Multiple sequence alignment - TraesCS2D01G470400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G470400 chr2D 100.000 3029 0 0 1 3029 574821069 574818041 0.000000e+00 5594.0
1 TraesCS2D01G470400 chr2B 91.982 1746 70 30 476 2182 690966878 690968592 0.000000e+00 2385.0
2 TraesCS2D01G470400 chr2B 92.838 377 17 6 2182 2551 690968685 690969058 3.440000e-149 538.0
3 TraesCS2D01G470400 chr2B 91.545 343 18 2 64 406 690943676 690943345 2.130000e-126 462.0
4 TraesCS2D01G470400 chr2B 90.390 333 20 4 1 333 690957015 690956695 7.760000e-116 427.0
5 TraesCS2D01G470400 chr2B 95.808 167 7 0 315 481 690965478 690965644 1.380000e-68 270.0
6 TraesCS2D01G470400 chr2B 94.828 116 6 0 406 521 690943101 690942986 6.670000e-42 182.0
7 TraesCS2D01G470400 chr2A 94.103 1221 57 8 973 2193 713143477 713142272 0.000000e+00 1842.0
8 TraesCS2D01G470400 chr2A 90.526 380 17 10 2185 2551 713140011 713139638 4.540000e-133 484.0
9 TraesCS2D01G470400 chr2A 90.064 312 21 6 190 500 713145272 713144970 2.190000e-106 396.0
10 TraesCS2D01G470400 chr2A 88.393 112 7 3 489 600 713144957 713144852 2.450000e-26 130.0
11 TraesCS2D01G470400 chr2A 80.214 187 8 8 661 847 713143722 713143565 2.470000e-21 113.0
12 TraesCS2D01G470400 chr7A 88.660 485 36 14 2553 3029 717606421 717605948 9.420000e-160 573.0
13 TraesCS2D01G470400 chr3D 87.755 490 42 13 2547 3029 6856831 6856353 9.490000e-155 556.0
14 TraesCS2D01G470400 chrUn 97.143 35 1 0 1498 1532 47836146 47836112 3.260000e-05 60.2
15 TraesCS2D01G470400 chr1B 88.636 44 5 0 1498 1541 595638332 595638289 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G470400 chr2D 574818041 574821069 3028 True 5594.000000 5594 100.000000 1 3029 1 chr2D.!!$R1 3028
1 TraesCS2D01G470400 chr2B 690965478 690969058 3580 False 1064.333333 2385 93.542667 315 2551 3 chr2B.!!$F1 2236
2 TraesCS2D01G470400 chr2B 690942986 690943676 690 True 322.000000 462 93.186500 64 521 2 chr2B.!!$R2 457
3 TraesCS2D01G470400 chr2A 713139638 713145272 5634 True 593.000000 1842 88.660000 190 2551 5 chr2A.!!$R1 2361

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.036388 TTCGGCTGGACCAACTCATC 60.036 55.0 0.0 0.0 39.03 2.92 F
1770 4407 0.319900 TGAACAAGTCGCTGGAGAGC 60.320 55.0 0.0 0.0 42.37 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1882 4519 0.106469 TACTGCAGTTTGGCCACCAA 60.106 50.0 27.06 0.0 42.29 3.67 R
2763 7681 0.038526 ACTTCGTTCTACGCCAGGTG 60.039 55.0 0.00 0.0 42.21 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.534729 GAAATTCGGCTGGACCAACT 58.465 50.000 0.00 0.00 39.03 3.16
20 21 1.468914 GAAATTCGGCTGGACCAACTC 59.531 52.381 0.00 0.00 39.03 3.01
21 22 0.400213 AATTCGGCTGGACCAACTCA 59.600 50.000 0.00 0.00 39.03 3.41
22 23 0.620556 ATTCGGCTGGACCAACTCAT 59.379 50.000 0.00 0.00 39.03 2.90
23 24 0.036388 TTCGGCTGGACCAACTCATC 60.036 55.000 0.00 0.00 39.03 2.92
24 25 1.450312 CGGCTGGACCAACTCATCC 60.450 63.158 0.00 0.00 39.03 3.51
25 26 1.077429 GGCTGGACCAACTCATCCC 60.077 63.158 0.00 0.00 38.86 3.85
26 27 1.685224 GCTGGACCAACTCATCCCA 59.315 57.895 0.00 0.00 33.69 4.37
27 28 0.678048 GCTGGACCAACTCATCCCAC 60.678 60.000 0.00 0.00 33.69 4.61
28 29 0.987294 CTGGACCAACTCATCCCACT 59.013 55.000 0.00 0.00 33.69 4.00
29 30 1.352352 CTGGACCAACTCATCCCACTT 59.648 52.381 0.00 0.00 33.69 3.16
30 31 1.351017 TGGACCAACTCATCCCACTTC 59.649 52.381 0.00 0.00 33.69 3.01
31 32 1.340114 GGACCAACTCATCCCACTTCC 60.340 57.143 0.00 0.00 0.00 3.46
32 33 1.351017 GACCAACTCATCCCACTTCCA 59.649 52.381 0.00 0.00 0.00 3.53
33 34 1.073923 ACCAACTCATCCCACTTCCAC 59.926 52.381 0.00 0.00 0.00 4.02
34 35 1.442769 CAACTCATCCCACTTCCACG 58.557 55.000 0.00 0.00 0.00 4.94
35 36 0.321653 AACTCATCCCACTTCCACGC 60.322 55.000 0.00 0.00 0.00 5.34
36 37 1.450312 CTCATCCCACTTCCACGCC 60.450 63.158 0.00 0.00 0.00 5.68
37 38 2.819595 CATCCCACTTCCACGCCG 60.820 66.667 0.00 0.00 0.00 6.46
38 39 3.319198 ATCCCACTTCCACGCCGT 61.319 61.111 0.00 0.00 0.00 5.68
39 40 3.605749 ATCCCACTTCCACGCCGTG 62.606 63.158 10.95 10.95 0.00 4.94
40 41 4.308458 CCCACTTCCACGCCGTGA 62.308 66.667 20.57 1.68 35.23 4.35
41 42 2.738521 CCACTTCCACGCCGTGAG 60.739 66.667 20.57 11.70 35.23 3.51
42 43 3.414700 CACTTCCACGCCGTGAGC 61.415 66.667 20.57 0.00 35.23 4.26
54 55 4.500116 GTGAGCGCCGTCTCCCTC 62.500 72.222 2.29 0.00 32.22 4.30
58 59 4.899239 GCGCCGTCTCCCTCCATG 62.899 72.222 0.00 0.00 0.00 3.66
59 60 4.899239 CGCCGTCTCCCTCCATGC 62.899 72.222 0.00 0.00 0.00 4.06
60 61 3.785859 GCCGTCTCCCTCCATGCA 61.786 66.667 0.00 0.00 0.00 3.96
61 62 2.187946 CCGTCTCCCTCCATGCAC 59.812 66.667 0.00 0.00 0.00 4.57
62 63 2.187946 CGTCTCCCTCCATGCACC 59.812 66.667 0.00 0.00 0.00 5.01
84 85 0.459585 GGTCGCCTTCGCTTATGTGA 60.460 55.000 0.00 0.00 35.26 3.58
88 89 1.009829 GCCTTCGCTTATGTGACCTG 58.990 55.000 0.00 0.00 31.77 4.00
112 113 2.278206 CGTCACGCCTCGATGGAG 60.278 66.667 0.00 0.00 41.69 3.86
120 121 2.202987 CTCGATGGAGGGCAGTGC 60.203 66.667 6.55 6.55 36.61 4.40
121 122 4.147449 TCGATGGAGGGCAGTGCG 62.147 66.667 9.45 0.00 0.00 5.34
186 187 8.893563 TTACTCCCCTCAATAATTCAATTTGT 57.106 30.769 0.00 0.00 0.00 2.83
194 195 8.928733 CCTCAATAATTCAATTTGTCTGTTTGG 58.071 33.333 0.00 0.00 0.00 3.28
211 212 7.330946 GTCTGTTTGGCCCTGTAAATAAAATTC 59.669 37.037 0.00 0.00 0.00 2.17
275 277 3.382546 GTGATGCCTTACAAGCCATCAAT 59.617 43.478 15.02 0.00 33.05 2.57
622 3207 4.038162 TGCTTAATTACCAAACACACCCAC 59.962 41.667 0.00 0.00 0.00 4.61
642 3227 2.080693 CGTGAGTCAGAGTAGACAGCT 58.919 52.381 0.00 0.00 40.98 4.24
789 3374 3.120923 CCAAAAATGTGCTTCATTCACGC 60.121 43.478 7.82 0.00 44.85 5.34
830 3418 6.421501 CAGCTGCACAAATTAATCTGAAAACA 59.578 34.615 0.00 0.00 0.00 2.83
831 3419 6.643770 AGCTGCACAAATTAATCTGAAAACAG 59.356 34.615 1.02 0.00 0.00 3.16
832 3420 6.128742 GCTGCACAAATTAATCTGAAAACAGG 60.129 38.462 0.00 0.00 0.00 4.00
833 3421 5.695816 TGCACAAATTAATCTGAAAACAGGC 59.304 36.000 0.00 0.00 0.00 4.85
834 3422 5.695816 GCACAAATTAATCTGAAAACAGGCA 59.304 36.000 0.00 0.00 0.00 4.75
835 3423 6.128742 GCACAAATTAATCTGAAAACAGGCAG 60.129 38.462 0.00 0.00 0.00 4.85
836 3424 6.366877 CACAAATTAATCTGAAAACAGGCAGG 59.633 38.462 0.00 0.00 33.05 4.85
837 3425 4.725790 ATTAATCTGAAAACAGGCAGGC 57.274 40.909 0.00 0.00 33.05 4.85
838 3426 1.999648 AATCTGAAAACAGGCAGGCA 58.000 45.000 0.00 0.00 33.05 4.75
839 3427 1.542492 ATCTGAAAACAGGCAGGCAG 58.458 50.000 0.00 0.00 33.05 4.85
840 3428 0.538057 TCTGAAAACAGGCAGGCAGG 60.538 55.000 0.00 0.00 33.05 4.85
841 3429 2.151049 CTGAAAACAGGCAGGCAGGC 62.151 60.000 0.00 0.00 44.61 4.85
897 3488 4.679662 CATGCAGTTTCTGATTTCCCATC 58.320 43.478 0.00 0.00 32.44 3.51
900 3491 5.569355 TGCAGTTTCTGATTTCCCATCTTA 58.431 37.500 0.66 0.00 32.44 2.10
905 3496 8.239998 CAGTTTCTGATTTCCCATCTTAGTTTC 58.760 37.037 0.00 0.00 32.44 2.78
966 3597 2.808523 TCATCATCTCACTCGCCATC 57.191 50.000 0.00 0.00 0.00 3.51
967 3598 1.342496 TCATCATCTCACTCGCCATCC 59.658 52.381 0.00 0.00 0.00 3.51
968 3599 1.069668 CATCATCTCACTCGCCATCCA 59.930 52.381 0.00 0.00 0.00 3.41
969 3600 1.417288 TCATCTCACTCGCCATCCAT 58.583 50.000 0.00 0.00 0.00 3.41
970 3601 2.597455 TCATCTCACTCGCCATCCATA 58.403 47.619 0.00 0.00 0.00 2.74
971 3602 3.168292 TCATCTCACTCGCCATCCATAT 58.832 45.455 0.00 0.00 0.00 1.78
972 3603 3.194329 TCATCTCACTCGCCATCCATATC 59.806 47.826 0.00 0.00 0.00 1.63
973 3604 1.895798 TCTCACTCGCCATCCATATCC 59.104 52.381 0.00 0.00 0.00 2.59
974 3605 1.620323 CTCACTCGCCATCCATATCCA 59.380 52.381 0.00 0.00 0.00 3.41
975 3606 2.235650 CTCACTCGCCATCCATATCCAT 59.764 50.000 0.00 0.00 0.00 3.41
1009 3640 0.671781 AGATATGAAGATGCGCGCCC 60.672 55.000 30.77 20.46 0.00 6.13
1411 4048 1.266989 GGCTTTCCAACCTCAACTTCG 59.733 52.381 0.00 0.00 0.00 3.79
1565 4202 1.720694 CTCTCCTTCCTCGACCTCGC 61.721 65.000 0.00 0.00 39.60 5.03
