18 21.18 33.95 6.13
7798 14956 0.179073 ATCTTCATCTTCGTGGCCGG 60.179 55.000 0.00 0.00 33.95 6.13
7799 14957 1.212616 GATCTTCATCTTCGTGGCCG 58.787 55.000 0.00 0.00 0.00 6.13
7800 14958 1.936547 GTGATCTTCATCTTCGTGGCC 59.063 52.381 0.00 0.00 0.00 5.36
7801 14959 1.590238 CGTGATCTTCATCTTCGTGGC 59.410 52.381 0.00 0.00 0.00 5.01
7802 14960 2.854777 GACGTGATCTTCATCTTCGTGG 59.145 50.000 0.00 0.00 38.97 4.94
7803 14961 2.527887 CGACGTGATCTTCATCTTCGTG 59.472 50.000 0.00 0.00 38.97 4.35
7804 14962 2.786854 CGACGTGATCTTCATCTTCGT 58.213 47.619 0.00 0.00 40.34 3.85
7805 14963 1.514811 GCGACGTGATCTTCATCTTCG 59.485 52.381 0.00 0.00 35.09 3.79
7806 14964 1.855360 GGCGACGTGATCTTCATCTTC 59.145 52.381 0.00 0.00 0.00 2.87
7807 14965 1.927895 GGCGACGTGATCTTCATCTT 58.072 50.000 0.00 0.00 0.00 2.40
7808 14966 3.650409 GGCGACGTGATCTTCATCT 57.350 52.632 0.00 0.00 0.00 2.90
7845 15003 2.944557 CTCGATGTGGACGACGCG 60.945 66.667 3.53 3.53 35.88 6.01
7846 15004 1.868251 GTCTCGATGTGGACGACGC 60.868 63.158 0.00 0.00 35.88 5.19
7856 15014 2.249337 GCTCTATGATGCGTCTCGATG 58.751 52.381 7.58 0.00 0.00 3.84
7863 15021 0.455815 TGACGTGCTCTATGATGCGT 59.544 50.000 0.00 0.00 35.20 5.24
7872 15030 3.052081 GTCCTGGTGACGTGCTCT 58.948 61.111 0.00 0.00 33.49 4.09
7882 15043 1.006102 CGAAGCTGAACGTCCTGGT 60.006 57.895 0.00 0.00 0.00 4.00
7886 15047 1.009389 CACCTCGAAGCTGAACGTCC 61.009 60.000 0.00 0.00 0.00 4.79
7887 15048 0.039437 TCACCTCGAAGCTGAACGTC 60.039 55.000 0.00 0.00 0.00 4.34
7890 15051 0.033504 TGGTCACCTCGAAGCTGAAC 59.966 55.000 0.00 0.00 0.00 3.18
7892 15053 0.033504 GTTGGTCACCTCGAAGCTGA 59.966 55.000 0.00 0.00 0.00 4.26
7896 15057 1.893801 AGGTAGTTGGTCACCTCGAAG 59.106 52.381 0.00 0.00 41.44 3.79
7900 15061 0.685097 TGCAGGTAGTTGGTCACCTC 59.315 55.000 0.00 0.00 43.45 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.