Multiple sequence alignment - TraesCS2D01G466300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G466300 chr2D 100.000 3258 0 0 1 3258 571945058 571948315 0.000000e+00 6017.0
1 TraesCS2D01G466300 chr2D 95.305 213 10 0 2 214 243653024 243653236 4.030000e-89 339.0
2 TraesCS2D01G466300 chr2D 90.780 141 7 2 2701 2841 331753901 331754035 2.000000e-42 183.0
3 TraesCS2D01G466300 chr2D 87.857 140 11 5 2702 2841 47257143 47257276 3.360000e-35 159.0
4 TraesCS2D01G466300 chr2D 79.487 156 30 2 3079 3233 632463157 632463311 3.440000e-20 110.0
5 TraesCS2D01G466300 chr2B 90.098 1939 70 30 634 2532 685146669 685148525 0.000000e+00 2405.0
6 TraesCS2D01G466300 chr2B 88.308 650 48 10 2607 3255 685153946 685154568 0.000000e+00 754.0
7 TraesCS2D01G466300 chr2B 93.839 211 13 0 2 212 182966806 182966596 5.250000e-83 318.0
8 TraesCS2D01G466300 chr2B 89.706 136 8 2 2701 2836 74728714 74728585 5.590000e-38 169.0
9 TraesCS2D01G466300 chr2B 88.571 140 13 3 219 357 182966523 182966386 2.010000e-37 167.0
10 TraesCS2D01G466300 chr2B 76.737 331 57 14 1016 1336 797552822 797553142 2.010000e-37 167.0
11 TraesCS2D01G466300 chr2A 89.703 1447 50 31 1201 2595 710608598 710609997 0.000000e+00 1755.0
12 TraesCS2D01G466300 chr2A 92.161 944 39 9 620 1544 710456843 710457770 0.000000e+00 1301.0
13 TraesCS2D01G466300 chr2A 90.898 846 22 22 1592 2420 710457763 710458570 0.000000e+00 1085.0
14 TraesCS2D01G466300 chr2A 94.194 465 12 4 2585 3049 710610944 710611393 0.000000e+00 695.0
15 TraesCS2D01G466300 chr2A 94.017 234 13 1 970 1203 710603301 710603533 1.440000e-93 353.0
16 TraesCS2D01G466300 chr2A 93.162 117 8 0 3142 3258 710611770 710611886 4.320000e-39 172.0
17 TraesCS2D01G466300 chr2A 89.313 131 12 2 216 346 62264472 62264600 2.600000e-36 163.0
18 TraesCS2D01G466300 chr2A 86.713 143 12 3 2700 2841 675088506 675088642 5.630000e-33 152.0
19 TraesCS2D01G466300 chr3A 95.261 211 10 0 4 214 449732881 449732671 5.210000e-88 335.0
20 TraesCS2D01G466300 chr3A 79.310 406 61 12 2870 3258 628158118 628158517 2.490000e-66 263.0
21 TraesCS2D01G466300 chr3A 75.980 408 49 28 2868 3258 7129313 7129688 7.230000e-37 165.0
22 TraesCS2D01G466300 chr3A 81.481 135 22 3 2868 3000 729586514 729586381 1.240000e-19 108.0
23 TraesCS2D01G466300 chr5D 94.787 211 11 0 2 212 445866399 445866609 2.420000e-86 329.0
24 TraesCS2D01G466300 chr5D 95.610 205 9 0 6 210 507861582 507861786 2.420000e-86 329.0
25 TraesCS2D01G466300 chr5D 93.868 212 13 0 1 212 34052816 34052605 1.460000e-83 320.0
26 TraesCS2D01G466300 chr5D 76.991 339 60 9 2922 3244 15317883 15317547 9.290000e-41 178.0