1769 4406 1.671261 CCTGAACAAGTCGCTGGAGAG 60.671 57.143 0.00 0.00 0.00 3.20
1770 4407 0.319900 TGAACAAGTCGCTGGAGAGC 60.320 55.000 0.00 0.00 42.37 4.09
1788 4425 2.434884 CTGGACCTGTCGCGCAAT 60.435 61.111 8.75 0.00 0.00 3.56
1855 4492 0.448990 CATGTTGGACATCAGCCACG 59.551 55.000 0.00 0.00 36.53 4.94
1871 4508 2.572647 CGACGACGTCTACGGTGC 60.573 66.667 24.36 0.00 44.95 5.01
1998 4635 0.108585 TCCAGCACAACAAGGGACTC 59.891 55.000 0.00 0.00 38.49 3.36
2037 4677 1.406219 CCTGCAAGTGATCGTCGTCG 61.406 60.000 0.00 0.00 38.55 5.12
2038 4678 0.729478 CTGCAAGTGATCGTCGTCGT 60.729 55.000 1.33 0.00 38.33 4.34
2039 4679 0.728129 TGCAAGTGATCGTCGTCGTC 60.728 55.000 1.33 0.38 38.33 4.20
2040 4680 0.454620 GCAAGTGATCGTCGTCGTCT 60.455 55.000 1.33 0.00 38.33 4.18
2041 4681 1.525596 CAAGTGATCGTCGTCGTCTC 58.474 55.000 1.33 1.71 38.33 3.36
2042 4682 1.136057 CAAGTGATCGTCGTCGTCTCA 60.136 52.381 1.33 4.24 38.33 3.27
2043 4683 0.722282 AGTGATCGTCGTCGTCTCAG 59.278 55.000 1.33 0.00 38.33 3.35
2044 4684 0.858135 GTGATCGTCGTCGTCTCAGC 60.858 60.000 1.33 0.03 38.33 4.26
2060 4700 1.000486 AGCCGACTAGCTCCTCCAA 60.000 57.895 0.00 0.00 39.48 3.53
2073 4713 4.409247 AGCTCCTCCAACCGTAATCTAATT 59.591 41.667 0.00 0.00 0.00 1.40
2074 4714 4.750598 GCTCCTCCAACCGTAATCTAATTC 59.249 45.833 0.00 0.00 0.00 2.17
2075 4715 5.453480 GCTCCTCCAACCGTAATCTAATTCT 60.453 44.000 0.00 0.00 0.00 2.40
2076 4716 6.239232 GCTCCTCCAACCGTAATCTAATTCTA 60.239 42.308 0.00 0.00 0.00 2.10
2077 4717 7.664552 TCCTCCAACCGTAATCTAATTCTAA 57.335 36.000 0.00 0.00 0.00 2.10
2078 4718 8.258850 TCCTCCAACCGTAATCTAATTCTAAT 57.741 34.615 0.00 0.00 0.00 1.73
2129 4769 9.707957 TCTTTAAGGAATAATAAAAGCATCCCA 57.292 29.630 0.00 0.00 0.00 4.37
2139 4779 2.386661 AAGCATCCCACTTCAGTACG 57.613 50.000 0.00 0.00 0.00 3.67
2157 4797 5.515626 CAGTACGGTAATGCTTCTTACTGTC 59.484 44.000 16.77 11.42 44.18 3.51
2249 7158 5.490139 CATGTTATGCTCAAGTAAGGTGG 57.510 43.478 0.00 0.00 0.00 4.61
2250 7159 4.634012 TGTTATGCTCAAGTAAGGTGGT 57.366 40.909 0.00 0.00 0.00 4.16
2254 7163 1.347707 TGCTCAAGTAAGGTGGTCCAG 59.652 52.381 0.00 0.00 35.89 3.86
2260 7169 4.595781 TCAAGTAAGGTGGTCCAGTAACAT 59.404 41.667 0.00 0.00 35.89 2.71
2359 7275 4.816925 ACTTCTGTCCTGCTGTTTCTTTAC 59.183 41.667 0.00 0.00 0.00 2.01
2378 7294 6.368791 TCTTTACGTTCCAAGTCTGATTCATG 59.631 38.462 0.00 0.00 0.00 3.07
2441 7358 3.316588 TGCAACGCTATTTCTTGTTGGAA 59.683 39.130 6.14 0.00 39.25 3.53
2591 7509 7.856145 GAGCTCTCTCTTTGATTTCCATTAA 57.144 36.000 6.43 0.00 36.42 1.40
2592 7510 7.862512 AGCTCTCTCTTTGATTTCCATTAAG 57.137 36.000 0.00 0.00 0.00 1.85
2593 7511 7.628234 AGCTCTCTCTTTGATTTCCATTAAGA 58.372 34.615 0.00 0.00 0.00 2.10
2594 7512 7.769970 AGCTCTCTCTTTGATTTCCATTAAGAG 59.230 37.037 0.00 0.00 41.86 2.85
2595 7513 7.768120 GCTCTCTCTTTGATTTCCATTAAGAGA 59.232 37.037 11.15 11.15 45.01 3.10
2596 7514 9.664332 CTCTCTCTTTGATTTCCATTAAGAGAA 57.336 33.333 12.33 5.26 45.88 2.87
2606 7524 6.455360 TTCCATTAAGAGAAATCACCATGC 57.545 37.500 0.00 0.00 0.00 4.06
2607 7525 4.889409 TCCATTAAGAGAAATCACCATGCC 59.111 41.667 0.00 0.00 0.00 4.40
2608 7526 4.891756 CCATTAAGAGAAATCACCATGCCT 59.108 41.667 0.00 0.00 0.00 4.75
2609 7527 5.361857 CCATTAAGAGAAATCACCATGCCTT 59.638 40.000 0.00 0.00 0.00 4.35
2610 7528 6.547141 CCATTAAGAGAAATCACCATGCCTTA 59.453 38.462 0.00 0.00 0.00 2.69
2611 7529 7.420800 CATTAAGAGAAATCACCATGCCTTAC 58.579 38.462 0.00 0.00 0.00 2.34
2612 7530 4.574674 AGAGAAATCACCATGCCTTACA 57.425 40.909 0.00 0.00 0.00 2.41
2613 7531 4.521146 AGAGAAATCACCATGCCTTACAG 58.479 43.478 0.00 0.00 0.00 2.74
2614 7532 4.225942 AGAGAAATCACCATGCCTTACAGA 59.774 41.667 0.00 0.00 0.00 3.41
2615 7533 4.521146 AGAAATCACCATGCCTTACAGAG 58.479 43.478 0.00 0.00 0.00 3.35
2652 7570 9.649167 AAAACATAAAGCTACTACAACGTATCT 57.351 29.630 0.00 0.00 0.00 1.98
2653 7571 8.853469 AACATAAAGCTACTACAACGTATCTC 57.147 34.615 0.00 0.00 0.00 2.75
2654 7572 8.223177 ACATAAAGCTACTACAACGTATCTCT 57.777 34.615 0.00 0.00 0.00 3.10
2655 7573 8.129840 ACATAAAGCTACTACAACGTATCTCTG 58.870 37.037 0.00 0.00 0.00 3.35
2656 7574 4.555348 AGCTACTACAACGTATCTCTGC 57.445 45.455 0.00 0.00 0.00 4.26
2657 7575 3.002451 AGCTACTACAACGTATCTCTGCG 59.998 47.826 0.00 0.00 36.47 5.18
2658 7576 3.002042 GCTACTACAACGTATCTCTGCGA 59.998 47.826 0.00 0.00 34.31 5.10
2659 7577 4.495349 GCTACTACAACGTATCTCTGCGAA 60.495 45.833 0.00 0.00 34.31 4.70
2660 7578 4.017380 ACTACAACGTATCTCTGCGAAG 57.983 45.455 0.00 0.00 34.31 3.79
2661 7579 3.688185 ACTACAACGTATCTCTGCGAAGA 59.312 43.478 0.00 0.00 34.31 2.87
2662 7580 3.138205 ACAACGTATCTCTGCGAAGAG 57.862 47.619 14.91 14.91 37.28 2.85
2670 7588 5.293324 CGTATCTCTGCGAAGAGCTAGATAT 59.707 44.000 16.30 5.44 44.86 1.63
2671 7589 6.183360 CGTATCTCTGCGAAGAGCTAGATATT 60.183 42.308 16.30 0.00 44.86 1.28
2672 7590 6.966632 GTATCTCTGCGAAGAGCTAGATATTG 59.033 42.308 16.30 0.00 44.86 1.90
2673 7591 7.148323 GTATCTCTGCGAAGAGCTAGATATTGA 60.148 40.741 16.30 0.00 44.86 2.57
2676 7594 3.843999 GCGAAGAGCTAGATATTGAGGG 58.156 50.000 0.00 0.00 44.04 4.30
2677 7595 3.508012 GCGAAGAGCTAGATATTGAGGGA 59.492 47.826 0.00 0.00 44.04 4.20
2678 7596 4.380444 GCGAAGAGCTAGATATTGAGGGAG 60.380 50.000 0.00 0.00 44.04 4.30
2679 7597 4.157656 CGAAGAGCTAGATATTGAGGGAGG 59.842 50.000 0.00 0.00 0.00 4.30
2680 7598 4.059773 AGAGCTAGATATTGAGGGAGGG 57.940 50.000 0.00 0.00 0.00 4.30
2681 7599 3.103742 GAGCTAGATATTGAGGGAGGGG 58.896 54.545 0.00 0.00 0.00 4.79
2682 7600 2.192263 GCTAGATATTGAGGGAGGGGG 58.808 57.143 0.00 0.00 0.00 5.40
2683 7601 2.225650 GCTAGATATTGAGGGAGGGGGA 60.226 54.545 0.00 0.00 0.00 4.81
2684 7602 3.762128 GCTAGATATTGAGGGAGGGGGAA 60.762 52.174 0.00 0.00 0.00 3.97
2685 7603 3.455085 AGATATTGAGGGAGGGGGAAA 57.545 47.619 0.00 0.00 0.00 3.13
2686 7604 3.331120 AGATATTGAGGGAGGGGGAAAG 58.669 50.000 0.00 0.00 0.00 2.62
2687 7605 1.222567 TATTGAGGGAGGGGGAAAGC 58.777 55.000 0.00 0.00 0.00 3.51
2688 7606 1.584717 ATTGAGGGAGGGGGAAAGCC 61.585 60.000 0.00 0.00 0.00 4.35
2689 7607 2.614013 GAGGGAGGGGGAAAGCCA 60.614 66.667 0.00 0.00 35.15 4.75
2690 7608 2.941583 AGGGAGGGGGAAAGCCAC 60.942 66.667 0.00 0.00 36.60 5.01
2709 7627 2.854076 CCCCCTCCCATATTGGCC 59.146 66.667 0.00 0.00 35.79 5.36
2710 7628 2.854076 CCCCTCCCATATTGGCCC 59.146 66.667 0.00 0.00 35.79 5.80
2711 7629 2.854076 CCCTCCCATATTGGCCCC 59.146 66.667 0.00 0.00 35.79 5.80
2712 7630 2.854076 CCTCCCATATTGGCCCCC 59.146 66.667 0.00 0.00 35.79 5.40
2713 7631 2.090644 CCTCCCATATTGGCCCCCA 61.091 63.158 0.00 0.00 35.79 4.96
2721 7639 4.553687 TTGGCCCCCAAAGCAGCA 62.554 61.111 0.00 0.00 40.92 4.41
2725 7643 2.677875 CCCCCAAAGCAGCACCTC 60.678 66.667 0.00 0.00 0.00 3.85
2726 7644 2.115910 CCCCAAAGCAGCACCTCA 59.884 61.111 0.00 0.00 0.00 3.86
2727 7645 2.270986 CCCCAAAGCAGCACCTCAC 61.271 63.158 0.00 0.00 0.00 3.51
2728 7646 1.529010 CCCAAAGCAGCACCTCACA 60.529 57.895 0.00 0.00 0.00 3.58
2729 7647 1.108727 CCCAAAGCAGCACCTCACAA 61.109 55.000 0.00 0.00 0.00 3.33
2730 7648 0.313043 CCAAAGCAGCACCTCACAAG 59.687 55.000 0.00 0.00 0.00 3.16
2731 7649 1.311859 CAAAGCAGCACCTCACAAGA 58.688 50.000 0.00 0.00 0.00 3.02
2732 7650 1.266175 CAAAGCAGCACCTCACAAGAG 59.734 52.381 0.00 0.00 41.72 2.85
2733 7651 0.761187 AAGCAGCACCTCACAAGAGA 59.239 50.000 0.00 0.00 44.98 3.10
2734 7652 0.982704 AGCAGCACCTCACAAGAGAT 59.017 50.000 0.00 0.00 44.98 2.75
2735 7653 1.066286 AGCAGCACCTCACAAGAGATC 60.066 52.381 0.00 0.00 44.98 2.75
2736 7654 1.066286 GCAGCACCTCACAAGAGATCT 60.066 52.381 0.00 0.00 44.98 2.75
2737 7655 2.167281 GCAGCACCTCACAAGAGATCTA 59.833 50.000 0.00 0.00 44.98 1.98
2738 7656 3.368843 GCAGCACCTCACAAGAGATCTAA 60.369 47.826 0.00 0.00 44.98 2.10
