Multiple sequence alignment - TraesCS2D01G472600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G472600 chr2D 100.000 4051 0 0 1 4051 576207576 576203526 0.000000e+00 7481.0
1 TraesCS2D01G472600 chr2D 93.011 186 10 1 3868 4050 232039365 232039550 6.670000e-68 268.0
2 TraesCS2D01G472600 chr2D 90.476 189 14 2 3866 4050 564348612 564348424 3.130000e-61 246.0
3 TraesCS2D01G472600 chr2A 91.293 2676 150 35 1250 3868 714228784 714226135 0.000000e+00 3574.0
4 TraesCS2D01G472600 chr2A 89.446 578 48 6 809 1374 714229302 714228726 0.000000e+00 717.0
5 TraesCS2D01G472600 chr2A 89.241 316 27 5 289 601 714229805 714229494 4.910000e-104 388.0
6 TraesCS2D01G472600 chr2A 91.064 235 18 2 585 819 714229482 714229251 8.450000e-82 315.0
7 TraesCS2D01G472600 chr2A 89.706 68 4 3 3388 3453 10409002 10408936 2.590000e-12 84.2
8 TraesCS2D01G472600 chr2B 91.207 2468 155 28 809 3237 692176471 692174027 0.000000e+00 3299.0
9 TraesCS2D01G472600 chr2B 89.850 532 43 6 289 818 692176943 692176421 0.000000e+00 673.0
10 TraesCS2D01G472600 chr2B 92.105 38 3 0 1644 1681 692175495 692175458 2.000000e-03 54.7
11 TraesCS2D01G472600 chr7A 91.892 185 12 1 3869 4050 149555327 149555143 5.200000e-64 255.0
12 TraesCS2D01G472600 chr5A 88.942 208 19 4 1 205 576580838 576581044 1.870000e-63 254.0
13 TraesCS2D01G472600 chr6D 91.351 185 13 1 3869 4050 385667680 385667496 2.420000e-62 250.0
14 TraesCS2D01G472600 chr6D 94.737 57 2 1 3394 3450 17267755 17267810 2.010000e-13 87.9
15 TraesCS2D01G472600 chr5D 91.351 185 13 1 3869 4050 448650164 448649980 2.420000e-62 250.0
16 TraesCS2D01G472600 chr5D 90.909 187 14 1 3867 4050 9030565 9030379 8.690000e-62 248.0
17 TraesCS2D01G472600 chr7D 91.304 184 13 1 3868 4048 572233869 572234052 8.690000e-62 248.0
18 TraesCS2D01G472600 chr7D 89.637 193 16 2 3861 4050 370432494 370432685 4.050000e-60 243.0
19 TraesCS2D01G472600 chr7D 96.364 55 2 0 3396 3450 180223903 180223957 1.550000e-14 91.6
20 TraesCS2D01G472600 chr3D 89.109 202 18 4 1 200 362059572 362059771 8.690000e-62 248.0
21 TraesCS2D01G472600 chr3D 92.593 162 10 2 1 160 476327348 476327187 8.760000e-57 231.0
22 TraesCS2D01G472600 chr1D 90.811 185 14 1 3869 4050 142517228 142517412 1.120000e-60 244.0
23 TraesCS2D01G472600 chr6A 92.547 161 10 2 1 159 15737531 15737371 3.150000e-56 230.0
24 TraesCS2D01G472600 chr4A 86.869 198 24 2 1 196 471711505 471711702 1.900000e-53 220.0
25 TraesCS2D01G472600 chr4A 89.041 73 6 2 3395 3466 632143668 632143597 5.580000e-14 89.8
26 TraesCS2D01G472600 chr3A 88.304 171 18 2 1 169 52405978 52405808 1.910000e-48 204.0
27 TraesCS2D01G472600 chr3B 80.085 236 37 7 315 549 31718744 31718970 2.500000e-37 167.0
28 TraesCS2D01G472600 chr1A 94.915 59 2 1 3395 3452 3811134 3811076 1.550000e-14 91.6
29 TraesCS2D01G472600 chr4B 93.443 61 2 2 3395 3453 459067619 459067679 5.580000e-14 89.8
30 TraesCS2D01G472600 chr4B 91.935 62 3 2 3393 3453 646867508 646867448 7.210000e-13 86.1
31 TraesCS2D01G472600 chr5B 88.889 72 6 2 3391 3461 679043978 679043908 2.010000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G472600 chr2D 576203526 576207576 4050 True 7481.000000 7481 100.000 1 4051 1 chr2D.!!$R2 4050
1 TraesCS2D01G472600 chr2A 714226135 714229805 3670 True 1248.500000 3574 90.261 289 3868 4 chr2A.!!$R2 3579
2 TraesCS2D01G472600 chr2B 692174027 692176943 2916 True 1342.233333 3299 91.054 289 3237 3 chr2B.!!$R1 2948

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
41 42 0.034059 GTCGCCATGAGTATCCCCAG 59.966 60.0 0.0 0.0 0.0 4.45 F
211 212 0.036306 GGTGGTGTTGGTAGGACTGG 59.964 60.0 0.0 0.0 0.0 4.00 F
214 215 0.036306 GGTGTTGGTAGGACTGGGTG 59.964 60.0 0.0 0.0 0.0 4.61 F
1574 1684 0.098200 TCGACACTCGAATACCAGCG 59.902 55.0 0.0 0.0 46.9 5.18 F
2148 2275 0.104620 AGGTGGTAAGTGACTGGGGT 60.105 55.0 0.0 0.0 0.0 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1961 2085 0.309922 CAAGGACGATCATGCATGGC 59.690 55.000 25.97 16.91 0.00 4.40 R
2101 2225 1.153989 TTGGGTGCCGGAATTTGGA 59.846 52.632 5.05 0.00 0.00 3.53 R
2171 2298 3.004171 TGGGACGCACACAACATTATAC 58.996 45.455 0.00 0.00 0.00 1.47 R
2577 2716 0.321653 TCCTTTTCCTCTTGCTCGGC 60.322 55.000 0.00 0.00 0.00 5.54 R
3951 4120 0.035534 AATGGCGCACCTACACATGA 60.036 50.000 10.83 0.00 36.63 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.151710 CCCCGGTCGCCATGAGTA 61.152 66.667 0.00 0.00 0.00 2.59
35 36 2.507854 CCCCGGTCGCCATGAGTAT 61.508 63.158 0.00 0.00 0.00 2.12
36 37 1.006102 CCCGGTCGCCATGAGTATC 60.006 63.158 0.00 0.00 0.00 2.24
37 38 1.006102 CCGGTCGCCATGAGTATCC 60.006 63.158 0.00 0.00 0.00 2.59
38 39 1.006102 CGGTCGCCATGAGTATCCC 60.006 63.158 0.00 0.00 0.00 3.85
39 40 1.371558 GGTCGCCATGAGTATCCCC 59.628 63.158 0.00 0.00 0.00 4.81
40 41 1.407656 GGTCGCCATGAGTATCCCCA 61.408 60.000 0.00 0.00 0.00 4.96
41 42 0.034059 GTCGCCATGAGTATCCCCAG 59.966 60.000 0.00 0.00 0.00 4.45
42 43 1.302033 CGCCATGAGTATCCCCAGC 60.302 63.158 0.00 0.00 0.00 4.85
43 44 1.302033 GCCATGAGTATCCCCAGCG 60.302 63.158 0.00 0.00 0.00 5.18
44 45 1.372683 CCATGAGTATCCCCAGCGG 59.627 63.158 0.00 0.00 0.00 5.52
46 47 0.758734 CATGAGTATCCCCAGCGGAA 59.241 55.000 0.00 0.00 46.47 4.30
47 48 0.759346 ATGAGTATCCCCAGCGGAAC 59.241 55.000 0.00 0.00 46.47 3.62
48 49 0.325296 TGAGTATCCCCAGCGGAACT 60.325 55.000 0.00 0.00 46.47 3.01
49 50 0.105039 GAGTATCCCCAGCGGAACTG 59.895 60.000 0.00 0.00 46.47 3.16
57 58 3.056628 CAGCGGAACTGGTGAGATC 57.943 57.895 6.97 0.00 43.19 2.75
58 59 0.247460 CAGCGGAACTGGTGAGATCA 59.753 55.000 6.97 0.00 43.19 2.92
59 60 0.534412 AGCGGAACTGGTGAGATCAG 59.466 55.000 0.00 0.00 38.16 2.90
60 61 0.247736 GCGGAACTGGTGAGATCAGT 59.752 55.000 0.00 0.00 46.22 3.41
61 62 1.737363 GCGGAACTGGTGAGATCAGTC 60.737 57.143 0.00 0.00 43.82 3.51
62 63 1.821753 CGGAACTGGTGAGATCAGTCT 59.178 52.381 0.00 0.00 43.82 3.24
73 74 2.305928 AGATCAGTCTCACCATCTCCG 58.694 52.381 0.00 0.00 0.00 4.63
74 75 1.339610 GATCAGTCTCACCATCTCCGG 59.660 57.143 0.00 0.00 0.00 5.14
75 76 0.684479 TCAGTCTCACCATCTCCGGG 60.684 60.000 0.00 0.00 0.00 5.73
76 77 0.684479 CAGTCTCACCATCTCCGGGA 60.684 60.000 0.00 0.00 0.00 5.14
77 78 0.041238 AGTCTCACCATCTCCGGGAA 59.959 55.000 0.00 0.00 0.00 3.97
78 79 0.461961 GTCTCACCATCTCCGGGAAG 59.538 60.000 0.00 0.00 0.00 3.46
79 80 0.687757 TCTCACCATCTCCGGGAAGG 60.688 60.000 0.00 7.15 38.64 3.46
80 81 0.978146 CTCACCATCTCCGGGAAGGT 60.978 60.000 12.38 12.38 45.67 3.50
81 82 0.546747 TCACCATCTCCGGGAAGGTT 60.547 55.000 14.72 1.91 42.63 3.50
82 83 0.328258 CACCATCTCCGGGAAGGTTT 59.672 55.000 14.72 0.00 42.63 3.27
83 84 0.618981 ACCATCTCCGGGAAGGTTTC 59.381 55.000 12.38 0.00 42.63 2.78
84 85 0.462047 CCATCTCCGGGAAGGTTTCG 60.462 60.000 0.00 0.00 41.99 3.46
85 86 0.535335 CATCTCCGGGAAGGTTTCGA 59.465 55.000 0.00 0.00 41.99 3.71
86 87 0.824759 ATCTCCGGGAAGGTTTCGAG 59.175 55.000 0.00 0.00 41.99 4.04
87 88 1.218316 CTCCGGGAAGGTTTCGAGG 59.782 63.158 0.00 0.00 41.99 4.63
88 89 1.228956 TCCGGGAAGGTTTCGAGGA 60.229 57.895 0.00 1.47 41.99 3.71
89 90 0.616679 TCCGGGAAGGTTTCGAGGAT 60.617 55.000 0.00 0.00 41.99 3.24
90 91 0.462047 CCGGGAAGGTTTCGAGGATG 60.462 60.000 0.00 0.00 34.51 3.51
91 92 0.249398 CGGGAAGGTTTCGAGGATGT 59.751 55.000 0.00 0.00 0.00 3.06
92 93 1.739067 GGGAAGGTTTCGAGGATGTG 58.261 55.000 0.00 0.00 0.00 3.21
93 94 1.679032 GGGAAGGTTTCGAGGATGTGG 60.679 57.143 0.00 0.00 0.00 4.17
94 95 1.278127 GGAAGGTTTCGAGGATGTGGA 59.722 52.381 0.00 0.00 0.00 4.02
95 96 2.622436 GAAGGTTTCGAGGATGTGGAG 58.378 52.381 0.00 0.00 0.00 3.86
96 97 0.905357 AGGTTTCGAGGATGTGGAGG 59.095 55.000 0.00 0.00 0.00 4.30
97 98 0.107654 GGTTTCGAGGATGTGGAGGG 60.108 60.000 0.00 0.00 0.00 4.30
98 99 0.107654 GTTTCGAGGATGTGGAGGGG 60.108 60.000 0.00 0.00 0.00 4.79