27 TraesCS2D01G466300 chr4D 94.419 215 11 1 1 214 293366677 293366463 2.420000e-86 329.0
28 TraesCS2D01G466300 chr4D 87.591 137 14 3 219 354 283974770 283974904 4.350000e-34 156.0
29 TraesCS2D01G466300 chr4D 81.481 162 26 4 3099 3258 432459008 432459167 2.640000e-26 130.0
30 TraesCS2D01G466300 chr1A 94.393 214 12 0 1 214 131685393 131685180 2.420000e-86 329.0
31 TraesCS2D01G466300 chr1A 88.489 139 13 3 220 357 559056610 559056474 7.230000e-37 165.0
32 TraesCS2D01G466300 chr7D 93.839 211 13 0 2 212 599082055 599081845 5.250000e-83 318.0
33 TraesCS2D01G466300 chr7D 75.424 354 69 13 2868 3204 72534389 72534741 4.350000e-34 156.0
34 TraesCS2D01G466300 chr7D 85.616 146 17 4 214 357 37918570 37918713 2.020000e-32 150.0
35 TraesCS2D01G466300 chrUn 80.556 324 46 13 1016 1332 15341662 15341975 1.950000e-57 233.0
36 TraesCS2D01G466300 chrUn 80.952 315 43 13 1025 1332 272747995 272747691 1.950000e-57 233.0
37 TraesCS2D01G466300 chrUn 76.737 331 57 14 1016 1336 275012911 275013231 2.010000e-37 167.0
38 TraesCS2D01G466300 chrUn 77.627 295 46 16 1049 1336 315958287 315958006 9.350000e-36 161.0
39 TraesCS2D01G466300 chr7B 76.322 397 78 12 2868 3258 622611935 622612321 7.130000e-47 198.0
40 TraesCS2D01G466300 chr3D 76.923 377 58 14 2900 3258 14177270 14177635 1.540000e-43 187.0
41 TraesCS2D01G466300 chr3D 77.540 187 26 7 2866 3038 453137499 453137683 7.440000e-17 99.0
42 TraesCS2D01G466300 chr4B 89.189 148 8 2 2693 2840 82257289 82257150 9.290000e-41 178.0
43 TraesCS2D01G466300 chr4B 80.734 218 22 11 2857 3056 447638711 447638926 5.630000e-33 152.0
44 TraesCS2D01G466300 chr4B 100.000 30 0 0 477 506 41240639 41240668 4.540000e-04 56.5
45 TraesCS2D01G466300 chr4A 87.755 147 13 5 211 356 152652151 152652009 2.010000e-37 167.0
46 TraesCS2D01G466300 chr4A 82.143 112 19 1 2870 2980 736960561 736960450 9.620000e-16 95.3
47 TraesCS2D01G466300 chr1D 79.654 231 44 3 3029 3258 419211480 419211252 2.600000e-36 163.0
48 TraesCS2D01G466300 chr1D 86.620 142 16 3 216 356 205135687 205135826 1.570000e-33 154.0
49 TraesCS2D01G466300 chr1D 80.702 171 17 7 2867 3022 373114233 373114402 5.710000e-23 119.0
50 TraesCS2D01G466300 chr6A 87.143 140 15 3 219 357 171792695 171792832 4.350000e-34 156.0
51 TraesCS2D01G466300 chr6D 80.928 194 34 3 3065 3257 467817736 467817927 2.020000e-32 150.0
52 TraesCS2D01G466300 chr6D 85.915 142 17 3 216 356 445932717 445932856 7.280000e-32 148.0
53 TraesCS2D01G466300 chr7A 74.576 354 74 11 2868 3206 77620979 77621331 1.220000e-29 141.0
