Multiple sequence alignment - TraesCS2D01G466400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G466400 chr2D 100.000 7394 0 0 1 7394 572029335 572036728 0.000000e+00 13655.0
1 TraesCS2D01G466400 chr2D 75.775 1226 250 31 1436 2639 572067612 572068812 6.430000e-160 575.0
2 TraesCS2D01G466400 chr2D 96.530 317 8 3 6761 7074 179185695 179186011 8.500000e-144 521.0
3 TraesCS2D01G466400 chr2D 96.440 309 10 1 6766 7073 202604712 202604404 6.620000e-140 508.0
4 TraesCS2D01G466400 chr2D 77.742 629 131 7 4035 4657 572069037 572069662 1.950000e-100 377.0
5 TraesCS2D01G466400 chr2D 87.365 277 28 7 3763 4034 8972112 8972386 2.000000e-80 311.0
6 TraesCS2D01G466400 chr2D 87.121 264 31 3 2888 3149 8971171 8971433 5.610000e-76 296.0
7 TraesCS2D01G466400 chr2D 90.043 231 19 4 3805 4034 575685180 575684953 5.610000e-76 296.0
8 TraesCS2D01G466400 chr2B 95.408 1960 81 7 935 2887 685266287 685268244 0.000000e+00 3112.0
9 TraesCS2D01G466400 chr2B 85.968 1069 126 17 5592 6653 685269832 685270883 0.000000e+00 1122.0
10 TraesCS2D01G466400 chr2B 95.082 671 33 0 4035 4705 685268236 685268906 0.000000e+00 1057.0
11 TraesCS2D01G466400 chr2B 90.759 790 43 15 130 901 685265385 685266162 0.000000e+00 1027.0
12 TraesCS2D01G466400 chr2B 89.186 749 66 13 5961 6705 686458287 686459024 0.000000e+00 920.0
13 TraesCS2D01G466400 chr2B 83.234 1002 128 28 5592 6584 685816277 685817247 0.000000e+00 883.0
14 TraesCS2D01G466400 chr2B 92.034 590 35 7 4802 5379 685268901 685269490 0.000000e+00 819.0
15 TraesCS2D01G466400 chr2B 78.859 1244 222 33 1663 2887 686455145 686456366 0.000000e+00 802.0
16 TraesCS2D01G466400 chr2B 84.891 781 82 13 4811 5555 685744709 685745489 0.000000e+00 756.0
17 TraesCS2D01G466400 chr2B 77.855 1287 235 34 1629 2887 686811559 686812823 0.000000e+00 752.0
18 TraesCS2D01G466400 chr2B 89.483 580 49 7 4811 5378 685815352 685815931 0.000000e+00 723.0
19 TraesCS2D01G466400 chr2B 89.310 580 50 7 4811 5378 685804109 685804688 0.000000e+00 717.0
20 TraesCS2D01G466400 chr2B 77.496 1262 238 37 1625 2869 685802190 685803422 0.000000e+00 715.0
21 TraesCS2D01G466400 chr2B 88.966 580 51 8 4811 5378 685806104 685806682 0.000000e+00 704.0
22 TraesCS2D01G466400 chr2B 88.850 574 52 7 4811 5372 686457031 686457604 0.000000e+00 695.0
23 TraesCS2D01G466400 chr2B 88.621 580 53 6 4811 5378 685808094 685808672 0.000000e+00 693.0
24 TraesCS2D01G466400 chr2B 86.587 589 64 9 5592 6174 685745619 685746198 2.910000e-178 636.0
25 TraesCS2D01G466400 chr2B 79.412 816 125 29 5958 6754 686050101 686050892 3.040000e-148 536.0
26 TraesCS2D01G466400 chr2B 76.781 814 148 32 5955 6746 686814702 686815496 1.150000e-112 418.0
27 TraesCS2D01G466400 chr2B 82.119 453 69 6 2423 2869 685808955 685809401 1.950000e-100 377.0
28 TraesCS2D01G466400 chr2B 84.433 379 53 5 6276 6653 685746225 685746598 1.170000e-97 368.0
29 TraesCS2D01G466400 chr2B 81.678 453 71 6 2423 2869 685804971 685805417 4.220000e-97 366.0
30 TraesCS2D01G466400 chr2B 78.261 598 107 17 4037 4627 686812817 686813398 5.450000e-96 363.0
31 TraesCS2D01G466400 chr2B 85.093 322 41 6 2885 3203 641087091 641086774 9.250000e-84 322.0
32 TraesCS2D01G466400 chr2B 94.898 196 9 1 7199 7394 686459419 686459613 9.320000e-79 305.0
33 TraesCS2D01G466400 chr2B 95.455 132 1 1 7070 7201 686459136 686459262 9.720000e-49 206.0
34 TraesCS2D01G466400 chr2B 80.000 270 50 4 606 874 686045633 686045899 5.850000e-46 196.0
35 TraesCS2D01G466400 chr2B 77.622 286 59 3 999 1280 686810585 686810869 1.280000e-37 169.0
36 TraesCS2D01G466400 chr2B 80.870 230 25 9 5625 5853 686458004 686458215 5.940000e-36 163.0
37 TraesCS2D01G466400 chr2B 79.039 229 43 3 1060 1287 686046189 686046413 1.280000e-32 152.0
38 TraesCS2D01G466400 chr2B 100.000 42 0 0 81 122 685265226 685265267 2.210000e-10 78.7
39 TraesCS2D01G466400 chr2B 94.595 37 2 0 606 642 685795404 685795440 2.880000e-04 58.4
40 TraesCS2D01G466400 chr2B 100.000 30 0 0 6721 6750 686459023 686459052 1.000000e-03 56.5
41 TraesCS2D01G466400 chr7D 98.607 1149 15 1 2886 4034 575144520 575145667 0.000000e+00 2032.0
42 TraesCS2D01G466400 chr7D 85.855 304 32 6 2888 3190 626028628 626028921 5.570000e-81 313.0
43 TraesCS2D01G466400 chr7D 84.762 315 37 7 2888 3191 140293123 140293437 9.320000e-79 305.0
44 TraesCS2D01G466400 chr7D 89.231 65 7 0 809 873 638657901 638657837 1.710000e-11 82.4
45 TraesCS2D01G466400 chr2A 91.353 1353 104 3 1339 2682 710800375 710801723 0.000000e+00 1838.0
46 TraesCS2D01G466400 chr2A 87.777 1579 140 26 1350 2887 710650982 710652548 0.000000e+00 1797.0
47 TraesCS2D01G466400 chr2A 87.841 1357 150 9 4035 5379 710652540 710653893 0.000000e+00 1578.0
48 TraesCS2D01G466400 chr2A 86.211 805 96 14 5953 6753 710654578 710655371 0.000000e+00 857.0
49 TraesCS2D01G466400 chr2A 79.062 1280 228 24 1629 2887 711036927 711038187 0.000000e+00 843.0
50 TraesCS2D01G466400 chr2A 91.290 597 45 3 4035 4630 710801950 710802540 0.000000e+00 808.0
51 TraesCS2D01G466400 chr2A 90.361 581 44 7 4811 5379 710802598 710803178 0.000000e+00 752.0
52 TraesCS2D01G466400 chr2A 90.830 458 28 8 479 936 710647881 710648324 1.060000e-167 601.0
53 TraesCS2D01G466400 chr2A 83.491 636 81 15 6016 6647 710803978 710804593 8.320000e-159 571.0
54 TraesCS2D01G466400 chr2A 92.714 398 22 5 928 1323 710799706 710800098 1.080000e-157 568.0
55 TraesCS2D01G466400 chr2A 89.639 415 41 2 5592 6005 710803523 710803936 1.830000e-145 527.0
56 TraesCS2D01G466400 chr2A 78.034 824 141 26 5953 6754 711049699 711050504 4.010000e-132 483.0
57 TraesCS2D01G466400 chr2A 81.117 609 93 13 4796 5387 710758364 710758967 1.120000e-127 468.0
58 TraesCS2D01G466400 chr2A 77.603 826 135 34 5957 6754 710759548 710760351 8.750000e-124 455.0
59 TraesCS2D01G466400 chr2A 77.518 814 137 30 5951 6738 711062762 711063555 1.460000e-121 448.0
60 TraesCS2D01G466400 chr2A 86.378 323 28 9 635 955 702085155 702084847 9.190000e-89 339.0
61 TraesCS2D01G466400 chr2A 91.393 244 21 0 2644 2887 710801715 710801958 1.190000e-87 335.0
62 TraesCS2D01G466400 chr2A 92.982 228 12 2 495 718 710799372 710799599 5.530000e-86 329.0
63 TraesCS2D01G466400 chr2A 87.324 284 34 2 606 889 710755246 710755527 2.570000e-84 324.0
64 TraesCS2D01G466400 chr2A 79.592 392 70 6 4243 4629 711061034 711061420 9.450000e-69 272.0
65 TraesCS2D01G466400 chr2A 94.444 162 8 1 480 640 702109240 702109079 1.590000e-61 248.0
66 TraesCS2D01G466400 chr2A 91.935 124 5 1 7070 7193 710655452 710655570 1.280000e-37 169.0
67 TraesCS2D01G466400 chr1A 93.588 1154 60 8 2889 4033 369363943 369362795 0.000000e+00 1709.0
68 TraesCS2D01G466400 chr1A 96.774 310 9 1 6764 7072 96240609 96240300 3.960000e-142 516.0
69 TraesCS2D01G466400 chr1A 96.463 311 10 1 6764 7073 162067300 162067610 5.120000e-141 512.0
70 TraesCS2D01G466400 chr1A 96.667 300 9 1 6775 7073 166212731 166213030 1.430000e-136 497.0
71 TraesCS2D01G466400 chr7B 79.117 1178 166 44 2888 4034 2759198 2758070 0.000000e+00 739.0
72 TraesCS2D01G466400 chr3B 97.419 310 7 1 6764 7072 739335547 739335238 1.830000e-145 527.0
73 TraesCS2D01G466400 chr5A 95.498 311 12 2 6764 7072 224156256 224155946 5.150000e-136 496.0
74 TraesCS2D01G466400 chr5A 82.161 398 44 15 2888 3259 28396245 28396641 4.310000e-82 316.0
75 TraesCS2D01G466400 chr5A 89.540 239 20 5 3804 4039 28419548 28419784 1.560000e-76 298.0
76 TraesCS2D01G466400 chr3D 95.738 305 11 2 6766 7069 447631631 447631934 2.400000e-134 490.0
77 TraesCS2D01G466400 chr7A 95.161 310 13 2 6763 7070 149308603 149308912 8.620000e-134 488.0
78 TraesCS2D01G466400 chr7A 79.592 147 22 6 729 872 5525403 5525544 1.700000e-16 99.0
79 TraesCS2D01G466400 chr7A 85.714 77 11 0 797 873 726734062 726734138 1.710000e-11 82.4
80 TraesCS2D01G466400 chr6B 85.092 436 38 13 3473 3906 674191081 674190671 3.190000e-113 420.0
81 TraesCS2D01G466400 chr5D 83.511 376 45 11 2888 3246 456595166 456594791 1.190000e-87 335.0
82 TraesCS2D01G466400 chr5D 88.976 254 28 0 3780 4033 443905663 443905916 1.550000e-81 315.0
83 TraesCS2D01G466400 chr5D 84.688 320 35 9 2888 3195 406476912 406476595 2.590000e-79 307.0
84 TraesCS2D01G466400 chr5D 88.281 256 30 0 3780 4035 456594367 456594112 2.590000e-79 307.0
85 TraesCS2D01G466400 chr5B 85.484 310 39 6 2887 3194 52309392 52309697 1.200000e-82 318.0