2739 7657 4.431809 CAGCACCTCACAAGAGATCTAAG 58.568 47.826 0.00 0.00 44.98 2.18
2740 7658 3.450457 AGCACCTCACAAGAGATCTAAGG 59.550 47.826 0.00 0.00 44.98 2.69
2741 7659 3.791245 CACCTCACAAGAGATCTAAGGC 58.209 50.000 0.00 0.00 44.98 4.35
2742 7660 2.769095 ACCTCACAAGAGATCTAAGGCC 59.231 50.000 0.00 0.00 44.98 5.19
2743 7661 3.037549 CCTCACAAGAGATCTAAGGCCT 58.962 50.000 0.00 0.00 44.98 5.19
2744 7662 3.181467 CCTCACAAGAGATCTAAGGCCTG 60.181 52.174 5.69 0.00 44.98 4.85
2745 7663 2.768527 TCACAAGAGATCTAAGGCCTGG 59.231 50.000 5.69 2.11 0.00 4.45
2746 7664 2.122768 ACAAGAGATCTAAGGCCTGGG 58.877 52.381 5.69 1.66 0.00 4.45
2747 7665 1.135960 AAGAGATCTAAGGCCTGGGC 58.864 55.000 5.69 13.15 41.06 5.36
2748 7666 0.267356 AGAGATCTAAGGCCTGGGCT 59.733 55.000 18.27 18.27 41.24 5.19
2749 7667 0.684535 GAGATCTAAGGCCTGGGCTC 59.315 60.000 24.18 10.74 37.50 4.70
2750 7668 1.118356 AGATCTAAGGCCTGGGCTCG 61.118 60.000 24.18 16.99 37.50 5.03
2751 7669 1.075226 ATCTAAGGCCTGGGCTCGA 60.075 57.895 24.18 21.42 37.50 4.04
2752 7670 0.691078 ATCTAAGGCCTGGGCTCGAA 60.691 55.000 24.18 11.70 37.50 3.71
2753 7671 1.153349 CTAAGGCCTGGGCTCGAAC 60.153 63.158 24.18 0.00 37.50 3.95
2754 7672 1.899437 CTAAGGCCTGGGCTCGAACA 61.899 60.000 24.18 5.85 37.50 3.18
2755 7673 1.899437 TAAGGCCTGGGCTCGAACAG 61.899 60.000 24.18 4.86 37.50 3.16
2759 7677 2.266055 CTGGGCTCGAACAGGTCC 59.734 66.667 4.08 0.00 0.00 4.46
2760 7678 3.316573 CTGGGCTCGAACAGGTCCC 62.317 68.421 4.08 0.00 37.49 4.46
2761 7679 3.319198 GGGCTCGAACAGGTCCCA 61.319 66.667 0.00 0.00 36.96 4.37
2762 7680 2.266055 GGCTCGAACAGGTCCCAG 59.734 66.667 0.00 0.00 0.00 4.45
2763 7681 2.435059 GCTCGAACAGGTCCCAGC 60.435 66.667 0.00 0.00 0.00 4.85
2764 7682 3.059982 CTCGAACAGGTCCCAGCA 58.940 61.111 0.00 0.00 0.00 4.41
2765 7683 1.374758 CTCGAACAGGTCCCAGCAC 60.375 63.158 0.00 0.00 0.00 4.40
2766 7684 2.358737 CGAACAGGTCCCAGCACC 60.359 66.667 0.00 0.00 36.58 5.01
2779 7697 2.260434 GCACCTGGCGTAGAACGA 59.740 61.111 3.22 0.00 46.05 3.85
2780 7698 1.373748 GCACCTGGCGTAGAACGAA 60.374 57.895 3.22 0.00 46.05 3.85
2781 7699 1.352156 GCACCTGGCGTAGAACGAAG 61.352 60.000 3.22 0.07 46.05 3.79
2801 7719 8.713737 ACGAAGTTTTAGAAACAGAAAGTAGT 57.286 30.769 6.35 0.00 37.78 2.73
2802 7720 9.159364 ACGAAGTTTTAGAAACAGAAAGTAGTT 57.841 29.630 6.35 0.00 37.78 2.24
2803 7721 9.634300 CGAAGTTTTAGAAACAGAAAGTAGTTC 57.366 33.333 6.35 0.00 36.38 3.01
2810 7728 7.793927 AGAAACAGAAAGTAGTTCAAAGAGG 57.206 36.000 0.00 0.00 38.86 3.69
2811 7729 6.261158 AGAAACAGAAAGTAGTTCAAAGAGGC 59.739 38.462 0.00 0.00 38.86 4.70
2812 7730 5.036117 ACAGAAAGTAGTTCAAAGAGGCA 57.964 39.130 0.00 0.00 38.86 4.75
2813 7731 5.437060 ACAGAAAGTAGTTCAAAGAGGCAA 58.563 37.500 0.00 0.00 38.86 4.52
2814 7732 5.297029 ACAGAAAGTAGTTCAAAGAGGCAAC 59.703 40.000 0.00 0.00 38.86 4.17
2815 7733 5.296780 CAGAAAGTAGTTCAAAGAGGCAACA 59.703 40.000 0.00 0.00 38.86 3.33
2816 7734 6.016777 CAGAAAGTAGTTCAAAGAGGCAACAT 60.017 38.462 0.00 0.00 38.86 2.71
2817 7735 7.173218 CAGAAAGTAGTTCAAAGAGGCAACATA 59.827 37.037 0.00 0.00 38.86 2.29
2818 7736 7.389053 AGAAAGTAGTTCAAAGAGGCAACATAG 59.611 37.037 0.00 0.00 38.86 2.23
2819 7737 6.360370 AGTAGTTCAAAGAGGCAACATAGA 57.640 37.500 0.00 0.00 41.41 1.98
2820 7738 6.166982 AGTAGTTCAAAGAGGCAACATAGAC 58.833 40.000 0.00 0.00 41.41 2.59
2821 7739 4.973168 AGTTCAAAGAGGCAACATAGACA 58.027 39.130 0.00 0.00 41.41 3.41
2822 7740 4.999950 AGTTCAAAGAGGCAACATAGACAG 59.000 41.667 0.00 0.00 41.41 3.51
2823 7741 3.338249 TCAAAGAGGCAACATAGACAGC 58.662 45.455 0.00 0.00 41.41 4.40
2827 7745 3.086733 GGCAACATAGACAGCCCTC 57.913 57.895 0.00 0.00 41.25 4.30
2828 7746 0.464554 GGCAACATAGACAGCCCTCC 60.465 60.000 0.00 0.00 41.25 4.30
2829 7747 0.543749 GCAACATAGACAGCCCTCCT 59.456 55.000 0.00 0.00 0.00 3.69
2830 7748 1.474143 GCAACATAGACAGCCCTCCTC 60.474 57.143 0.00 0.00 0.00 3.71
2831 7749 2.114616 CAACATAGACAGCCCTCCTCT 58.885 52.381 0.00 0.00 0.00 3.69
2832 7750 3.300388 CAACATAGACAGCCCTCCTCTA 58.700 50.000 0.00 0.00 0.00 2.43
2833 7751 3.689872 ACATAGACAGCCCTCCTCTAA 57.310 47.619 0.00 0.00 0.00 2.10
2834 7752 3.995636 ACATAGACAGCCCTCCTCTAAA 58.004 45.455 0.00 0.00 0.00 1.85
2835 7753 3.707102 ACATAGACAGCCCTCCTCTAAAC 59.293 47.826 0.00 0.00 0.00 2.01
2836 7754 2.327325 AGACAGCCCTCCTCTAAACA 57.673 50.000 0.00 0.00 0.00 2.83
2837 7755 2.183679 AGACAGCCCTCCTCTAAACAG 58.816 52.381 0.00 0.00 0.00 3.16
2838 7756 1.208293 GACAGCCCTCCTCTAAACAGG 59.792 57.143 0.00 0.00 34.40 4.00
2839 7757 1.280457 CAGCCCTCCTCTAAACAGGT 58.720 55.000 0.00 0.00 34.76 4.00
2840 7758 2.225547 ACAGCCCTCCTCTAAACAGGTA 60.226 50.000 0.00 0.00 34.76 3.08
2841 7759 3.041946 CAGCCCTCCTCTAAACAGGTAT 58.958 50.000 0.00 0.00 34.76 2.73
2842 7760 3.070302 CAGCCCTCCTCTAAACAGGTATC 59.930 52.174 0.00 0.00 34.76 2.24
2843 7761 2.369203 GCCCTCCTCTAAACAGGTATCC 59.631 54.545 0.00 0.00 34.76 2.59
2844 7762 3.654273 CCCTCCTCTAAACAGGTATCCA 58.346 50.000 0.00 0.00 34.76 3.41
2845 7763 4.235372 CCCTCCTCTAAACAGGTATCCAT 58.765 47.826 0.00 0.00 34.76 3.41
2846 7764 4.284746 CCCTCCTCTAAACAGGTATCCATC 59.715 50.000 0.00 0.00 34.76 3.51
2847 7765 4.901849 CCTCCTCTAAACAGGTATCCATCA 59.098 45.833 0.00 0.00 34.76 3.07
2848 7766 5.545723 CCTCCTCTAAACAGGTATCCATCAT 59.454 44.000 0.00 0.00 34.76 2.45
2849 7767 6.295575 CCTCCTCTAAACAGGTATCCATCATC 60.296 46.154 0.00 0.00 34.76 2.92
2850 7768 6.143206 TCCTCTAAACAGGTATCCATCATCA 58.857 40.000 0.00 0.00 34.76 3.07
2851 7769 6.789457 TCCTCTAAACAGGTATCCATCATCAT 59.211 38.462 0.00 0.00 34.76 2.45
2852 7770 7.955750 TCCTCTAAACAGGTATCCATCATCATA 59.044 37.037 0.00 0.00 34.76 2.15
2853 7771 8.037758 CCTCTAAACAGGTATCCATCATCATAC 58.962 40.741 0.00 0.00 0.00 2.39
2854 7772 8.491045 TCTAAACAGGTATCCATCATCATACA 57.509 34.615 0.00 0.00 0.00 2.29
2855 7773 9.104713 TCTAAACAGGTATCCATCATCATACAT 57.895 33.333 0.00 0.00 0.00 2.29
2856 7774 9.730705 CTAAACAGGTATCCATCATCATACATT 57.269 33.333 0.00 0.00 0.00 2.71
2858 7776 9.425248 AAACAGGTATCCATCATCATACATTTT 57.575 29.630 0.00 0.00 0.00 1.82
2859 7777 9.425248 AACAGGTATCCATCATCATACATTTTT 57.575 29.630 0.00 0.00 0.00 1.94
2867 7785 9.970395 TCCATCATCATACATTTTTATTTCTGC 57.030 29.630 0.00 0.00 0.00 4.26
2868 7786 9.199982 CCATCATCATACATTTTTATTTCTGCC 57.800 33.333 0.00 0.00 0.00 4.85
2869 7787 9.199982 CATCATCATACATTTTTATTTCTGCCC 57.800 33.333 0.00 0.00 0.00 5.36
2870 7788 7.725251 TCATCATACATTTTTATTTCTGCCCC 58.275 34.615 0.00 0.00 0.00 5.80
2871 7789 6.142818 TCATACATTTTTATTTCTGCCCCG 57.857 37.500 0.00 0.00 0.00 5.73
2872 7790 5.888724 TCATACATTTTTATTTCTGCCCCGA 59.111 36.000 0.00 0.00 0.00 5.14
2873 7791 4.718940 ACATTTTTATTTCTGCCCCGAG 57.281 40.909 0.00 0.00 0.00 4.63
2874 7792 4.340617 ACATTTTTATTTCTGCCCCGAGA 58.659 39.130 0.00 0.00 0.00 4.04
2875 7793 4.770010 ACATTTTTATTTCTGCCCCGAGAA 59.230 37.500 0.00 0.00 0.00 2.87
2876 7794 5.245075 ACATTTTTATTTCTGCCCCGAGAAA 59.755 36.000 0.00 0.00 44.17 2.52
2877 7795 4.776795 TTTTATTTCTGCCCCGAGAAAC 57.223 40.909 0.00 0.00 43.14 2.78
2878 7796 3.426787 TTATTTCTGCCCCGAGAAACA 57.573 42.857 0.00 0.00 43.14 2.83
2879 7797 2.286365 ATTTCTGCCCCGAGAAACAA 57.714 45.000 0.00 0.00 43.14 2.83
2880 7798 2.060050 TTTCTGCCCCGAGAAACAAA 57.940 45.000 0.00 0.00 37.10 2.83
2881 7799 2.060050 TTCTGCCCCGAGAAACAAAA 57.940 45.000 0.00 0.00 0.00 2.44
2882 7800 1.604604 TCTGCCCCGAGAAACAAAAG 58.395 50.000 0.00 0.00 0.00 2.27
2883 7801 0.598065 CTGCCCCGAGAAACAAAAGG 59.402 55.000 0.00 0.00 0.00 3.11
2884 7802 1.289066 GCCCCGAGAAACAAAAGGC 59.711 57.895 0.00 0.00 0.00 4.35
2885 7803 1.964448 CCCCGAGAAACAAAAGGCC 59.036 57.895 0.00 0.00 0.00 5.19
2886 7804 1.579429 CCCGAGAAACAAAAGGCCG 59.421 57.895 0.00 0.00 0.00 6.13
2887 7805 0.887387 CCCGAGAAACAAAAGGCCGA 60.887 55.000 0.00 0.00 0.00 5.54