54 TraesCS2D01G466300 chr1B 82.667 150 26 0 3101 3250 304386792 304386643 2.040000e-27 134.0
55 TraesCS2D01G466300 chr5A 86.458 96 11 2 2887 2981 700619428 700619334 1.600000e-18 104.0
56 TraesCS2D01G466300 chr6B 81.053 95 17 1 2891 2984 652636569 652636663 1.250000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G466300 chr2D 571945058 571948315 3257 False 6017 6017 100.0000 1 3258 1 chr2D.!!$F4 3257
1 TraesCS2D01G466300 chr2B 685146669 685148525 1856 False 2405 2405 90.0980 634 2532 1 chr2B.!!$F1 1898
2 TraesCS2D01G466300 chr2B 685153946 685154568 622 False 754 754 88.3080 2607 3255 1 chr2B.!!$F2 648
3 TraesCS2D01G466300 chr2A 710456843 710458570 1727 False 1193 1301 91.5295 620 2420 2 chr2A.!!$F4 1800
4 TraesCS2D01G466300 chr2A 710608598 710611886 3288 False 874 1755 92.3530 1201 3258 3 chr2A.!!$F5 2057

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
87 88 0.033366 GGACATGGGCGCAAACTTTT 59.967 50.0 10.83 0.0 0.0 2.27 F
451 452 0.033796 TCATACTCCCTCCGTTCCGT 60.034 55.0 0.00 0.0 0.0 4.69 F
602 603 0.249489 GCACGAGCGGACTGGATTAT 60.249 55.0 0.00 0.0 0.0 1.28 F
604 605 0.389391 ACGAGCGGACTGGATTATGG 59.611 55.0 0.00 0.0 0.0 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1694 1750 0.036105 TCGCCATTGCAGTGAGACAT 60.036 50.000 11.31 0.00 37.32 3.06 R
1695 1751 0.036105 ATCGCCATTGCAGTGAGACA 60.036 50.000 11.31 0.00 37.32 3.41 R
1697 1753 0.249955 TGATCGCCATTGCAGTGAGA 59.750 50.000 11.31 9.98 37.32 3.27 R
2581 2684 1.075374 AGCAATTTGTACAGGAGCCCA 59.925 47.619 0.00 0.00 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.781570 TTCGTTGGTGGCGATGAA 57.218 50.000 0.00 0.00 38.21 2.57
18 19 2.240230 TTCGTTGGTGGCGATGAAC 58.760 52.632 0.00 0.00 38.21 3.18
19 20 0.250124 TTCGTTGGTGGCGATGAACT 60.250 50.000 0.00 0.00 38.21 3.01
20 21 0.250124 TCGTTGGTGGCGATGAACTT 60.250 50.000 0.00 0.00 33.09 2.66
21 22 0.165944 CGTTGGTGGCGATGAACTTC 59.834 55.000 0.00 0.00 0.00 3.01
22 23 1.234821 GTTGGTGGCGATGAACTTCA 58.765 50.000 0.00 0.00 0.00 3.02
23 24 1.606668 GTTGGTGGCGATGAACTTCAA 59.393 47.619 0.00 0.00 0.00 2.69
24 25 1.522668 TGGTGGCGATGAACTTCAAG 58.477 50.000 0.00 0.00 0.00 3.02
25 26 1.071542 TGGTGGCGATGAACTTCAAGA 59.928 47.619 0.00 0.00 0.00 3.02
26 27 2.290260 TGGTGGCGATGAACTTCAAGAT 60.290 45.455 0.00 0.00 0.00 2.40
27 28 2.096496 GGTGGCGATGAACTTCAAGATG 59.904 50.000 0.00 0.00 0.00 2.90
28 29 2.096496 GTGGCGATGAACTTCAAGATGG 59.904 50.000 0.00 0.00 0.00 3.51
29 30 2.027285 TGGCGATGAACTTCAAGATGGA 60.027 45.455 0.00 0.00 0.00 3.41
30 31 2.352960 GGCGATGAACTTCAAGATGGAC 59.647 50.000 0.00 0.00 0.00 4.02