99 100 1.910580 TTTCGAGGATGTGGAGGGGC 61.911 60.000 0.00 0.00 0.00 5.80
100 101 3.083349 CGAGGATGTGGAGGGGCA 61.083 66.667 0.00 0.00 0.00 5.36
101 102 2.914289 GAGGATGTGGAGGGGCAG 59.086 66.667 0.00 0.00 0.00 4.85
102 103 1.997874 GAGGATGTGGAGGGGCAGT 60.998 63.158 0.00 0.00 0.00 4.40
103 104 1.977293 GAGGATGTGGAGGGGCAGTC 61.977 65.000 0.00 0.00 0.00 3.51
104 105 2.187946 GATGTGGAGGGGCAGTCG 59.812 66.667 0.00 0.00 0.00 4.18
105 106 2.284625 ATGTGGAGGGGCAGTCGA 60.285 61.111 0.00 0.00 0.00 4.20
106 107 2.303549 GATGTGGAGGGGCAGTCGAG 62.304 65.000 0.00 0.00 0.00 4.04
107 108 3.775654 GTGGAGGGGCAGTCGAGG 61.776 72.222 0.00 0.00 0.00 4.63
108 109 3.992641 TGGAGGGGCAGTCGAGGA 61.993 66.667 0.00 0.00 0.00 3.71
109 110 3.151022 GGAGGGGCAGTCGAGGAG 61.151 72.222 0.00 0.00 0.00 3.69
110 111 3.151022 GAGGGGCAGTCGAGGAGG 61.151 72.222 0.00 0.00 0.00 4.30
111 112 4.787280 AGGGGCAGTCGAGGAGGG 62.787 72.222 0.00 0.00 0.00 4.30
113 114 4.779733 GGGCAGTCGAGGAGGGGA 62.780 72.222 0.00 0.00 0.00 4.81
114 115 2.683933 GGCAGTCGAGGAGGGGAA 60.684 66.667 0.00 0.00 0.00 3.97
115 116 2.726351 GGCAGTCGAGGAGGGGAAG 61.726 68.421 0.00 0.00 0.00 3.46
116 117 2.726351 GCAGTCGAGGAGGGGAAGG 61.726 68.421 0.00 0.00 0.00 3.46
117 118 2.060980 CAGTCGAGGAGGGGAAGGG 61.061 68.421 0.00 0.00 0.00 3.95
118 119 2.764547 GTCGAGGAGGGGAAGGGG 60.765 72.222 0.00 0.00 0.00 4.79
119 120 3.281787 TCGAGGAGGGGAAGGGGT 61.282 66.667 0.00 0.00 0.00 4.95
120 121 3.083997 CGAGGAGGGGAAGGGGTG 61.084 72.222 0.00 0.00 0.00 4.61
121 122 3.412408 GAGGAGGGGAAGGGGTGC 61.412 72.222 0.00 0.00 0.00 5.01
187 188 3.610669 CGGCTGGAGCGGCTAGAT 61.611 66.667 0.60 0.00 43.26 1.98
188 189 2.341911 GGCTGGAGCGGCTAGATC 59.658 66.667 0.60 0.00 43.26 2.75
189 190 2.206536 GGCTGGAGCGGCTAGATCT 61.207 63.158 0.60 0.00 43.26 2.75
190 191 1.006337 GCTGGAGCGGCTAGATCTG 60.006 63.158 5.18 0.00 35.20 2.90
191 192 1.006337 CTGGAGCGGCTAGATCTGC 60.006 63.158 5.18 7.04 38.60 4.26
192 193 2.049618 GGAGCGGCTAGATCTGCG 60.050 66.667 5.18 5.32 42.92 5.18
193 194 2.049618 GAGCGGCTAGATCTGCGG 60.050 66.667 5.18 12.02 42.92 5.69
194 195 2.835431 AGCGGCTAGATCTGCGGT 60.835 61.111 5.18 6.67 42.92 5.68
195 196 2.659897 GCGGCTAGATCTGCGGTG 60.660 66.667 5.18 2.59 34.03 4.94
196 197 2.028190 CGGCTAGATCTGCGGTGG 59.972 66.667 5.18 0.00 0.00 4.61
197 198 2.786495 CGGCTAGATCTGCGGTGGT 61.786 63.158 5.18 0.00 0.00 4.16
198 199 1.227380 GGCTAGATCTGCGGTGGTG 60.227 63.158 5.18 0.00 0.00 4.17
199 200 1.517832 GCTAGATCTGCGGTGGTGT 59.482 57.895 5.18 0.00 0.00 4.16
200 201 0.108138 GCTAGATCTGCGGTGGTGTT 60.108 55.000 5.18 0.00 0.00 3.32
201 202 1.645034 CTAGATCTGCGGTGGTGTTG 58.355 55.000 5.18 0.00 0.00 3.33
202 203 0.249120 TAGATCTGCGGTGGTGTTGG 59.751 55.000 5.18 0.00 0.00 3.77
203 204 1.302511 GATCTGCGGTGGTGTTGGT 60.303 57.895 0.00 0.00 0.00 3.67
204 205 0.036765 GATCTGCGGTGGTGTTGGTA 60.037 55.000 0.00 0.00 0.00 3.25
205 206 0.036388 ATCTGCGGTGGTGTTGGTAG 60.036 55.000 0.00 0.00 0.00 3.18
206 207 1.671054 CTGCGGTGGTGTTGGTAGG 60.671 63.158 0.00 0.00 0.00 3.18
207 208 2.107041 CTGCGGTGGTGTTGGTAGGA 62.107 60.000 0.00 0.00 0.00 2.94
208 209 1.670083 GCGGTGGTGTTGGTAGGAC 60.670 63.158 0.00 0.00 0.00 3.85
209 210 2.055299 CGGTGGTGTTGGTAGGACT 58.945 57.895 0.00 0.00 0.00 3.85
210 211 0.320421 CGGTGGTGTTGGTAGGACTG 60.320 60.000 0.00 0.00 0.00 3.51
211 212 0.036306 GGTGGTGTTGGTAGGACTGG 59.964 60.000 0.00 0.00 0.00 4.00
212 213 0.036306 GTGGTGTTGGTAGGACTGGG 59.964 60.000 0.00 0.00 0.00 4.45
213 214 0.400815 TGGTGTTGGTAGGACTGGGT 60.401 55.000 0.00 0.00 0.00 4.51
214 215 0.036306 GGTGTTGGTAGGACTGGGTG 59.964 60.000 0.00 0.00 0.00 4.61
215 216 0.763035 GTGTTGGTAGGACTGGGTGT 59.237 55.000 0.00 0.00 0.00 4.16
216 217 1.142262 GTGTTGGTAGGACTGGGTGTT 59.858 52.381 0.00 0.00 0.00 3.32
217 218 1.142060 TGTTGGTAGGACTGGGTGTTG 59.858 52.381 0.00 0.00 0.00 3.33
218 219 0.768622 TTGGTAGGACTGGGTGTTGG 59.231 55.000 0.00 0.00 0.00 3.77
219 220 1.002502 GGTAGGACTGGGTGTTGGC 60.003 63.158 0.00 0.00 0.00 4.52
220 221 1.758592 GTAGGACTGGGTGTTGGCA 59.241 57.895 0.00 0.00 0.00 4.92
221 222 0.109723 GTAGGACTGGGTGTTGGCAA 59.890 55.000 0.00 0.00 0.00 4.52
222 223 1.072266 TAGGACTGGGTGTTGGCAAT 58.928 50.000 1.92 0.00 0.00 3.56
223 224 0.540365 AGGACTGGGTGTTGGCAATG 60.540 55.000 1.92 0.00 0.00 2.82
224 225 1.535204 GGACTGGGTGTTGGCAATGG 61.535 60.000 1.92 0.00 0.00 3.16
225 226 2.158561 GACTGGGTGTTGGCAATGGC 62.159 60.000 1.92 0.00 40.13 4.40
226 227 3.285523 CTGGGTGTTGGCAATGGCG 62.286 63.158 1.92 0.00 42.47 5.69
227 228 2.988684 GGGTGTTGGCAATGGCGA 60.989 61.111 1.92 0.00 42.47 5.54
228 229 2.568090 GGTGTTGGCAATGGCGAG 59.432 61.111 1.92 0.00 42.47 5.03
229 230 2.126346 GTGTTGGCAATGGCGAGC 60.126 61.111 1.92 0.00 42.47 5.03
230 231 3.736100 TGTTGGCAATGGCGAGCG 61.736 61.111 1.92 0.00 42.47 5.03
231 232 3.430862 GTTGGCAATGGCGAGCGA 61.431 61.111 1.92 0.00 42.47 4.93
232 233 3.126879 TTGGCAATGGCGAGCGAG 61.127 61.111 1.51 0.00 42.47 5.03
233 234 3.604129 TTGGCAATGGCGAGCGAGA 62.604 57.895 1.51 0.00 42.47 4.04
234 235 3.267860 GGCAATGGCGAGCGAGAG 61.268 66.667 0.00 0.00 42.47 3.20
235 236 3.267860 GCAATGGCGAGCGAGAGG 61.268 66.667 0.00 0.00 0.00 3.69
236 237 3.267860 CAATGGCGAGCGAGAGGC 61.268 66.667 0.00 0.00 44.05 4.70
245 246 4.838486 GCGAGAGGCGTGGAGTCG 62.838 72.222 0.00 0.00 43.41 4.18
253 254 4.657824 CGTGGAGTCGCCGTGGTT 62.658 66.667 0.00 0.00 40.66 3.67
254 255 3.041940 GTGGAGTCGCCGTGGTTG 61.042 66.667 0.00 0.00 40.66 3.77
255 256 4.980805 TGGAGTCGCCGTGGTTGC 62.981 66.667 0.00 0.00 40.66 4.17
272 273 3.500642 CGAGAGGCGTGAGAGCGA 61.501 66.667 0.00 0.00 38.18 4.93
273 274 2.407210 GAGAGGCGTGAGAGCGAG 59.593 66.667 0.00 0.00 38.18 5.03
274 275 2.045829 AGAGGCGTGAGAGCGAGA 60.046 61.111 0.00 0.00 38.18 4.04
275 276 2.047151 GAGAGGCGTGAGAGCGAGAG 62.047 65.000 0.00 0.00 38.18 3.20
276 277 3.119709 GAGGCGTGAGAGCGAGAGG 62.120 68.421 0.00 0.00 38.18 3.69
277 278 4.863925 GGCGTGAGAGCGAGAGGC 62.864 72.222 0.00 0.00 44.05 4.70
278 279 4.863925 GCGTGAGAGCGAGAGGCC 62.864 72.222 0.00 0.00 45.17 5.19
279 280 3.137459 CGTGAGAGCGAGAGGCCT 61.137 66.667 3.86 3.86 45.17 5.19
280 281 2.493973 GTGAGAGCGAGAGGCCTG 59.506 66.667 12.00 0.00 45.17 4.85
281 282 2.049185 GTGAGAGCGAGAGGCCTGA 61.049 63.158 12.00 0.00 45.17 3.86
282 283 1.752310 TGAGAGCGAGAGGCCTGAG 60.752 63.158 12.00 1.27 45.17 3.35
283 284 1.453015 GAGAGCGAGAGGCCTGAGA 60.453 63.158 12.00 0.00 45.17 3.27
284 285 1.447317 GAGAGCGAGAGGCCTGAGAG 61.447 65.000 12.00 0.00 45.17 3.20
285 286 3.137637 GAGCGAGAGGCCTGAGAGC 62.138 68.421 12.00 10.78 45.17 4.09
286 287 4.567385 GCGAGAGGCCTGAGAGCG 62.567 72.222 12.00 7.52 34.80 5.03
287 288 2.826287 CGAGAGGCCTGAGAGCGA 60.826 66.667 12.00 0.00 0.00 4.93
415 416 1.356938 CGGCTTCCTTCCGTTAGTTC 58.643 55.000 0.00 0.00 41.85 3.01
449 450 3.878160 TTTTTGGGTCGTGAAGCTTTT 57.122 38.095 0.00 0.00 0.00 2.27
474 475 5.810587 GCAATCGTCCTTGTATCTTGTCTTA 59.189 40.000 0.00 0.00 0.00 2.10
514 517 3.880490 GAGTTGTTGGGTGTGTTGTATCA 59.120 43.478 0.00 0.00 0.00 2.15
521 524 2.812011 GGGTGTGTTGTATCAGTTGGTC 59.188 50.000 0.00 0.00 0.00 4.02
526 529 4.221041 TGTGTTGTATCAGTTGGTCCGATA 59.779 41.667 0.00 0.00 0.00 2.92
530 533 4.956085 TGTATCAGTTGGTCCGATAATGG 58.044 43.478 0.00 0.00 0.00 3.16
540 543 4.578516 TGGTCCGATAATGGTTGCTTTATG 59.421 41.667 0.00 0.00 0.00 1.90
566 569 0.673985 GCGGCAGAAACCCTTTTTCT 59.326 50.000 0.00 0.00 39.16 2.52
582 585 2.509052 TTCTGAATAGATGCGACCGG 57.491 50.000 0.00 0.00 31.81 5.28
655 686 2.932614 GCTACTCTGCAACTGTACATGG 59.067 50.000 0.00 0.00 0.00 3.66
667 698 1.763256 TACATGGGTACGGGCCTCC 60.763 63.158 0.84 0.95 0.00 4.30
687 718 1.864711 CAAAACTGCCGTTTCTCTCGA 59.135 47.619 6.71 0.00 42.28 4.04
688 719 2.234300 AAACTGCCGTTTCTCTCGAA 57.766 45.000 0.00 0.00 39.00 3.71