2888 7806 0.948678 CCGAGAAACAAAAGGCCGAA 59.051 50.000 0.00 0.00 0.00 4.30
2889 7807 1.069227 CCGAGAAACAAAAGGCCGAAG 60.069 52.381 0.00 0.00 0.00 3.79
2890 7808 1.871039 CGAGAAACAAAAGGCCGAAGA 59.129 47.619 0.00 0.00 0.00 2.87
2891 7809 2.096218 CGAGAAACAAAAGGCCGAAGAG 60.096 50.000 0.00 0.00 0.00 2.85
2892 7810 1.609072 AGAAACAAAAGGCCGAAGAGC 59.391 47.619 0.00 0.00 0.00 4.09
2893 7811 1.336755 GAAACAAAAGGCCGAAGAGCA 59.663 47.619 0.00 0.00 0.00 4.26
2894 7812 0.954452 AACAAAAGGCCGAAGAGCAG 59.046 50.000 0.00 0.00 0.00 4.24
2895 7813 0.890996 ACAAAAGGCCGAAGAGCAGG 60.891 55.000 0.00 0.00 0.00 4.85
2896 7814 0.606401 CAAAAGGCCGAAGAGCAGGA 60.606 55.000 0.00 0.00 0.00 3.86
2897 7815 0.329596 AAAAGGCCGAAGAGCAGGAT 59.670 50.000 0.00 0.00 0.00 3.24
2898 7816 0.393537 AAAGGCCGAAGAGCAGGATG 60.394 55.000 0.00 0.00 40.87 3.51
2899 7817 1.267574 AAGGCCGAAGAGCAGGATGA 61.268 55.000 0.00 0.00 39.69 2.92
2900 7818 1.221840 GGCCGAAGAGCAGGATGAA 59.778 57.895 0.00 0.00 39.69 2.57
2901 7819 0.392998 GGCCGAAGAGCAGGATGAAA 60.393 55.000 0.00 0.00 39.69 2.69
2902 7820 1.453155 GCCGAAGAGCAGGATGAAAA 58.547 50.000 0.00 0.00 39.69 2.29
2903 7821 1.812571 GCCGAAGAGCAGGATGAAAAA 59.187 47.619 0.00 0.00 39.69 1.94
2904 7822 2.414691 GCCGAAGAGCAGGATGAAAAAC 60.415 50.000 0.00 0.00 39.69 2.43
2905 7823 2.813754 CCGAAGAGCAGGATGAAAAACA 59.186 45.455 0.00 0.00 39.69 2.83
2906 7824 3.120060 CCGAAGAGCAGGATGAAAAACAG 60.120 47.826 0.00 0.00 39.69 3.16
2907 7825 3.748048 CGAAGAGCAGGATGAAAAACAGA 59.252 43.478 0.00 0.00 39.69 3.41
2908 7826 4.214119 CGAAGAGCAGGATGAAAAACAGAA 59.786 41.667 0.00 0.00 39.69 3.02
2909 7827 5.616424 CGAAGAGCAGGATGAAAAACAGAAG 60.616 44.000 0.00 0.00 39.69 2.85
2910 7828 4.077822 AGAGCAGGATGAAAAACAGAAGG 58.922 43.478 0.00 0.00 39.69 3.46
2911 7829 3.823304 GAGCAGGATGAAAAACAGAAGGT 59.177 43.478 0.00 0.00 39.69 3.50
2912 7830 4.985538 AGCAGGATGAAAAACAGAAGGTA 58.014 39.130 0.00 0.00 39.69 3.08
2913 7831 5.385198 AGCAGGATGAAAAACAGAAGGTAA 58.615 37.500 0.00 0.00 39.69 2.85
2914 7832 5.474876 AGCAGGATGAAAAACAGAAGGTAAG 59.525 40.000 0.00 0.00 39.69 2.34
2915 7833 5.241728 GCAGGATGAAAAACAGAAGGTAAGT 59.758 40.000 0.00 0.00 39.69 2.24
2916 7834 6.239036 GCAGGATGAAAAACAGAAGGTAAGTT 60.239 38.462 0.00 0.00 39.69 2.66
2917 7835 7.141363 CAGGATGAAAAACAGAAGGTAAGTTG 58.859 38.462 0.00 0.00 39.69 3.16
2918 7836 7.013274 CAGGATGAAAAACAGAAGGTAAGTTGA 59.987 37.037 0.00 0.00 39.69 3.18
2919 7837 7.725844 AGGATGAAAAACAGAAGGTAAGTTGAT 59.274 33.333 0.00 0.00 0.00 2.57
2920 7838 7.809806 GGATGAAAAACAGAAGGTAAGTTGATG 59.190 37.037 0.00 0.00 0.00 3.07
2921 7839 6.503524 TGAAAAACAGAAGGTAAGTTGATGC 58.496 36.000 0.00 0.00 0.00 3.91
2922 7840 6.096141 TGAAAAACAGAAGGTAAGTTGATGCA 59.904 34.615 0.00 0.00 0.00 3.96
2923 7841 5.695851 AAACAGAAGGTAAGTTGATGCAG 57.304 39.130 0.00 0.00 0.00 4.41
2924 7842 3.077359 ACAGAAGGTAAGTTGATGCAGC 58.923 45.455 0.00 0.00 0.00 5.25
2925 7843 3.244700 ACAGAAGGTAAGTTGATGCAGCT 60.245 43.478 2.53 0.00 0.00 4.24
2926 7844 3.755378 CAGAAGGTAAGTTGATGCAGCTT 59.245 43.478 2.53 2.30 38.39 3.74
2927 7845 3.755378 AGAAGGTAAGTTGATGCAGCTTG 59.245 43.478 2.53 0.00 35.78 4.01
2928 7846 3.146104 AGGTAAGTTGATGCAGCTTGT 57.854 42.857 2.53 0.00 35.78 3.16
2929 7847 3.490348 AGGTAAGTTGATGCAGCTTGTT 58.510 40.909 2.53 0.00 35.78 2.83
2930 7848 3.254166 AGGTAAGTTGATGCAGCTTGTTG 59.746 43.478 2.53 0.00 35.78 3.33
2931 7849 3.253188 GGTAAGTTGATGCAGCTTGTTGA 59.747 43.478 2.53 0.00 35.78 3.18
2932 7850 4.261572 GGTAAGTTGATGCAGCTTGTTGAA 60.262 41.667 2.53 0.00 35.78 2.69
2933 7851 3.637998 AGTTGATGCAGCTTGTTGAAG 57.362 42.857 2.53 0.00 0.00 3.02
2941 7859 3.683581 GCTTGTTGAAGCGTCCATC 57.316 52.632 0.00 0.00 45.12 3.51
2942 7860 1.160137 GCTTGTTGAAGCGTCCATCT 58.840 50.000 0.00 0.00 45.12 2.90
2943 7861 1.537202 GCTTGTTGAAGCGTCCATCTT 59.463 47.619 0.00 0.00 45.12 2.40
2944 7862 2.030805 GCTTGTTGAAGCGTCCATCTTT 60.031 45.455 0.00 0.00 45.12 2.52
2945 7863 3.550842 GCTTGTTGAAGCGTCCATCTTTT 60.551 43.478 0.00 0.00 45.12 2.27
2946 7864 4.610945 CTTGTTGAAGCGTCCATCTTTTT 58.389 39.130 0.00 0.00 0.00 1.94
2962 7880 2.656947 TTTTTGCAGCACTAGGGAGT 57.343 45.000 0.00 0.00 35.80 3.85
2975 7893 2.903404 GGGAGTGATCCCGAAGAGT 58.097 57.895 0.00 0.00 40.59 3.24
2976 7894 1.196012 GGGAGTGATCCCGAAGAGTT 58.804 55.000 0.00 0.00 40.59 3.01
2977 7895 1.555533 GGGAGTGATCCCGAAGAGTTT 59.444 52.381 0.00 0.00 40.59 2.66
2978 7896 2.622436 GGAGTGATCCCGAAGAGTTTG 58.378 52.381 0.00 0.00 0.00 2.93
2979 7897 2.622436 GAGTGATCCCGAAGAGTTTGG 58.378 52.381 0.00 0.00 0.00 3.28
2980 7898 2.233922 GAGTGATCCCGAAGAGTTTGGA 59.766 50.000 0.00 0.00 36.18 3.53
2981 7899 2.840651 AGTGATCCCGAAGAGTTTGGAT 59.159 45.455 0.00 0.00 40.27 3.41
2983 7901 3.828875 GATCCCGAAGAGTTTGGATCT 57.171 47.619 9.55 0.00 46.36 2.75
2984 7902 3.462021 GATCCCGAAGAGTTTGGATCTG 58.538 50.000 9.55 0.00 46.36 2.90
2985 7903 1.555075 TCCCGAAGAGTTTGGATCTGG 59.445 52.381 0.00 0.00 36.18 3.86
2986 7904 1.279271 CCCGAAGAGTTTGGATCTGGT 59.721 52.381 0.00 0.00 36.18 4.00
2987 7905 2.622436 CCGAAGAGTTTGGATCTGGTC 58.378 52.381 0.00 0.00 36.18 4.02
2988 7906 2.028112 CCGAAGAGTTTGGATCTGGTCA 60.028 50.000 0.00 0.00 36.18 4.02
2989 7907 2.996621 CGAAGAGTTTGGATCTGGTCAC 59.003 50.000 0.00 0.00 0.00 3.67
2990 7908 3.339141 GAAGAGTTTGGATCTGGTCACC 58.661 50.000 0.00 0.00 0.00 4.02
2991 7909 1.630878 AGAGTTTGGATCTGGTCACCC 59.369 52.381 0.00 0.00 0.00 4.61
2992 7910 0.698818 AGTTTGGATCTGGTCACCCC 59.301 55.000 0.00 0.00 0.00 4.95
2993 7911 0.404040 GTTTGGATCTGGTCACCCCA 59.596 55.000 0.00 0.00 42.51 4.96
3002 7920 0.991920 TGGTCACCCCAGAATTCTCC 59.008 55.000 4.57 2.51 38.72 3.71
3003 7921 1.290134 GGTCACCCCAGAATTCTCCT 58.710 55.000 4.57 0.00 0.00 3.69
3004 7922 2.225779 TGGTCACCCCAGAATTCTCCTA 60.226 50.000 4.57 0.00 38.72 2.94
3005 7923 2.436173 GGTCACCCCAGAATTCTCCTAG 59.564 54.545 4.57 0.00 0.00 3.02
3006 7924 3.108376 GTCACCCCAGAATTCTCCTAGT 58.892 50.000 4.57 0.00 0.00 2.57
3007 7925 3.133183 GTCACCCCAGAATTCTCCTAGTC 59.867 52.174 4.57 0.00 0.00 2.59
3008 7926 3.012959 TCACCCCAGAATTCTCCTAGTCT 59.987 47.826 4.57 0.00 0.00 3.24
3009 7927 3.386402 CACCCCAGAATTCTCCTAGTCTC 59.614 52.174 4.57 0.00 0.00 3.36
3010 7928 3.273618 ACCCCAGAATTCTCCTAGTCTCT 59.726 47.826 4.57 0.00 0.00 3.10
3011 7929 4.482772 ACCCCAGAATTCTCCTAGTCTCTA 59.517 45.833 4.57 0.00 0.00 2.43
3012 7930 5.076873 CCCCAGAATTCTCCTAGTCTCTAG 58.923 50.000 4.57 0.00 0.00 2.43
3013 7931 5.076873 CCCAGAATTCTCCTAGTCTCTAGG 58.923 50.000 4.57 14.58 36.06 3.02
3014 7932 4.522789 CCAGAATTCTCCTAGTCTCTAGGC 59.477 50.000 15.60 3.72 34.74 3.93
3015 7933 4.215399 CAGAATTCTCCTAGTCTCTAGGCG 59.785 50.000 15.60 11.07 34.74 5.52
3016 7934 1.970092 TTCTCCTAGTCTCTAGGCGC 58.030 55.000 15.60 0.00 34.74 6.53
3017 7935 0.108963 TCTCCTAGTCTCTAGGCGCC 59.891 60.000 21.89 21.89 34.74 6.53
3018 7936 0.179015 CTCCTAGTCTCTAGGCGCCA 60.179 60.000 31.54 14.00 34.74 5.69
3019 7937 0.478942 TCCTAGTCTCTAGGCGCCAT 59.521 55.000 31.54 16.46 34.74 4.40
3020 7938 0.885196 CCTAGTCTCTAGGCGCCATC 59.115 60.000 31.54 11.54 0.00 3.51
3021 7939 0.885196 CTAGTCTCTAGGCGCCATCC 59.115 60.000 31.54 9.84 0.00 3.51
3022 7940 0.185175 TAGTCTCTAGGCGCCATCCA 59.815 55.000 31.54 9.67 0.00 3.41
3023 7941 0.470833 AGTCTCTAGGCGCCATCCAT 60.471 55.000 31.54 10.27 0.00 3.41
3024 7942 0.320247 GTCTCTAGGCGCCATCCATG 60.320 60.000 31.54 13.29 0.00 3.66
3025 7943 0.760567 TCTCTAGGCGCCATCCATGT 60.761 55.000 31.54 8.51 0.00 3.21
3026 7944 0.602106 CTCTAGGCGCCATCCATGTG 60.602 60.000 31.54 8.82 0.00 3.21
3027 7945 2.203195 TAGGCGCCATCCATGTGC 60.203 61.111 31.54 0.00 0.00 4.57