86 TraesCS2D01G466400 chr1D 86.833 281 30 7 3763 4038 75917068 75916790 2.590000e-79 307.0
87 TraesCS2D01G466400 chr1D 79.882 338 47 13 2888 3206 22029309 22029644 2.080000e-55 228.0
88 TraesCS2D01G466400 chr4D 84.161 322 41 6 2887 3203 504890415 504890731 3.350000e-78 303.0
89 TraesCS2D01G466400 chr6D 77.736 265 56 3 4064 4325 467800283 467800019 7.680000e-35 159.0
90 TraesCS2D01G466400 chr6D 89.189 74 6 2 809 881 467815496 467815424 2.840000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G466400 chr2D 572029335 572036728 7393 False 13655.000000 13655 100.000000 1 7394 1 chr2D.!!$F2 7393
1 TraesCS2D01G466400 chr2D 572067612 572069662 2050 False 476.000000 575 76.758500 1436 4657 2 chr2D.!!$F4 3221
2 TraesCS2D01G466400 chr2D 8971171 8972386 1215 False 303.500000 311 87.243000 2888 4034 2 chr2D.!!$F3 1146
3 TraesCS2D01G466400 chr2B 685265226 685270883 5657 False 1202.616667 3112 93.208500 81 6653 6 chr2B.!!$F2 6572
4 TraesCS2D01G466400 chr2B 685815352 685817247 1895 False 803.000000 883 86.358500 4811 6584 2 chr2B.!!$F5 1773
5 TraesCS2D01G466400 chr2B 685802190 685809401 7211 False 595.333333 717 84.698333 1625 5378 6 chr2B.!!$F4 3753
6 TraesCS2D01G466400 chr2B 685744709 685746598 1889 False 586.666667 756 85.303667 4811 6653 3 chr2B.!!$F3 1842
7 TraesCS2D01G466400 chr2B 686455145 686459613 4468 False 449.642857 920 89.731143 1663 7394 7 chr2B.!!$F7 5731
8 TraesCS2D01G466400 chr2B 686810585 686815496 4911 False 425.500000 752 77.629750 999 6746 4 chr2B.!!$F8 5747
9 TraesCS2D01G466400 chr2B 686045633 686050892 5259 False 294.666667 536 79.483667 606 6754 3 chr2B.!!$F6 6148
10 TraesCS2D01G466400 chr7D 575144520 575145667 1147 False 2032.000000 2032 98.607000 2886 4034 1 chr7D.!!$F2 1148
11 TraesCS2D01G466400 chr2A 710647881 710655570 7689 False 1000.400000 1797 88.918800 479 7193 5 chr2A.!!$F3 6714
12 TraesCS2D01G466400 chr2A 711036927 711038187 1260 False 843.000000 843 79.062000 1629 2887 1 chr2A.!!$F1 1258
13 TraesCS2D01G466400 chr2A 710799372 710804593 5221 False 716.000000 1838 90.402875 495 6647 8 chr2A.!!$F5 6152
14 TraesCS2D01G466400 chr2A 711049699 711050504 805 False 483.000000 483 78.034000 5953 6754 1 chr2A.!!$F2 801
15 TraesCS2D01G466400 chr2A 710755246 710760351 5105 False 415.666667 468 82.014667 606 6754 3 chr2A.!!$F4 6148
16 TraesCS2D01G466400 chr2A 711061034 711063555 2521 False 360.000000 448 78.555000 4243 6738 2 chr2A.!!$F6 2495
17 TraesCS2D01G466400 chr1A 369362795 369363943 1148 True 1709.000000 1709 93.588000 2889 4033 1 chr1A.!!$R2 1144
18 TraesCS2D01G466400 chr7B 2758070 2759198 1128 True 739.000000 739 79.117000 2888 4034 1 chr7B.!!$R1 1146
19 TraesCS2D01G466400 chr5D 456594112 456595166 1054 True 321.000000 335 85.896000 2888 4035 2 chr5D.!!$R2 1147

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
42 43 0.037590 GTGTTGTGGCCTGGGTATGA 59.962 55.000 3.32 0.00 0.00 2.15 F
67 68 0.110238 CGTTGGGTTGTTCGAGCATG 60.110 55.000 1.75 0.00 0.00 4.06 F
1592 4822 0.332972 AGGACATCCAAGGGGCTTTC 59.667 55.000 0.00 0.00 38.89 2.62 F
1627 4857 1.275291 GGCATATGGACCTAGCGCTAA 59.725 52.381 19.37 3.05 0.00 3.09 F
2311 5547 3.064900 AGCAGAGAAGTTAAAGGGCAG 57.935 47.619 0.00 0.00 0.00 4.85 F
2748 8035 3.244976 CACGATTTTGCAAGGATGGTTC 58.755 45.455 0.00 0.00 0.00 3.62 F
4289 10078 2.247358 TGGTGCTTCCCCTCAAATTTC 58.753 47.619 0.00 0.00 34.77 2.17 F
4784 10588 0.039472 CCAATGGGTGATGGTGACCA 59.961 55.000 6.84 6.84 38.19 4.02 F
5716 13803 0.106819 AGATGAGGCATTGACCTGGC 60.107 55.000 4.63 0.00 41.32 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1239 2659 0.329596 GATGGGCTCCAGGTGTCTTT 59.670 55.000 0.41 0.0 36.75 2.52 R
1608 4838 2.743636 TTAGCGCTAGGTCCATATGC 57.256 50.000 17.98 0.0 0.00 3.14 R
2709 7996 0.839277 TGCATGGGACCAGACATAGG 59.161 55.000 0.00 0.0 0.00 2.57 R
2748 8035 0.947244 GTTGCACACTCAGTCCTTGG 59.053 55.000 0.00 0.0 0.00 3.61 R
4038 9788 4.356405 TGCATTTCTCAGGTTCTCTTCA 57.644 40.909 0.00 0.0 0.00 3.02 R
4672 10476 0.106149 AGCTCCTCGTTTTTGTCCGT 59.894 50.000 0.00 0.0 0.00 4.69 R
6011 14110 0.179163 GGGTTGCAGCGTTTCTATGC 60.179 55.000 0.00 0.0 40.40 3.14 R
6196 14327 0.249120 ACATTCATTCGACCGAGGCA 59.751 50.000 0.00 0.0 0.00 4.75 R
7001 15187 0.106519 ATAGGGTTGGAGTGGCATGC 60.107 55.000 9.90 9.9 0.00 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.604843 ATCTTGAATGTGTGTATGTGCG 57.395 40.909 0.00 0.00 0.00 5.34
22 23 3.398406 TCTTGAATGTGTGTATGTGCGT 58.602 40.909 0.00 0.00 0.00 5.24
23 24 3.186205 TCTTGAATGTGTGTATGTGCGTG 59.814 43.478 0.00 0.00 0.00 5.34
24 25 2.488952 TGAATGTGTGTATGTGCGTGT 58.511 42.857 0.00 0.00 0.00 4.49
25 26 2.222911 TGAATGTGTGTATGTGCGTGTG 59.777 45.455 0.00 0.00 0.00 3.82
26 27 1.877637 ATGTGTGTATGTGCGTGTGT 58.122 45.000 0.00 0.00 0.00 3.72
27 28 1.657822 TGTGTGTATGTGCGTGTGTT 58.342 45.000 0.00 0.00 0.00 3.32
28 29 1.328986 TGTGTGTATGTGCGTGTGTTG 59.671 47.619 0.00 0.00 0.00 3.33
29 30 1.329292 GTGTGTATGTGCGTGTGTTGT 59.671 47.619 0.00 0.00 0.00 3.32
30 31 1.328986 TGTGTATGTGCGTGTGTTGTG 59.671 47.619 0.00 0.00 0.00 3.33
31 32 0.940833 TGTATGTGCGTGTGTTGTGG 59.059 50.000 0.00 0.00 0.00 4.17
32 33 0.385473 GTATGTGCGTGTGTTGTGGC 60.385 55.000 0.00 0.00 0.00 5.01
33 34 1.511318 TATGTGCGTGTGTTGTGGCC 61.511 55.000 0.00 0.00 0.00 5.36
34 35 3.209097 GTGCGTGTGTTGTGGCCT 61.209 61.111 3.32 0.00 0.00 5.19
35 36 3.208383 TGCGTGTGTTGTGGCCTG 61.208 61.111 3.32 0.00 0.00 4.85
36 37 3.964875 GCGTGTGTTGTGGCCTGG 61.965 66.667 3.32 0.00 0.00 4.45
37 38 3.286751 CGTGTGTTGTGGCCTGGG 61.287 66.667 3.32 0.00 0.00 4.45
38 39 2.123897 GTGTGTTGTGGCCTGGGT 60.124 61.111 3.32 0.00 0.00 4.51
39 40 1.149627 GTGTGTTGTGGCCTGGGTA 59.850 57.895 3.32 0.00 0.00 3.69
40 41 0.251165 GTGTGTTGTGGCCTGGGTAT 60.251 55.000 3.32 0.00 0.00 2.73
41 42 0.251121 TGTGTTGTGGCCTGGGTATG 60.251 55.000 3.32 0.00 0.00 2.39
42 43 0.037590 GTGTTGTGGCCTGGGTATGA 59.962 55.000 3.32 0.00 0.00 2.15
43 44 0.327924 TGTTGTGGCCTGGGTATGAG 59.672 55.000 3.32 0.00 0.00 2.90
44 45 0.394352 GTTGTGGCCTGGGTATGAGG 60.394 60.000 3.32 0.00 0.00 3.86
45 46 1.570857 TTGTGGCCTGGGTATGAGGG 61.571 60.000 3.32 0.00 0.00 4.30
46 47 1.692749 GTGGCCTGGGTATGAGGGA 60.693 63.158 3.32 0.00 0.00 4.20
47 48 1.062488 GTGGCCTGGGTATGAGGGAT 61.062 60.000 3.32 0.00 0.00 3.85
48 49 0.768221 TGGCCTGGGTATGAGGGATC 60.768 60.000 3.32 0.00 0.00 3.36
49 50 1.674057 GCCTGGGTATGAGGGATCG 59.326 63.158 0.00 0.00 0.00 3.69
50 51 1.122019 GCCTGGGTATGAGGGATCGT 61.122 60.000 0.00 0.00 0.00 3.73
51 52 1.424638 CCTGGGTATGAGGGATCGTT 58.575 55.000 0.00 0.00 0.00 3.85
52 53 1.070758 CCTGGGTATGAGGGATCGTTG 59.929 57.143 0.00 0.00 0.00 4.10
53 54 1.070758 CTGGGTATGAGGGATCGTTGG 59.929 57.143 0.00 0.00 0.00 3.77
54 55 0.396811 GGGTATGAGGGATCGTTGGG 59.603 60.000 0.00 0.00 0.00 4.12
55 56 1.129058 GGTATGAGGGATCGTTGGGT 58.871 55.000 0.00 0.00 0.00 4.51
56 57 1.489230 GGTATGAGGGATCGTTGGGTT 59.511 52.381 0.00 0.00 0.00 4.11
57 58 2.561569 GTATGAGGGATCGTTGGGTTG 58.438 52.381 0.00 0.00 0.00 3.77
58 59 0.991920 ATGAGGGATCGTTGGGTTGT 59.008 50.000 0.00 0.00 0.00 3.32
59 60 0.768622 TGAGGGATCGTTGGGTTGTT 59.231 50.000 0.00 0.00 0.00 2.83
60 61 1.271163 TGAGGGATCGTTGGGTTGTTC 60.271 52.381 0.00 0.00 0.00 3.18
61 62 0.321298 AGGGATCGTTGGGTTGTTCG 60.321 55.000 0.00 0.00 0.00 3.95
62 63 0.320946 GGGATCGTTGGGTTGTTCGA 60.321 55.000 0.00 0.00 36.77 3.71
63 64 1.076332 GGATCGTTGGGTTGTTCGAG 58.924 55.000 0.00 0.00 35.85 4.04
64 65 0.442699 GATCGTTGGGTTGTTCGAGC 59.557 55.000 0.00 0.00 35.85 5.03
65 66 0.250124 ATCGTTGGGTTGTTCGAGCA 60.250 50.000 0.00 0.00 35.85 4.26
66 67 0.250124 TCGTTGGGTTGTTCGAGCAT 60.250 50.000 1.75 0.00 0.00 3.79
67 68 0.110238 CGTTGGGTTGTTCGAGCATG 60.110 55.000 1.75 0.00 0.00 4.06
68 69 1.234821 GTTGGGTTGTTCGAGCATGA 58.765 50.000 1.75 0.00 0.00 3.07
69 70 1.197721 GTTGGGTTGTTCGAGCATGAG 59.802 52.381 1.75 0.00 0.00 2.90
70 71 0.396435 TGGGTTGTTCGAGCATGAGT 59.604 50.000 1.75 0.00 0.00 3.41
71 72 0.798776 GGGTTGTTCGAGCATGAGTG 59.201 55.000 1.75 0.00 0.00 3.51
72 73 1.512926 GGTTGTTCGAGCATGAGTGT 58.487 50.000 1.75 0.00 0.00 3.55
73 74 1.873591 GGTTGTTCGAGCATGAGTGTT 59.126 47.619 1.75 0.00 0.00 3.32
74 75 2.290641 GGTTGTTCGAGCATGAGTGTTT 59.709 45.455 1.75 0.00 0.00 2.83
75 76 3.243068 GGTTGTTCGAGCATGAGTGTTTT 60.243 43.478 1.75 0.00 0.00 2.43