798 829 3.103911 GCTCCAACCGTCACGTCG 61.104 66.667 0.00 0.00 0.00 5.12
837 868 3.908081 ACGCTCCAACCGTCACGT 61.908 61.111 0.00 0.00 32.83 4.49
838 869 3.103911 CGCTCCAACCGTCACGTC 61.104 66.667 0.00 0.00 0.00 4.34
839 870 2.737376 GCTCCAACCGTCACGTCC 60.737 66.667 0.00 0.00 0.00 4.79
840 871 2.048503 CTCCAACCGTCACGTCCC 60.049 66.667 0.00 0.00 0.00 4.46
841 872 2.838693 TCCAACCGTCACGTCCCA 60.839 61.111 0.00 0.00 0.00 4.37
842 873 2.109387 CCAACCGTCACGTCCCAA 59.891 61.111 0.00 0.00 0.00 4.12
843 874 2.248835 CCAACCGTCACGTCCCAAC 61.249 63.158 0.00 0.00 0.00 3.77
844 875 1.227438 CAACCGTCACGTCCCAACT 60.227 57.895 0.00 0.00 0.00 3.16
845 876 1.068585 AACCGTCACGTCCCAACTC 59.931 57.895 0.00 0.00 0.00 3.01
846 877 2.048503 CCGTCACGTCCCAACTCC 60.049 66.667 0.00 0.00 0.00 3.85
847 878 2.571216 CCGTCACGTCCCAACTCCT 61.571 63.158 0.00 0.00 0.00 3.69
848 879 1.246056 CCGTCACGTCCCAACTCCTA 61.246 60.000 0.00 0.00 0.00 2.94
849 880 0.170561 CGTCACGTCCCAACTCCTAG 59.829 60.000 0.00 0.00 0.00 3.02
850 881 1.542492 GTCACGTCCCAACTCCTAGA 58.458 55.000 0.00 0.00 0.00 2.43
851 882 1.891150 GTCACGTCCCAACTCCTAGAA 59.109 52.381 0.00 0.00 0.00 2.10
852 883 1.891150 TCACGTCCCAACTCCTAGAAC 59.109 52.381 0.00 0.00 0.00 3.01
881 912 3.762992 CGCGCCGCATATACACCG 61.763 66.667 10.75 0.00 0.00 4.94
922 953 0.949105 CTGCACTTACCCACGACACC 60.949 60.000 0.00 0.00 0.00 4.16
926 957 1.049855 ACTTACCCACGACACCACCA 61.050 55.000 0.00 0.00 0.00 4.17
932 963 3.702048 ACGACACCACCATCCCGG 61.702 66.667 0.00 0.00 42.50 5.73
1005 1040 0.877649 CGATCCGAGTTGCCATGGAG 60.878 60.000 18.40 0.00 33.21 3.86
1129 1164 4.021925 AGGTTCTGGCGGCTCACC 62.022 66.667 11.43 13.24 0.00 4.02
1160 1195 2.516225 GGCCTATCCGGTTGCCAC 60.516 66.667 17.30 0.00 43.46 5.01
1161 1196 2.516225 GCCTATCCGGTTGCCACC 60.516 66.667 0.00 0.00 40.16 4.61
1193 1228 3.374402 ACAGCCCGTCGTCTCTGG 61.374 66.667 9.42 0.00 0.00 3.86
1382 1483 1.370810 TGCCACTCGAGCATCAACA 59.629 52.632 13.61 0.00 34.69 3.33
1383 1484 0.671472 TGCCACTCGAGCATCAACAG 60.671 55.000 13.61 0.00 34.69 3.16
1384 1485 0.390340 GCCACTCGAGCATCAACAGA 60.390 55.000 13.61 0.00 33.17 3.41
1385 1486 1.741732 GCCACTCGAGCATCAACAGAT 60.742 52.381 13.61 0.00 33.17 2.90
1386 1487 1.931841 CCACTCGAGCATCAACAGATG 59.068 52.381 13.61 0.00 41.63 2.90
1496 1606 2.298158 CTAGTTCACTCGCCGGCCAT 62.298 60.000 23.46 2.75 0.00 4.40
1505 1615 4.211502 GCCGGCCATGATGCAACC 62.212 66.667 18.11 0.00 0.00 3.77
1557 1667 1.517257 GTCGCTGGAGGTGATGTCG 60.517 63.158 0.00 0.00 36.79 4.35
1574 1684 0.098200 TCGACACTCGAATACCAGCG 59.902 55.000 0.00 0.00 46.90 5.18
1734 1844 4.326255 CCATCACAGGAAGGTGGC 57.674 61.111 0.00 0.00 39.27 5.01
1753 1863 4.394712 AGGGCCAGTTCTTCGCCG 62.395 66.667 6.18 0.00 43.99 6.46
1778 1888 4.225497 GCAGCCAGGCGACTATTT 57.775 55.556 5.55 0.00 40.21 1.40
1958 2082 7.865889 ACATTAAAACTATATGCACTCGATCGA 59.134 33.333 18.32 18.32 0.00 3.59
1959 2083 8.864024 CATTAAAACTATATGCACTCGATCGAT 58.136 33.333 19.78 5.78 0.00 3.59
1960 2084 6.936222 AAAACTATATGCACTCGATCGATC 57.064 37.500 19.78 15.68 0.00 3.69
1978 2102 1.596203 CGCCATGCATGATCGTCCT 60.596 57.895 28.31 0.00 0.00 3.85
2004 2128 6.149129 AGGAGTTTGTTCCTGTGATTTTTC 57.851 37.500 0.00 0.00 45.84 2.29
2011 2135 2.585330 TCCTGTGATTTTTCTGCAGCA 58.415 42.857 9.47 0.00 0.00 4.41
2072 2196 3.802139 CGGAACATACACGCACATTATCT 59.198 43.478 0.00 0.00 0.00 1.98
2074 2198 5.501715 GGAACATACACGCACATTATCTTG 58.498 41.667 0.00 0.00 0.00 3.02
2148 2275 0.104620 AGGTGGTAAGTGACTGGGGT 60.105 55.000 0.00 0.00 0.00 4.95
2329 2465 1.409064 GTATGTCGAGTCCTGCATCCA 59.591 52.381 0.00 0.00 0.00 3.41
2495 2634 1.610624 GCCACCTCCGTGAATCTTCAA 60.611 52.381 0.00 0.00 43.14 2.69
2530 2669 6.752815 TCATCTTCGTACATACAATTGCGTTA 59.247 34.615 5.05 0.00 0.00 3.18
2541 2680 4.373527 ACAATTGCGTTAGTGACACTACA 58.626 39.130 14.96 7.48 28.93 2.74
2560 2699 0.679505 ACTACGTTTCCTGCAGCTGA 59.320 50.000 20.43 0.00 0.00 4.26
2618 2766 2.202570 CGGCGGTACCTTCGTGAG 60.203 66.667 10.90 0.00 35.61 3.51
2693 2841 2.680913 CCGCAACCAAAGAGCTCCG 61.681 63.158 10.93 3.83 0.00 4.63
2942 3091 6.811665 TGGAGAAAAGACAACTGTACGATATG 59.188 38.462 0.00 0.00 0.00 1.78
3086 3235 8.922058 TCTGTAATAATCGTAGGAACACTTTC 57.078 34.615 0.00 0.00 0.00 2.62
3119 3269 8.677148 ATGTATCCATGGTGTGTTCTATTTAC 57.323 34.615 12.58 0.00 0.00 2.01
3203 3372 9.967451 TTCAGGGTGTGTTCTATTTATTTATGA 57.033 29.630 0.00 0.00 0.00 2.15
3294 3463 8.911918 AACATATGTTGTGGTTGTAGTCTTTA 57.088 30.769 20.19 0.00 38.99 1.85
3310 3479 7.604927 TGTAGTCTTTAACACACAAGTTGAAGT 59.395 33.333 10.54 4.89 42.41 3.01
3311 3480 9.090692 GTAGTCTTTAACACACAAGTTGAAGTA 57.909 33.333 10.54 0.00 42.41 2.24
3337 3506 4.098960 TCCTTGTAGAGTCGAACTGTTGTT 59.901 41.667 0.00 0.00 39.42 2.83
3338 3507 4.209288 CCTTGTAGAGTCGAACTGTTGTTG 59.791 45.833 0.00 0.00 36.39 3.33
3339 3508 4.380841 TGTAGAGTCGAACTGTTGTTGT 57.619 40.909 0.00 0.00 36.39 3.32
3385 3554 4.621460 TGAAGATGTTCGATTCAACTCGTC 59.379 41.667 0.00 0.32 39.62 4.20
3391 3560 7.858382 AGATGTTCGATTCAACTCGTCTATTAG 59.142 37.037 0.00 0.00 39.62 1.73
3392 3561 6.849502 TGTTCGATTCAACTCGTCTATTAGT 58.150 36.000 0.00 0.00 39.62 2.24
3449 3618 5.833131 GCTCCCCACCTGAATATATTTCAAA 59.167 40.000 0.00 0.00 0.00 2.69
3450 3619 6.494835 GCTCCCCACCTGAATATATTTCAAAT 59.505 38.462 0.00 0.00 0.00 2.32
3463 3632 3.616956 TTTCAAATGGGTGTTGCAACA 57.383 38.095 27.96 27.96 36.38 3.33
3465 3634 3.834489 TCAAATGGGTGTTGCAACATT 57.166 38.095 33.16 21.00 41.59 2.71
3512 3681 0.807667 AGAGATGATCACGCCGCAAC 60.808 55.000 0.00 0.00 0.00 4.17
3524 3693 2.180204 CCGCAACCCCGATGTGATC 61.180 63.158 0.00 0.00 0.00 2.92
3541 3710 1.623542 ATCGCGGGGCTAAGAGGTTT 61.624 55.000 6.13 0.00 0.00 3.27
3562 3731 7.611855 AGGTTTTTAATCTATGTGACAAGGAGG 59.388 37.037 0.00 0.00 0.00 4.30
3613 3782 4.110482 CAAAGTTAGTCGATTCTACCCCG 58.890 47.826 0.00 0.00 0.00 5.73
3614 3783 3.010200 AGTTAGTCGATTCTACCCCGT 57.990 47.619 0.00 0.00 0.00 5.28
3700 3869 0.842030 TGAGAGGCATGTGGGAGGTT 60.842 55.000 0.00 0.00 0.00 3.50
3707 3876 1.686052 GCATGTGGGAGGTTTTGTTGA 59.314 47.619 0.00 0.00 0.00 3.18
3708 3877 2.288395 GCATGTGGGAGGTTTTGTTGAG 60.288 50.000 0.00 0.00 0.00 3.02
3709 3878 3.221771 CATGTGGGAGGTTTTGTTGAGA 58.778 45.455 0.00 0.00 0.00 3.27
3729 3898 2.150424 GACCACATGTCGTTGGTCG 58.850 57.895 15.22 0.00 40.93 4.79
3731 3900 1.005512 CCACATGTCGTTGGTCGGA 60.006 57.895 0.00 0.00 40.32 4.55
3734 3903 1.804151 CACATGTCGTTGGTCGGATTT 59.196 47.619 0.00 0.00 40.32 2.17
3751 3920 4.271776 CGGATTTAACCTTGGTACGATTCC 59.728 45.833 0.00 0.00 0.00 3.01
3756 3925 7.614124 TTTAACCTTGGTACGATTCCAATAC 57.386 36.000 9.99 0.00 42.89 1.89
3764 3933 5.180271 GGTACGATTCCAATACCTTGTCAA 58.820 41.667 0.00 0.00 36.26 3.18
3770 3939 6.349280 CGATTCCAATACCTTGTCAAACATGT 60.349 38.462 0.00 0.00 0.00 3.21
3772 3941 5.380900 TCCAATACCTTGTCAAACATGTCA 58.619 37.500 0.00 0.00 0.00 3.58
3780 3949 4.587584 TGTCAAACATGTCATGCAACAT 57.412 36.364 12.91 0.00 40.49 2.71
3794 3963 4.804868 TGCAACATGGCATGTAAAGAAT 57.195 36.364 31.58 13.67 44.07 2.40
3795 3964 5.911378 TGCAACATGGCATGTAAAGAATA 57.089 34.783 31.58 12.34 44.07 1.75
3802 3971 6.095440 ACATGGCATGTAAAGAATAGGTGTTC 59.905 38.462 30.56 0.00 42.78 3.18
3806 3975 5.350365 GCATGTAAAGAATAGGTGTTCACGA 59.650 40.000 0.00 0.00 0.00 4.35
3841 4010 4.632688 GTGGAAGCATCATGGGAAAATTTG 59.367 41.667 0.00 0.00 0.00 2.32
3852 4021 7.441017 TCATGGGAAAATTTGGTCTTGTTTAG 58.559 34.615 0.00 0.00 0.00 1.85
3857 4026 8.418662 GGGAAAATTTGGTCTTGTTTAGTAGTT 58.581 33.333 0.00 0.00 0.00 2.24
3868 4037 8.118607 GTCTTGTTTAGTAGTTTTGTGGTGTAC 58.881 37.037 0.00 0.00 0.00 2.90
3869 4038 7.823310 TCTTGTTTAGTAGTTTTGTGGTGTACA 59.177 33.333 0.00 0.00 37.56 2.90