3028 7946 2.671370 CTAGGCGCCATCCATGTGCT 62.671 60.000 31.54 5.89 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.468914 GAGTTGGTCCAGCCGAATTTC 59.531 52.381 1.44 0.00 41.21 2.17
1 2 1.202879 TGAGTTGGTCCAGCCGAATTT 60.203 47.619 1.44 0.00 41.21 1.82
2 3 0.400213 TGAGTTGGTCCAGCCGAATT 59.600 50.000 1.44 0.00 41.21 2.17
3 4 0.620556 ATGAGTTGGTCCAGCCGAAT 59.379 50.000 1.44 0.00 41.21 3.34
4 5 0.036388 GATGAGTTGGTCCAGCCGAA 60.036 55.000 1.44 0.00 41.21 4.30
5 6 1.596934 GATGAGTTGGTCCAGCCGA 59.403 57.895 1.44 0.00 41.21 5.54
6 7 1.450312 GGATGAGTTGGTCCAGCCG 60.450 63.158 1.44 0.00 41.21 5.52
7 8 1.077429 GGGATGAGTTGGTCCAGCC 60.077 63.158 1.44 0.00 38.07 4.85
8 9 0.678048 GTGGGATGAGTTGGTCCAGC 60.678 60.000 0.00 0.00 36.19 4.85
9 10 0.987294 AGTGGGATGAGTTGGTCCAG 59.013 55.000 0.00 0.00 36.19 3.86
10 11 1.351017 GAAGTGGGATGAGTTGGTCCA 59.649 52.381 0.00 0.00 36.19 4.02
11 12 1.340114 GGAAGTGGGATGAGTTGGTCC 60.340 57.143 0.00 0.00 0.00 4.46
12 13 1.351017 TGGAAGTGGGATGAGTTGGTC 59.649 52.381 0.00 0.00 0.00 4.02
13 14 1.073923 GTGGAAGTGGGATGAGTTGGT 59.926 52.381 0.00 0.00 0.00 3.67
14 15 1.826385 GTGGAAGTGGGATGAGTTGG 58.174 55.000 0.00 0.00 0.00 3.77
15 16 1.442769 CGTGGAAGTGGGATGAGTTG 58.557 55.000 0.00 0.00 0.00 3.16
16 17 0.321653 GCGTGGAAGTGGGATGAGTT 60.322 55.000 0.00 0.00 0.00 3.01
17 18 1.296715 GCGTGGAAGTGGGATGAGT 59.703 57.895 0.00 0.00 0.00 3.41
18 19 1.450312 GGCGTGGAAGTGGGATGAG 60.450 63.158 0.00 0.00 0.00 2.90
19 20 2.668632 GGCGTGGAAGTGGGATGA 59.331 61.111 0.00 0.00 0.00 2.92
20 21 2.819595 CGGCGTGGAAGTGGGATG 60.820 66.667 0.00 0.00 0.00 3.51
21 22 3.319198 ACGGCGTGGAAGTGGGAT 61.319 61.111 13.76 0.00 0.00 3.85
22 23 4.308458 CACGGCGTGGAAGTGGGA 62.308 66.667 31.19 0.00 32.68 4.37
23 24 4.308458 TCACGGCGTGGAAGTGGG 62.308 66.667 36.30 11.74 36.60 4.61
24 25 2.738521 CTCACGGCGTGGAAGTGG 60.739 66.667 36.30 17.09 36.60 4.00
25 26 3.414700 GCTCACGGCGTGGAAGTG 61.415 66.667 36.30 22.01 37.24 3.16
37 38 4.500116 GAGGGAGACGGCGCTCAC 62.500 72.222 24.88 22.94 44.52 3.51
41 42 4.899239 CATGGAGGGAGACGGCGC 62.899 72.222 6.90 0.00 0.00 6.53
42 43 4.899239 GCATGGAGGGAGACGGCG 62.899 72.222 4.80 4.80 0.00 6.46
43 44 3.785859 TGCATGGAGGGAGACGGC 61.786 66.667 0.00 0.00 0.00 5.68
44 45 2.187946 GTGCATGGAGGGAGACGG 59.812 66.667 0.00 0.00 0.00 4.79
45 46 1.903877 AAGGTGCATGGAGGGAGACG 61.904 60.000 0.00 0.00 0.00 4.18
46 47 0.393537 CAAGGTGCATGGAGGGAGAC 60.394 60.000 0.00 0.00 0.00 3.36
47 48 1.565390 CCAAGGTGCATGGAGGGAGA 61.565 60.000 0.00 0.00 40.56 3.71
48 49 1.077212 CCAAGGTGCATGGAGGGAG 60.077 63.158 0.00 0.00 40.56 4.30
49 50 1.852157 ACCAAGGTGCATGGAGGGA 60.852 57.895 11.80 0.00 40.56 4.20
50 51 1.379044 GACCAAGGTGCATGGAGGG 60.379 63.158 11.80 2.56 40.56 4.30
51 52 1.746615 CGACCAAGGTGCATGGAGG 60.747 63.158 11.80 4.37 40.56 4.30
52 53 2.401766 GCGACCAAGGTGCATGGAG 61.402 63.158 11.80 6.32 40.56 3.86
53 54 2.359850 GCGACCAAGGTGCATGGA 60.360 61.111 11.80 0.00 40.56 3.41
54 55 3.443045 GGCGACCAAGGTGCATGG 61.443 66.667 3.18 3.18 43.84 3.66
55 56 1.926511 GAAGGCGACCAAGGTGCATG 61.927 60.000 0.00 0.00 0.00 4.06
56 57 1.675641 GAAGGCGACCAAGGTGCAT 60.676 57.895 0.00 0.00 0.00 3.96
57 58 2.281484 GAAGGCGACCAAGGTGCA 60.281 61.111 0.00 0.00 0.00 4.57
58 59 3.423154 CGAAGGCGACCAAGGTGC 61.423 66.667 0.00 0.73 40.82 5.01
59 60 3.423154 GCGAAGGCGACCAAGGTG 61.423 66.667 0.00 0.00 40.82 4.00
60 61 1.823169 TAAGCGAAGGCGACCAAGGT 61.823 55.000 0.00 0.00 46.35 3.50
61 62 0.462047 ATAAGCGAAGGCGACCAAGG 60.462 55.000 0.00 0.00 46.35 3.61
62 63 0.652592 CATAAGCGAAGGCGACCAAG 59.347 55.000 0.00 0.00 46.35 3.61
143 144 6.282167 GGAGTAAAATACTAGGCTTCTCACC 58.718 44.000 0.00 0.00 39.59 4.02
179 180 2.102925 ACAGGGCCAAACAGACAAATTG 59.897 45.455 6.18 0.00 0.00 2.32
181 182 2.086610 ACAGGGCCAAACAGACAAAT 57.913 45.000 6.18 0.00 0.00 2.32
186 187 6.926630 ATTTTATTTACAGGGCCAAACAGA 57.073 33.333 6.18 0.00 0.00 3.41
194 195 9.822185 ATTGAATCAGAATTTTATTTACAGGGC 57.178 29.630 0.00 0.00 0.00 5.19
211 212 7.452880 TGTTTGAGGGAGTAAATTGAATCAG 57.547 36.000 0.00 0.00 0.00 2.90
359 361 8.920665 CAGACAAAAACTTTGTTTAATGTGTCA 58.079 29.630 19.25 0.00 31.96 3.58
570 2061 6.651755 ATTGTGCACTTGCTTATTATTTGC 57.348 33.333 19.41 0.00 42.66 3.68
580 2071 2.352421 GCATCTGAATTGTGCACTTGCT 60.352 45.455 19.41 0.00 42.66 3.91
622 3207 2.080693 AGCTGTCTACTCTGACTCACG 58.919 52.381 0.00 0.00 37.79 4.35
789 3374 1.942657 AGCTGCAGGCAATAATACGTG 59.057 47.619 17.12 0.00 44.79 4.49
839 3427 3.853698 TTAACCGTGGGTGCCTGCC 62.854 63.158 0.00 0.00 35.34 4.85
840 3428 2.281900 TTAACCGTGGGTGCCTGC 60.282 61.111 0.00 0.00 35.34 4.85
841 3429 1.674322 CCTTAACCGTGGGTGCCTG 60.674 63.158 0.00 0.00 35.34 4.85
897 3488 7.132863 GCAAAGTTTGGTACTCAGAAACTAAG 58.867 38.462 17.11 8.82 38.64 2.18
900 3491 4.947388 TGCAAAGTTTGGTACTCAGAAACT 59.053 37.500 17.11 0.00 40.77 2.66
905 3496 4.900635 AGTTGCAAAGTTTGGTACTCAG 57.099 40.909 17.11 0.00 35.54 3.35
995 3626 4.488136 ATGGGGCGCGCATCTTCA 62.488 61.111 34.42 21.46 31.37 3.02
1009 3640 2.887568 GCAGCGTCCGAGTGATGG 60.888 66.667 0.00 0.00 0.00 3.51
1411 4048 1.423056 CCGTGTAGGAGACGTCGAC 59.577 63.158 10.46 5.18 45.00 4.20
1736 4373 2.515979 TTCAGGCCGAACAGGAGCA 61.516 57.895 0.00 0.00 45.00 4.26
1770 4407 3.958147 ATTGCGCGACAGGTCCAGG 62.958 63.158 12.10 0.00 0.00 4.45
1788 4425 0.767375 AGAGGTTGAAGCTGAAGGCA 59.233 50.000 0.00 0.00 44.79 4.75
1855 4492 2.572647 CGCACCGTAGACGTCGTC 60.573 66.667 17.70 17.70 37.74 4.20
1882 4519 0.106469 TACTGCAGTTTGGCCACCAA 60.106 50.000 27.06 0.00 42.29 3.67
1883 4520 0.112218 ATACTGCAGTTTGGCCACCA 59.888 50.000 27.06 3.23 0.00 4.17
2016 4653 1.079819 CGACGATCACTTGCAGGGT 60.080 57.895 0.00 0.00 0.00 4.34
2037 4677 0.750182 AGGAGCTAGTCGGCTGAGAC 60.750 60.000 0.00 0.00 43.20 3.36
2038 4678 0.464735 GAGGAGCTAGTCGGCTGAGA 60.465 60.000 0.00 0.00 43.20 3.27
2039 4679 1.452145 GGAGGAGCTAGTCGGCTGAG 61.452 65.000 0.00 0.00 43.20 3.35
2040 4680 1.454111 GGAGGAGCTAGTCGGCTGA 60.454 63.158 0.00 0.00 43.20 4.26
2041 4681 1.323271 TTGGAGGAGCTAGTCGGCTG 61.323 60.000 0.00 0.00 43.20 4.85
2042 4682 1.000486 TTGGAGGAGCTAGTCGGCT 60.000 57.895 0.00 0.00 46.11 5.52
2043 4683 1.142097 GTTGGAGGAGCTAGTCGGC 59.858 63.158 0.00 0.00 0.00 5.54
2044 4684 1.817209 GGTTGGAGGAGCTAGTCGG 59.183 63.158 0.00 0.00 0.00 4.79
2104 4744 9.750125 GTGGGATGCTTTTATTATTCCTTAAAG 57.250 33.333 0.00 0.00 0.00 1.85
2105 4745 9.487442 AGTGGGATGCTTTTATTATTCCTTAAA 57.513 29.630 0.00 0.00 0.00 1.52
2106 4746 9.487442 AAGTGGGATGCTTTTATTATTCCTTAA 57.513 29.630 0.00 0.00 0.00 1.85
2111 4751 8.000780 ACTGAAGTGGGATGCTTTTATTATTC 57.999 34.615 0.00 0.00 0.00 1.75
2129 4769 4.803098 AGAAGCATTACCGTACTGAAGT 57.197 40.909 0.27 0.00 0.00 3.01
2139 4779 5.086104 TGAGGACAGTAAGAAGCATTACC 57.914 43.478 3.66 0.00 36.49 2.85
2157 4797 2.497138 TGTGAAGATGCACACTTGAGG 58.503 47.619 11.83 0.00 43.35 3.86
2359 7275 6.045318 AGTATCATGAATCAGACTTGGAACG 58.955 40.000 0.00 0.00 0.00 3.95
2378 7294 6.476706 GCCTAATGCCAAATTTGTCAAGTATC 59.523 38.462 16.73 0.00 0.00 2.24
2441 7358 4.546674 ACTTGGGGTTCTCACTTGAAAAT 58.453 39.130 0.00 0.00 0.00 1.82
2567 7485 7.768120 TCTTAATGGAAATCAAAGAGAGAGCTC 59.232 37.037 5.27 5.27 41.62 4.09
2568 7486 7.628234 TCTTAATGGAAATCAAAGAGAGAGCT 58.372 34.615 0.00 0.00 0.00 4.09
2569 7487 7.768120 TCTCTTAATGGAAATCAAAGAGAGAGC 59.232 37.037 8.59 0.00 41.11 4.09
2570 7488 9.664332 TTCTCTTAATGGAAATCAAAGAGAGAG 57.336 33.333 11.59 0.00 44.02 3.20
2581 7499 7.418254 GGCATGGTGATTTCTCTTAATGGAAAT 60.418 37.037 12.55 12.55 42.53 2.17
2582 7500 6.127366 GGCATGGTGATTTCTCTTAATGGAAA 60.127 38.462 0.00 5.76 36.17 3.13
2583 7501 5.360714 GGCATGGTGATTTCTCTTAATGGAA 59.639 40.000 0.00 0.00 0.00 3.53
2584 7502 4.889409 GGCATGGTGATTTCTCTTAATGGA 59.111 41.667 0.00 0.00 0.00 3.41