76 77 4.351192 GTTGTTCGAGCATGAGTGTTTTT 58.649 39.130 1.75 0.00 0.00 1.94
122 123 5.754782 AGCATGAGTGTTTTGGGTATCATA 58.245 37.500 0.00 0.00 0.00 2.15
125 126 6.095440 GCATGAGTGTTTTGGGTATCATACTT 59.905 38.462 0.00 0.00 0.00 2.24
127 128 7.681939 TGAGTGTTTTGGGTATCATACTTTC 57.318 36.000 0.00 0.00 0.00 2.62
128 129 7.227873 TGAGTGTTTTGGGTATCATACTTTCA 58.772 34.615 0.00 0.00 0.00 2.69
139 250 4.085357 TCATACTTTCAGGTTGTGCTGT 57.915 40.909 0.00 0.00 0.00 4.40
180 291 9.814899 TTGAATTGAATTTATGTGTTTCACTGT 57.185 25.926 0.00 0.00 35.11 3.55
203 314 6.927936 TGTTTATTTTGCATACACAAGCATGT 59.072 30.769 0.00 0.00 40.94 3.21
204 315 7.440556 TGTTTATTTTGCATACACAAGCATGTT 59.559 29.630 0.00 0.00 40.94 2.71
205 316 7.959689 TTATTTTGCATACACAAGCATGTTT 57.040 28.000 0.00 0.00 40.94 2.83
206 317 6.864360 ATTTTGCATACACAAGCATGTTTT 57.136 29.167 0.00 0.00 40.94 2.43
207 318 6.674694 TTTTGCATACACAAGCATGTTTTT 57.325 29.167 0.00 0.00 40.94 1.94
239 360 5.871524 TGAGAATAGCTTGTAAACTGCTGAG 59.128 40.000 0.00 0.00 37.62 3.35
242 363 2.498167 AGCTTGTAAACTGCTGAGGTG 58.502 47.619 0.00 0.00 35.54 4.00
251 372 1.908340 CTGCTGAGGTGGGCTAGCTT 61.908 60.000 15.72 0.00 37.23 3.74
291 412 1.929482 GCCGGATCGTCGAGGATAAAC 60.929 57.143 19.82 12.32 0.00 2.01
302 423 3.709653 TCGAGGATAAACATGGGCTAACT 59.290 43.478 0.00 0.00 0.00 2.24
387 508 6.003326 CACATCAGCCCAATATACACCATTA 58.997 40.000 0.00 0.00 0.00 1.90
391 512 8.587608 CATCAGCCCAATATACACCATTAAATT 58.412 33.333 0.00 0.00 0.00 1.82
413 534 1.012486 CGACGTTACTTCCCACCTGC 61.012 60.000 0.00 0.00 0.00 4.85
441 562 4.808895 TGGTCGATGGAGAAAAATCATACG 59.191 41.667 0.00 0.00 0.00 3.06
442 563 4.809426 GGTCGATGGAGAAAAATCATACGT 59.191 41.667 0.00 0.00 0.00 3.57
443 564 5.981315 GGTCGATGGAGAAAAATCATACGTA 59.019 40.000 0.00 0.00 0.00 3.57
444 565 6.074463 GGTCGATGGAGAAAAATCATACGTAC 60.074 42.308 0.00 0.00 0.00 3.67
465 586 1.134220 TCGTCCATGGAGTAAATGCCC 60.134 52.381 16.81 0.00 0.00 5.36
473 594 1.272480 GGAGTAAATGCCCTGTGGGTT 60.272 52.381 4.42 0.00 46.51 4.11
490 611 1.141053 GGTTGTGTCTGGTGTTCCTCT 59.859 52.381 0.00 0.00 34.23 3.69
563 700 3.829048 TCGATCTCGAGACCTGCC 58.171 61.111 19.30 4.05 44.22 4.85
652 789 0.820871 GACCATCCTTGCGACTCTCT 59.179 55.000 0.00 0.00 0.00 3.10
769 906 4.101448 CTGTGAAGGGGAGGGCGG 62.101 72.222 0.00 0.00 0.00 6.13
925 1131 7.386025 CACTGGTGTATATCCAATCTATGTGTG 59.614 40.741 2.17 0.00 34.35 3.82
987 1349 0.669619 TCGGCACAGTTACGAGTGAA 59.330 50.000 13.42 0.00 37.97 3.18
1239 2659 4.530710 AGAGCATTCCGTAACTTGTACA 57.469 40.909 0.00 0.00 0.00 2.90
1244 2664 5.178809 AGCATTCCGTAACTTGTACAAAGAC 59.821 40.000 10.03 6.90 0.00 3.01
1375 4589 3.622166 TTTCTTCTGATAACCGACCCC 57.378 47.619 0.00 0.00 0.00 4.95
1403 4624 0.525761 TTTCTTATTGCAGCACCGGC 59.474 50.000 0.00 0.00 41.61 6.13
1537 4764 2.167487 GGGACAAGGCTGAGTTCTCTAG 59.833 54.545 0.00 0.00 0.00 2.43
1562 4789 9.930158 AGTAGGATAATTAAAATTACTGGCCAA 57.070 29.630 7.01 0.00 34.01 4.52
1592 4822 0.332972 AGGACATCCAAGGGGCTTTC 59.667 55.000 0.00 0.00 38.89 2.62
1608 4838 4.216472 GGGCTTTCAGTAAAGTTCTTGAGG 59.784 45.833 0.00 0.00 43.44 3.86
1627 4857 1.275291 GGCATATGGACCTAGCGCTAA 59.725 52.381 19.37 3.05 0.00 3.09
1736 4966 6.253746 CAGAGTTGCGGAAAAGAATAAGATG 58.746 40.000 0.00 0.00 0.00 2.90
1832 5065 3.743396 AGACAACTCTCGCTCAATTTGTC 59.257 43.478 4.47 4.47 41.98 3.18
2241 5477 3.191162 GCTCAAGTCATGTGCATTTGGTA 59.809 43.478 0.00 0.00 45.60 3.25
2271 5507 6.416631 ACTATAAAGGTCCGGGAAATCTAC 57.583 41.667 0.00 0.00 0.00 2.59
2311 5547 3.064900 AGCAGAGAAGTTAAAGGGCAG 57.935 47.619 0.00 0.00 0.00 4.85
2424 5660 3.810687 TTGGGACTCAGTGGGGGCT 62.811 63.158 0.00 0.00 0.00 5.19
2722 8009 5.568620 ATTTGGTATCCTATGTCTGGTCC 57.431 43.478 0.00 0.00 0.00 4.46
2748 8035 3.244976 CACGATTTTGCAAGGATGGTTC 58.755 45.455 0.00 0.00 0.00 3.62
2883 8173 5.296780 ACCATACCTCGCAATATCAAGTTTG 59.703 40.000 0.00 0.00 0.00 2.93
2884 8174 5.527214 CCATACCTCGCAATATCAAGTTTGA 59.473 40.000 0.00 0.00 42.14 2.69
4035 9785 4.849926 CGATGTTTTCTGCAATTCACTCAG 59.150 41.667 0.00 0.00 0.00 3.35
4036 9786 5.561532 CGATGTTTTCTGCAATTCACTCAGT 60.562 40.000 0.00 0.00 0.00 3.41
4037 9787 5.581126 TGTTTTCTGCAATTCACTCAGTT 57.419 34.783 0.00 0.00 0.00 3.16
4038 9788 5.964758 TGTTTTCTGCAATTCACTCAGTTT 58.035 33.333 0.00 0.00 0.00 2.66
4122 9872 3.675698 GGCACTACGACTCTTTCTTCTTG 59.324 47.826 0.00 0.00 0.00 3.02
4289 10078 2.247358 TGGTGCTTCCCCTCAAATTTC 58.753 47.619 0.00 0.00 34.77 2.17
4449 10250 3.181509 GCATGACATCACTTCAAGAGCTG 60.182 47.826 0.00 0.00 0.00 4.24
4464 10265 5.124457 TCAAGAGCTGCATGATTTTAAGGTC 59.876 40.000 1.02 0.00 36.00 3.85
4640 10444 3.268023 CTGGAAGGATACCTTGTCACC 57.732 52.381 7.81 3.80 44.82 4.02
4669 10473 7.947332 AGGAATATGACACTAGCTCTGAATCTA 59.053 37.037 0.00 0.00 0.00 1.98
4672 10476 9.800572 AATATGACACTAGCTCTGAATCTACTA 57.199 33.333 0.00 0.00 0.00 1.82
4674 10478 5.524281 TGACACTAGCTCTGAATCTACTACG 59.476 44.000 0.00 0.00 0.00 3.51
4711 10515 5.314529 AGCTCTCACCAATGGATGATATTG 58.685 41.667 6.16 0.00 35.75 1.90
4718 10522 5.995565 CCAATGGATGATATTGGCTCATT 57.004 39.130 0.00 0.00 45.59 2.57
4737 10541 5.327732 TCATTTTCTGAGCCTTCTTTGGAT 58.672 37.500 0.00 0.00 0.00 3.41
4740 10544 8.274322 TCATTTTCTGAGCCTTCTTTGGATATA 58.726 33.333 0.00 0.00 0.00 0.86
4750 10554 8.548877 AGCCTTCTTTGGATATAGTAGAAACAA 58.451 33.333 0.00 0.00 0.00 2.83
4772 10576 1.000521 TGGAGCTCTTGCCAATGGG 60.001 57.895 14.64 0.00 40.80 4.00
4781 10585 0.113972 TTGCCAATGGGTGATGGTGA 59.886 50.000 0.00 0.00 39.00 4.02
4784 10588 0.039472 CCAATGGGTGATGGTGACCA 59.961 55.000 6.84 6.84 38.19 4.02
4787 10591 1.923356 ATGGGTGATGGTGACCAAAC 58.077 50.000 9.06 10.42 36.95 2.93
4789 10593 1.247567 GGGTGATGGTGACCAAACTG 58.752 55.000 9.06 0.00 36.95 3.16
4790 10594 1.202879 GGGTGATGGTGACCAAACTGA 60.203 52.381 9.06 0.00 36.95 3.41
5189 11005 9.816354 TGATCTGTTTGAGAACGATGATAATTA 57.184 29.630 0.00 0.00 38.65 1.40
5259 11075 7.664552 TCTGAATTATTGCCCTCATTTGAAT 57.335 32.000 0.00 0.00 0.00 2.57
5314 11130 8.314751 CCTTTTCTAAGGTACTCATCAGAGAAA 58.685 37.037 0.00 0.00 45.01 2.52
5338 11157 6.740944 TTCCAAGATTTCCGTATATGGAGA 57.259 37.500 13.42 10.06 39.72 3.71
5343 11162 7.649705 CCAAGATTTCCGTATATGGAGATATCG 59.350 40.741 15.28 4.00 39.72 2.92
5501 13346 9.630098 TTCATTCAAAGATTTTAGTCATCTTGC 57.370 29.630 0.00 0.00 39.61 4.01
5523 13368 8.785329 TTGCCTCTTTAACAAGTTTGAAAATT 57.215 26.923 0.00 0.00 0.00 1.82
5534 13379 3.868661 AGTTTGAAAATTGGAAACCGTGC 59.131 39.130 0.00 0.00 31.21 5.34
5560 13405 4.950050 ACTTTTCTCTTCAGATGTGACGT 58.050 39.130 0.00 0.00 30.10 4.34
5604 13556 3.055819 TGACAGCTGTAGAGGAATTGACC 60.056 47.826 21.73 2.65 0.00 4.02
5631 13583 4.853196 GCATATTGCGCACATATAACAAGG 59.147 41.667 11.12 5.49 31.71 3.61
5664 13736 3.126000 CGATGGAAGAGGAAGAAAACAGC 59.874 47.826 0.00 0.00 0.00 4.40
5716 13803 0.106819 AGATGAGGCATTGACCTGGC 60.107 55.000 4.63 0.00 41.32 4.85
5723 13810 1.340017 GGCATTGACCTGGCTAGTTCA 60.340 52.381 0.00 0.00 38.58 3.18
5746 13833 1.081892 CGGACTCTTGCACATTCCAG 58.918 55.000 0.00 0.00 0.00 3.86
5758 13845 3.791122 GCACATTCCAGCAAATCTCATCG 60.791 47.826 0.00 0.00 0.00 3.84
5794 13881 6.506538 AGATGACTATTGATAAGTGCCCTT 57.493 37.500 0.00 0.00 34.56 3.95
5906 14005 3.148340 ACGAAAGTAATGACCGGGC 57.852 52.632 6.32 1.57 46.88 6.13
5919 14018 2.112815 CCGGGCGAATGGAAGTTCC 61.113 63.158 15.50 15.50 36.96 3.62
5932 14031 4.011023 TGGAAGTTCCTTTGTGTTCGAAA 58.989 39.130 22.41 0.00 37.46 3.46
5977 14076 1.764054 AGAAGATGGCTCCTCCCGG 60.764 63.158 0.00 0.00 0.00 5.73
5986 14085 1.686325 GCTCCTCCCGGCATCACTTA 61.686 60.000 0.00 0.00 0.00 2.24
5988 14087 1.209504 CTCCTCCCGGCATCACTTAAA 59.790 52.381 0.00 0.00 0.00 1.52
5989 14088 1.631388 TCCTCCCGGCATCACTTAAAA 59.369 47.619 0.00 0.00 0.00 1.52
6012 14111 3.706140 GACATCGGGTCATGTCGC 58.294 61.111 0.00 0.00 46.19 5.19
6013 14112 1.153647 GACATCGGGTCATGTCGCA 60.154 57.895 7.69 0.00 46.19 5.10
6066 14196 7.337942 AGAGATATCACCAGCCTTAAAAAGTTG 59.662 37.037 5.32 0.00 0.00 3.16
6072 14203 4.099419 ACCAGCCTTAAAAAGTTGAAGGTG 59.901 41.667 6.09 3.89 41.60 4.00
6083 14214 0.953471 TTGAAGGTGCGTTCCATCCG 60.953 55.000 2.74 0.00 0.00 4.18
6179 14310 1.267121 GTCACTGAACTAGAGGGCCA 58.733 55.000 6.18 0.00 0.00 5.36