3884 4053 7.404139 GTGGTGTACACTACTAGAAAAACAG 57.596 40.000 29.17 0.00 46.72 3.16
3885 4054 5.987347 TGGTGTACACTACTAGAAAAACAGC 59.013 40.000 24.55 3.66 35.33 4.40
3886 4055 6.183360 TGGTGTACACTACTAGAAAAACAGCT 60.183 38.462 24.55 0.00 35.68 4.24
3887 4056 7.014518 TGGTGTACACTACTAGAAAAACAGCTA 59.985 37.037 24.55 0.00 35.68 3.32
3888 4057 8.033626 GGTGTACACTACTAGAAAAACAGCTAT 58.966 37.037 24.55 0.00 32.83 2.97
3893 4062 9.021807 ACACTACTAGAAAAACAGCTATAGTCA 57.978 33.333 0.00 0.00 0.00 3.41
3894 4063 9.856488 CACTACTAGAAAAACAGCTATAGTCAA 57.144 33.333 0.00 0.00 0.00 3.18
3913 4082 6.993079 AGTCAATATGGATACTAATGACGCA 58.007 36.000 0.00 0.00 36.28 5.24
3914 4083 7.615403 AGTCAATATGGATACTAATGACGCAT 58.385 34.615 0.00 0.00 36.28 4.73
3915 4084 8.097038 AGTCAATATGGATACTAATGACGCATT 58.903 33.333 9.46 9.46 36.28 3.56
3916 4085 9.366216 GTCAATATGGATACTAATGACGCATTA 57.634 33.333 10.47 10.47 35.54 1.90
3922 4091 8.702163 TGGATACTAATGACGCATTATACATG 57.298 34.615 11.09 0.00 36.03 3.21
3923 4092 8.311109 TGGATACTAATGACGCATTATACATGT 58.689 33.333 2.69 2.69 36.03 3.21
3924 4093 8.595533 GGATACTAATGACGCATTATACATGTG 58.404 37.037 9.11 0.00 36.03 3.21
3925 4094 6.228273 ACTAATGACGCATTATACATGTGC 57.772 37.500 9.11 1.41 36.03 4.57
3930 4099 2.995466 GCATTATACATGTGCGCCAT 57.005 45.000 9.11 5.09 0.00 4.40
3931 4100 3.287312 GCATTATACATGTGCGCCATT 57.713 42.857 9.11 2.43 0.00 3.16
3932 4101 4.418013 GCATTATACATGTGCGCCATTA 57.582 40.909 9.11 4.46 0.00 1.90
3933 4102 4.158384 GCATTATACATGTGCGCCATTAC 58.842 43.478 9.11 0.00 0.00 1.89
3934 4103 4.320129 GCATTATACATGTGCGCCATTACA 60.320 41.667 9.11 1.99 0.00 2.41
3935 4104 5.756849 CATTATACATGTGCGCCATTACAA 58.243 37.500 9.11 0.66 0.00 2.41
3936 4105 5.819825 TTATACATGTGCGCCATTACAAA 57.180 34.783 9.11 0.00 0.00 2.83
3937 4106 4.710423 ATACATGTGCGCCATTACAAAA 57.290 36.364 9.11 0.00 0.00 2.44
3938 4107 3.591196 ACATGTGCGCCATTACAAAAT 57.409 38.095 4.18 0.00 0.00 1.82
3939 4108 4.710423 ACATGTGCGCCATTACAAAATA 57.290 36.364 4.18 0.00 0.00 1.40
3940 4109 4.671377 ACATGTGCGCCATTACAAAATAG 58.329 39.130 4.18 0.00 0.00 1.73
3941 4110 4.157656 ACATGTGCGCCATTACAAAATAGT 59.842 37.500 4.18 0.00 0.00 2.12
3942 4111 5.355630 ACATGTGCGCCATTACAAAATAGTA 59.644 36.000 4.18 0.00 0.00 1.82
3943 4112 5.881777 TGTGCGCCATTACAAAATAGTAA 57.118 34.783 4.18 0.00 38.25 2.24
3944 4113 6.443934 TGTGCGCCATTACAAAATAGTAAT 57.556 33.333 4.18 0.00 43.51 1.89
3955 4124 9.882996 ATTACAAAATAGTAATGACGCATCATG 57.117 29.630 0.00 0.00 45.26 3.07
3956 4125 7.320443 ACAAAATAGTAATGACGCATCATGT 57.680 32.000 0.00 0.00 45.26 3.21
3957 4126 7.188834 ACAAAATAGTAATGACGCATCATGTG 58.811 34.615 0.00 0.00 45.26 3.21
3958 4127 6.925610 AAATAGTAATGACGCATCATGTGT 57.074 33.333 2.67 2.67 45.26 3.72
3959 4128 8.334632 CAAAATAGTAATGACGCATCATGTGTA 58.665 33.333 3.14 0.00 45.26 2.90
3960 4129 7.643528 AATAGTAATGACGCATCATGTGTAG 57.356 36.000 3.14 0.00 45.26 2.74
3961 4130 4.371786 AGTAATGACGCATCATGTGTAGG 58.628 43.478 3.14 0.00 45.26 3.18
3962 4131 2.988010 ATGACGCATCATGTGTAGGT 57.012 45.000 3.14 0.00 44.26 3.08
3963 4132 2.008752 TGACGCATCATGTGTAGGTG 57.991 50.000 3.14 0.00 41.77 4.00
3964 4133 0.652592 GACGCATCATGTGTAGGTGC 59.347 55.000 3.14 0.00 41.77 5.01
3966 4135 1.353103 GCATCATGTGTAGGTGCGC 59.647 57.895 0.00 0.00 0.00 6.09
3967 4136 2.016961 CATCATGTGTAGGTGCGCC 58.983 57.895 8.71 8.71 0.00 6.53
3968 4137 0.744057 CATCATGTGTAGGTGCGCCA 60.744 55.000 20.59 1.18 37.19 5.69
3969 4138 0.181114 ATCATGTGTAGGTGCGCCAT 59.819 50.000 20.59 6.28 37.19 4.40
3970 4139 0.035534 TCATGTGTAGGTGCGCCATT 60.036 50.000 20.59 0.20 37.19 3.16
3971 4140 1.208293 TCATGTGTAGGTGCGCCATTA 59.792 47.619 20.59 0.00 37.19 1.90
3972 4141 1.599071 CATGTGTAGGTGCGCCATTAG 59.401 52.381 20.59 0.00 37.19 1.73
3973 4142 0.611200 TGTGTAGGTGCGCCATTAGT 59.389 50.000 20.59 0.00 37.19 2.24
3974 4143 1.826096 TGTGTAGGTGCGCCATTAGTA 59.174 47.619 20.59 0.00 37.19 1.82
3975 4144 2.234168 TGTGTAGGTGCGCCATTAGTAA 59.766 45.455 20.59 0.00 37.19 2.24
3976 4145 2.606272 GTGTAGGTGCGCCATTAGTAAC 59.394 50.000 20.59 5.25 37.19 2.50
3977 4146 2.207590 GTAGGTGCGCCATTAGTAACC 58.792 52.381 20.59 2.44 37.19 2.85
3978 4147 0.616371 AGGTGCGCCATTAGTAACCA 59.384 50.000 20.59 0.00 37.19 3.67
3979 4148 1.003812 AGGTGCGCCATTAGTAACCAA 59.996 47.619 20.59 0.00 37.19 3.67
3980 4149 1.813786 GGTGCGCCATTAGTAACCAAA 59.186 47.619 12.58 0.00 34.09 3.28
3981 4150 2.229302 GGTGCGCCATTAGTAACCAAAA 59.771 45.455 12.58 0.00 34.09 2.44
3982 4151 3.239254 GTGCGCCATTAGTAACCAAAAC 58.761 45.455 4.18 0.00 0.00 2.43
3983 4152 2.885266 TGCGCCATTAGTAACCAAAACA 59.115 40.909 4.18 0.00 0.00 2.83
3984 4153 3.057876 TGCGCCATTAGTAACCAAAACAG 60.058 43.478 4.18 0.00 0.00 3.16
3985 4154 3.057806 GCGCCATTAGTAACCAAAACAGT 60.058 43.478 0.00 0.00 0.00 3.55
3986 4155 4.154556 GCGCCATTAGTAACCAAAACAGTA 59.845 41.667 0.00 0.00 0.00 2.74
3987 4156 5.335035 GCGCCATTAGTAACCAAAACAGTAA 60.335 40.000 0.00 0.00 0.00 2.24
3988 4157 6.624204 GCGCCATTAGTAACCAAAACAGTAAT 60.624 38.462 0.00 0.00 0.00 1.89
3989 4158 6.745450 CGCCATTAGTAACCAAAACAGTAATG 59.255 38.462 0.00 0.00 36.20 1.90
3990 4159 7.361371 CGCCATTAGTAACCAAAACAGTAATGA 60.361 37.037 0.00 0.00 37.59 2.57
3991 4160 7.753580 GCCATTAGTAACCAAAACAGTAATGAC 59.246 37.037 0.00 0.00 37.59 3.06
3992 4161 7.960738 CCATTAGTAACCAAAACAGTAATGACG 59.039 37.037 0.00 0.00 37.59 4.35
3993 4162 5.352643 AGTAACCAAAACAGTAATGACGC 57.647 39.130 0.00 0.00 0.00 5.19
3994 4163 4.817464 AGTAACCAAAACAGTAATGACGCA 59.183 37.500 0.00 0.00 0.00 5.24
3995 4164 3.619233 ACCAAAACAGTAATGACGCAC 57.381 42.857 0.00 0.00 0.00 5.34
3996 4165 2.292292 ACCAAAACAGTAATGACGCACC 59.708 45.455 0.00 0.00 0.00 5.01
3997 4166 2.292016 CCAAAACAGTAATGACGCACCA 59.708 45.455 0.00 0.00 0.00 4.17
3998 4167 3.243234 CCAAAACAGTAATGACGCACCAA 60.243 43.478 0.00 0.00 0.00 3.67
3999 4168 3.896648 AAACAGTAATGACGCACCAAG 57.103 42.857 0.00 0.00 0.00 3.61
4000 4169 2.543777 ACAGTAATGACGCACCAAGT 57.456 45.000 0.00 0.00 0.00 3.16
4001 4170 2.143122 ACAGTAATGACGCACCAAGTG 58.857 47.619 0.00 0.00 36.51 3.16
4002 4171 2.224185 ACAGTAATGACGCACCAAGTGA 60.224 45.455 0.00 0.00 35.23 3.41
4003 4172 2.805671 CAGTAATGACGCACCAAGTGAA 59.194 45.455 0.00 0.00 35.23 3.18
4004 4173 3.249799 CAGTAATGACGCACCAAGTGAAA 59.750 43.478 0.00 0.00 35.23 2.69
4005 4174 3.880490 AGTAATGACGCACCAAGTGAAAA 59.120 39.130 0.00 0.00 35.23 2.29
4006 4175 3.354089 AATGACGCACCAAGTGAAAAG 57.646 42.857 0.00 0.00 35.23 2.27
4007 4176 1.745232 TGACGCACCAAGTGAAAAGT 58.255 45.000 0.00 0.00 35.23 2.66
4008 4177 1.400142 TGACGCACCAAGTGAAAAGTG 59.600 47.619 0.00 0.00 35.23 3.16
4010 4179 2.872028 GCACCAAGTGAAAAGTGCG 58.128 52.632 0.00 0.00 45.28 5.34
4011 4180 0.100503 GCACCAAGTGAAAAGTGCGT 59.899 50.000 0.00 0.00 45.28 5.24
4012 4181 1.859998 GCACCAAGTGAAAAGTGCGTC 60.860 52.381 0.00 0.00 45.28 5.19
4013 4182 1.400142 CACCAAGTGAAAAGTGCGTCA 59.600 47.619 0.00 0.00 35.23 4.35
4014 4183 2.033299 CACCAAGTGAAAAGTGCGTCAT 59.967 45.455 0.00 0.00 35.23 3.06
4015 4184 2.687935 ACCAAGTGAAAAGTGCGTCATT 59.312 40.909 0.00 0.00 0.00 2.57
4016 4185 3.880490 ACCAAGTGAAAAGTGCGTCATTA 59.120 39.130 0.00 0.00 0.00 1.90
4017 4186 4.518970 ACCAAGTGAAAAGTGCGTCATTAT 59.481 37.500 0.00 0.00 0.00 1.28
4018 4187 5.009610 ACCAAGTGAAAAGTGCGTCATTATT 59.990 36.000 0.00 0.00 0.00 1.40
4019 4188 6.205853 ACCAAGTGAAAAGTGCGTCATTATTA 59.794 34.615 0.00 0.00 0.00 0.98
4020 4189 7.081349 CCAAGTGAAAAGTGCGTCATTATTAA 58.919 34.615 0.00 0.00 0.00 1.40
4021 4190 7.271223 CCAAGTGAAAAGTGCGTCATTATTAAG 59.729 37.037 0.00 0.00 0.00 1.85
4022 4191 7.435068 AGTGAAAAGTGCGTCATTATTAAGT 57.565 32.000 0.00 0.00 0.00 2.24
4023 4192 7.871853 AGTGAAAAGTGCGTCATTATTAAGTT 58.128 30.769 0.00 0.00 0.00 2.66