2585 7503 4.891756 AGGCATGGTGATTTCTCTTAATGG 59.108 41.667 0.00 0.00 0.00 3.16
2586 7504 6.461110 AAGGCATGGTGATTTCTCTTAATG 57.539 37.500 0.00 0.00 0.00 1.90
2587 7505 7.118723 TGTAAGGCATGGTGATTTCTCTTAAT 58.881 34.615 0.00 0.00 0.00 1.40
2588 7506 6.480763 TGTAAGGCATGGTGATTTCTCTTAA 58.519 36.000 0.00 0.00 0.00 1.85
2589 7507 6.061022 TGTAAGGCATGGTGATTTCTCTTA 57.939 37.500 0.00 0.00 0.00 2.10
2590 7508 4.922206 TGTAAGGCATGGTGATTTCTCTT 58.078 39.130 0.00 0.00 0.00 2.85
2591 7509 4.225942 TCTGTAAGGCATGGTGATTTCTCT 59.774 41.667 0.00 0.00 0.00 3.10
2592 7510 4.517285 TCTGTAAGGCATGGTGATTTCTC 58.483 43.478 0.00 0.00 0.00 2.87
2593 7511 4.521146 CTCTGTAAGGCATGGTGATTTCT 58.479 43.478 0.00 0.00 0.00 2.52
2594 7512 3.629398 CCTCTGTAAGGCATGGTGATTTC 59.371 47.826 0.00 0.00 38.67 2.17
2595 7513 3.266772 TCCTCTGTAAGGCATGGTGATTT 59.733 43.478 0.00 0.00 45.78 2.17
2596 7514 2.846206 TCCTCTGTAAGGCATGGTGATT 59.154 45.455 0.00 0.00 45.78 2.57
2597 7515 2.481441 TCCTCTGTAAGGCATGGTGAT 58.519 47.619 0.00 0.00 45.78 3.06
2598 7516 1.951209 TCCTCTGTAAGGCATGGTGA 58.049 50.000 0.00 0.00 45.78 4.02
2599 7517 2.026822 ACTTCCTCTGTAAGGCATGGTG 60.027 50.000 0.00 0.00 45.78 4.17
2600 7518 2.269940 ACTTCCTCTGTAAGGCATGGT 58.730 47.619 0.00 0.00 45.78 3.55
2601 7519 4.487714 TTACTTCCTCTGTAAGGCATGG 57.512 45.455 0.00 0.00 45.78 3.66
2602 7520 6.817765 TTTTTACTTCCTCTGTAAGGCATG 57.182 37.500 0.00 0.00 45.78 4.06
2626 7544 9.649167 AGATACGTTGTAGTAGCTTTATGTTTT 57.351 29.630 0.00 0.00 39.99 2.43
2627 7545 9.298774 GAGATACGTTGTAGTAGCTTTATGTTT 57.701 33.333 0.00 0.00 42.57 2.83
2628 7546 8.684520 AGAGATACGTTGTAGTAGCTTTATGTT 58.315 33.333 0.00 0.00 42.57 2.71
2629 7547 8.129840 CAGAGATACGTTGTAGTAGCTTTATGT 58.870 37.037 0.00 0.00 42.57 2.29
2630 7548 7.113684 GCAGAGATACGTTGTAGTAGCTTTATG 59.886 40.741 0.00 0.00 42.57 1.90
2631 7549 7.140048 GCAGAGATACGTTGTAGTAGCTTTAT 58.860 38.462 0.00 0.00 42.57 1.40
2632 7550 6.493116 GCAGAGATACGTTGTAGTAGCTTTA 58.507 40.000 0.00 0.00 42.57 1.85
2633 7551 5.341617 GCAGAGATACGTTGTAGTAGCTTT 58.658 41.667 0.00 0.00 42.57 3.51
2634 7552 4.496010 CGCAGAGATACGTTGTAGTAGCTT 60.496 45.833 0.00 0.00 42.57 3.74
2635 7553 3.002451 CGCAGAGATACGTTGTAGTAGCT 59.998 47.826 0.00 0.00 44.83 3.32
2636 7554 3.002042 TCGCAGAGATACGTTGTAGTAGC 59.998 47.826 0.00 0.00 33.58 3.58
2637 7555 4.790810 TCGCAGAGATACGTTGTAGTAG 57.209 45.455 0.00 0.00 0.00 2.57
2638 7556 4.872124 TCTTCGCAGAGATACGTTGTAGTA 59.128 41.667 0.00 0.00 38.43 1.82
2639 7557 3.688185 TCTTCGCAGAGATACGTTGTAGT 59.312 43.478 0.00 0.00 38.43 2.73
2640 7558 4.274421 TCTTCGCAGAGATACGTTGTAG 57.726 45.455 0.00 0.00 38.43 2.74
2652 7570 4.217334 CCTCAATATCTAGCTCTTCGCAGA 59.783 45.833 0.00 0.00 42.61 4.26
2653 7571 4.484236 CCTCAATATCTAGCTCTTCGCAG 58.516 47.826 0.00 0.00 42.61 5.18
2654 7572 3.256879 CCCTCAATATCTAGCTCTTCGCA 59.743 47.826 0.00 0.00 42.61 5.10
2655 7573 3.508012 TCCCTCAATATCTAGCTCTTCGC 59.492 47.826 0.00 0.00 39.57 4.70
2656 7574 4.157656 CCTCCCTCAATATCTAGCTCTTCG 59.842 50.000 0.00 0.00 0.00 3.79
2657 7575 4.466015 CCCTCCCTCAATATCTAGCTCTTC 59.534 50.000 0.00 0.00 0.00 2.87
2658 7576 4.424842 CCCTCCCTCAATATCTAGCTCTT 58.575 47.826 0.00 0.00 0.00 2.85
2659 7577 3.245948 CCCCTCCCTCAATATCTAGCTCT 60.246 52.174 0.00 0.00 0.00 4.09
2660 7578 3.103742 CCCCTCCCTCAATATCTAGCTC 58.896 54.545 0.00 0.00 0.00 4.09
2661 7579 2.225753 CCCCCTCCCTCAATATCTAGCT 60.226 54.545 0.00 0.00 0.00 3.32
2662 7580 2.192263 CCCCCTCCCTCAATATCTAGC 58.808 57.143 0.00 0.00 0.00 3.42
2663 7581 3.854801 TCCCCCTCCCTCAATATCTAG 57.145 52.381 0.00 0.00 0.00 2.43
2664 7582 4.503398 CTTTCCCCCTCCCTCAATATCTA 58.497 47.826 0.00 0.00 0.00 1.98
2665 7583 3.331120 CTTTCCCCCTCCCTCAATATCT 58.669 50.000 0.00 0.00 0.00 1.98
2666 7584 2.224892 GCTTTCCCCCTCCCTCAATATC 60.225 54.545 0.00 0.00 0.00 1.63
2667 7585 1.783365 GCTTTCCCCCTCCCTCAATAT 59.217 52.381 0.00 0.00 0.00 1.28
2668 7586 1.222567 GCTTTCCCCCTCCCTCAATA 58.777 55.000 0.00 0.00 0.00 1.90
2669 7587 1.584717 GGCTTTCCCCCTCCCTCAAT 61.585 60.000 0.00 0.00 0.00 2.57
2670 7588 2.238701 GGCTTTCCCCCTCCCTCAA 61.239 63.158 0.00 0.00 0.00 3.02
2671 7589 2.614013 GGCTTTCCCCCTCCCTCA 60.614 66.667 0.00 0.00 0.00 3.86
2672 7590 2.614013 TGGCTTTCCCCCTCCCTC 60.614 66.667 0.00 0.00 0.00 4.30
2673 7591 2.941583 GTGGCTTTCCCCCTCCCT 60.942 66.667 0.00 0.00 0.00 4.20
2674 7592 4.062032 GGTGGCTTTCCCCCTCCC 62.062 72.222 0.00 0.00 31.35 4.30
2675 7593 4.062032 GGGTGGCTTTCCCCCTCC 62.062 72.222 2.42 0.00 38.86 4.30
2692 7610 2.854076 GGCCAATATGGGAGGGGG 59.146 66.667 0.00 0.00 38.19 5.40
2693 7611 2.854076 GGGCCAATATGGGAGGGG 59.146 66.667 4.39 0.00 38.19 4.79
2694 7612 2.854076 GGGGCCAATATGGGAGGG 59.146 66.667 4.39 0.00 38.19 4.30
2695 7613 1.663966 TTGGGGGCCAATATGGGAGG 61.664 60.000 4.39 0.00 38.75 4.30
2696 7614 0.264359 TTTGGGGGCCAATATGGGAG 59.736 55.000 4.39 0.00 43.55 4.30
2697 7615 0.264359 CTTTGGGGGCCAATATGGGA 59.736 55.000 4.39 0.00 43.55 4.37
2698 7616 1.410050 GCTTTGGGGGCCAATATGGG 61.410 60.000 4.39 0.00 43.55 4.00
2699 7617 0.690411 TGCTTTGGGGGCCAATATGG 60.690 55.000 4.39 0.00 43.55 2.74
2700 7618 0.754472 CTGCTTTGGGGGCCAATATG 59.246 55.000 4.39 0.00 43.55 1.78
2701 7619 1.050421 GCTGCTTTGGGGGCCAATAT 61.050 55.000 4.39 0.00 43.55 1.28
2702 7620 1.685421 GCTGCTTTGGGGGCCAATA 60.685 57.895 4.39 0.00 43.55 1.90
2703 7621 3.004946 GCTGCTTTGGGGGCCAAT 61.005 61.111 4.39 0.00 43.55 3.16
2704 7622 4.553687 TGCTGCTTTGGGGGCCAA 62.554 61.111 4.39 0.00 42.29 4.52
2708 7626 2.677875 GAGGTGCTGCTTTGGGGG 60.678 66.667 0.00 0.00 0.00 5.40
2709 7627 2.115910 TGAGGTGCTGCTTTGGGG 59.884 61.111 0.00 0.00 0.00 4.96
2710 7628 1.108727 TTGTGAGGTGCTGCTTTGGG 61.109 55.000 0.00 0.00 0.00 4.12
2711 7629 0.313043 CTTGTGAGGTGCTGCTTTGG 59.687 55.000 0.00 0.00 0.00 3.28
2712 7630 1.266175 CTCTTGTGAGGTGCTGCTTTG 59.734 52.381 0.00 0.00 36.70 2.77
2713 7631 1.141657 TCTCTTGTGAGGTGCTGCTTT 59.858 47.619 0.00 0.00 40.58 3.51
2714 7632 0.761187 TCTCTTGTGAGGTGCTGCTT 59.239 50.000 0.00 0.00 40.58 3.91
2715 7633 0.982704 ATCTCTTGTGAGGTGCTGCT 59.017 50.000 0.00 0.00 40.58 4.24
2716 7634 1.066286 AGATCTCTTGTGAGGTGCTGC 60.066 52.381 0.00 0.00 40.58 5.25
2717 7635 4.431809 CTTAGATCTCTTGTGAGGTGCTG 58.568 47.826 0.00 0.00 40.58 4.41
2718 7636 3.450457 CCTTAGATCTCTTGTGAGGTGCT 59.550 47.826 0.00 0.00 40.58 4.40
2719 7637 3.791245 CCTTAGATCTCTTGTGAGGTGC 58.209 50.000 0.00 0.00 40.58 5.01
2720 7638 3.431486 GGCCTTAGATCTCTTGTGAGGTG 60.431 52.174 0.00 0.00 40.58 4.00
2721 7639 2.769095 GGCCTTAGATCTCTTGTGAGGT 59.231 50.000 0.00 0.00 40.58 3.85
2722 7640 3.037549 AGGCCTTAGATCTCTTGTGAGG 58.962 50.000 0.00 0.00 40.58 3.86
2723 7641 3.181467 CCAGGCCTTAGATCTCTTGTGAG 60.181 52.174 0.00 0.00 41.51 3.51
2724 7642 2.768527 CCAGGCCTTAGATCTCTTGTGA 59.231 50.000 0.00 0.00 0.00 3.58
2725 7643 2.158842 CCCAGGCCTTAGATCTCTTGTG 60.159 54.545 0.00 0.00 0.00 3.33
2726 7644 2.122768 CCCAGGCCTTAGATCTCTTGT 58.877 52.381 0.00 0.00 0.00 3.16
2727 7645 1.202746 GCCCAGGCCTTAGATCTCTTG 60.203 57.143 0.00 0.00 34.56 3.02
2728 7646 1.135960 GCCCAGGCCTTAGATCTCTT 58.864 55.000 0.00 0.00 34.56 2.85
2729 7647 0.267356 AGCCCAGGCCTTAGATCTCT 59.733 55.000 0.00 0.00 43.17 3.10
2730 7648 0.684535 GAGCCCAGGCCTTAGATCTC 59.315 60.000 0.00 1.75 43.17 2.75
2731 7649 1.118356 CGAGCCCAGGCCTTAGATCT 61.118 60.000 0.00 0.00 43.17 2.75
2732 7650 1.115930 TCGAGCCCAGGCCTTAGATC 61.116 60.000 0.00 4.45 43.17 2.75
2733 7651 0.691078 TTCGAGCCCAGGCCTTAGAT 60.691 55.000 0.00 0.00 43.17 1.98
2734 7652 1.305802 TTCGAGCCCAGGCCTTAGA 60.306 57.895 0.00 0.00 43.17 2.10
2735 7653 1.153349 GTTCGAGCCCAGGCCTTAG 60.153 63.158 0.00 0.00 43.17 2.18
2736 7654 1.899437 CTGTTCGAGCCCAGGCCTTA 61.899 60.000 0.00 0.00 43.17 2.69