6180 14311 1.834263 GTCACTGAACTAGAGGGCCAT 59.166 52.381 6.18 0.00 0.00 4.40
6183 14314 2.114616 ACTGAACTAGAGGGCCATCAG 58.885 52.381 21.34 16.49 40.01 2.90
6184 14315 2.292521 ACTGAACTAGAGGGCCATCAGA 60.293 50.000 21.34 5.98 38.10 3.27
6185 14316 2.102252 CTGAACTAGAGGGCCATCAGAC 59.898 54.545 21.34 13.56 37.14 3.51
6207 14338 4.069232 CTTGGCTGCCTCGGTCGA 62.069 66.667 21.03 0.00 0.00 4.20
6208 14339 3.589654 CTTGGCTGCCTCGGTCGAA 62.590 63.158 21.03 2.59 0.00 3.71
6263 14406 0.881118 TTGGAGAGCATTTCAACGCC 59.119 50.000 0.00 0.00 0.00 5.68
6347 14521 0.038744 CACCTCACCTCCCTGCAAAT 59.961 55.000 0.00 0.00 0.00 2.32
6362 14536 5.337491 CCCTGCAAATGCCTACAACTTTATT 60.337 40.000 2.46 0.00 41.18 1.40
6444 14621 1.664659 CCTGCAAGAGCTCGAATTCAG 59.335 52.381 8.37 11.81 42.74 3.02
6595 14772 5.713389 AGAACTGGAAATCAATGATTGCAGA 59.287 36.000 22.61 8.52 32.14 4.26
6679 14856 6.942532 TTATGTCCTCCAATTGATTACTGC 57.057 37.500 7.12 0.00 0.00 4.40
6685 14862 1.334869 CCAATTGATTACTGCCCGCTC 59.665 52.381 7.12 0.00 0.00 5.03
6715 14898 8.574196 AAGCACATGTTTCTACACATAAAAAC 57.426 30.769 0.00 0.00 35.51 2.43
6716 14899 7.711846 AGCACATGTTTCTACACATAAAAACA 58.288 30.769 0.00 2.42 43.44 2.83
6755 14941 2.113860 TTGAGGAAATCTTCTGCGGG 57.886 50.000 0.00 0.00 0.00 6.13
6756 14942 0.392998 TGAGGAAATCTTCTGCGGGC 60.393 55.000 0.00 0.00 0.00 6.13
6757 14943 0.392998 GAGGAAATCTTCTGCGGGCA 60.393 55.000 0.00 0.00 0.00 5.36
6758 14944 0.257039 AGGAAATCTTCTGCGGGCAT 59.743 50.000 0.00 0.00 0.00 4.40
6759 14945 1.106285 GGAAATCTTCTGCGGGCATT 58.894 50.000 0.00 0.00 0.00 3.56
6761 14947 1.745087 GAAATCTTCTGCGGGCATTCA 59.255 47.619 0.00 0.00 0.00 2.57
6762 14948 1.838112 AATCTTCTGCGGGCATTCAA 58.162 45.000 0.00 0.00 0.00 2.69
6763 14949 2.062971 ATCTTCTGCGGGCATTCAAT 57.937 45.000 0.00 0.00 0.00 2.57
6764 14950 1.838112 TCTTCTGCGGGCATTCAATT 58.162 45.000 0.00 0.00 0.00 2.32
6766 14952 2.945008 TCTTCTGCGGGCATTCAATTAG 59.055 45.455 0.00 0.00 0.00 1.73
6768 14954 0.670162 CTGCGGGCATTCAATTAGGG 59.330 55.000 0.00 0.00 0.00 3.53
6769 14955 1.363807 GCGGGCATTCAATTAGGGC 59.636 57.895 0.00 0.00 0.00 5.19
6770 14956 1.109323 GCGGGCATTCAATTAGGGCT 61.109 55.000 0.00 0.00 0.00 5.19
6771 14957 0.954452 CGGGCATTCAATTAGGGCTC 59.046 55.000 0.00 0.00 0.00 4.70
6773 14959 1.133356 GGGCATTCAATTAGGGCTCCT 60.133 52.381 0.00 0.00 37.71 3.69
6775 14961 3.033909 GGCATTCAATTAGGGCTCCTTT 58.966 45.455 0.00 0.00 34.61 3.11
6776 14962 3.181472 GGCATTCAATTAGGGCTCCTTTG 60.181 47.826 0.00 0.22 34.61 2.77
6777 14963 3.701040 GCATTCAATTAGGGCTCCTTTGA 59.299 43.478 0.00 2.43 34.61 2.69
6778 14964 4.343239 GCATTCAATTAGGGCTCCTTTGAT 59.657 41.667 8.36 0.00 32.53 2.57
6782 14968 5.579047 TCAATTAGGGCTCCTTTGATTCAA 58.421 37.500 0.00 0.00 34.61 2.69
6783 14969 5.653769 TCAATTAGGGCTCCTTTGATTCAAG 59.346 40.000 0.00 0.00 34.61 3.02
6784 14970 2.521547 AGGGCTCCTTTGATTCAAGG 57.478 50.000 1.69 1.69 0.00 3.61
6786 14972 2.379907 AGGGCTCCTTTGATTCAAGGAA 59.620 45.455 9.88 0.00 0.00 3.36
6787 14973 3.012161 AGGGCTCCTTTGATTCAAGGAAT 59.988 43.478 9.88 0.00 34.71 3.01
6789 14975 4.223700 GGGCTCCTTTGATTCAAGGAATTT 59.776 41.667 9.88 0.00 31.89 1.82
6790 14976 5.280164 GGGCTCCTTTGATTCAAGGAATTTT 60.280 40.000 9.88 0.00 31.89 1.82
6792 14978 7.365028 GGGCTCCTTTGATTCAAGGAATTTTAT 60.365 37.037 9.88 0.00 31.89 1.40
6793 14979 8.695456 GGCTCCTTTGATTCAAGGAATTTTATA 58.305 33.333 9.88 0.00 31.89 0.98
6796 14982 9.989296 TCCTTTGATTCAAGGAATTTTATAGGA 57.011 29.630 9.88 7.40 31.89 2.94
6808 14994 9.958125 AGGAATTTTATAGGATTTTTGGAGGAT 57.042 29.630 0.00 0.00 0.00 3.24
6848 15034 7.610580 TTTTTCCTATGTTGGTCCTTTGATT 57.389 32.000 0.00 0.00 0.00 2.57
6849 15035 6.834168 TTTCCTATGTTGGTCCTTTGATTC 57.166 37.500 0.00 0.00 0.00 2.52
6850 15036 5.512942 TCCTATGTTGGTCCTTTGATTCA 57.487 39.130 0.00 0.00 0.00 2.57
6851 15037 6.078456 TCCTATGTTGGTCCTTTGATTCAT 57.922 37.500 0.00 0.00 0.00 2.57
6852 15038 7.206789 TCCTATGTTGGTCCTTTGATTCATA 57.793 36.000 0.00 0.00 0.00 2.15
6853 15039 7.282585 TCCTATGTTGGTCCTTTGATTCATAG 58.717 38.462 0.00 0.00 35.63 2.23
6854 15040 6.488006 CCTATGTTGGTCCTTTGATTCATAGG 59.512 42.308 14.95 14.95 43.47 2.57
6855 15041 5.512942 TGTTGGTCCTTTGATTCATAGGA 57.487 39.130 18.57 18.57 38.81 2.94
6856 15042 6.078456 TGTTGGTCCTTTGATTCATAGGAT 57.922 37.500 23.34 0.00 41.93 3.24
6857 15043 6.493166 TGTTGGTCCTTTGATTCATAGGATT 58.507 36.000 23.34 0.00 41.93 3.01
6858 15044 6.377996 TGTTGGTCCTTTGATTCATAGGATTG 59.622 38.462 23.34 1.66 41.93 2.67
6859 15045 6.325993 TGGTCCTTTGATTCATAGGATTGA 57.674 37.500 23.34 11.38 41.93 2.57
6860 15046 6.730447 TGGTCCTTTGATTCATAGGATTGAA 58.270 36.000 23.34 10.72 41.93 2.69
6861 15047 7.356680 TGGTCCTTTGATTCATAGGATTGAAT 58.643 34.615 23.34 0.00 46.39 2.57
6925 15111 8.964476 TTTCATAGGAAATCTAACATCCACTC 57.036 34.615 0.00 0.00 38.07 3.51
6926 15112 7.067496 TCATAGGAAATCTAACATCCACTCC 57.933 40.000 0.00 0.00 35.62 3.85
6927 15113 6.615316 TCATAGGAAATCTAACATCCACTCCA 59.385 38.462 0.00 0.00 35.62 3.86
6928 15114 5.779241 AGGAAATCTAACATCCACTCCAA 57.221 39.130 0.00 0.00 35.62 3.53
6929 15115 5.501156 AGGAAATCTAACATCCACTCCAAC 58.499 41.667 0.00 0.00 35.62 3.77
6930 15116 4.640647 GGAAATCTAACATCCACTCCAACC 59.359 45.833 0.00 0.00 33.30 3.77
6931 15117 5.501156 GAAATCTAACATCCACTCCAACCT 58.499 41.667 0.00 0.00 0.00 3.50
6932 15118 4.762289 ATCTAACATCCACTCCAACCTC 57.238 45.455 0.00 0.00 0.00 3.85
6933 15119 3.791320 TCTAACATCCACTCCAACCTCT 58.209 45.455 0.00 0.00 0.00 3.69
6934 15120 4.168101 TCTAACATCCACTCCAACCTCTT 58.832 43.478 0.00 0.00 0.00 2.85
6935 15121 3.884037 AACATCCACTCCAACCTCTTT 57.116 42.857 0.00 0.00 0.00 2.52
6936 15122 3.884037 ACATCCACTCCAACCTCTTTT 57.116 42.857 0.00 0.00 0.00 2.27
6937 15123 4.184649 ACATCCACTCCAACCTCTTTTT 57.815 40.909 0.00 0.00 0.00 1.94
6938 15124 5.319043 ACATCCACTCCAACCTCTTTTTA 57.681 39.130 0.00 0.00 0.00 1.52
6939 15125 5.070685 ACATCCACTCCAACCTCTTTTTAC 58.929 41.667 0.00 0.00 0.00 2.01
6940 15126 4.781775 TCCACTCCAACCTCTTTTTACA 57.218 40.909 0.00 0.00 0.00 2.41
6941 15127 5.118729 TCCACTCCAACCTCTTTTTACAA 57.881 39.130 0.00 0.00 0.00 2.41
6942 15128 5.701224 TCCACTCCAACCTCTTTTTACAAT 58.299 37.500 0.00 0.00 0.00 2.71
6943 15129 6.133356 TCCACTCCAACCTCTTTTTACAATT 58.867 36.000 0.00 0.00 0.00 2.32
6944 15130 6.264518 TCCACTCCAACCTCTTTTTACAATTC 59.735 38.462 0.00 0.00 0.00 2.17
6945 15131 6.447162 CACTCCAACCTCTTTTTACAATTCC 58.553 40.000 0.00 0.00 0.00 3.01
6946 15132 6.265422 CACTCCAACCTCTTTTTACAATTCCT 59.735 38.462 0.00 0.00 0.00 3.36
6947 15133 6.490381 ACTCCAACCTCTTTTTACAATTCCTC 59.510 38.462 0.00 0.00 0.00 3.71
6948 15134 6.610830 TCCAACCTCTTTTTACAATTCCTCT 58.389 36.000 0.00 0.00 0.00 3.69
6949 15135 6.490040 TCCAACCTCTTTTTACAATTCCTCTG 59.510 38.462 0.00 0.00 0.00 3.35
6950 15136 6.265422 CCAACCTCTTTTTACAATTCCTCTGT 59.735 38.462 0.00 0.00 0.00 3.41
6951 15137 7.201911 CCAACCTCTTTTTACAATTCCTCTGTT 60.202 37.037 0.00 0.00 0.00 3.16
6952 15138 7.898014 ACCTCTTTTTACAATTCCTCTGTTT 57.102 32.000 0.00 0.00 0.00 2.83
6953 15139 8.306313 ACCTCTTTTTACAATTCCTCTGTTTT 57.694 30.769 0.00 0.00 0.00 2.43
6954 15140 8.758829 ACCTCTTTTTACAATTCCTCTGTTTTT 58.241 29.630 0.00 0.00 0.00 1.94
6955 15141 9.249457 CCTCTTTTTACAATTCCTCTGTTTTTC 57.751 33.333 0.00 0.00 0.00 2.29
6956 15142 9.249457 CTCTTTTTACAATTCCTCTGTTTTTCC 57.751 33.333 0.00 0.00 0.00 3.13
6957 15143 8.201464 TCTTTTTACAATTCCTCTGTTTTTCCC 58.799 33.333 0.00 0.00 0.00 3.97
6958 15144 5.699097 TTACAATTCCTCTGTTTTTCCCG 57.301 39.130 0.00 0.00 0.00 5.14
6959 15145 3.562182 ACAATTCCTCTGTTTTTCCCGT 58.438 40.909 0.00 0.00 0.00 5.28
6960 15146 3.317993 ACAATTCCTCTGTTTTTCCCGTG 59.682 43.478 0.00 0.00 0.00 4.94
6961 15147 1.314730 TTCCTCTGTTTTTCCCGTGC 58.685 50.000 0.00 0.00 0.00 5.34
6962 15148 0.536460 TCCTCTGTTTTTCCCGTGCC 60.536 55.000 0.00 0.00 0.00 5.01
6963 15149 0.821711 CCTCTGTTTTTCCCGTGCCA 60.822 55.000 0.00 0.00 0.00 4.92
6964 15150 1.247567 CTCTGTTTTTCCCGTGCCAT 58.752 50.000 0.00 0.00 0.00 4.40
6965 15151 1.200020 CTCTGTTTTTCCCGTGCCATC 59.800 52.381 0.00 0.00 0.00 3.51
6966 15152 0.958091 CTGTTTTTCCCGTGCCATCA 59.042 50.000 0.00 0.00 0.00 3.07
6967 15153 1.339610 CTGTTTTTCCCGTGCCATCAA 59.660 47.619 0.00 0.00 0.00 2.57
6968 15154 1.757118 TGTTTTTCCCGTGCCATCAAA 59.243 42.857 0.00 0.00 0.00 2.69