31 32 3.265791 GCGATGAACTTCAAGATGGACT 58.734 45.455 0.00 0.00 0.00 3.85
32 33 3.308323 GCGATGAACTTCAAGATGGACTC 59.692 47.826 0.00 0.00 0.00 3.36
33 34 3.549471 CGATGAACTTCAAGATGGACTCG 59.451 47.826 0.00 0.00 0.00 4.18
34 35 4.675408 CGATGAACTTCAAGATGGACTCGA 60.675 45.833 0.00 0.00 0.00 4.04
35 36 4.808414 TGAACTTCAAGATGGACTCGAT 57.192 40.909 0.00 0.00 0.00 3.59
36 37 4.498241 TGAACTTCAAGATGGACTCGATG 58.502 43.478 0.00 0.00 0.00 3.84
37 38 3.533606 ACTTCAAGATGGACTCGATGG 57.466 47.619 0.00 0.00 0.00 3.51
38 39 2.208431 CTTCAAGATGGACTCGATGGC 58.792 52.381 0.00 0.00 0.00 4.40
39 40 0.103026 TCAAGATGGACTCGATGGCG 59.897 55.000 0.00 0.00 39.35 5.69
40 41 1.227380 AAGATGGACTCGATGGCGC 60.227 57.895 0.00 0.00 37.46 6.53
41 42 2.960957 AAGATGGACTCGATGGCGCG 62.961 60.000 0.00 0.00 37.46 6.86
42 43 4.592192 ATGGACTCGATGGCGCGG 62.592 66.667 8.83 0.00 37.46 6.46
44 45 4.933064 GGACTCGATGGCGCGGAG 62.933 72.222 8.83 8.10 37.46 4.63
45 46 4.194720 GACTCGATGGCGCGGAGT 62.195 66.667 17.94 17.94 37.46 3.85
46 47 4.498520 ACTCGATGGCGCGGAGTG 62.499 66.667 17.42 6.35 43.41 3.51
47 48 4.193334 CTCGATGGCGCGGAGTGA 62.193 66.667 8.83 0.00 43.07 3.41
48 49 3.699955 CTCGATGGCGCGGAGTGAA 62.700 63.158 8.83 0.00 43.07 3.18
49 50 3.257561 CGATGGCGCGGAGTGAAG 61.258 66.667 8.83 0.00 43.07 3.02
50 51 2.184322 GATGGCGCGGAGTGAAGA 59.816 61.111 8.83 0.00 43.07 2.87
51 52 1.227380 GATGGCGCGGAGTGAAGAT 60.227 57.895 8.83 0.00 43.07 2.40
52 53 1.218230 GATGGCGCGGAGTGAAGATC 61.218 60.000 8.83 0.00 43.07 2.75
53 54 2.956964 GGCGCGGAGTGAAGATCG 60.957 66.667 8.83 0.00 43.07 3.69
54 55 2.102357 GCGCGGAGTGAAGATCGA 59.898 61.111 8.83 0.00 43.07 3.59
55 56 2.224885 GCGCGGAGTGAAGATCGAC 61.225 63.158 8.83 0.00 43.07 4.20
56 57 1.586564 CGCGGAGTGAAGATCGACC 60.587 63.158 0.00 0.00 43.07 4.79
57 58 1.511305 GCGGAGTGAAGATCGACCA 59.489 57.895 0.00 0.00 0.00 4.02
58 59 0.108804 GCGGAGTGAAGATCGACCAA 60.109 55.000 0.00 0.00 0.00 3.67
59 60 1.914634 CGGAGTGAAGATCGACCAAG 58.085 55.000 0.00 0.00 0.00 3.61
60 61 1.472878 CGGAGTGAAGATCGACCAAGA 59.527 52.381 0.00 0.00 0.00 3.02
61 62 2.099921 CGGAGTGAAGATCGACCAAGAT 59.900 50.000 0.00 0.00 0.00 2.40
62 63 3.452474 GGAGTGAAGATCGACCAAGATG 58.548 50.000 0.00 0.00 0.00 2.90
63 64 3.452474 GAGTGAAGATCGACCAAGATGG 58.548 50.000 0.00 0.00 45.02 3.51
72 73 2.350895 CCAAGATGGTGCCGGACA 59.649 61.111 5.05 0.00 31.35 4.02
73 74 1.077501 CCAAGATGGTGCCGGACAT 60.078 57.895 5.05 5.94 31.35 3.06
74 75 1.378882 CCAAGATGGTGCCGGACATG 61.379 60.000 5.05 0.00 31.35 3.21
75 76 1.077501 AAGATGGTGCCGGACATGG 60.078 57.895 5.05 0.00 0.00 3.66