4024 4193 8.349983 AGTGAAAAGTGCGTCATTATTAAGTTT 58.650 29.630 0.00 0.00 0.00 2.66
4025 4194 8.417176 GTGAAAAGTGCGTCATTATTAAGTTTG 58.583 33.333 0.00 0.00 0.00 2.93
4026 4195 8.346300 TGAAAAGTGCGTCATTATTAAGTTTGA 58.654 29.630 0.00 0.00 0.00 2.69
4027 4196 8.502161 AAAAGTGCGTCATTATTAAGTTTGAC 57.498 30.769 5.00 5.00 36.09 3.18
4028 4197 6.178239 AGTGCGTCATTATTAAGTTTGACC 57.822 37.500 8.17 3.94 36.06 4.02
4029 4198 5.703592 AGTGCGTCATTATTAAGTTTGACCA 59.296 36.000 8.17 5.71 36.06 4.02
4030 4199 6.205853 AGTGCGTCATTATTAAGTTTGACCAA 59.794 34.615 8.17 0.00 36.06 3.67
4031 4200 6.523201 GTGCGTCATTATTAAGTTTGACCAAG 59.477 38.462 8.17 0.00 36.06 3.61
4032 4201 6.027749 GCGTCATTATTAAGTTTGACCAAGG 58.972 40.000 8.17 0.00 36.06 3.61
4033 4202 6.349033 GCGTCATTATTAAGTTTGACCAAGGT 60.349 38.462 0.00 0.00 36.06 3.50
4034 4203 7.590279 CGTCATTATTAAGTTTGACCAAGGTT 58.410 34.615 0.00 0.00 36.06 3.50
4035 4204 8.079809 CGTCATTATTAAGTTTGACCAAGGTTT 58.920 33.333 0.00 0.00 36.06 3.27
4036 4205 9.191995 GTCATTATTAAGTTTGACCAAGGTTTG 57.808 33.333 0.00 0.00 33.91 2.93
4037 4206 9.137459 TCATTATTAAGTTTGACCAAGGTTTGA 57.863 29.630 0.00 0.00 0.00 2.69
4038 4207 9.191995 CATTATTAAGTTTGACCAAGGTTTGAC 57.808 33.333 0.00 0.00 0.00 3.18
4039 4208 5.585820 TTAAGTTTGACCAAGGTTTGACC 57.414 39.130 0.00 0.00 38.99 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.436087 GATACTCATGGCGACCGGGG 62.436 65.000 6.32 0.00 0.00 5.73
18 19 1.006102 GATACTCATGGCGACCGGG 60.006 63.158 6.32 0.00 0.00 5.73
19 20 1.006102 GGATACTCATGGCGACCGG 60.006 63.158 0.00 0.00 0.00 5.28
20 21 1.006102 GGGATACTCATGGCGACCG 60.006 63.158 0.00 0.00 0.00 4.79
21 22 1.371558 GGGGATACTCATGGCGACC 59.628 63.158 0.00 0.00 36.63 4.79
30 31 0.105039 CAGTTCCGCTGGGGATACTC 59.895 60.000 14.71 6.07 46.62 2.59
31 32 2.212327 CAGTTCCGCTGGGGATACT 58.788 57.895 14.71 16.06 46.62 2.12
32 33 4.857251 CAGTTCCGCTGGGGATAC 57.143 61.111 14.71 14.28 46.62 2.24
39 40 0.247460 TGATCTCACCAGTTCCGCTG 59.753 55.000 0.00 0.00 44.63 5.18
40 41 0.534412 CTGATCTCACCAGTTCCGCT 59.466 55.000 0.00 0.00 0.00 5.52
41 42 0.247736 ACTGATCTCACCAGTTCCGC 59.752 55.000 0.00 0.00 41.68 5.54
42 43 1.821753 AGACTGATCTCACCAGTTCCG 59.178 52.381 0.00 0.00 44.14 4.30
53 54 2.305928 CGGAGATGGTGAGACTGATCT 58.694 52.381 0.00 0.00 38.15 2.75
54 55 1.339610 CCGGAGATGGTGAGACTGATC 59.660 57.143 0.00 0.00 0.00 2.92
55 56 1.407936 CCGGAGATGGTGAGACTGAT 58.592 55.000 0.00 0.00 0.00 2.90
56 57 0.684479 CCCGGAGATGGTGAGACTGA 60.684 60.000 0.73 0.00 0.00 3.41
57 58 0.684479 TCCCGGAGATGGTGAGACTG 60.684 60.000 0.73 0.00 0.00 3.51
58 59 0.041238 TTCCCGGAGATGGTGAGACT 59.959 55.000 0.73 0.00 0.00 3.24
59 60 0.461961 CTTCCCGGAGATGGTGAGAC 59.538 60.000 0.73 0.00 0.00 3.36
60 61 0.687757 CCTTCCCGGAGATGGTGAGA 60.688 60.000 0.73 0.00 35.50 3.27
61 62 1.826024 CCTTCCCGGAGATGGTGAG 59.174 63.158 0.73 0.00 35.50 3.51
62 63 4.050313 CCTTCCCGGAGATGGTGA 57.950 61.111 0.73 0.00 35.50 4.02
65 66 0.462047 CGAAACCTTCCCGGAGATGG 60.462 60.000 17.77 17.77 43.89 3.51
66 67 0.535335 TCGAAACCTTCCCGGAGATG 59.465 55.000 0.73 0.62 36.31 2.90
67 68 0.824759 CTCGAAACCTTCCCGGAGAT 59.175 55.000 0.73 0.00 36.31 2.75
68 69 1.255667 CCTCGAAACCTTCCCGGAGA 61.256 60.000 0.73 0.00 36.31 3.71
69 70 1.218316 CCTCGAAACCTTCCCGGAG 59.782 63.158 0.73 0.00 36.31 4.63
70 71 0.616679 ATCCTCGAAACCTTCCCGGA 60.617 55.000 0.73 0.00 36.31 5.14
71 72 0.462047 CATCCTCGAAACCTTCCCGG 60.462 60.000 0.00 0.00 39.35 5.73
72 73 0.249398 ACATCCTCGAAACCTTCCCG 59.751 55.000 0.00 0.00 0.00 5.14
73 74 1.679032 CCACATCCTCGAAACCTTCCC 60.679 57.143 0.00 0.00 0.00 3.97
74 75 1.278127 TCCACATCCTCGAAACCTTCC 59.722 52.381 0.00 0.00 0.00 3.46
75 76 2.622436 CTCCACATCCTCGAAACCTTC 58.378 52.381 0.00 0.00 0.00 3.46
76 77 1.279271 CCTCCACATCCTCGAAACCTT 59.721 52.381 0.00 0.00 0.00 3.50
77 78 0.905357 CCTCCACATCCTCGAAACCT 59.095 55.000 0.00 0.00 0.00 3.50
78 79 0.107654 CCCTCCACATCCTCGAAACC 60.108 60.000 0.00 0.00 0.00 3.27
79 80 0.107654 CCCCTCCACATCCTCGAAAC 60.108 60.000 0.00 0.00 0.00 2.78
80 81 1.910580 GCCCCTCCACATCCTCGAAA 61.911 60.000 0.00 0.00 0.00 3.46
81 82 2.367202 GCCCCTCCACATCCTCGAA 61.367 63.158 0.00 0.00 0.00 3.71
82 83 2.764128 GCCCCTCCACATCCTCGA 60.764 66.667 0.00 0.00 0.00 4.04
83 84 3.083349 TGCCCCTCCACATCCTCG 61.083 66.667 0.00 0.00 0.00 4.63
84 85 1.977293 GACTGCCCCTCCACATCCTC 61.977 65.000 0.00 0.00 0.00 3.71
85 86 1.997874 GACTGCCCCTCCACATCCT 60.998 63.158 0.00 0.00 0.00 3.24
86 87 2.592308 GACTGCCCCTCCACATCC 59.408 66.667 0.00 0.00 0.00 3.51
87 88 2.187946 CGACTGCCCCTCCACATC 59.812 66.667 0.00 0.00 0.00 3.06
88 89 2.284625 TCGACTGCCCCTCCACAT 60.285 61.111 0.00 0.00 0.00 3.21
89 90 2.997315 CTCGACTGCCCCTCCACA 60.997 66.667 0.00 0.00 0.00 4.17
90 91 3.775654 CCTCGACTGCCCCTCCAC 61.776 72.222 0.00 0.00 0.00 4.02
91 92 3.965026 CTCCTCGACTGCCCCTCCA 62.965 68.421 0.00 0.00 0.00 3.86
92 93 3.151022 CTCCTCGACTGCCCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
93 94 3.151022 CCTCCTCGACTGCCCCTC 61.151 72.222 0.00 0.00 0.00 4.30
94 95 4.787280 CCCTCCTCGACTGCCCCT 62.787 72.222 0.00 0.00 0.00 4.79
96 97 4.779733 TCCCCTCCTCGACTGCCC 62.780 72.222 0.00 0.00 0.00 5.36
97 98 2.683933 TTCCCCTCCTCGACTGCC 60.684 66.667 0.00 0.00 0.00 4.85
98 99 2.726351 CCTTCCCCTCCTCGACTGC 61.726 68.421 0.00 0.00 0.00 4.40
99 100 2.060980 CCCTTCCCCTCCTCGACTG 61.061 68.421 0.00 0.00 0.00 3.51
100 101 2.364961 CCCTTCCCCTCCTCGACT 59.635 66.667 0.00 0.00 0.00 4.18
101 102 2.764547 CCCCTTCCCCTCCTCGAC 60.765 72.222 0.00 0.00 0.00 4.20
102 103 3.281787 ACCCCTTCCCCTCCTCGA 61.282 66.667 0.00 0.00 0.00 4.04
103 104 3.083997 CACCCCTTCCCCTCCTCG 61.084 72.222 0.00 0.00 0.00 4.63
104 105 3.412408 GCACCCCTTCCCCTCCTC 61.412 72.222 0.00 0.00 0.00 3.71
170 171 3.565910 GATCTAGCCGCTCCAGCCG 62.566 68.421 0.00 0.00 37.91 5.52
171 172 2.206536 AGATCTAGCCGCTCCAGCC 61.207 63.158 0.00 0.00 37.91 4.85
172 173 1.006337 CAGATCTAGCCGCTCCAGC 60.006 63.158 0.00 0.00 37.78 4.85
173 174 1.006337 GCAGATCTAGCCGCTCCAG 60.006 63.158 0.00 0.00 0.00 3.86
174 175 2.849964 CGCAGATCTAGCCGCTCCA 61.850 63.158 0.00 0.00 0.00 3.86
175 176 2.049618 CGCAGATCTAGCCGCTCC 60.050 66.667 0.00 0.00 0.00 4.70
176 177 2.049618 CCGCAGATCTAGCCGCTC 60.050 66.667 0.00 0.00 0.00 5.03
177 178 2.835431 ACCGCAGATCTAGCCGCT 60.835 61.111 0.00 0.00 0.00 5.52
178 179 2.659897 CACCGCAGATCTAGCCGC 60.660 66.667 0.00 0.00 0.00 6.53
179 180 2.028190 CCACCGCAGATCTAGCCG 59.972 66.667 0.00 0.00 0.00 5.52
180 181 1.227380 CACCACCGCAGATCTAGCC 60.227 63.158 0.00 0.00 0.00 3.93
181 182 0.108138 AACACCACCGCAGATCTAGC 60.108 55.000 0.00 0.70 0.00 3.42
182 183 1.645034 CAACACCACCGCAGATCTAG 58.355 55.000 0.00 0.00 0.00 2.43
183 184 0.249120 CCAACACCACCGCAGATCTA 59.751 55.000 0.00 0.00 0.00 1.98
184 185 1.003355 CCAACACCACCGCAGATCT 60.003 57.895 0.00 0.00 0.00 2.75
185 186 0.036765 TACCAACACCACCGCAGATC 60.037 55.000 0.00 0.00 0.00 2.75
186 187 0.036388 CTACCAACACCACCGCAGAT 60.036 55.000 0.00 0.00 0.00 2.90
187 188 1.369692 CTACCAACACCACCGCAGA 59.630 57.895 0.00 0.00 0.00 4.26
188 189 1.671054 CCTACCAACACCACCGCAG 60.671 63.158 0.00 0.00 0.00 5.18
189 190 2.141448 TCCTACCAACACCACCGCA 61.141 57.895 0.00 0.00 0.00 5.69
190 191 1.670083 GTCCTACCAACACCACCGC 60.670 63.158 0.00 0.00 0.00 5.68
191 192 0.320421 CAGTCCTACCAACACCACCG 60.320 60.000 0.00 0.00 0.00 4.94
192 193 0.036306 CCAGTCCTACCAACACCACC 59.964 60.000 0.00 0.00 0.00 4.61
193 194 0.036306 CCCAGTCCTACCAACACCAC 59.964 60.000 0.00 0.00 0.00 4.16
194 195 0.400815 ACCCAGTCCTACCAACACCA 60.401 55.000 0.00 0.00 0.00 4.17
195 196 0.036306 CACCCAGTCCTACCAACACC 59.964 60.000 0.00 0.00 0.00 4.16
196 197 0.763035 ACACCCAGTCCTACCAACAC 59.237 55.000 0.00 0.00 0.00 3.32