6969 15155 2.131972 GTTTTTCCCGTGCCATCAAAC 58.868 47.619 0.00 0.00 0.00 2.93
6970 15156 1.403814 TTTTCCCGTGCCATCAAACA 58.596 45.000 0.00 0.00 0.00 2.83
6971 15157 0.671251 TTTCCCGTGCCATCAAACAC 59.329 50.000 0.00 0.00 0.00 3.32
6972 15158 0.179004 TTCCCGTGCCATCAAACACT 60.179 50.000 0.00 0.00 34.58 3.55
6973 15159 0.605319 TCCCGTGCCATCAAACACTC 60.605 55.000 0.00 0.00 34.58 3.51
6974 15160 0.888736 CCCGTGCCATCAAACACTCA 60.889 55.000 0.00 0.00 34.58 3.41
6975 15161 1.167851 CCGTGCCATCAAACACTCAT 58.832 50.000 0.00 0.00 34.58 2.90
6976 15162 1.541147 CCGTGCCATCAAACACTCATT 59.459 47.619 0.00 0.00 34.58 2.57
6977 15163 2.587956 CGTGCCATCAAACACTCATTG 58.412 47.619 0.00 0.00 34.58 2.82
6978 15164 2.331194 GTGCCATCAAACACTCATTGC 58.669 47.619 0.00 0.00 33.92 3.56
6979 15165 2.029649 GTGCCATCAAACACTCATTGCT 60.030 45.455 0.00 0.00 33.92 3.91
6980 15166 3.191162 GTGCCATCAAACACTCATTGCTA 59.809 43.478 0.00 0.00 33.92 3.49
6981 15167 3.825585 TGCCATCAAACACTCATTGCTAA 59.174 39.130 0.00 0.00 0.00 3.09
6982 15168 4.463539 TGCCATCAAACACTCATTGCTAAT 59.536 37.500 0.00 0.00 0.00 1.73
6983 15169 5.047164 TGCCATCAAACACTCATTGCTAATT 60.047 36.000 0.00 0.00 0.00 1.40
6984 15170 5.517770 GCCATCAAACACTCATTGCTAATTC 59.482 40.000 0.00 0.00 0.00 2.17
6985 15171 6.626623 GCCATCAAACACTCATTGCTAATTCT 60.627 38.462 0.00 0.00 0.00 2.40
6986 15172 7.415541 GCCATCAAACACTCATTGCTAATTCTA 60.416 37.037 0.00 0.00 0.00 2.10
6987 15173 8.627403 CCATCAAACACTCATTGCTAATTCTAT 58.373 33.333 0.00 0.00 0.00 1.98
6990 15176 9.330063 TCAAACACTCATTGCTAATTCTATAGG 57.670 33.333 0.00 0.00 0.00 2.57
6991 15177 9.330063 CAAACACTCATTGCTAATTCTATAGGA 57.670 33.333 0.00 0.00 0.00 2.94
6994 15180 9.717942 ACACTCATTGCTAATTCTATAGGATTC 57.282 33.333 9.67 0.00 0.00 2.52
6995 15181 9.716531 CACTCATTGCTAATTCTATAGGATTCA 57.283 33.333 9.67 0.57 0.00 2.57
7001 15187 9.770097 TTGCTAATTCTATAGGATTCAAGTGAG 57.230 33.333 9.67 2.51 0.00 3.51
7002 15188 7.875041 TGCTAATTCTATAGGATTCAAGTGAGC 59.125 37.037 9.67 12.10 0.00 4.26
7003 15189 7.875041 GCTAATTCTATAGGATTCAAGTGAGCA 59.125 37.037 9.67 0.00 0.00 4.26
7004 15190 9.941325 CTAATTCTATAGGATTCAAGTGAGCAT 57.059 33.333 9.67 0.00 0.00 3.79
7005 15191 8.618702 AATTCTATAGGATTCAAGTGAGCATG 57.381 34.615 0.00 0.00 0.00 4.06
7006 15192 5.545588 TCTATAGGATTCAAGTGAGCATGC 58.454 41.667 10.51 10.51 0.00 4.06
7007 15193 1.760192 AGGATTCAAGTGAGCATGCC 58.240 50.000 15.66 6.65 0.00 4.40
7008 15194 1.005097 AGGATTCAAGTGAGCATGCCA 59.995 47.619 15.66 9.53 0.00 4.92
7009 15195 1.133790 GGATTCAAGTGAGCATGCCAC 59.866 52.381 23.70 23.70 34.89 5.01
7010 15196 2.089980 GATTCAAGTGAGCATGCCACT 58.910 47.619 26.48 26.48 45.88 4.00
7011 15197 1.527034 TTCAAGTGAGCATGCCACTC 58.473 50.000 29.80 17.38 43.42 3.51
7012 15198 0.321919 TCAAGTGAGCATGCCACTCC 60.322 55.000 29.80 14.63 43.42 3.85
7013 15199 0.607217 CAAGTGAGCATGCCACTCCA 60.607 55.000 29.80 13.81 43.42 3.86
7014 15200 0.111061 AAGTGAGCATGCCACTCCAA 59.889 50.000 29.80 2.63 43.42 3.53
7015 15201 0.607489 AGTGAGCATGCCACTCCAAC 60.607 55.000 26.48 10.54 40.55 3.77
7016 15202 1.303561 TGAGCATGCCACTCCAACC 60.304 57.895 15.66 0.00 32.98 3.77
7017 15203 2.036256 AGCATGCCACTCCAACCC 59.964 61.111 15.66 0.00 0.00 4.11
7018 15204 2.036256 GCATGCCACTCCAACCCT 59.964 61.111 6.36 0.00 0.00 4.34
7019 15205 1.207488 AGCATGCCACTCCAACCCTA 61.207 55.000 15.66 0.00 0.00 3.53
7020 15206 0.106519 GCATGCCACTCCAACCCTAT 60.107 55.000 6.36 0.00 0.00 2.57
7021 15207 1.142870 GCATGCCACTCCAACCCTATA 59.857 52.381 6.36 0.00 0.00 1.31
7022 15208 2.851195 CATGCCACTCCAACCCTATAC 58.149 52.381 0.00 0.00 0.00 1.47
7023 15209 2.263895 TGCCACTCCAACCCTATACT 57.736 50.000 0.00 0.00 0.00 2.12
7024 15210 2.557869 TGCCACTCCAACCCTATACTT 58.442 47.619 0.00 0.00 0.00 2.24
7025 15211 2.916934 TGCCACTCCAACCCTATACTTT 59.083 45.455 0.00 0.00 0.00 2.66
7026 15212 3.332485 TGCCACTCCAACCCTATACTTTT 59.668 43.478 0.00 0.00 0.00 2.27
7027 15213 3.945921 GCCACTCCAACCCTATACTTTTC 59.054 47.826 0.00 0.00 0.00 2.29
7028 15214 4.524053 CCACTCCAACCCTATACTTTTCC 58.476 47.826 0.00 0.00 0.00 3.13
7029 15215 4.227527 CCACTCCAACCCTATACTTTTCCT 59.772 45.833 0.00 0.00 0.00 3.36
7030 15216 5.427481 CCACTCCAACCCTATACTTTTCCTA 59.573 44.000 0.00 0.00 0.00 2.94
7031 15217 6.101296 CCACTCCAACCCTATACTTTTCCTAT 59.899 42.308 0.00 0.00 0.00 2.57
7032 15218 7.366551 CCACTCCAACCCTATACTTTTCCTATT 60.367 40.741 0.00 0.00 0.00 1.73
7033 15219 7.715686 CACTCCAACCCTATACTTTTCCTATTC 59.284 40.741 0.00 0.00 0.00 1.75
7034 15220 7.145474 TCCAACCCTATACTTTTCCTATTCC 57.855 40.000 0.00 0.00 0.00 3.01
7035 15221 6.912561 TCCAACCCTATACTTTTCCTATTCCT 59.087 38.462 0.00 0.00 0.00 3.36
7036 15222 8.075621 TCCAACCCTATACTTTTCCTATTCCTA 58.924 37.037 0.00 0.00 0.00 2.94
7037 15223 8.155510 CCAACCCTATACTTTTCCTATTCCTAC 58.844 40.741 0.00 0.00 0.00 3.18
7038 15224 7.536159 ACCCTATACTTTTCCTATTCCTACG 57.464 40.000 0.00 0.00 0.00 3.51
7039 15225 7.071917 ACCCTATACTTTTCCTATTCCTACGT 58.928 38.462 0.00 0.00 0.00 3.57
7040 15226 7.566509 ACCCTATACTTTTCCTATTCCTACGTT 59.433 37.037 0.00 0.00 0.00 3.99
7041 15227 8.427276 CCCTATACTTTTCCTATTCCTACGTTT 58.573 37.037 0.00 0.00 0.00 3.60
7042 15228 9.828039 CCTATACTTTTCCTATTCCTACGTTTT 57.172 33.333 0.00 0.00 0.00 2.43
7051 15237 9.743581 TTCCTATTCCTACGTTTTTAAAATCCT 57.256 29.630 0.55 0.00 0.00 3.24
7055 15241 8.776376 ATTCCTACGTTTTTAAAATCCTACGA 57.224 30.769 22.81 10.39 33.60 3.43
7056 15242 8.600449 TTCCTACGTTTTTAAAATCCTACGAA 57.400 30.769 22.81 9.16 33.60 3.85
7057 15243 8.776376 TCCTACGTTTTTAAAATCCTACGAAT 57.224 30.769 22.81 9.40 33.60 3.34
7058 15244 8.872845 TCCTACGTTTTTAAAATCCTACGAATC 58.127 33.333 22.81 0.00 33.60 2.52
7059 15245 8.658609 CCTACGTTTTTAAAATCCTACGAATCA 58.341 33.333 22.81 9.09 33.60 2.57
7062 15248 9.389570 ACGTTTTTAAAATCCTACGAATCAAAG 57.610 29.630 22.81 2.15 33.60 2.77
7063 15249 9.601971 CGTTTTTAAAATCCTACGAATCAAAGA 57.398 29.630 14.69 0.00 0.00 2.52
7066 15252 5.819825 AAAATCCTACGAATCAAAGAGGC 57.180 39.130 0.00 0.00 0.00 4.70
7067 15253 2.981859 TCCTACGAATCAAAGAGGCC 57.018 50.000 0.00 0.00 0.00 5.19
7068 15254 1.485066 TCCTACGAATCAAAGAGGCCC 59.515 52.381 0.00 0.00 0.00 5.80
7090 15276 5.233988 CCTTAGGCTGCTCAACATATACTC 58.766 45.833 0.00 0.00 0.00 2.59
7091 15277 3.760580 AGGCTGCTCAACATATACTCC 57.239 47.619 0.00 0.00 0.00 3.85
7092 15278 3.041211 AGGCTGCTCAACATATACTCCA 58.959 45.455 0.00 0.00 0.00 3.86
7093 15279 3.134458 GGCTGCTCAACATATACTCCAC 58.866 50.000 0.00 0.00 0.00 4.02
7094 15280 3.181461 GGCTGCTCAACATATACTCCACT 60.181 47.826 0.00 0.00 0.00 4.00
7210 15555 5.065346 TGCAGAGAGAACTACACGAGATAAG 59.935 44.000 0.00 0.00 0.00 1.73
7230 15575 5.473066 AAGCCTGCAGATGTTTTATGTTT 57.527 34.783 17.39 0.00 0.00 2.83
7231 15576 4.813027 AGCCTGCAGATGTTTTATGTTTG 58.187 39.130 17.39 0.00 0.00 2.93
7238 15583 7.038048 TGCAGATGTTTTATGTTTGTTGTTGA 58.962 30.769 0.00 0.00 0.00 3.18
7239 15584 7.222417 TGCAGATGTTTTATGTTTGTTGTTGAG 59.778 33.333 0.00 0.00 0.00 3.02
7240 15585 7.434897 GCAGATGTTTTATGTTTGTTGTTGAGA 59.565 33.333 0.00 0.00 0.00 3.27
7269 15614 1.470890 TCCGAAATTTCCGCCATTCAC 59.529 47.619 12.54 0.00 0.00 3.18
7303 15648 2.979813 GCTACAACAATGCACCTTTTCG 59.020 45.455 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.002982 ACGCACATACACACATTCAAGAT 58.997 39.130 0.00 0.00 0.00 2.40
1 2 3.186205 CACGCACATACACACATTCAAGA 59.814 43.478 0.00 0.00 0.00 3.02
2 3 3.058983 ACACGCACATACACACATTCAAG 60.059 43.478 0.00 0.00 0.00 3.02
3 4 2.875317 ACACGCACATACACACATTCAA 59.125 40.909 0.00 0.00 0.00 2.69
4 5 2.222911 CACACGCACATACACACATTCA 59.777 45.455 0.00 0.00 0.00 2.57
5 6 2.223144 ACACACGCACATACACACATTC 59.777 45.455 0.00 0.00 0.00 2.67
6 7 2.217750 ACACACGCACATACACACATT 58.782 42.857 0.00 0.00 0.00 2.71
7 8 1.877637 ACACACGCACATACACACAT 58.122 45.000 0.00 0.00 0.00 3.21
8 9 1.328986 CAACACACGCACATACACACA 59.671 47.619 0.00 0.00 0.00 3.72
9 10 1.329292 ACAACACACGCACATACACAC 59.671 47.619 0.00 0.00 0.00 3.82
10 11 1.328986 CACAACACACGCACATACACA 59.671 47.619 0.00 0.00 0.00 3.72
11 12 1.333702 CCACAACACACGCACATACAC 60.334 52.381 0.00 0.00 0.00 2.90
12 13 0.940833 CCACAACACACGCACATACA 59.059 50.000 0.00 0.00 0.00 2.29
13 14 0.385473 GCCACAACACACGCACATAC 60.385 55.000 0.00 0.00 0.00 2.39
14 15 1.511318 GGCCACAACACACGCACATA 61.511 55.000 0.00 0.00 0.00 2.29