76 77 2.516930 GATGGTGCCGGACATGGG 60.517 66.667 5.05 0.00 0.00 4.00
83 84 4.114997 CCGGACATGGGCGCAAAC 62.115 66.667 10.83 0.00 0.00 2.93
84 85 3.055719 CGGACATGGGCGCAAACT 61.056 61.111 10.83 0.00 0.00 2.66
85 86 2.625823 CGGACATGGGCGCAAACTT 61.626 57.895 10.83 0.00 0.00 2.66
86 87 1.665442 GGACATGGGCGCAAACTTT 59.335 52.632 10.83 0.00 0.00 2.66
87 88 0.033366 GGACATGGGCGCAAACTTTT 59.967 50.000 10.83 0.00 0.00 2.27
88 89 1.139163 GACATGGGCGCAAACTTTTG 58.861 50.000 10.83 2.58 41.03 2.44
89 90 0.463620 ACATGGGCGCAAACTTTTGT 59.536 45.000 10.83 3.31 40.24 2.83
90 91 1.683917 ACATGGGCGCAAACTTTTGTA 59.316 42.857 10.83 0.00 40.24 2.41
91 92 2.288152 ACATGGGCGCAAACTTTTGTAG 60.288 45.455 10.83 0.42 40.24 2.74
92 93 0.671251 TGGGCGCAAACTTTTGTAGG 59.329 50.000 10.83 0.00 40.24 3.18
93 94 0.038618 GGGCGCAAACTTTTGTAGGG 60.039 55.000 10.83 0.00 40.24 3.53
94 95 0.666274 GGCGCAAACTTTTGTAGGGC 60.666 55.000 10.83 0.00 41.95 5.19
95 96 0.666274 GCGCAAACTTTTGTAGGGCC 60.666 55.000 0.30 0.00 40.24 5.80
96 97 0.038618 CGCAAACTTTTGTAGGGCCC 60.039 55.000 16.46 16.46 40.24 5.80
97 98 1.338107 GCAAACTTTTGTAGGGCCCT 58.662 50.000 31.35 31.35 40.24 5.19
98 99 1.272490 GCAAACTTTTGTAGGGCCCTC 59.728 52.381 32.80 20.68 40.24 4.30
99 100 2.876581 CAAACTTTTGTAGGGCCCTCT 58.123 47.619 32.80 8.60 33.59 3.69
100 101 3.230976 CAAACTTTTGTAGGGCCCTCTT 58.769 45.455 32.80 7.63 33.59 2.85
101 102 3.612795 AACTTTTGTAGGGCCCTCTTT 57.387 42.857 32.80 7.15 0.00 2.52
102 103 3.612795 ACTTTTGTAGGGCCCTCTTTT 57.387 42.857 32.80 6.65 0.00 2.27
103 104 3.230976 ACTTTTGTAGGGCCCTCTTTTG 58.769 45.455 32.80 17.71 0.00 2.44
104 105 1.627864 TTTGTAGGGCCCTCTTTTGC 58.372 50.000 32.80 8.63 0.00 3.68
105 106 0.608035 TTGTAGGGCCCTCTTTTGCG 60.608 55.000 32.80 0.00 0.00 4.85
106 107 1.002502 GTAGGGCCCTCTTTTGCGT 60.003 57.895 32.80 2.85 0.00 5.24
107 108 0.608308 GTAGGGCCCTCTTTTGCGTT 60.608 55.000 32.80 1.90 0.00 4.84
108 109 0.111639 TAGGGCCCTCTTTTGCGTTT 59.888 50.000 32.80 1.24 0.00 3.60
109 110 1.006220 GGGCCCTCTTTTGCGTTTG 60.006 57.895 17.04 0.00 0.00 2.93
110 111 1.739667 GGCCCTCTTTTGCGTTTGT 59.260 52.632 0.00 0.00 0.00 2.83
111 112 0.318699 GGCCCTCTTTTGCGTTTGTC 60.319 55.000 0.00 0.00 0.00 3.18
112 113 0.660300 GCCCTCTTTTGCGTTTGTCG 60.660 55.000 0.00 0.00 43.12 4.35
113 114 0.661020 CCCTCTTTTGCGTTTGTCGT 59.339 50.000 0.00 0.00 42.13 4.34
114 115 1.868498 CCCTCTTTTGCGTTTGTCGTA 59.132 47.619 0.00 0.00 42.13 3.43
115 116 2.482721 CCCTCTTTTGCGTTTGTCGTAT 59.517 45.455 0.00 0.00 42.13 3.06
116 117 3.058501 CCCTCTTTTGCGTTTGTCGTATT 60.059 43.478 0.00 0.00 42.13 1.89