197 198 1.142060 CAACACCCAGTCCTACCAACA 59.858 52.381 0.00 0.00 0.00 3.33
198 199 1.544759 CCAACACCCAGTCCTACCAAC 60.545 57.143 0.00 0.00 0.00 3.77
199 200 0.768622 CCAACACCCAGTCCTACCAA 59.231 55.000 0.00 0.00 0.00 3.67
200 201 1.774894 GCCAACACCCAGTCCTACCA 61.775 60.000 0.00 0.00 0.00 3.25
201 202 1.002502 GCCAACACCCAGTCCTACC 60.003 63.158 0.00 0.00 0.00 3.18
202 203 0.109723 TTGCCAACACCCAGTCCTAC 59.890 55.000 0.00 0.00 0.00 3.18
203 204 1.072266 ATTGCCAACACCCAGTCCTA 58.928 50.000 0.00 0.00 0.00 2.94
204 205 0.540365 CATTGCCAACACCCAGTCCT 60.540 55.000 0.00 0.00 0.00 3.85
205 206 1.535204 CCATTGCCAACACCCAGTCC 61.535 60.000 0.00 0.00 0.00 3.85
206 207 1.966762 CCATTGCCAACACCCAGTC 59.033 57.895 0.00 0.00 0.00 3.51
207 208 2.209315 GCCATTGCCAACACCCAGT 61.209 57.895 0.00 0.00 0.00 4.00
208 209 2.658422 GCCATTGCCAACACCCAG 59.342 61.111 0.00 0.00 0.00 4.45
209 210 3.301554 CGCCATTGCCAACACCCA 61.302 61.111 0.00 0.00 0.00 4.51
210 211 2.988684 TCGCCATTGCCAACACCC 60.989 61.111 0.00 0.00 0.00 4.61
211 212 2.568090 CTCGCCATTGCCAACACC 59.432 61.111 0.00 0.00 0.00 4.16
212 213 2.126346 GCTCGCCATTGCCAACAC 60.126 61.111 0.00 0.00 0.00 3.32
213 214 3.736100 CGCTCGCCATTGCCAACA 61.736 61.111 0.00 0.00 0.00 3.33
214 215 3.386867 CTCGCTCGCCATTGCCAAC 62.387 63.158 0.00 0.00 0.00 3.77
215 216 3.126879 CTCGCTCGCCATTGCCAA 61.127 61.111 0.00 0.00 0.00 4.52
216 217 4.081185 TCTCGCTCGCCATTGCCA 62.081 61.111 0.00 0.00 0.00 4.92
217 218 3.267860 CTCTCGCTCGCCATTGCC 61.268 66.667 0.00 0.00 0.00 4.52
218 219 3.267860 CCTCTCGCTCGCCATTGC 61.268 66.667 0.00 0.00 0.00 3.56
219 220 3.267860 GCCTCTCGCTCGCCATTG 61.268 66.667 0.00 0.00 0.00 2.82
220 221 4.880537 CGCCTCTCGCTCGCCATT 62.881 66.667 0.00 0.00 34.21 3.16
225 226 4.544689 CTCCACGCCTCTCGCTCG 62.545 72.222 0.00 0.00 43.23 5.03
226 227 3.404141 GACTCCACGCCTCTCGCTC 62.404 68.421 0.00 0.00 43.23 5.03
227 228 3.444805 GACTCCACGCCTCTCGCT 61.445 66.667 0.00 0.00 43.23 4.93
228 229 4.838486 CGACTCCACGCCTCTCGC 62.838 72.222 0.00 0.00 43.23 5.03
236 237 4.657824 AACCACGGCGACTCCACG 62.658 66.667 16.62 0.00 34.01 4.94
237 238 3.041940 CAACCACGGCGACTCCAC 61.042 66.667 16.62 0.00 34.01 4.02
238 239 4.980805 GCAACCACGGCGACTCCA 62.981 66.667 16.62 0.00 34.01 3.86
248 249 3.414700 CACGCCTCTCGCAACCAC 61.415 66.667 0.00 0.00 43.23 4.16
249 250 3.573772 CTCACGCCTCTCGCAACCA 62.574 63.158 0.00 0.00 43.23 3.67
250 251 2.811317 CTCACGCCTCTCGCAACC 60.811 66.667 0.00 0.00 43.23 3.77
251 252 1.803519 CTCTCACGCCTCTCGCAAC 60.804 63.158 0.00 0.00 43.23 4.17
252 253 2.568612 CTCTCACGCCTCTCGCAA 59.431 61.111 0.00 0.00 43.23 4.85
253 254 4.121669 GCTCTCACGCCTCTCGCA 62.122 66.667 0.00 0.00 43.23 5.10
255 256 3.447634 CTCGCTCTCACGCCTCTCG 62.448 68.421 0.00 0.00 45.38 4.04
256 257 2.047151 CTCTCGCTCTCACGCCTCTC 62.047 65.000 0.00 0.00 0.00 3.20
257 258 2.045829 TCTCGCTCTCACGCCTCT 60.046 61.111 0.00 0.00 0.00 3.69
258 259 2.407210 CTCTCGCTCTCACGCCTC 59.593 66.667 0.00 0.00 0.00 4.70
259 260 3.137459 CCTCTCGCTCTCACGCCT 61.137 66.667 0.00 0.00 0.00 5.52
260 261 4.863925 GCCTCTCGCTCTCACGCC 62.864 72.222 0.00 0.00 0.00 5.68
261 262 4.863925 GGCCTCTCGCTCTCACGC 62.864 72.222 0.00 0.00 37.74 5.34
262 263 3.137459 AGGCCTCTCGCTCTCACG 61.137 66.667 0.00 0.00 37.74 4.35
263 264 2.003658 CTCAGGCCTCTCGCTCTCAC 62.004 65.000 0.00 0.00 37.74 3.51
264 265 1.752310 CTCAGGCCTCTCGCTCTCA 60.752 63.158 0.00 0.00 37.74 3.27
265 266 1.447317 CTCTCAGGCCTCTCGCTCTC 61.447 65.000 0.00 0.00 37.74 3.20
266 267 1.453745 CTCTCAGGCCTCTCGCTCT 60.454 63.158 0.00 0.00 37.74 4.09
267 268 3.119193 CTCTCAGGCCTCTCGCTC 58.881 66.667 0.00 0.00 37.74 5.03
268 269 3.146913 GCTCTCAGGCCTCTCGCT 61.147 66.667 0.00 0.00 37.74 4.93
269 270 4.567385 CGCTCTCAGGCCTCTCGC 62.567 72.222 0.00 2.05 0.00 5.03
270 271 2.826287 TCGCTCTCAGGCCTCTCG 60.826 66.667 0.00 1.93 0.00 4.04
271 272 1.752694 ACTCGCTCTCAGGCCTCTC 60.753 63.158 0.00 0.00 0.00 3.20
272 273 2.051518 CACTCGCTCTCAGGCCTCT 61.052 63.158 0.00 0.00 0.00 3.69
273 274 2.278182 GACACTCGCTCTCAGGCCTC 62.278 65.000 0.00 0.00 0.00 4.70
274 275 2.283532 ACACTCGCTCTCAGGCCT 60.284 61.111 0.00 0.00 0.00 5.19
275 276 2.183046 GACACTCGCTCTCAGGCC 59.817 66.667 0.00 0.00 0.00 5.19
276 277 2.202544 CGACACTCGCTCTCAGGC 60.203 66.667 0.00 0.00 31.14 4.85
277 278 1.154131 CACGACACTCGCTCTCAGG 60.154 63.158 0.00 0.00 45.12 3.86
278 279 0.453615 GACACGACACTCGCTCTCAG 60.454 60.000 0.00 0.00 45.12 3.35
279 280 1.574925 GACACGACACTCGCTCTCA 59.425 57.895 0.00 0.00 45.12 3.27
280 281 1.154188 GGACACGACACTCGCTCTC 60.154 63.158 0.00 0.00 45.12 3.20
281 282 1.173444 AAGGACACGACACTCGCTCT 61.173 55.000 0.00 0.00 45.12 4.09
282 283 0.729816 GAAGGACACGACACTCGCTC 60.730 60.000 0.00 0.00 45.12 5.03
283 284 1.286260 GAAGGACACGACACTCGCT 59.714 57.895 0.00 0.00 45.12 4.93
284 285 1.733399 GGAAGGACACGACACTCGC 60.733 63.158 0.00 0.00 45.12 5.03
285 286 0.387367 CAGGAAGGACACGACACTCG 60.387 60.000 0.00 0.00 46.93 4.18
286 287 0.959553 TCAGGAAGGACACGACACTC 59.040 55.000 0.00 0.00 0.00 3.51
287 288 1.341531 CTTCAGGAAGGACACGACACT 59.658 52.381 1.01 0.00 34.87 3.55
433 434 0.749818 TGCAAAAGCTTCACGACCCA 60.750 50.000 0.00 0.00 0.00 4.51
449 450 3.932710 GACAAGATACAAGGACGATTGCA 59.067 43.478 0.00 0.00 33.28 4.08
474 475 1.819288 CTCGATAGACCACACACACCT 59.181 52.381 0.00 0.00 42.67 4.00
514 517 2.026262 AGCAACCATTATCGGACCAACT 60.026 45.455 0.00 0.00 0.00 3.16
521 524 9.825972 CTTTATACATAAAGCAACCATTATCGG 57.174 33.333 8.40 0.00 41.69 4.18
540 543 2.640184 AGGGTTTCTGCCGCTTTATAC 58.360 47.619 0.00 0.00 0.00 1.47
552 555 6.127897 CGCATCTATTCAGAAAAAGGGTTTCT 60.128 38.462 0.00 0.00 39.16 2.52
566 569 1.687563 TCTCCGGTCGCATCTATTCA 58.312 50.000 0.00 0.00 0.00 2.57
582 585 4.392138 CGGACAACTCCCTTGTTTTATCTC 59.608 45.833 0.00 0.00 43.60 2.75
632 663 3.026630 TGTACAGTTGCAGAGTAGCAC 57.973 47.619 0.00 0.00 45.61 4.40
655 686 0.958876 CAGTTTTGGAGGCCCGTACC 60.959 60.000 0.00 0.00 34.29 3.34
708 739 2.815647 GTTGGAAGAGAGGGCGCG 60.816 66.667 0.00 0.00 0.00 6.86
709 740 2.436824 GGTTGGAAGAGAGGGCGC 60.437 66.667 0.00 0.00 0.00 6.53
798 829 1.810030 CGGCGGTTCTAGGAGTTGC 60.810 63.158 0.00 0.00 0.00 4.17
821 852 3.103911 GACGTGACGGTTGGAGCG 61.104 66.667 10.66 0.00 45.69 5.03
822 853 2.737376 GGACGTGACGGTTGGAGC 60.737 66.667 10.66 0.00 0.00 4.70
823 854 2.048503 GGGACGTGACGGTTGGAG 60.049 66.667 10.66 0.00 0.00 3.86
824 855 2.433146 TTGGGACGTGACGGTTGGA 61.433 57.895 10.66 0.00 0.00 3.53
825 856 2.109387 TTGGGACGTGACGGTTGG 59.891 61.111 10.66 0.00 0.00 3.77
826 857 1.219522 GAGTTGGGACGTGACGGTTG 61.220 60.000 10.66 0.00 0.00 3.77
827 858 1.068585 GAGTTGGGACGTGACGGTT 59.931 57.895 10.66 0.00 0.00 4.44
828 859 2.732658 GAGTTGGGACGTGACGGT 59.267 61.111 10.66 0.00 0.00 4.83
829 860 1.246056 TAGGAGTTGGGACGTGACGG 61.246 60.000 10.66 0.00 0.00 4.79
830 861 0.170561 CTAGGAGTTGGGACGTGACG 59.829 60.000 2.24 2.24 0.00 4.35
831 862 1.542492 TCTAGGAGTTGGGACGTGAC 58.458 55.000 0.00 0.00 0.00 3.67
832 863 1.891150 GTTCTAGGAGTTGGGACGTGA 59.109 52.381 0.00 0.00 0.00 4.35
833 864 1.067071 GGTTCTAGGAGTTGGGACGTG 60.067 57.143 0.00 0.00 0.00 4.49
834 865 1.264295 GGTTCTAGGAGTTGGGACGT 58.736 55.000 0.00 0.00 0.00 4.34
835 866 0.172803 CGGTTCTAGGAGTTGGGACG 59.827 60.000 0.00 0.00 0.00 4.79
836 867 0.108281 GCGGTTCTAGGAGTTGGGAC 60.108 60.000 0.00 0.00 0.00 4.46
837 868 1.262640 GGCGGTTCTAGGAGTTGGGA 61.263 60.000 0.00 0.00 0.00 4.37
838 869 1.221021 GGCGGTTCTAGGAGTTGGG 59.779 63.158 0.00 0.00 0.00 4.12
839 870 1.153628 CGGCGGTTCTAGGAGTTGG 60.154 63.158 0.00 0.00 0.00 3.77
840 871 1.810030 GCGGCGGTTCTAGGAGTTG 60.810 63.158 9.78 0.00 0.00 3.16
841 872 2.577593 GCGGCGGTTCTAGGAGTT 59.422 61.111 9.78 0.00 0.00 3.01