2737 7655 3.249189 TGTTCGAGCCCAGGCCTT 61.249 61.111 0.00 0.00 43.17 4.35
2738 7656 3.710722 CTGTTCGAGCCCAGGCCT 61.711 66.667 0.00 0.00 43.17 5.19
2739 7657 4.785453 CCTGTTCGAGCCCAGGCC 62.785 72.222 12.98 0.00 41.65 5.19
2742 7660 2.266055 GGACCTGTTCGAGCCCAG 59.734 66.667 0.00 0.00 0.00 4.45
2743 7661 3.319198 GGGACCTGTTCGAGCCCA 61.319 66.667 0.00 0.00 38.68 5.36
2744 7662 3.316573 CTGGGACCTGTTCGAGCCC 62.317 68.421 0.00 0.00 39.29 5.19
2745 7663 2.266055 CTGGGACCTGTTCGAGCC 59.734 66.667 0.00 0.00 0.00 4.70
2746 7664 2.435059 GCTGGGACCTGTTCGAGC 60.435 66.667 0.00 0.00 0.00 5.03
2747 7665 1.374758 GTGCTGGGACCTGTTCGAG 60.375 63.158 0.00 0.00 0.00 4.04
2748 7666 2.741092 GTGCTGGGACCTGTTCGA 59.259 61.111 0.00 0.00 0.00 3.71
2749 7667 2.358737 GGTGCTGGGACCTGTTCG 60.359 66.667 4.01 0.00 32.69 3.95
2750 7668 3.161557 AGGTGCTGGGACCTGTTC 58.838 61.111 12.86 0.00 45.20 3.18
2760 7678 2.094659 CGTTCTACGCCAGGTGCTG 61.095 63.158 0.00 0.00 38.05 4.41
2761 7679 1.812686 TTCGTTCTACGCCAGGTGCT 61.813 55.000 0.00 0.00 42.21 4.40
2762 7680 1.352156 CTTCGTTCTACGCCAGGTGC 61.352 60.000 0.00 0.00 42.21 5.01
2763 7681 0.038526 ACTTCGTTCTACGCCAGGTG 60.039 55.000 0.00 0.00 42.21 4.00
2764 7682 0.677842 AACTTCGTTCTACGCCAGGT 59.322 50.000 0.00 0.00 42.21 4.00
2765 7683 1.792006 AAACTTCGTTCTACGCCAGG 58.208 50.000 0.00 0.00 42.21 4.45
2766 7684 4.232221 TCTAAAACTTCGTTCTACGCCAG 58.768 43.478 0.00 0.00 42.21 4.85
2767 7685 4.241590 TCTAAAACTTCGTTCTACGCCA 57.758 40.909 0.00 0.00 42.21 5.69
2768 7686 5.050837 TGTTTCTAAAACTTCGTTCTACGCC 60.051 40.000 4.40 0.00 42.21 5.68
2769 7687 5.966335 TGTTTCTAAAACTTCGTTCTACGC 58.034 37.500 4.40 0.00 42.21 4.42
2770 7688 7.385668 TCTGTTTCTAAAACTTCGTTCTACG 57.614 36.000 4.40 0.00 44.19 3.51
2771 7689 9.634300 CTTTCTGTTTCTAAAACTTCGTTCTAC 57.366 33.333 4.40 0.00 0.00 2.59
2772 7690 9.374838 ACTTTCTGTTTCTAAAACTTCGTTCTA 57.625 29.630 4.40 0.00 0.00 2.10
2773 7691 8.265165 ACTTTCTGTTTCTAAAACTTCGTTCT 57.735 30.769 4.40 0.00 0.00 3.01
2774 7692 9.634300 CTACTTTCTGTTTCTAAAACTTCGTTC 57.366 33.333 4.40 0.00 0.00 3.95
2775 7693 9.159364 ACTACTTTCTGTTTCTAAAACTTCGTT 57.841 29.630 4.40 0.00 0.00 3.85
2776 7694 8.713737 ACTACTTTCTGTTTCTAAAACTTCGT 57.286 30.769 4.40 0.00 0.00 3.85
2777 7695 9.634300 GAACTACTTTCTGTTTCTAAAACTTCG 57.366 33.333 4.40 0.00 0.00 3.79
2784 7702 9.326413 CCTCTTTGAACTACTTTCTGTTTCTAA 57.674 33.333 0.00 0.00 34.97 2.10
2785 7703 7.441458 GCCTCTTTGAACTACTTTCTGTTTCTA 59.559 37.037 0.00 0.00 34.97 2.10
2786 7704 6.261158 GCCTCTTTGAACTACTTTCTGTTTCT 59.739 38.462 0.00 0.00 34.97 2.52
2787 7705 6.038271 TGCCTCTTTGAACTACTTTCTGTTTC 59.962 38.462 0.00 0.00 34.97 2.78
2788 7706 5.885912 TGCCTCTTTGAACTACTTTCTGTTT 59.114 36.000 0.00 0.00 34.97 2.83
2789 7707 5.437060 TGCCTCTTTGAACTACTTTCTGTT 58.563 37.500 0.00 0.00 34.97 3.16
2790 7708 5.036117 TGCCTCTTTGAACTACTTTCTGT 57.964 39.130 0.00 0.00 34.97 3.41
2791 7709 5.296780 TGTTGCCTCTTTGAACTACTTTCTG 59.703 40.000 0.00 0.00 34.97 3.02
2792 7710 5.437060 TGTTGCCTCTTTGAACTACTTTCT 58.563 37.500 0.00 0.00 34.97 2.52
2793 7711 5.751243 TGTTGCCTCTTTGAACTACTTTC 57.249 39.130 0.00 0.00 34.41 2.62
2794 7712 7.173390 GTCTATGTTGCCTCTTTGAACTACTTT 59.827 37.037 0.00 0.00 0.00 2.66
2795 7713 6.651225 GTCTATGTTGCCTCTTTGAACTACTT 59.349 38.462 0.00 0.00 0.00 2.24
2796 7714 6.166982 GTCTATGTTGCCTCTTTGAACTACT 58.833 40.000 0.00 0.00 0.00 2.57
2797 7715 5.932303 TGTCTATGTTGCCTCTTTGAACTAC 59.068 40.000 0.00 0.00 0.00 2.73
2798 7716 6.109156 TGTCTATGTTGCCTCTTTGAACTA 57.891 37.500 0.00 0.00 0.00 2.24
2799 7717 4.973168 TGTCTATGTTGCCTCTTTGAACT 58.027 39.130 0.00 0.00 0.00 3.01
2800 7718 4.378874 GCTGTCTATGTTGCCTCTTTGAAC 60.379 45.833 0.00 0.00 0.00 3.18
2801 7719 3.753272 GCTGTCTATGTTGCCTCTTTGAA 59.247 43.478 0.00 0.00 0.00 2.69
2802 7720 3.338249 GCTGTCTATGTTGCCTCTTTGA 58.662 45.455 0.00 0.00 0.00 2.69
2803 7721 2.421424 GGCTGTCTATGTTGCCTCTTTG 59.579 50.000 0.00 0.00 41.92 2.77
2804 7722 2.619074 GGGCTGTCTATGTTGCCTCTTT 60.619 50.000 0.00 0.00 44.36 2.52
2805 7723 1.065126 GGGCTGTCTATGTTGCCTCTT 60.065 52.381 0.00 0.00 44.36 2.85
2806 7724 0.543749 GGGCTGTCTATGTTGCCTCT 59.456 55.000 0.00 0.00 44.36 3.69
2807 7725 0.543749 AGGGCTGTCTATGTTGCCTC 59.456 55.000 0.00 0.00 44.36 4.70
2808 7726 0.543749 GAGGGCTGTCTATGTTGCCT 59.456 55.000 0.00 0.00 44.36 4.75
2809 7727 0.464554 GGAGGGCTGTCTATGTTGCC 60.465 60.000 0.00 0.00 44.22 4.52
2810 7728 0.543749 AGGAGGGCTGTCTATGTTGC 59.456 55.000 0.00 0.00 0.00 4.17
2811 7729 2.114616 AGAGGAGGGCTGTCTATGTTG 58.885 52.381 0.00 0.00 0.00 3.33
2812 7730 2.559381 AGAGGAGGGCTGTCTATGTT 57.441 50.000 0.00 0.00 0.00 2.71
2813 7731 3.689872 TTAGAGGAGGGCTGTCTATGT 57.310 47.619 0.00 0.00 0.00 2.29
2814 7732 3.706594 TGTTTAGAGGAGGGCTGTCTATG 59.293 47.826 0.00 0.00 0.00 2.23
2815 7733 3.964031 CTGTTTAGAGGAGGGCTGTCTAT 59.036 47.826 0.00 0.00 0.00 1.98
2816 7734 3.366396 CTGTTTAGAGGAGGGCTGTCTA 58.634 50.000 0.00 0.00 0.00 2.59
2817 7735 2.183679 CTGTTTAGAGGAGGGCTGTCT 58.816 52.381 0.00 0.00 0.00 3.41
2818 7736 1.208293 CCTGTTTAGAGGAGGGCTGTC 59.792 57.143 0.00 0.00 34.69 3.51
2819 7737 1.280457 CCTGTTTAGAGGAGGGCTGT 58.720 55.000 0.00 0.00 34.69 4.40
2820 7738 1.280457 ACCTGTTTAGAGGAGGGCTG 58.720 55.000 0.00 0.00 36.51 4.85
2821 7739 2.942604 TACCTGTTTAGAGGAGGGCT 57.057 50.000 0.00 0.00 36.51 5.19
2822 7740 2.369203 GGATACCTGTTTAGAGGAGGGC 59.631 54.545 0.00 0.00 36.51 5.19
2823 7741 3.654273 TGGATACCTGTTTAGAGGAGGG 58.346 50.000 0.00 0.00 36.51 4.30
2824 7742 4.901849 TGATGGATACCTGTTTAGAGGAGG 59.098 45.833 0.00 0.00 36.51 4.30
2825 7743 6.268617 TGATGATGGATACCTGTTTAGAGGAG 59.731 42.308 0.00 0.00 36.51 3.69
2826 7744 6.143206 TGATGATGGATACCTGTTTAGAGGA 58.857 40.000 0.00 0.00 36.51 3.71
2827 7745 6.425210 TGATGATGGATACCTGTTTAGAGG 57.575 41.667 0.00 0.00 39.28 3.69
2828 7746 8.588472 TGTATGATGATGGATACCTGTTTAGAG 58.412 37.037 0.00 0.00 0.00 2.43
2829 7747 8.491045 TGTATGATGATGGATACCTGTTTAGA 57.509 34.615 0.00 0.00 0.00 2.10
2830 7748 9.730705 AATGTATGATGATGGATACCTGTTTAG 57.269 33.333 0.00 0.00 0.00 1.85
2832 7750 9.425248 AAAATGTATGATGATGGATACCTGTTT 57.575 29.630 0.00 0.00 0.00 2.83
2833 7751 9.425248 AAAAATGTATGATGATGGATACCTGTT 57.575 29.630 0.00 0.00 0.00 3.16
2841 7759 9.970395 GCAGAAATAAAAATGTATGATGATGGA 57.030 29.630 0.00 0.00 0.00 3.41
2842 7760 9.199982 GGCAGAAATAAAAATGTATGATGATGG 57.800 33.333 0.00 0.00 0.00 3.51
2843 7761 9.199982 GGGCAGAAATAAAAATGTATGATGATG 57.800 33.333 0.00 0.00 0.00 3.07
2844 7762 8.370182 GGGGCAGAAATAAAAATGTATGATGAT 58.630 33.333 0.00 0.00 0.00 2.45
2845 7763 7.469870 CGGGGCAGAAATAAAAATGTATGATGA 60.470 37.037 0.00 0.00 0.00 2.92
2846 7764 6.642131 CGGGGCAGAAATAAAAATGTATGATG 59.358 38.462 0.00 0.00 0.00 3.07
2847 7765 6.549364 TCGGGGCAGAAATAAAAATGTATGAT 59.451 34.615 0.00 0.00 0.00 2.45
2848 7766 5.888724 TCGGGGCAGAAATAAAAATGTATGA 59.111 36.000 0.00 0.00 0.00 2.15
2849 7767 6.039270 TCTCGGGGCAGAAATAAAAATGTATG 59.961 38.462 0.00 0.00 0.00 2.39
2850 7768 6.126409 TCTCGGGGCAGAAATAAAAATGTAT 58.874 36.000 0.00 0.00 0.00 2.29
2851 7769 5.502079 TCTCGGGGCAGAAATAAAAATGTA 58.498 37.500 0.00 0.00 0.00 2.29
2852 7770 4.340617 TCTCGGGGCAGAAATAAAAATGT 58.659 39.130 0.00 0.00 0.00 2.71
2853 7771 4.981806 TCTCGGGGCAGAAATAAAAATG 57.018 40.909 0.00 0.00 0.00 2.32
2854 7772 5.245075 TGTTTCTCGGGGCAGAAATAAAAAT 59.755 36.000 2.34 0.00 42.88 1.82
2855 7773 4.585162 TGTTTCTCGGGGCAGAAATAAAAA 59.415 37.500 2.34 0.00 42.88 1.94
2856 7774 4.145807 TGTTTCTCGGGGCAGAAATAAAA 58.854 39.130 2.34 0.00 42.88 1.52
2857 7775 3.757270 TGTTTCTCGGGGCAGAAATAAA 58.243 40.909 2.34 0.00 42.88 1.40
2858 7776 3.426787 TGTTTCTCGGGGCAGAAATAA 57.573 42.857 2.34 0.00 42.88 1.40