117 118 3.906008 CCTCTTTTGCGTTTGTCGTATTG 59.094 43.478 0.00 0.00 42.13 1.90
118 119 4.319190 CCTCTTTTGCGTTTGTCGTATTGA 60.319 41.667 0.00 0.00 42.13 2.57
119 120 5.158101 TCTTTTGCGTTTGTCGTATTGAA 57.842 34.783 0.00 0.00 42.13 2.69
120 121 4.965158 TCTTTTGCGTTTGTCGTATTGAAC 59.035 37.500 0.00 0.00 42.13 3.18
121 122 4.539509 TTTGCGTTTGTCGTATTGAACT 57.460 36.364 0.00 0.00 42.13 3.01
122 123 4.539509 TTGCGTTTGTCGTATTGAACTT 57.460 36.364 0.00 0.00 42.13 2.66
123 124 3.867665 TGCGTTTGTCGTATTGAACTTG 58.132 40.909 0.00 0.00 42.13 3.16
124 125 3.223157 GCGTTTGTCGTATTGAACTTGG 58.777 45.455 0.00 0.00 42.13 3.61
125 126 3.223157 CGTTTGTCGTATTGAACTTGGC 58.777 45.455 0.00 0.00 34.52 4.52
126 127 3.059188 CGTTTGTCGTATTGAACTTGGCT 60.059 43.478 0.00 0.00 34.52 4.75
127 128 4.553938 CGTTTGTCGTATTGAACTTGGCTT 60.554 41.667 0.00 0.00 34.52 4.35
128 129 5.278604 GTTTGTCGTATTGAACTTGGCTTT 58.721 37.500 0.00 0.00 0.00 3.51
129 130 5.508200 TTGTCGTATTGAACTTGGCTTTT 57.492 34.783 0.00 0.00 0.00 2.27
130 131 6.621316 TTGTCGTATTGAACTTGGCTTTTA 57.379 33.333 0.00 0.00 0.00 1.52
131 132 6.811253 TGTCGTATTGAACTTGGCTTTTAT 57.189 33.333 0.00 0.00 0.00 1.40
132 133 7.209471 TGTCGTATTGAACTTGGCTTTTATT 57.791 32.000 0.00 0.00 0.00 1.40
133 134 7.653647 TGTCGTATTGAACTTGGCTTTTATTT 58.346 30.769 0.00 0.00 0.00 1.40
134 135 8.784994 TGTCGTATTGAACTTGGCTTTTATTTA 58.215 29.630 0.00 0.00 0.00 1.40
135 136 9.058424 GTCGTATTGAACTTGGCTTTTATTTAC 57.942 33.333 0.00 0.00 0.00 2.01
136 137 7.958567 TCGTATTGAACTTGGCTTTTATTTACG 59.041 33.333 0.00 0.00 0.00 3.18
137 138 6.944557 ATTGAACTTGGCTTTTATTTACGC 57.055 33.333 0.00 0.00 0.00 4.42
138 139 5.440234 TGAACTTGGCTTTTATTTACGCA 57.560 34.783 0.00 0.00 0.00 5.24
139 140 6.019779 TGAACTTGGCTTTTATTTACGCAT 57.980 33.333 0.00 0.00 0.00 4.73
140 141 7.147143 TGAACTTGGCTTTTATTTACGCATA 57.853 32.000 0.00 0.00 0.00 3.14
141 142 7.594714 TGAACTTGGCTTTTATTTACGCATAA 58.405 30.769 0.00 0.00 0.00 1.90
142 143 8.082852 TGAACTTGGCTTTTATTTACGCATAAA 58.917 29.630 0.00 0.00 34.78 1.40
143 144 8.819643 AACTTGGCTTTTATTTACGCATAAAA 57.180 26.923 0.00 7.27 36.62 1.52
144 145 8.234887 ACTTGGCTTTTATTTACGCATAAAAC 57.765 30.769 0.00 3.35 34.88 2.43
145 146 8.085909 ACTTGGCTTTTATTTACGCATAAAACT 58.914 29.630 0.00 0.00 34.88 2.66
146 147 7.804614 TGGCTTTTATTTACGCATAAAACTG 57.195 32.000 0.00 0.00 34.88 3.16
147 148 7.371936 TGGCTTTTATTTACGCATAAAACTGT 58.628 30.769 0.00 0.00 34.88 3.55
148 149 7.327275 TGGCTTTTATTTACGCATAAAACTGTG 59.673 33.333 0.00 0.00 34.88 3.66
149 150 7.327518 GGCTTTTATTTACGCATAAAACTGTGT 59.672 33.333 0.00 0.00 42.27 3.72