15 16 2.721231 GCCACAACACACGCACAT 59.279 55.556 0.00 0.00 0.00 3.21
16 17 3.513438 GGCCACAACACACGCACA 61.513 61.111 0.00 0.00 0.00 4.57
17 18 3.209097 AGGCCACAACACACGCAC 61.209 61.111 5.01 0.00 0.00 5.34
18 19 3.208383 CAGGCCACAACACACGCA 61.208 61.111 5.01 0.00 0.00 5.24
19 20 3.964875 CCAGGCCACAACACACGC 61.965 66.667 5.01 0.00 0.00 5.34
20 21 2.668185 TACCCAGGCCACAACACACG 62.668 60.000 5.01 0.00 0.00 4.49
21 22 0.251165 ATACCCAGGCCACAACACAC 60.251 55.000 5.01 0.00 0.00 3.82
22 23 0.251121 CATACCCAGGCCACAACACA 60.251 55.000 5.01 0.00 0.00 3.72
23 24 0.037590 TCATACCCAGGCCACAACAC 59.962 55.000 5.01 0.00 0.00 3.32
24 25 0.327924 CTCATACCCAGGCCACAACA 59.672 55.000 5.01 0.00 0.00 3.33
25 26 0.394352 CCTCATACCCAGGCCACAAC 60.394 60.000 5.01 0.00 0.00 3.32
26 27 1.570857 CCCTCATACCCAGGCCACAA 61.571 60.000 5.01 0.00 0.00 3.33
27 28 2.000701 CCCTCATACCCAGGCCACA 61.001 63.158 5.01 0.00 0.00 4.17
28 29 1.062488 ATCCCTCATACCCAGGCCAC 61.062 60.000 5.01 0.00 0.00 5.01
29 30 0.768221 GATCCCTCATACCCAGGCCA 60.768 60.000 5.01 0.00 0.00 5.36
30 31 1.831652 CGATCCCTCATACCCAGGCC 61.832 65.000 0.00 0.00 0.00 5.19
31 32 1.122019 ACGATCCCTCATACCCAGGC 61.122 60.000 0.00 0.00 0.00 4.85
32 33 1.070758 CAACGATCCCTCATACCCAGG 59.929 57.143 0.00 0.00 0.00 4.45
33 34 1.070758 CCAACGATCCCTCATACCCAG 59.929 57.143 0.00 0.00 0.00 4.45
34 35 1.128200 CCAACGATCCCTCATACCCA 58.872 55.000 0.00 0.00 0.00 4.51
35 36 0.396811 CCCAACGATCCCTCATACCC 59.603 60.000 0.00 0.00 0.00 3.69
36 37 1.129058 ACCCAACGATCCCTCATACC 58.871 55.000 0.00 0.00 0.00 2.73
37 38 2.093128 ACAACCCAACGATCCCTCATAC 60.093 50.000 0.00 0.00 0.00 2.39
38 39 2.193127 ACAACCCAACGATCCCTCATA 58.807 47.619 0.00 0.00 0.00 2.15
39 40 0.991920 ACAACCCAACGATCCCTCAT 59.008 50.000 0.00 0.00 0.00 2.90
40 41 0.768622 AACAACCCAACGATCCCTCA 59.231 50.000 0.00 0.00 0.00 3.86
41 42 1.450025 GAACAACCCAACGATCCCTC 58.550 55.000 0.00 0.00 0.00 4.30
42 43 0.321298 CGAACAACCCAACGATCCCT 60.321 55.000 0.00 0.00 0.00 4.20
43 44 0.320946 TCGAACAACCCAACGATCCC 60.321 55.000 0.00 0.00 0.00 3.85
44 45 1.076332 CTCGAACAACCCAACGATCC 58.924 55.000 0.00 0.00 34.41 3.36
45 46 0.442699 GCTCGAACAACCCAACGATC 59.557 55.000 0.00 0.00 34.41 3.69
46 47 0.250124 TGCTCGAACAACCCAACGAT 60.250 50.000 0.00 0.00 34.41 3.73
47 48 0.250124 ATGCTCGAACAACCCAACGA 60.250 50.000 0.00 0.00 0.00 3.85
48 49 0.110238 CATGCTCGAACAACCCAACG 60.110 55.000 0.00 0.00 0.00 4.10
49 50 1.197721 CTCATGCTCGAACAACCCAAC 59.802 52.381 0.00 0.00 0.00 3.77
50 51 1.202758 ACTCATGCTCGAACAACCCAA 60.203 47.619 0.00 0.00 0.00 4.12
51 52 0.396435 ACTCATGCTCGAACAACCCA 59.604 50.000 0.00 0.00 0.00 4.51
52 53 0.798776 CACTCATGCTCGAACAACCC 59.201 55.000 0.00 0.00 0.00 4.11
53 54 1.512926 ACACTCATGCTCGAACAACC 58.487 50.000 0.00 0.00 0.00 3.77
54 55 3.609103 AAACACTCATGCTCGAACAAC 57.391 42.857 0.00 0.00 0.00 3.32
55 56 4.630894 AAAAACACTCATGCTCGAACAA 57.369 36.364 0.00 0.00 0.00 2.83
76 77 4.038042 TCCTTTCACACACACACACAAAAA 59.962 37.500 0.00 0.00 0.00 1.94
77 78 3.570125 TCCTTTCACACACACACACAAAA 59.430 39.130 0.00 0.00 0.00 2.44
78 79 3.149981 TCCTTTCACACACACACACAAA 58.850 40.909 0.00 0.00 0.00 2.83
79 80 2.746904 CTCCTTTCACACACACACACAA 59.253 45.455 0.00 0.00 0.00 3.33
122 123 1.392589 CCACAGCACAACCTGAAAGT 58.607 50.000 0.00 0.00 36.67 2.66
125 126 1.077140 TGCCACAGCACAACCTGAA 60.077 52.632 0.00 0.00 46.52 3.02
139 250 7.465353 TTCAATTCAAGTAGATCAAATGCCA 57.535 32.000 0.00 0.00 0.00 4.92
180 291 7.959689 AACATGCTTGTGTATGCAAAATAAA 57.040 28.000 5.94 0.00 39.93 1.40
211 322 7.862372 CAGCAGTTTACAAGCTATTCTCAAAAA 59.138 33.333 0.00 0.00 36.73 1.94
239 360 2.124529 GCAGGAAGCTAGCCCACC 60.125 66.667 12.13 12.42 41.15 4.61
251 372 1.529010 CAAGGCAACCACAGCAGGA 60.529 57.895 0.00 0.00 37.17 3.86
291 412 5.957842 TTTGACACTTTAGTTAGCCCATG 57.042 39.130 0.00 0.00 0.00 3.66
302 423 9.921637 CCCATATTTAAGCTTTTTGACACTTTA 57.078 29.630 3.20 0.00 0.00 1.85
387 508 3.992427 GTGGGAAGTAACGTCGAGAATTT 59.008 43.478 0.00 0.00 0.00 1.82
391 512 0.883833 GGTGGGAAGTAACGTCGAGA 59.116 55.000 0.00 0.00 0.00 4.04
413 534 5.412594 TGATTTTTCTCCATCGACCAAGAAG 59.587 40.000 0.00 0.00 0.00 2.85
441 562 3.802685 GCATTTACTCCATGGACGAGTAC 59.197 47.826 11.44 0.00 41.41 2.73
442 563 3.181469 GGCATTTACTCCATGGACGAGTA 60.181 47.826 11.44 9.34 40.93 2.59
443 564 2.420129 GGCATTTACTCCATGGACGAGT 60.420 50.000 11.44 10.46 43.05 4.18
444 565 2.213499 GGCATTTACTCCATGGACGAG 58.787 52.381 11.44 3.84 0.00 4.18
465 586 0.107214 ACACCAGACACAACCCACAG 60.107 55.000 0.00 0.00 0.00 3.66
473 594 1.048601 GGAGAGGAACACCAGACACA 58.951 55.000 0.00 0.00 0.00 3.72
563 700 0.321387 CATCATCAGATCCGGCAGGG 60.321 60.000 2.05 0.00 38.33 4.45
652 789 2.309755 AGGCTTCCATCTTGTCCATCAA 59.690 45.455 0.00 0.00 34.61 2.57
805 942 3.129638 GTCGTAGAGAAGCTCCTTGACAT 59.870 47.826 0.00 0.00 36.95 3.06
848 985 1.310904 GGAGCCTGTAGTAGTCGAGG 58.689 60.000 0.00 0.00 0.00 4.63
879 1085 2.290896 TGGGATTGTGCTTACCTCCTTG 60.291 50.000 0.00 0.00 0.00 3.61
987 1349 2.808315 CGCATACCGTCAGGCTCT 59.192 61.111 0.00 0.00 42.76 4.09
1239 2659 0.329596 GATGGGCTCCAGGTGTCTTT 59.670 55.000 0.41 0.00 36.75 2.52
1316 3325 6.992123 TGGGTCAAGCAGATGTAATACTAATG 59.008 38.462 0.00 0.00 0.00 1.90
1375 4589 3.242870 GCTGCAATAAGAAACGGATGGAG 60.243 47.826 0.00 0.00 0.00 3.86
1403 4624 4.433615 ACCTCACATTACAAGTAGCATCG 58.566 43.478 0.00 0.00 0.00 3.84
1562 4789 5.339200 CCCTTGGATGTCCTGTAACTGTAAT 60.339 44.000 0.09 0.00 36.82 1.89
1592 4822 6.037610 GTCCATATGCCTCAAGAACTTTACTG 59.962 42.308 0.00 0.00 0.00 2.74
1608 4838 2.743636 TTAGCGCTAGGTCCATATGC 57.256 50.000 17.98 0.00 0.00 3.14
1627 4857 3.189287 GCGGTGATGACTTGAACTTGAAT 59.811 43.478 0.00 0.00 0.00 2.57
1832 5065 9.551734 TGACTTTTCATGTCTGGATCATTATAG 57.448 33.333 0.00 0.00 35.63 1.31
2095 5331 1.308998 ACCCTTTGCTTGACTTGACG 58.691 50.000 0.00 0.00 0.00 4.35
2311 5547 0.391263 AGTTACTGCTGCTAACGGGC 60.391 55.000 0.00 0.00 0.00 6.13
2709 7996 0.839277 TGCATGGGACCAGACATAGG 59.161 55.000 0.00 0.00 0.00 2.57
2748 8035 0.947244 GTTGCACACTCAGTCCTTGG 59.053 55.000 0.00 0.00 0.00 3.61
2883 8173 5.186996 TGTTTTCTGCAATTCACTCCTTC 57.813 39.130 0.00 0.00 0.00 3.46
2884 8174 5.563475 CGATGTTTTCTGCAATTCACTCCTT 60.563 40.000 0.00 0.00 0.00 3.36
3016 8306 5.723492 TCTGTCATAATCGTGCTCAAATG 57.277 39.130 0.00 0.00 0.00 2.32
4035 9785 5.009010 TGCATTTCTCAGGTTCTCTTCAAAC 59.991 40.000 0.00 0.00 0.00 2.93
4036 9786 5.132502 TGCATTTCTCAGGTTCTCTTCAAA 58.867 37.500 0.00 0.00 0.00 2.69
4037 9787 4.717877 TGCATTTCTCAGGTTCTCTTCAA 58.282 39.130 0.00 0.00 0.00 2.69
4038 9788 4.356405 TGCATTTCTCAGGTTCTCTTCA 57.644 40.909 0.00 0.00 0.00 3.02
4449 10250 6.223120 ACAAAACTGGACCTTAAAATCATGC 58.777 36.000 0.00 0.00 0.00 4.06
4464 10265 4.821805 TCAAAGCCTCTAGAACAAAACTGG 59.178 41.667 0.00 0.00 0.00 4.00
4640 10444 3.823873 AGAGCTAGTGTCATATTCCTCGG 59.176 47.826 0.00 0.00 0.00 4.63
4669 10473 2.865276 GCTCCTCGTTTTTGTCCGTAGT 60.865 50.000 0.00 0.00 0.00 2.73
4672 10476 0.106149 AGCTCCTCGTTTTTGTCCGT 59.894 50.000 0.00 0.00 0.00 4.69
4674 10478 2.070028 GAGAGCTCCTCGTTTTTGTCC 58.930 52.381 10.93 0.00 35.36 4.02
4718 10522 7.200434 ACTATATCCAAAGAAGGCTCAGAAA 57.800 36.000 0.00 0.00 0.00 2.52
4732 10536 6.046593 CCACGCTTGTTTCTACTATATCCAA 58.953 40.000 0.00 0.00 0.00 3.53
4737 10541 4.679662 GCTCCACGCTTGTTTCTACTATA 58.320 43.478 0.00 0.00 35.14 1.31
4740 10544 1.797025 GCTCCACGCTTGTTTCTACT 58.203 50.000 0.00 0.00 35.14 2.57
4772 10576 1.531149 CGTCAGTTTGGTCACCATCAC 59.469 52.381 0.00 0.00 31.53 3.06
4781 10585 0.759346 AGAAGGCTCGTCAGTTTGGT 59.241 50.000 0.00 0.00 0.00 3.67
4784 10588 2.832129 TCCATAGAAGGCTCGTCAGTTT 59.168 45.455 0.00 0.00 0.00 2.66
4787 10591 3.570125 TGTATCCATAGAAGGCTCGTCAG 59.430 47.826 0.00 0.00 0.00 3.51
4789 10593 3.612955 GCTGTATCCATAGAAGGCTCGTC 60.613 52.174 0.00 0.00 0.00 4.20
4790 10594 2.297597 GCTGTATCCATAGAAGGCTCGT 59.702 50.000 0.00 0.00 0.00 4.18
4869 10673 5.302568 TGGTGAAGTAGTACCATTATACCCG 59.697 44.000 0.00 0.00 41.80 5.28
5131 10947 3.438216 TGCTTCACAATCCTTGATCCA 57.562 42.857 0.00 0.00 0.00 3.41
5189 11005 5.712752 ACCATGATCCCTGAATGATTTCAT 58.287 37.500 0.00 0.00 40.95 2.57
5259 11075 1.476833 GGTGGAAGAGGCTTCAACACA 60.477 52.381 14.65 0.00 0.00 3.72