842 873 3.459063 GGCGGCGGTTCTAGGAGT 61.459 66.667 9.78 0.00 0.00 3.85
843 874 4.222847 GGGCGGCGGTTCTAGGAG 62.223 72.222 9.78 0.00 0.00 3.69
846 877 3.735037 GAAGGGGCGGCGGTTCTAG 62.735 68.421 9.78 0.00 0.00 2.43
847 878 3.777910 GAAGGGGCGGCGGTTCTA 61.778 66.667 9.78 0.00 0.00 2.10
963 994 1.542492 GAGTGGTGGAGGAAGACGTA 58.458 55.000 0.00 0.00 0.00 3.57
1193 1228 1.434696 CCGGCCATCATTTGCTGAC 59.565 57.895 2.24 0.00 36.48 3.51
1318 1419 1.414181 AGAGTGTATCATGGAAGGCGG 59.586 52.381 0.00 0.00 0.00 6.13
1330 1431 5.030147 TGGTTGAGGGTAATGAGAGTGTAT 58.970 41.667 0.00 0.00 0.00 2.29
1412 1513 3.929955 TCATGTGCTGGTCATGGAATA 57.070 42.857 6.15 0.00 41.79 1.75
1482 1592 3.469970 ATCATGGCCGGCGAGTGA 61.470 61.111 22.54 23.07 0.00 3.41
1483 1593 3.274586 CATCATGGCCGGCGAGTG 61.275 66.667 22.54 18.47 0.00 3.51
1496 1606 0.827089 CTGGTGTTGGGGTTGCATCA 60.827 55.000 0.00 0.00 0.00 3.07
1505 1615 1.180456 TTGCATCTGCTGGTGTTGGG 61.180 55.000 5.69 0.00 42.66 4.12
1544 1654 0.888619 GAGTGTCGACATCACCTCCA 59.111 55.000 23.12 0.00 36.58 3.86
1557 1667 0.454600 TCCGCTGGTATTCGAGTGTC 59.545 55.000 0.00 0.00 0.00 3.67
1574 1684 1.886542 GACCCAAATCGGCCATTATCC 59.113 52.381 2.24 0.00 0.00 2.59
1734 1844 2.815647 GCGAAGAACTGGCCCTCG 60.816 66.667 0.00 0.00 0.00 4.63
1774 1884 1.301623 CGCCACTGGGACCCAAATA 59.698 57.895 15.87 0.00 35.59 1.40
1927 2037 8.712363 CGAGTGCATATAGTTTTAATGTATGCT 58.288 33.333 13.97 0.00 44.77 3.79
1928 2038 8.708742 TCGAGTGCATATAGTTTTAATGTATGC 58.291 33.333 8.33 8.33 44.75 3.14
1931 2041 9.124807 CGATCGAGTGCATATAGTTTTAATGTA 57.875 33.333 10.26 0.00 0.00 2.29
1933 2043 8.227731 TCGATCGAGTGCATATAGTTTTAATG 57.772 34.615 15.15 0.00 0.00 1.90
1958 2082 0.952497 GGACGATCATGCATGGCGAT 60.952 55.000 33.62 23.14 32.91 4.58
1959 2083 1.595109 GGACGATCATGCATGGCGA 60.595 57.895 33.62 16.89 32.91 5.54
1960 2084 1.162181 AAGGACGATCATGCATGGCG 61.162 55.000 28.74 28.74 34.10 5.69
1961 2085 0.309922 CAAGGACGATCATGCATGGC 59.690 55.000 25.97 16.91 0.00 4.40
1962 2086 1.871676 CTCAAGGACGATCATGCATGG 59.128 52.381 25.97 12.93 0.00 3.66
1974 2098 3.142174 CAGGAACAAACTCCTCAAGGAC 58.858 50.000 0.00 0.00 44.46 3.85
1978 2102 3.924114 TCACAGGAACAAACTCCTCAA 57.076 42.857 0.00 0.00 44.46 3.02
2004 2128 2.903855 CCGGCCCTAATGCTGCAG 60.904 66.667 10.11 10.11 36.26 4.41
2011 2135 1.205460 ACAAGGTCACCGGCCCTAAT 61.205 55.000 0.00 0.00 0.00 1.73
2072 2196 1.452145 GCCGTGCCTTTGAGTTCCAA 61.452 55.000 0.00 0.00 0.00 3.53
2074 2198 2.626780 GGCCGTGCCTTTGAGTTCC 61.627 63.158 7.58 0.00 46.69 3.62
2101 2225 1.153989 TTGGGTGCCGGAATTTGGA 59.846 52.632 5.05 0.00 0.00 3.53
2169 2296 4.081586 TGGGACGCACACAACATTATACTA 60.082 41.667 0.00 0.00 0.00 1.82
2170 2297 3.267483 GGGACGCACACAACATTATACT 58.733 45.455 0.00 0.00 0.00 2.12
2171 2298 3.004171 TGGGACGCACACAACATTATAC 58.996 45.455 0.00 0.00 0.00 1.47
2172 2299 3.336138 TGGGACGCACACAACATTATA 57.664 42.857 0.00 0.00 0.00 0.98
2182 2309 4.157849 TGGAAATTATATGGGACGCACA 57.842 40.909 0.00 0.00 0.00 4.57
2222 2352 5.587844 AGTGAAAATTAGCAGGCAGTAGATG 59.412 40.000 0.00 0.00 0.00 2.90
2329 2465 2.154462 CGGCTTTGTTCCTCATCTTGT 58.846 47.619 0.00 0.00 0.00 3.16
2390 2529 0.881796 CGCGGATCATGGTAGAGCTA 59.118 55.000 0.00 0.00 0.00 3.32
2455 2594 4.444838 AGAATGTACGCCGCCGCA 62.445 61.111 0.00 0.00 38.22 5.69
2512 2651 5.061187 TGTCACTAACGCAATTGTATGTACG 59.939 40.000 7.40 3.37 0.00 3.67
2517 2656 6.090358 GTGTAGTGTCACTAACGCAATTGTAT 59.910 38.462 14.33 0.00 41.03 2.29
2530 2669 3.887716 AGGAAACGTAGTGTAGTGTCACT 59.112 43.478 10.99 10.99 45.00 3.41
2577 2716 0.321653 TCCTTTTCCTCTTGCTCGGC 60.322 55.000 0.00 0.00 0.00 5.54
2626 2774 4.864334 GCTCCCTCACGGCCATGG 62.864 72.222 7.63 7.63 0.00 3.66
2693 2841 5.169295 AGAACTTTGCGACTATTACTGTCC 58.831 41.667 0.00 0.00 0.00 4.02
2876 3025 2.417924 CCTCCTGATCTTGGACAGTTCG 60.418 54.545 4.29 0.00 32.93 3.95
3100 3250 9.734620 CATAAATGTAAATAGAACACACCATGG 57.265 33.333 11.19 11.19 0.00 3.66
3171 3340 3.040147 AGAACACACCCTGAATACACG 57.960 47.619 0.00 0.00 0.00 4.49
3203 3372 9.702494 AAGTAAAAAGTGCTACTACGACTATTT 57.298 29.630 0.00 0.00 0.00 1.40
3294 3463 7.719633 ACAAGGATATACTTCAACTTGTGTGTT 59.280 33.333 0.00 0.00 44.61 3.32
3310 3479 7.338703 ACAACAGTTCGACTCTACAAGGATATA 59.661 37.037 0.00 0.00 0.00 0.86
3311 3480 6.153000 ACAACAGTTCGACTCTACAAGGATAT 59.847 38.462 0.00 0.00 0.00 1.63
3337 3506 5.170748 CGTCAATGCATAGCCTATATGACA 58.829 41.667 18.80 0.00 36.59 3.58
3338 3507 5.171476 ACGTCAATGCATAGCCTATATGAC 58.829 41.667 11.97 11.97 34.19 3.06
3339 3508 5.405935 ACGTCAATGCATAGCCTATATGA 57.594 39.130 0.00 0.00 0.00 2.15
3449 3618 5.655974 TGTATATGAATGTTGCAACACCCAT 59.344 36.000 32.67 32.67 42.51 4.00
3450 3619 5.012893 TGTATATGAATGTTGCAACACCCA 58.987 37.500 33.29 29.74 42.51 4.51
3463 3632 7.840931 TCAAGGCTATGACGATGTATATGAAT 58.159 34.615 0.00 0.00 0.00 2.57
3465 3634 6.659242 TCTCAAGGCTATGACGATGTATATGA 59.341 38.462 0.00 0.00 0.00 2.15
3518 3687 2.016393 CTCTTAGCCCCGCGATCACA 62.016 60.000 8.23 0.00 0.00 3.58
3524 3693 0.958876 AAAAACCTCTTAGCCCCGCG 60.959 55.000 0.00 0.00 0.00 6.46
3527 3696 7.013369 CACATAGATTAAAAACCTCTTAGCCCC 59.987 40.741 0.00 0.00 0.00 5.80
3529 3698 8.613482 GTCACATAGATTAAAAACCTCTTAGCC 58.387 37.037 0.00 0.00 0.00 3.93
3541 3710 7.252612 TCACCTCCTTGTCACATAGATTAAA 57.747 36.000 0.00 0.00 0.00 1.52
3562 3731 4.188948 GCTCAATAATTGACGAGCTCAC 57.811 45.455 15.40 7.73 45.86 3.51
3585 3754 6.527372 GGTAGAATCGACTAACTTTGACACTC 59.473 42.308 0.00 0.00 0.00 3.51
3613 3782 5.050431 GGCACACAATTAAATGGTGTTCAAC 60.050 40.000 2.84 0.00 42.72 3.18
3614 3783 5.053145 GGCACACAATTAAATGGTGTTCAA 58.947 37.500 2.84 0.00 42.72 2.69
3689 3858 3.593442 TCTCAACAAAACCTCCCACAT 57.407 42.857 0.00 0.00 0.00 3.21
3690 3859 3.117701 TCATCTCAACAAAACCTCCCACA 60.118 43.478 0.00 0.00 0.00 4.17
3729 3898 5.187687 TGGAATCGTACCAAGGTTAAATCC 58.812 41.667 0.00 0.95 34.25 3.01
3751 3920 5.574055 GCATGACATGTTTGACAAGGTATTG 59.426 40.000 16.62 0.00 42.46 1.90
3756 3925 3.646611 TGCATGACATGTTTGACAAGG 57.353 42.857 16.62 0.08 31.48 3.61
3780 3949 5.414454 GTGAACACCTATTCTTTACATGCCA 59.586 40.000 0.00 0.00 0.00 4.92
3794 3963 4.401519 CCCTCTAAAGATCGTGAACACCTA 59.598 45.833 0.00 0.00 0.00 3.08
3795 3964 3.195825 CCCTCTAAAGATCGTGAACACCT 59.804 47.826 0.00 0.00 0.00 4.00
3802 3971 2.108168 TCCACCCCTCTAAAGATCGTG 58.892 52.381 0.00 0.00 0.00 4.35
3806 3975 2.562296 TGCTTCCACCCCTCTAAAGAT 58.438 47.619 0.00 0.00 0.00 2.40
3841 4010 6.094464 ACACCACAAAACTACTAAACAAGACC 59.906 38.462 0.00 0.00 0.00 3.85
3868 4037 9.856488 TTGACTATAGCTGTTTTTCTAGTAGTG 57.144 33.333 0.00 0.00 0.00 2.74
3887 4056 8.749354 TGCGTCATTAGTATCCATATTGACTAT 58.251 33.333 0.00 0.00 34.02 2.12
3888 4057 8.117813 TGCGTCATTAGTATCCATATTGACTA 57.882 34.615 0.00 0.00 34.02 2.59
3889 4058 6.993079 TGCGTCATTAGTATCCATATTGACT 58.007 36.000 0.00 0.00 34.02 3.41
3890 4059 7.834068 ATGCGTCATTAGTATCCATATTGAC 57.166 36.000 0.00 0.00 33.36 3.18
3896 4065 9.317936 CATGTATAATGCGTCATTAGTATCCAT 57.682 33.333 14.54 9.98 39.28 3.41
3897 4066 8.311109 ACATGTATAATGCGTCATTAGTATCCA 58.689 33.333 14.54 8.74 39.28 3.41
3898 4067 8.595533 CACATGTATAATGCGTCATTAGTATCC 58.404 37.037 14.54 5.08 39.28 2.59
3899 4068 8.110612 GCACATGTATAATGCGTCATTAGTATC 58.889 37.037 14.54 7.91 39.28 2.24
3900 4069 7.963981 GCACATGTATAATGCGTCATTAGTAT 58.036 34.615 14.54 8.27 39.28 2.12
3901 4070 7.346208 GCACATGTATAATGCGTCATTAGTA 57.654 36.000 14.54 6.89 39.28 1.82
3902 4071 6.228273 GCACATGTATAATGCGTCATTAGT 57.772 37.500 14.54 6.88 39.28 2.24
3911 4080 2.995466 ATGGCGCACATGTATAATGC 57.005 45.000 10.83 0.00 38.70 3.56
3912 4081 5.355467 TGTAATGGCGCACATGTATAATG 57.645 39.130 10.83 0.00 40.44 1.90