2859 7777 3.426787 TTGTTTCTCGGGGCAGAAATA 57.573 42.857 2.34 0.00 42.88 1.40
2860 7778 2.286365 TTGTTTCTCGGGGCAGAAAT 57.714 45.000 2.34 0.00 42.88 2.17
2861 7779 2.060050 TTTGTTTCTCGGGGCAGAAA 57.940 45.000 0.00 0.00 39.59 2.52
2862 7780 1.953686 CTTTTGTTTCTCGGGGCAGAA 59.046 47.619 0.00 0.00 0.00 3.02
2863 7781 1.604604 CTTTTGTTTCTCGGGGCAGA 58.395 50.000 0.00 0.00 0.00 4.26
2864 7782 0.598065 CCTTTTGTTTCTCGGGGCAG 59.402 55.000 0.00 0.00 0.00 4.85
2865 7783 1.460273 GCCTTTTGTTTCTCGGGGCA 61.460 55.000 0.00 0.00 38.16 5.36
2866 7784 1.289066 GCCTTTTGTTTCTCGGGGC 59.711 57.895 0.00 0.00 0.00 5.80
2867 7785 1.862602 CGGCCTTTTGTTTCTCGGGG 61.863 60.000 0.00 0.00 0.00 5.73
2868 7786 0.887387 TCGGCCTTTTGTTTCTCGGG 60.887 55.000 0.00 0.00 0.00 5.14
2869 7787 0.948678 TTCGGCCTTTTGTTTCTCGG 59.051 50.000 0.00 0.00 0.00 4.63
2870 7788 1.871039 TCTTCGGCCTTTTGTTTCTCG 59.129 47.619 0.00 0.00 0.00 4.04
2871 7789 2.350868 GCTCTTCGGCCTTTTGTTTCTC 60.351 50.000 0.00 0.00 0.00 2.87
2872 7790 1.609072 GCTCTTCGGCCTTTTGTTTCT 59.391 47.619 0.00 0.00 0.00 2.52
2873 7791 1.336755 TGCTCTTCGGCCTTTTGTTTC 59.663 47.619 0.00 0.00 0.00 2.78
2874 7792 1.338020 CTGCTCTTCGGCCTTTTGTTT 59.662 47.619 0.00 0.00 0.00 2.83
2875 7793 0.954452 CTGCTCTTCGGCCTTTTGTT 59.046 50.000 0.00 0.00 0.00 2.83
2876 7794 0.890996 CCTGCTCTTCGGCCTTTTGT 60.891 55.000 0.00 0.00 0.00 2.83
2877 7795 0.606401 TCCTGCTCTTCGGCCTTTTG 60.606 55.000 0.00 0.00 0.00 2.44
2878 7796 0.329596 ATCCTGCTCTTCGGCCTTTT 59.670 50.000 0.00 0.00 0.00 2.27
2879 7797 0.393537 CATCCTGCTCTTCGGCCTTT 60.394 55.000 0.00 0.00 0.00 3.11
2880 7798 1.222936 CATCCTGCTCTTCGGCCTT 59.777 57.895 0.00 0.00 0.00 4.35
2881 7799 1.267574 TTCATCCTGCTCTTCGGCCT 61.268 55.000 0.00 0.00 0.00 5.19
2882 7800 0.392998 TTTCATCCTGCTCTTCGGCC 60.393 55.000 0.00 0.00 0.00 6.13
2883 7801 1.453155 TTTTCATCCTGCTCTTCGGC 58.547 50.000 0.00 0.00 0.00 5.54
2884 7802 2.813754 TGTTTTTCATCCTGCTCTTCGG 59.186 45.455 0.00 0.00 0.00 4.30
2885 7803 3.748048 TCTGTTTTTCATCCTGCTCTTCG 59.252 43.478 0.00 0.00 0.00 3.79
2886 7804 5.335504 CCTTCTGTTTTTCATCCTGCTCTTC 60.336 44.000 0.00 0.00 0.00 2.87
2887 7805 4.522022 CCTTCTGTTTTTCATCCTGCTCTT 59.478 41.667 0.00 0.00 0.00 2.85
2888 7806 4.077822 CCTTCTGTTTTTCATCCTGCTCT 58.922 43.478 0.00 0.00 0.00 4.09
2889 7807 3.823304 ACCTTCTGTTTTTCATCCTGCTC 59.177 43.478 0.00 0.00 0.00 4.26
2890 7808 3.837355 ACCTTCTGTTTTTCATCCTGCT 58.163 40.909 0.00 0.00 0.00 4.24
2891 7809 5.241728 ACTTACCTTCTGTTTTTCATCCTGC 59.758 40.000 0.00 0.00 0.00 4.85
2892 7810 6.884280 ACTTACCTTCTGTTTTTCATCCTG 57.116 37.500 0.00 0.00 0.00 3.86
2893 7811 7.060421 TCAACTTACCTTCTGTTTTTCATCCT 58.940 34.615 0.00 0.00 0.00 3.24
2894 7812 7.272037 TCAACTTACCTTCTGTTTTTCATCC 57.728 36.000 0.00 0.00 0.00 3.51
2895 7813 7.327032 GCATCAACTTACCTTCTGTTTTTCATC 59.673 37.037 0.00 0.00 0.00 2.92
2896 7814 7.147976 GCATCAACTTACCTTCTGTTTTTCAT 58.852 34.615 0.00 0.00 0.00 2.57
2897 7815 6.096141 TGCATCAACTTACCTTCTGTTTTTCA 59.904 34.615 0.00 0.00 0.00 2.69
2898 7816 6.503524 TGCATCAACTTACCTTCTGTTTTTC 58.496 36.000 0.00 0.00 0.00 2.29
2899 7817 6.463995 TGCATCAACTTACCTTCTGTTTTT 57.536 33.333 0.00 0.00 0.00 1.94
2900 7818 5.507985 GCTGCATCAACTTACCTTCTGTTTT 60.508 40.000 0.00 0.00 0.00 2.43
2901 7819 4.022849 GCTGCATCAACTTACCTTCTGTTT 60.023 41.667 0.00 0.00 0.00 2.83
2902 7820 3.503748 GCTGCATCAACTTACCTTCTGTT 59.496 43.478 0.00 0.00 0.00 3.16
2903 7821 3.077359 GCTGCATCAACTTACCTTCTGT 58.923 45.455 0.00 0.00 0.00 3.41
2904 7822 3.341823 AGCTGCATCAACTTACCTTCTG 58.658 45.455 1.02 0.00 0.00 3.02
2905 7823 3.710209 AGCTGCATCAACTTACCTTCT 57.290 42.857 1.02 0.00 0.00 2.85
2906 7824 3.503748 ACAAGCTGCATCAACTTACCTTC 59.496 43.478 1.02 0.00 0.00 3.46
2907 7825 3.490348 ACAAGCTGCATCAACTTACCTT 58.510 40.909 1.02 0.00 0.00 3.50
2908 7826 3.146104 ACAAGCTGCATCAACTTACCT 57.854 42.857 1.02 0.00 0.00 3.08
2909 7827 3.253188 TCAACAAGCTGCATCAACTTACC 59.747 43.478 1.02 0.00 0.00 2.85
2910 7828 4.488126 TCAACAAGCTGCATCAACTTAC 57.512 40.909 1.02 0.00 0.00 2.34
2911 7829 5.112220 CTTCAACAAGCTGCATCAACTTA 57.888 39.130 1.02 0.00 0.00 2.24
2912 7830 3.973657 CTTCAACAAGCTGCATCAACTT 58.026 40.909 1.02 0.00 0.00 2.66
2913 7831 3.637998 CTTCAACAAGCTGCATCAACT 57.362 42.857 1.02 0.00 0.00 3.16
2924 7842 3.904136 AAAGATGGACGCTTCAACAAG 57.096 42.857 0.00 0.00 0.00 3.16
2925 7843 4.647424 AAAAAGATGGACGCTTCAACAA 57.353 36.364 0.00 0.00 0.00 2.83
2943 7861 2.229792 CACTCCCTAGTGCTGCAAAAA 58.770 47.619 2.77 0.00 46.28 1.94
2944 7862 1.896220 CACTCCCTAGTGCTGCAAAA 58.104 50.000 2.77 0.00 46.28 2.44
2945 7863 3.631453 CACTCCCTAGTGCTGCAAA 57.369 52.632 2.77 0.00 46.28 3.68
2958 7876 2.622436 CAAACTCTTCGGGATCACTCC 58.378 52.381 0.00 0.00 41.26 3.85
2959 7877 2.233922 TCCAAACTCTTCGGGATCACTC 59.766 50.000 0.00 0.00 0.00 3.51
2960 7878 2.257207 TCCAAACTCTTCGGGATCACT 58.743 47.619 0.00 0.00 0.00 3.41
2961 7879 2.762535 TCCAAACTCTTCGGGATCAC 57.237 50.000 0.00 0.00 0.00 3.06
2964 7882 2.171448 CCAGATCCAAACTCTTCGGGAT 59.829 50.000 0.00 0.00 42.66 3.85
2965 7883 1.555075 CCAGATCCAAACTCTTCGGGA 59.445 52.381 0.00 0.00 0.00 5.14
2966 7884 1.279271 ACCAGATCCAAACTCTTCGGG 59.721 52.381 0.00 0.00 0.00 5.14
2967 7885 2.028112 TGACCAGATCCAAACTCTTCGG 60.028 50.000 0.00 0.00 0.00 4.30
2968 7886 2.996621 GTGACCAGATCCAAACTCTTCG 59.003 50.000 0.00 0.00 0.00 3.79
2969 7887 3.339141 GGTGACCAGATCCAAACTCTTC 58.661 50.000 0.00 0.00 0.00 2.87
2970 7888 3.425162 GGTGACCAGATCCAAACTCTT 57.575 47.619 0.00 0.00 0.00 2.85
2985 7903 3.108376 ACTAGGAGAATTCTGGGGTGAC 58.892 50.000 14.00 0.00 0.00 3.67
2986 7904 3.012959 AGACTAGGAGAATTCTGGGGTGA 59.987 47.826 14.00 0.00 0.00 4.02
2987 7905 3.379452 AGACTAGGAGAATTCTGGGGTG 58.621 50.000 14.00 1.89 0.00 4.61
2988 7906 3.273618 AGAGACTAGGAGAATTCTGGGGT 59.726 47.826 14.00 6.21 0.00 4.95
2989 7907 3.922375 AGAGACTAGGAGAATTCTGGGG 58.078 50.000 14.00 2.96 0.00 4.96
2990 7908 5.076873 CCTAGAGACTAGGAGAATTCTGGG 58.923 50.000 14.00 2.61 36.85 4.45
2991 7909 4.522789 GCCTAGAGACTAGGAGAATTCTGG 59.477 50.000 23.71 4.22 36.85 3.86
2992 7910 4.215399 CGCCTAGAGACTAGGAGAATTCTG 59.785 50.000 23.71 0.33 36.75 3.02
2993 7911 4.394729 CGCCTAGAGACTAGGAGAATTCT 58.605 47.826 23.71 7.95 36.75 2.40
2994 7912 3.057806 GCGCCTAGAGACTAGGAGAATTC 60.058 52.174 24.82 0.00 36.75 2.17
2995 7913 2.888414 GCGCCTAGAGACTAGGAGAATT 59.112 50.000 24.82 0.00 36.75 2.17
2996 7914 2.510613 GCGCCTAGAGACTAGGAGAAT 58.489 52.381 24.82 0.00 36.75 2.40
2997 7915 1.477195 GGCGCCTAGAGACTAGGAGAA 60.477 57.143 22.15 0.00 36.75 2.87
2998 7916 0.108963 GGCGCCTAGAGACTAGGAGA 59.891 60.000 22.15 0.00 36.75 3.71
2999 7917 0.179015 TGGCGCCTAGAGACTAGGAG 60.179 60.000 29.70 21.35 36.85 3.69
3000 7918 0.478942 ATGGCGCCTAGAGACTAGGA 59.521 55.000 29.70 1.81 36.85 2.94
3001 7919 0.885196 GATGGCGCCTAGAGACTAGG 59.115 60.000 29.70 17.46 37.75 3.02
3002 7920 0.885196 GGATGGCGCCTAGAGACTAG 59.115 60.000 29.70 0.00 0.00 2.57
3003 7921 0.185175 TGGATGGCGCCTAGAGACTA 59.815 55.000 29.70 4.25 0.00 2.59
3004 7922 0.470833 ATGGATGGCGCCTAGAGACT 60.471 55.000 29.70 3.19 0.00 3.24
3005 7923 0.320247 CATGGATGGCGCCTAGAGAC 60.320 60.000 29.70 12.23 0.00 3.36
3006 7924 0.760567 ACATGGATGGCGCCTAGAGA 60.761 55.000 29.70 7.00 0.00 3.10
3007 7925 0.602106 CACATGGATGGCGCCTAGAG 60.602 60.000 29.70 14.73 0.00 2.43
3008 7926 1.447217 CACATGGATGGCGCCTAGA 59.553 57.895 29.70 7.94 0.00 2.43
3009 7927 2.256591 GCACATGGATGGCGCCTAG 61.257 63.158 29.70 12.91 0.00 3.02
3010 7928 2.203195 GCACATGGATGGCGCCTA 60.203 61.111 29.70 14.84 0.00 3.93
3011 7929 4.119363 AGCACATGGATGGCGCCT 62.119 61.111 29.70 13.55 32.69 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.