5314 11130 7.316393 TCTCCATATACGGAAATCTTGGAAT 57.684 36.000 0.00 0.00 33.65 3.01
5338 11157 9.449719 AATTTCTAACTTTTCACCAGACGATAT 57.550 29.630 0.00 0.00 0.00 1.63
5343 11162 6.264518 TCCCAATTTCTAACTTTTCACCAGAC 59.735 38.462 0.00 0.00 0.00 3.51
5394 11249 3.259123 GGAATGCCAAGGTTTTGTCATCT 59.741 43.478 0.00 0.00 32.11 2.90
5501 13346 8.940768 TCCAATTTTCAAACTTGTTAAAGAGG 57.059 30.769 0.09 0.00 36.84 3.69
5523 13368 1.178276 AAAGTTGTGCACGGTTTCCA 58.822 45.000 13.13 0.00 0.00 3.53
5534 13379 6.425504 GTCACATCTGAAGAGAAAAGTTGTG 58.574 40.000 6.73 6.73 40.53 3.33
5560 13405 6.040955 GTCACATCTTCATGGGTATACTCTGA 59.959 42.308 3.98 2.81 34.63 3.27
5604 13556 6.830736 TGTTATATGTGCGCAATATGCTAAG 58.169 36.000 23.58 0.00 42.25 2.18
5631 13583 3.181478 CCTCTTCCATCGGTAACAGTACC 60.181 52.174 0.00 0.00 45.73 3.34
5664 13736 9.698309 CCTGATGACAGTACTATTGTTAATAGG 57.302 37.037 11.89 0.00 42.03 2.57
5746 13833 2.134346 GAGAGAGGCGATGAGATTTGC 58.866 52.381 0.00 0.00 0.00 3.68
5758 13845 5.789643 ATAGTCATCTTCTTGAGAGAGGC 57.210 43.478 0.00 0.00 37.93 4.70
5794 13881 5.245075 CCTTGCCCCAGTTAAATTTTAGACA 59.755 40.000 0.00 0.00 0.00 3.41
5919 14018 2.303175 TCCCCCTTTTCGAACACAAAG 58.697 47.619 0.00 0.00 0.00 2.77
5959 14058 3.962557 CGGGAGGAGCCATCTTCT 58.037 61.111 0.00 0.00 38.95 2.85
6005 14104 1.593070 GCAGCGTTTCTATGCGACATG 60.593 52.381 0.00 0.00 41.30 3.21
6006 14105 0.652592 GCAGCGTTTCTATGCGACAT 59.347 50.000 0.00 0.00 41.30 3.06
6008 14107 0.442310 TTGCAGCGTTTCTATGCGAC 59.558 50.000 0.00 0.00 42.92 5.19
6009 14108 0.442310 GTTGCAGCGTTTCTATGCGA 59.558 50.000 0.00 0.00 42.92 5.10
6010 14109 0.521242 GGTTGCAGCGTTTCTATGCG 60.521 55.000 0.00 0.00 42.92 4.73
6011 14110 0.179163 GGGTTGCAGCGTTTCTATGC 60.179 55.000 0.00 0.00 40.40 3.14
6012 14111 1.131126 CAGGGTTGCAGCGTTTCTATG 59.869 52.381 0.00 0.00 0.00 2.23
6013 14112 1.453155 CAGGGTTGCAGCGTTTCTAT 58.547 50.000 0.00 0.00 0.00 1.98
6066 14196 1.079405 TCGGATGGAACGCACCTTC 60.079 57.895 6.02 6.02 34.62 3.46
6072 14203 1.794222 CAAACCTCGGATGGAACGC 59.206 57.895 0.00 0.00 0.00 4.84
6083 14214 3.373439 CAGCTGTAGAGATTGCAAACCTC 59.627 47.826 18.92 18.92 36.42 3.85
6179 14310 1.687612 CAGCCAAGGGGTGTCTGAT 59.312 57.895 6.30 0.00 45.06 2.90
6180 14311 3.160585 CAGCCAAGGGGTGTCTGA 58.839 61.111 6.30 0.00 45.06 3.27
6196 14327 0.249120 ACATTCATTCGACCGAGGCA 59.751 50.000 0.00 0.00 0.00 4.75
6204 14335 5.360999 AGGACAGTCTGATACATTCATTCGA 59.639 40.000 6.91 0.00 32.72 3.71
6207 14338 5.678583 CCAGGACAGTCTGATACATTCATT 58.321 41.667 6.91 0.00 36.93 2.57
6208 14339 4.444022 GCCAGGACAGTCTGATACATTCAT 60.444 45.833 6.91 0.00 36.93 2.57
6347 14521 4.730966 TCCAACCAATAAAGTTGTAGGCA 58.269 39.130 3.26 0.00 42.46 4.75
6362 14536 1.132849 TCTCCTCACTTCCTCCAACCA 60.133 52.381 0.00 0.00 0.00 3.67
6444 14621 2.753452 TCTACGAGATCAGGACACCAAC 59.247 50.000 0.00 0.00 0.00 3.77
6595 14772 4.592942 TGCATTGATCAGCTAGTTCCTTT 58.407 39.130 8.27 0.00 0.00 3.11
6679 14856 0.729116 CATGTGCTTAACAGAGCGGG 59.271 55.000 0.00 0.00 45.64 6.13
6685 14862 6.299023 TGTGTAGAAACATGTGCTTAACAG 57.701 37.500 0.00 0.00 43.64 3.16
6722 14905 1.696336 TCCTCAAAAGCAGAGACAGCT 59.304 47.619 0.00 0.00 45.97 4.24
6723 14906 2.175878 TCCTCAAAAGCAGAGACAGC 57.824 50.000 0.00 0.00 35.09 4.40
6724 14907 5.002516 AGATTTCCTCAAAAGCAGAGACAG 58.997 41.667 0.00 0.00 35.68 3.51
6755 14941 3.701040 TCAAAGGAGCCCTAATTGAATGC 59.299 43.478 6.10 0.00 30.33 3.56
6756 14942 6.097270 TGAATCAAAGGAGCCCTAATTGAATG 59.903 38.462 10.52 0.00 35.06 2.67
6757 14943 6.197168 TGAATCAAAGGAGCCCTAATTGAAT 58.803 36.000 10.52 4.94 35.06 2.57
6758 14944 5.579047 TGAATCAAAGGAGCCCTAATTGAA 58.421 37.500 10.52 0.00 35.06 2.69
6759 14945 5.191727 TGAATCAAAGGAGCCCTAATTGA 57.808 39.130 9.44 9.44 35.62 2.57
6782 14968 9.958125 ATCCTCCAAAAATCCTATAAAATTCCT 57.042 29.630 0.00 0.00 0.00 3.36
6824 15010 7.288852 TGAATCAAAGGACCAACATAGGAAAAA 59.711 33.333 0.00 0.00 0.00 1.94
6825 15011 6.780031 TGAATCAAAGGACCAACATAGGAAAA 59.220 34.615 0.00 0.00 0.00 2.29
6826 15012 6.310941 TGAATCAAAGGACCAACATAGGAAA 58.689 36.000 0.00 0.00 0.00 3.13
6827 15013 5.886609 TGAATCAAAGGACCAACATAGGAA 58.113 37.500 0.00 0.00 0.00 3.36
6829 15015 6.488006 CCTATGAATCAAAGGACCAACATAGG 59.512 42.308 0.33 0.33 44.75 2.57
6831 15017 7.206789 TCCTATGAATCAAAGGACCAACATA 57.793 36.000 0.00 0.00 34.46 2.29
6833 15019 5.512942 TCCTATGAATCAAAGGACCAACA 57.487 39.130 0.00 0.00 34.46 3.33
6834 15020 6.603201 TCAATCCTATGAATCAAAGGACCAAC 59.397 38.462 0.00 0.00 42.08 3.77
6835 15021 6.730447 TCAATCCTATGAATCAAAGGACCAA 58.270 36.000 0.00 0.00 42.08 3.67
6836 15022 6.325993 TCAATCCTATGAATCAAAGGACCA 57.674 37.500 0.00 0.00 42.08 4.02
6837 15023 7.830099 ATTCAATCCTATGAATCAAAGGACC 57.170 36.000 0.00 0.00 44.64 4.46
6900 15086 7.993183 GGAGTGGATGTTAGATTTCCTATGAAA 59.007 37.037 0.00 0.00 44.22 2.69
6901 15087 7.127186 TGGAGTGGATGTTAGATTTCCTATGAA 59.873 37.037 0.00 0.00 0.00 2.57
6902 15088 6.615316 TGGAGTGGATGTTAGATTTCCTATGA 59.385 38.462 0.00 0.00 0.00 2.15
6903 15089 6.830912 TGGAGTGGATGTTAGATTTCCTATG 58.169 40.000 0.00 0.00 0.00 2.23
6904 15090 7.283329 GTTGGAGTGGATGTTAGATTTCCTAT 58.717 38.462 0.00 0.00 0.00 2.57
6905 15091 6.352737 GGTTGGAGTGGATGTTAGATTTCCTA 60.353 42.308 0.00 0.00 0.00 2.94
6906 15092 5.501156 GTTGGAGTGGATGTTAGATTTCCT 58.499 41.667 0.00 0.00 0.00 3.36
6907 15093 4.640647 GGTTGGAGTGGATGTTAGATTTCC 59.359 45.833 0.00 0.00 0.00 3.13
6908 15094 5.501156 AGGTTGGAGTGGATGTTAGATTTC 58.499 41.667 0.00 0.00 0.00 2.17
6909 15095 5.251700 AGAGGTTGGAGTGGATGTTAGATTT 59.748 40.000 0.00 0.00 0.00 2.17
6910 15096 4.785376 AGAGGTTGGAGTGGATGTTAGATT 59.215 41.667 0.00 0.00 0.00 2.40
6911 15097 4.366267 AGAGGTTGGAGTGGATGTTAGAT 58.634 43.478 0.00 0.00 0.00 1.98
6912 15098 3.791320 AGAGGTTGGAGTGGATGTTAGA 58.209 45.455 0.00 0.00 0.00 2.10
6913 15099 4.559862 AAGAGGTTGGAGTGGATGTTAG 57.440 45.455 0.00 0.00 0.00 2.34
6914 15100 4.993705 AAAGAGGTTGGAGTGGATGTTA 57.006 40.909 0.00 0.00 0.00 2.41
6915 15101 3.884037 AAAGAGGTTGGAGTGGATGTT 57.116 42.857 0.00 0.00 0.00 2.71
6916 15102 3.884037 AAAAGAGGTTGGAGTGGATGT 57.116 42.857 0.00 0.00 0.00 3.06
6917 15103 5.070001 TGTAAAAAGAGGTTGGAGTGGATG 58.930 41.667 0.00 0.00 0.00 3.51
6918 15104 5.319043 TGTAAAAAGAGGTTGGAGTGGAT 57.681 39.130 0.00 0.00 0.00 3.41
6919 15105 4.781775 TGTAAAAAGAGGTTGGAGTGGA 57.218 40.909 0.00 0.00 0.00 4.02
6920 15106 6.405278 AATTGTAAAAAGAGGTTGGAGTGG 57.595 37.500 0.00 0.00 0.00 4.00
6921 15107 6.265422 AGGAATTGTAAAAAGAGGTTGGAGTG 59.735 38.462 0.00 0.00 0.00 3.51
6922 15108 6.373759 AGGAATTGTAAAAAGAGGTTGGAGT 58.626 36.000 0.00 0.00 0.00 3.85
6923 15109 6.717084 AGAGGAATTGTAAAAAGAGGTTGGAG 59.283 38.462 0.00 0.00 0.00 3.86
6924 15110 6.490040 CAGAGGAATTGTAAAAAGAGGTTGGA 59.510 38.462 0.00 0.00 0.00 3.53
6925 15111 6.265422 ACAGAGGAATTGTAAAAAGAGGTTGG 59.735 38.462 0.00 0.00 0.00 3.77
6926 15112 7.277174 ACAGAGGAATTGTAAAAAGAGGTTG 57.723 36.000 0.00 0.00 0.00 3.77
6927 15113 7.898014 AACAGAGGAATTGTAAAAAGAGGTT 57.102 32.000 0.00 0.00 0.00 3.50
6928 15114 7.898014 AAACAGAGGAATTGTAAAAAGAGGT 57.102 32.000 0.00 0.00 0.00 3.85
6929 15115 9.249457 GAAAAACAGAGGAATTGTAAAAAGAGG 57.751 33.333 0.00 0.00 0.00 3.69
6930 15116 9.249457 GGAAAAACAGAGGAATTGTAAAAAGAG 57.751 33.333 0.00 0.00 0.00 2.85
6931 15117 8.201464 GGGAAAAACAGAGGAATTGTAAAAAGA 58.799 33.333 0.00 0.00 0.00 2.52
6932 15118 7.169140 CGGGAAAAACAGAGGAATTGTAAAAAG 59.831 37.037 0.00 0.00 0.00 2.27
6933 15119 6.981559 CGGGAAAAACAGAGGAATTGTAAAAA 59.018 34.615 0.00 0.00 0.00 1.94
6934 15120 6.097129 ACGGGAAAAACAGAGGAATTGTAAAA 59.903 34.615 0.00 0.00 0.00 1.52
6935 15121 5.595133 ACGGGAAAAACAGAGGAATTGTAAA 59.405 36.000 0.00 0.00 0.00 2.01
6936 15122 5.009210 CACGGGAAAAACAGAGGAATTGTAA 59.991 40.000 0.00 0.00 0.00 2.41
6937 15123 4.517453 CACGGGAAAAACAGAGGAATTGTA 59.483 41.667 0.00 0.00 0.00 2.41
6938 15124 3.317993 CACGGGAAAAACAGAGGAATTGT 59.682 43.478 0.00 0.00 0.00 2.71
6939 15125 3.857010 GCACGGGAAAAACAGAGGAATTG 60.857 47.826 0.00 0.00 0.00 2.32
6940 15126 2.296190 GCACGGGAAAAACAGAGGAATT 59.704 45.455 0.00 0.00 0.00 2.17
6941 15127 1.886542 GCACGGGAAAAACAGAGGAAT 59.113 47.619 0.00 0.00 0.00 3.01
6942 15128 1.314730 GCACGGGAAAAACAGAGGAA 58.685 50.000 0.00 0.00 0.00 3.36
6943 15129 0.536460 GGCACGGGAAAAACAGAGGA 60.536 55.000 0.00 0.00 0.00 3.71