3913 4082 6.384258 TTTGTAATGGCGCACATGTATAAT 57.616 33.333 10.83 0.00 40.44 1.28
3914 4083 5.819825 TTTGTAATGGCGCACATGTATAA 57.180 34.783 10.83 7.63 40.44 0.98
3915 4084 5.819825 TTTTGTAATGGCGCACATGTATA 57.180 34.783 10.83 0.00 40.44 1.47
3916 4085 4.710423 TTTTGTAATGGCGCACATGTAT 57.290 36.364 10.83 0.00 40.44 2.29
3917 4086 4.710423 ATTTTGTAATGGCGCACATGTA 57.290 36.364 10.83 3.69 40.44 2.29
3918 4087 3.591196 ATTTTGTAATGGCGCACATGT 57.409 38.095 10.83 0.00 40.44 3.21
3919 4088 4.671377 ACTATTTTGTAATGGCGCACATG 58.329 39.130 10.83 0.00 40.44 3.21
3920 4089 4.981806 ACTATTTTGTAATGGCGCACAT 57.018 36.364 10.83 7.73 43.07 3.21
3921 4090 5.881777 TTACTATTTTGTAATGGCGCACA 57.118 34.783 10.83 5.20 0.00 4.57
3929 4098 9.882996 CATGATGCGTCATTACTATTTTGTAAT 57.117 29.630 18.92 0.00 42.37 1.89
3930 4099 8.888716 ACATGATGCGTCATTACTATTTTGTAA 58.111 29.630 18.92 0.00 42.37 2.41
3931 4100 8.334632 CACATGATGCGTCATTACTATTTTGTA 58.665 33.333 18.92 0.00 42.37 2.41
3932 4101 7.148255 ACACATGATGCGTCATTACTATTTTGT 60.148 33.333 18.92 9.22 42.37 2.83
3933 4102 7.188834 ACACATGATGCGTCATTACTATTTTG 58.811 34.615 18.92 8.58 42.37 2.44
3934 4103 7.320443 ACACATGATGCGTCATTACTATTTT 57.680 32.000 18.92 0.00 42.37 1.82
3935 4104 6.925610 ACACATGATGCGTCATTACTATTT 57.074 33.333 18.92 0.00 42.37 1.40
3936 4105 6.646653 CCTACACATGATGCGTCATTACTATT 59.353 38.462 18.92 3.54 42.37 1.73
3937 4106 6.159293 CCTACACATGATGCGTCATTACTAT 58.841 40.000 18.92 6.01 42.37 2.12
3938 4107 5.068591 ACCTACACATGATGCGTCATTACTA 59.931 40.000 18.92 7.23 42.37 1.82
3939 4108 4.141937 ACCTACACATGATGCGTCATTACT 60.142 41.667 18.92 6.46 42.37 2.24
3940 4109 4.025730 CACCTACACATGATGCGTCATTAC 60.026 45.833 18.92 0.00 42.37 1.89
3941 4110 4.119136 CACCTACACATGATGCGTCATTA 58.881 43.478 18.92 8.45 42.37 1.90
3942 4111 2.938451 CACCTACACATGATGCGTCATT 59.062 45.455 18.92 7.70 42.37 2.57
3943 4112 2.554142 CACCTACACATGATGCGTCAT 58.446 47.619 15.87 15.87 45.87 3.06
3944 4113 2.006552 GCACCTACACATGATGCGTCA 61.007 52.381 11.83 11.83 39.04 4.35
3945 4114 0.652592 GCACCTACACATGATGCGTC 59.347 55.000 0.00 0.00 0.00 5.19
3946 4115 2.767536 GCACCTACACATGATGCGT 58.232 52.632 0.00 0.00 0.00 5.24
3948 4117 1.353103 GCGCACCTACACATGATGC 59.647 57.895 0.30 0.00 0.00 3.91
3949 4118 0.744057 TGGCGCACCTACACATGATG 60.744 55.000 10.83 0.00 36.63 3.07
3950 4119 0.181114 ATGGCGCACCTACACATGAT 59.819 50.000 10.83 0.00 36.63 2.45
3951 4120 0.035534 AATGGCGCACCTACACATGA 60.036 50.000 10.83 0.00 36.63 3.07
3952 4121 1.599071 CTAATGGCGCACCTACACATG 59.401 52.381 10.83 0.00 36.63 3.21
3953 4122 1.209504 ACTAATGGCGCACCTACACAT 59.790 47.619 10.83 0.00 36.63 3.21
3954 4123 0.611200 ACTAATGGCGCACCTACACA 59.389 50.000 10.83 0.00 36.63 3.72
3955 4124 2.589798 TACTAATGGCGCACCTACAC 57.410 50.000 10.83 0.00 36.63 2.90
3956 4125 2.419021 GGTTACTAATGGCGCACCTACA 60.419 50.000 10.83 0.00 36.63 2.74
3957 4126 2.207590 GGTTACTAATGGCGCACCTAC 58.792 52.381 10.83 0.00 36.63 3.18
3958 4127 1.832366 TGGTTACTAATGGCGCACCTA 59.168 47.619 10.83 0.00 36.63 3.08
3959 4128 0.616371 TGGTTACTAATGGCGCACCT 59.384 50.000 10.83 0.00 36.63 4.00
3960 4129 1.455248 TTGGTTACTAATGGCGCACC 58.545 50.000 10.83 5.96 0.00 5.01
3961 4130 3.239254 GTTTTGGTTACTAATGGCGCAC 58.761 45.455 10.83 0.00 0.00 5.34
3962 4131 2.885266 TGTTTTGGTTACTAATGGCGCA 59.115 40.909 10.83 0.00 0.00 6.09
3963 4132 3.057806 ACTGTTTTGGTTACTAATGGCGC 60.058 43.478 0.00 0.00 0.00 6.53
3964 4133 4.759516 ACTGTTTTGGTTACTAATGGCG 57.240 40.909 0.00 0.00 0.00 5.69
3965 4134 7.753580 GTCATTACTGTTTTGGTTACTAATGGC 59.246 37.037 0.00 0.00 0.00 4.40
3966 4135 7.960738 CGTCATTACTGTTTTGGTTACTAATGG 59.039 37.037 0.00 0.00 0.00 3.16
3967 4136 7.480542 GCGTCATTACTGTTTTGGTTACTAATG 59.519 37.037 0.00 0.00 0.00 1.90
3968 4137 7.173562 TGCGTCATTACTGTTTTGGTTACTAAT 59.826 33.333 0.00 0.00 0.00 1.73
3969 4138 6.482641 TGCGTCATTACTGTTTTGGTTACTAA 59.517 34.615 0.00 0.00 0.00 2.24
3970 4139 5.990386 TGCGTCATTACTGTTTTGGTTACTA 59.010 36.000 0.00 0.00 0.00 1.82
3971 4140 4.817464 TGCGTCATTACTGTTTTGGTTACT 59.183 37.500 0.00 0.00 0.00 2.24
3972 4141 4.907582 GTGCGTCATTACTGTTTTGGTTAC 59.092 41.667 0.00 0.00 0.00 2.50
3973 4142 4.023878 GGTGCGTCATTACTGTTTTGGTTA 60.024 41.667 0.00 0.00 0.00 2.85
3974 4143 3.243267 GGTGCGTCATTACTGTTTTGGTT 60.243 43.478 0.00 0.00 0.00 3.67
3975 4144 2.292292 GGTGCGTCATTACTGTTTTGGT 59.708 45.455 0.00 0.00 0.00 3.67
3976 4145 2.292016 TGGTGCGTCATTACTGTTTTGG 59.708 45.455 0.00 0.00 0.00 3.28
3977 4146 3.617540 TGGTGCGTCATTACTGTTTTG 57.382 42.857 0.00 0.00 0.00 2.44
3978 4147 3.630312 ACTTGGTGCGTCATTACTGTTTT 59.370 39.130 0.00 0.00 0.00 2.43
3979 4148 3.003275 CACTTGGTGCGTCATTACTGTTT 59.997 43.478 0.00 0.00 0.00 2.83
3980 4149 2.548057 CACTTGGTGCGTCATTACTGTT 59.452 45.455 0.00 0.00 0.00 3.16
3981 4150 2.143122 CACTTGGTGCGTCATTACTGT 58.857 47.619 0.00 0.00 0.00 3.55
3982 4151 2.412870 TCACTTGGTGCGTCATTACTG 58.587 47.619 0.00 0.00 32.98 2.74
3983 4152 2.831685 TCACTTGGTGCGTCATTACT 57.168 45.000 0.00 0.00 32.98 2.24
3984 4153 3.889196 TTTCACTTGGTGCGTCATTAC 57.111 42.857 0.00 0.00 32.98 1.89
3985 4154 3.880490 ACTTTTCACTTGGTGCGTCATTA 59.120 39.130 0.00 0.00 32.98 1.90
3986 4155 2.687935 ACTTTTCACTTGGTGCGTCATT 59.312 40.909 0.00 0.00 32.98 2.57
3987 4156 2.033299 CACTTTTCACTTGGTGCGTCAT 59.967 45.455 0.00 0.00 32.98 3.06
3988 4157 1.400142 CACTTTTCACTTGGTGCGTCA 59.600 47.619 0.00 0.00 32.98 4.35
3989 4158 1.859998 GCACTTTTCACTTGGTGCGTC 60.860 52.381 0.00 0.00 43.91 5.19
3990 4159 0.100503 GCACTTTTCACTTGGTGCGT 59.899 50.000 0.00 0.00 43.91 5.24
3991 4160 2.872028 GCACTTTTCACTTGGTGCG 58.128 52.632 0.00 0.00 43.91 5.34
3993 4162 1.400142 TGACGCACTTTTCACTTGGTG 59.600 47.619 0.00 0.00 34.45 4.17
3994 4163 1.745232 TGACGCACTTTTCACTTGGT 58.255 45.000 0.00 0.00 0.00 3.67
3995 4164 3.354089 AATGACGCACTTTTCACTTGG 57.646 42.857 0.00 0.00 0.00 3.61
3996 4165 7.803189 ACTTAATAATGACGCACTTTTCACTTG 59.197 33.333 0.00 0.00 0.00 3.16
3997 4166 7.871853 ACTTAATAATGACGCACTTTTCACTT 58.128 30.769 0.00 0.00 0.00 3.16
3998 4167 7.435068 ACTTAATAATGACGCACTTTTCACT 57.565 32.000 0.00 0.00 0.00 3.41
3999 4168 8.417176 CAAACTTAATAATGACGCACTTTTCAC 58.583 33.333 0.00 0.00 0.00 3.18
4000 4169 8.346300 TCAAACTTAATAATGACGCACTTTTCA 58.654 29.630 0.00 0.00 0.00 2.69
4001 4170 8.627428 GTCAAACTTAATAATGACGCACTTTTC 58.373 33.333 0.00 0.00 33.62 2.29
4002 4171 7.593644 GGTCAAACTTAATAATGACGCACTTTT 59.406 33.333 0.00 0.00 42.35 2.27
4003 4172 7.081976 GGTCAAACTTAATAATGACGCACTTT 58.918 34.615 0.00 0.00 42.35 2.66
4004 4173 6.205853 TGGTCAAACTTAATAATGACGCACTT 59.794 34.615 0.00 0.00 42.35 3.16
4005 4174 5.703592 TGGTCAAACTTAATAATGACGCACT 59.296 36.000 0.00 0.00 42.35 4.40
4006 4175 5.933790 TGGTCAAACTTAATAATGACGCAC 58.066 37.500 0.00 0.00 42.35 5.34
4007 4176 6.348950 CCTTGGTCAAACTTAATAATGACGCA 60.349 38.462 0.00 0.00 42.35 5.24
4008 4177 6.027749 CCTTGGTCAAACTTAATAATGACGC 58.972 40.000 0.00 0.00 42.35 5.19
4009 4178 7.141100 ACCTTGGTCAAACTTAATAATGACG 57.859 36.000 0.00 0.00 42.35 4.35
4010 4179 9.191995 CAAACCTTGGTCAAACTTAATAATGAC 57.808 33.333 0.00 0.00 41.06 3.06
4011 4180 9.137459 TCAAACCTTGGTCAAACTTAATAATGA 57.863 29.630 0.00 0.00 0.00 2.57
4012 4181 9.191995 GTCAAACCTTGGTCAAACTTAATAATG 57.808 33.333 0.00 0.00 0.00 1.90
4013 4182 8.364894 GGTCAAACCTTGGTCAAACTTAATAAT 58.635 33.333 0.00 0.00 34.73 1.28
4014 4183 7.718525 GGTCAAACCTTGGTCAAACTTAATAA 58.281 34.615 0.00 0.00 34.73 1.40
4015 4184 7.279750 GGTCAAACCTTGGTCAAACTTAATA 57.720 36.000 0.00 0.00 34.73 0.98
4016 4185 6.156748 GGTCAAACCTTGGTCAAACTTAAT 57.843 37.500 0.00 0.00 34.73 1.40
4017 4186 5.585820 GGTCAAACCTTGGTCAAACTTAA 57.414 39.130 0.00 0.00 34.73 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.