6944 15130 0.821711 TGGCACGGGAAAAACAGAGG 60.822 55.000 0.00 0.00 0.00 3.69
6945 15131 1.200020 GATGGCACGGGAAAAACAGAG 59.800 52.381 0.00 0.00 0.00 3.35
6946 15132 1.243902 GATGGCACGGGAAAAACAGA 58.756 50.000 0.00 0.00 0.00 3.41
6947 15133 0.958091 TGATGGCACGGGAAAAACAG 59.042 50.000 0.00 0.00 0.00 3.16
6948 15134 1.403814 TTGATGGCACGGGAAAAACA 58.596 45.000 0.00 0.00 0.00 2.83
6949 15135 2.131972 GTTTGATGGCACGGGAAAAAC 58.868 47.619 0.00 0.00 0.00 2.43
6950 15136 1.757118 TGTTTGATGGCACGGGAAAAA 59.243 42.857 0.00 0.00 0.00 1.94
6951 15137 1.067821 GTGTTTGATGGCACGGGAAAA 59.932 47.619 0.00 0.00 0.00 2.29
6952 15138 0.671251 GTGTTTGATGGCACGGGAAA 59.329 50.000 0.00 0.00 0.00 3.13
6953 15139 0.179004 AGTGTTTGATGGCACGGGAA 60.179 50.000 0.00 0.00 40.26 3.97
6954 15140 0.605319 GAGTGTTTGATGGCACGGGA 60.605 55.000 0.00 0.00 40.26 5.14
6955 15141 0.888736 TGAGTGTTTGATGGCACGGG 60.889 55.000 0.00 0.00 40.26 5.28
6956 15142 1.167851 ATGAGTGTTTGATGGCACGG 58.832 50.000 0.00 0.00 40.26 4.94
6957 15143 2.587956 CAATGAGTGTTTGATGGCACG 58.412 47.619 0.00 0.00 40.26 5.34
6958 15144 2.029649 AGCAATGAGTGTTTGATGGCAC 60.030 45.455 0.00 0.00 35.98 5.01
6959 15145 2.241160 AGCAATGAGTGTTTGATGGCA 58.759 42.857 0.00 0.00 0.00 4.92
6960 15146 4.439305 TTAGCAATGAGTGTTTGATGGC 57.561 40.909 0.00 0.00 0.00 4.40
6961 15147 6.860080 AGAATTAGCAATGAGTGTTTGATGG 58.140 36.000 0.00 0.00 0.00 3.51
6964 15150 9.330063 CCTATAGAATTAGCAATGAGTGTTTGA 57.670 33.333 0.00 0.00 0.00 2.69
6965 15151 9.330063 TCCTATAGAATTAGCAATGAGTGTTTG 57.670 33.333 0.00 0.00 0.00 2.93
6968 15154 9.717942 GAATCCTATAGAATTAGCAATGAGTGT 57.282 33.333 0.00 0.00 0.00 3.55
6969 15155 9.716531 TGAATCCTATAGAATTAGCAATGAGTG 57.283 33.333 0.00 0.00 0.00 3.51
6975 15161 9.770097 CTCACTTGAATCCTATAGAATTAGCAA 57.230 33.333 0.00 0.00 0.00 3.91
6976 15162 7.875041 GCTCACTTGAATCCTATAGAATTAGCA 59.125 37.037 0.00 0.00 0.00 3.49
6977 15163 7.875041 TGCTCACTTGAATCCTATAGAATTAGC 59.125 37.037 0.00 0.00 0.00 3.09
6978 15164 9.941325 ATGCTCACTTGAATCCTATAGAATTAG 57.059 33.333 0.00 0.00 0.00 1.73
6979 15165 9.716531 CATGCTCACTTGAATCCTATAGAATTA 57.283 33.333 0.00 0.00 0.00 1.40
6980 15166 7.174599 GCATGCTCACTTGAATCCTATAGAATT 59.825 37.037 11.37 0.00 0.00 2.17
6981 15167 6.654161 GCATGCTCACTTGAATCCTATAGAAT 59.346 38.462 11.37 0.00 0.00 2.40
6982 15168 5.994054 GCATGCTCACTTGAATCCTATAGAA 59.006 40.000 11.37 0.00 0.00 2.10
6983 15169 5.512060 GGCATGCTCACTTGAATCCTATAGA 60.512 44.000 18.92 0.00 0.00 1.98
6984 15170 4.694509 GGCATGCTCACTTGAATCCTATAG 59.305 45.833 18.92 0.00 0.00 1.31
6985 15171 4.102996 TGGCATGCTCACTTGAATCCTATA 59.897 41.667 18.92 0.00 0.00 1.31
6986 15172 3.117776 TGGCATGCTCACTTGAATCCTAT 60.118 43.478 18.92 0.00 0.00 2.57
6987 15173 2.239402 TGGCATGCTCACTTGAATCCTA 59.761 45.455 18.92 0.00 0.00 2.94
6988 15174 1.005097 TGGCATGCTCACTTGAATCCT 59.995 47.619 18.92 0.00 0.00 3.24
6989 15175 1.133790 GTGGCATGCTCACTTGAATCC 59.866 52.381 23.79 4.13 32.78 3.01
6990 15176 2.089980 AGTGGCATGCTCACTTGAATC 58.910 47.619 26.48 6.23 42.17 2.52
6991 15177 2.089980 GAGTGGCATGCTCACTTGAAT 58.910 47.619 30.08 16.16 44.51 2.57
6992 15178 1.527034 GAGTGGCATGCTCACTTGAA 58.473 50.000 30.08 3.84 44.51 2.69
6993 15179 0.321919 GGAGTGGCATGCTCACTTGA 60.322 55.000 30.08 2.25 44.51 3.02
6994 15180 0.607217 TGGAGTGGCATGCTCACTTG 60.607 55.000 30.08 0.00 44.51 3.16
6995 15181 0.111061 TTGGAGTGGCATGCTCACTT 59.889 50.000 30.08 19.58 44.51 3.16
6996 15182 0.607489 GTTGGAGTGGCATGCTCACT 60.607 55.000 30.00 30.00 46.82 3.41
6997 15183 1.589716 GGTTGGAGTGGCATGCTCAC 61.590 60.000 23.70 23.70 34.83 3.51
6998 15184 1.303561 GGTTGGAGTGGCATGCTCA 60.304 57.895 18.92 11.22 34.83 4.26
6999 15185 2.048603 GGGTTGGAGTGGCATGCTC 61.049 63.158 18.92 11.26 0.00 4.26
7000 15186 1.207488 TAGGGTTGGAGTGGCATGCT 61.207 55.000 18.92 0.00 0.00 3.79
7001 15187 0.106519 ATAGGGTTGGAGTGGCATGC 60.107 55.000 9.90 9.90 0.00 4.06
7002 15188 2.439507 AGTATAGGGTTGGAGTGGCATG 59.560 50.000 0.00 0.00 0.00 4.06
7003 15189 2.776665 AGTATAGGGTTGGAGTGGCAT 58.223 47.619 0.00 0.00 0.00 4.40
7004 15190 2.263895 AGTATAGGGTTGGAGTGGCA 57.736 50.000 0.00 0.00 0.00 4.92
7005 15191 3.646736 AAAGTATAGGGTTGGAGTGGC 57.353 47.619 0.00 0.00 0.00 5.01
7006 15192 4.227527 AGGAAAAGTATAGGGTTGGAGTGG 59.772 45.833 0.00 0.00 0.00 4.00
7007 15193 5.437191 AGGAAAAGTATAGGGTTGGAGTG 57.563 43.478 0.00 0.00 0.00 3.51
7008 15194 7.147355 GGAATAGGAAAAGTATAGGGTTGGAGT 60.147 40.741 0.00 0.00 0.00 3.85
7009 15195 7.072581 AGGAATAGGAAAAGTATAGGGTTGGAG 59.927 40.741 0.00 0.00 0.00 3.86
7010 15196 6.912561 AGGAATAGGAAAAGTATAGGGTTGGA 59.087 38.462 0.00 0.00 0.00 3.53
7011 15197 7.150447 AGGAATAGGAAAAGTATAGGGTTGG 57.850 40.000 0.00 0.00 0.00 3.77
7012 15198 7.871463 CGTAGGAATAGGAAAAGTATAGGGTTG 59.129 40.741 0.00 0.00 0.00 3.77
7013 15199 7.566509 ACGTAGGAATAGGAAAAGTATAGGGTT 59.433 37.037 0.00 0.00 0.00 4.11
7014 15200 7.071917 ACGTAGGAATAGGAAAAGTATAGGGT 58.928 38.462 0.00 0.00 0.00 4.34
7015 15201 7.536159 ACGTAGGAATAGGAAAAGTATAGGG 57.464 40.000 0.00 0.00 0.00 3.53
7016 15202 9.828039 AAAACGTAGGAATAGGAAAAGTATAGG 57.172 33.333 0.00 0.00 0.00 2.57
7025 15211 9.743581 AGGATTTTAAAAACGTAGGAATAGGAA 57.256 29.630 4.44 0.00 0.00 3.36
7029 15215 9.868277 TCGTAGGATTTTAAAAACGTAGGAATA 57.132 29.630 20.97 7.87 29.50 1.75
7030 15216 8.776376 TCGTAGGATTTTAAAAACGTAGGAAT 57.224 30.769 20.97 0.00 29.50 3.01
7031 15217 8.600449 TTCGTAGGATTTTAAAAACGTAGGAA 57.400 30.769 25.49 25.49 35.55 3.36
7032 15218 8.776376 ATTCGTAGGATTTTAAAAACGTAGGA 57.224 30.769 20.08 20.08 30.07 2.94
7033 15219 8.658609 TGATTCGTAGGATTTTAAAAACGTAGG 58.341 33.333 17.67 17.53 0.00 3.18
7036 15222 9.389570 CTTTGATTCGTAGGATTTTAAAAACGT 57.610 29.630 17.67 13.31 0.00 3.99
7037 15223 9.601971 TCTTTGATTCGTAGGATTTTAAAAACG 57.398 29.630 13.97 13.97 0.00 3.60
7040 15226 8.241367 GCCTCTTTGATTCGTAGGATTTTAAAA 58.759 33.333 2.51 2.51 0.00 1.52
7041 15227 7.148137 GGCCTCTTTGATTCGTAGGATTTTAAA 60.148 37.037 0.00 0.00 0.00 1.52
7042 15228 6.317893 GGCCTCTTTGATTCGTAGGATTTTAA 59.682 38.462 0.00 0.00 0.00 1.52
7043 15229 5.820947 GGCCTCTTTGATTCGTAGGATTTTA 59.179 40.000 0.00 0.00 0.00 1.52
7044 15230 4.640647 GGCCTCTTTGATTCGTAGGATTTT 59.359 41.667 0.00 0.00 0.00 1.82
7045 15231 4.200092 GGCCTCTTTGATTCGTAGGATTT 58.800 43.478 0.00 0.00 0.00 2.17
7046 15232 3.433740 GGGCCTCTTTGATTCGTAGGATT 60.434 47.826 0.84 0.00 0.00 3.01
7047 15233 2.104963 GGGCCTCTTTGATTCGTAGGAT 59.895 50.000 0.84 0.00 0.00 3.24
7048 15234 1.485066 GGGCCTCTTTGATTCGTAGGA 59.515 52.381 0.84 0.00 0.00 2.94
7049 15235 1.486726 AGGGCCTCTTTGATTCGTAGG 59.513 52.381 0.00 0.00 0.00 3.18
7050 15236 2.990066 AGGGCCTCTTTGATTCGTAG 57.010 50.000 0.00 0.00 0.00 3.51
7051 15237 3.134081 CCTAAGGGCCTCTTTGATTCGTA 59.866 47.826 6.46 0.00 36.93 3.43
7052 15238 2.092914 CCTAAGGGCCTCTTTGATTCGT 60.093 50.000 6.46 0.00 36.93 3.85
7053 15239 2.565841 CCTAAGGGCCTCTTTGATTCG 58.434 52.381 6.46 0.00 36.93 3.34
7066 15252 3.498774 ATATGTTGAGCAGCCTAAGGG 57.501 47.619 0.00 0.00 0.00 3.95
7067 15253 5.220710 AGTATATGTTGAGCAGCCTAAGG 57.779 43.478 0.00 0.00 0.00 2.69
7068 15254 5.221521 TGGAGTATATGTTGAGCAGCCTAAG 60.222 44.000 0.00 0.00 0.00 2.18
7090 15276 4.096382 GGTTTACCTGTTGCATGATAGTGG 59.904 45.833 0.00 0.00 0.00 4.00
7091 15277 4.201812 CGGTTTACCTGTTGCATGATAGTG 60.202 45.833 0.00 0.00 0.00 2.74
7092 15278 3.938963 CGGTTTACCTGTTGCATGATAGT 59.061 43.478 0.00 0.00 0.00 2.12
7093 15279 3.312421 CCGGTTTACCTGTTGCATGATAG 59.688 47.826 0.00 0.00 0.00 2.08
7094 15280 3.275143 CCGGTTTACCTGTTGCATGATA 58.725 45.455 0.00 0.00 0.00 2.15
7210 15555 4.559153 ACAAACATAAAACATCTGCAGGC 58.441 39.130 15.13 0.00 0.00 4.85
7230 15575 3.126171 CGGACACAACTTTCTCAACAACA 59.874 43.478 0.00 0.00 0.00 3.33
7231 15576 3.372822 TCGGACACAACTTTCTCAACAAC 59.627 43.478 0.00 0.00 0.00 3.32
7238 15583 4.261031 CGGAAATTTCGGACACAACTTTCT 60.261 41.667 18.21 0.00 0.00 2.52
7239 15584 3.972502 CGGAAATTTCGGACACAACTTTC 59.027 43.478 18.21 0.00 0.00 2.62
7240 15585 3.794138 GCGGAAATTTCGGACACAACTTT 60.794 43.478 25.05 0.00 0.00 2.66
7315 15660 4.881273 TCTCTGAAGTGCTTTGTTTTAGCA 59.119 37.500 0.00 0.00 45.78 3.49
7370 15715 4.280789 AGAGTAACCCCACATATCCTCA 57.719 45.455 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.