150 151 8.696175 GCTTTTATTTACGCATAAAACTGTGTT 58.304 29.630 0.00 0.00 40.24 3.32
155 156 8.889849 ATTTACGCATAAAACTGTGTTATGTC 57.110 30.769 24.42 17.69 39.90 3.06
156 157 4.953269 ACGCATAAAACTGTGTTATGTCG 58.047 39.130 27.01 27.01 39.90 4.35
157 158 4.449743 ACGCATAAAACTGTGTTATGTCGT 59.550 37.500 27.80 27.80 41.40 4.34
158 159 5.049954 ACGCATAAAACTGTGTTATGTCGTT 60.050 36.000 27.80 19.49 42.30 3.85
159 160 5.849081 CGCATAAAACTGTGTTATGTCGTTT 59.151 36.000 24.42 3.74 39.90 3.60
160 161 6.183359 CGCATAAAACTGTGTTATGTCGTTTG 60.183 38.462 24.42 6.70 39.90 2.93
161 162 6.853872 GCATAAAACTGTGTTATGTCGTTTGA 59.146 34.615 24.42 0.00 39.90 2.69
162 163 7.377397 GCATAAAACTGTGTTATGTCGTTTGAA 59.623 33.333 24.42 0.00 39.90 2.69
163 164 9.393249 CATAAAACTGTGTTATGTCGTTTGAAT 57.607 29.630 18.52 0.00 35.24 2.57
164 165 9.959749 ATAAAACTGTGTTATGTCGTTTGAATT 57.040 25.926 2.44 0.00 0.00 2.17
165 166 8.696410 AAAACTGTGTTATGTCGTTTGAATTT 57.304 26.923 0.00 0.00 0.00 1.82
166 167 7.678194 AACTGTGTTATGTCGTTTGAATTTG 57.322 32.000 0.00 0.00 0.00 2.32
167 168 7.022055 ACTGTGTTATGTCGTTTGAATTTGA 57.978 32.000 0.00 0.00 0.00 2.69
168 169 7.476667 ACTGTGTTATGTCGTTTGAATTTGAA 58.523 30.769 0.00 0.00 0.00 2.69
169 170 7.431084 ACTGTGTTATGTCGTTTGAATTTGAAC 59.569 33.333 0.00 0.00 0.00 3.18
170 171 7.476667 TGTGTTATGTCGTTTGAATTTGAACT 58.523 30.769 4.16 0.00 0.00 3.01
171 172 7.971168 TGTGTTATGTCGTTTGAATTTGAACTT 59.029 29.630 4.16 0.00 0.00 2.66
172 173 9.440784 GTGTTATGTCGTTTGAATTTGAACTTA 57.559 29.630 4.16 0.00 0.00 2.24
177 178 8.918961 TGTCGTTTGAATTTGAACTTATTTGT 57.081 26.923 4.16 0.00 0.00 2.83
178 179 8.802856 TGTCGTTTGAATTTGAACTTATTTGTG 58.197 29.630 4.16 0.00 0.00 3.33
179 180 8.265998 GTCGTTTGAATTTGAACTTATTTGTGG 58.734 33.333 4.16 0.00 0.00 4.17
180 181 8.191446 TCGTTTGAATTTGAACTTATTTGTGGA 58.809 29.630 4.16 0.00 0.00 4.02
181 182 8.812329 CGTTTGAATTTGAACTTATTTGTGGAA 58.188 29.630 4.16 0.00 0.00 3.53
184 185 8.655651 TGAATTTGAACTTATTTGTGGAAACC 57.344 30.769 0.00 0.00 0.00 3.27
185 186 8.482128 TGAATTTGAACTTATTTGTGGAAACCT 58.518 29.630 0.00 0.00 0.00 3.50
186 187 9.974980 GAATTTGAACTTATTTGTGGAAACCTA 57.025 29.630 0.00 0.00 0.00 3.08
188 189 9.927668 ATTTGAACTTATTTGTGGAAACCTATG 57.072 29.630 0.00 0.00 0.00 2.23
189 190 8.472007 TTGAACTTATTTGTGGAAACCTATGT 57.528 30.769 0.00 0.00 0.00 2.29
190 191 8.106247 TGAACTTATTTGTGGAAACCTATGTC 57.894 34.615 0.00 0.00 0.00 3.06
191 192 7.721842 TGAACTTATTTGTGGAAACCTATGTCA 59.278 33.333 0.00 0.00 0.00 3.58
192 193 8.472007 AACTTATTTGTGGAAACCTATGTCAA 57.528 30.769 0.00 0.00 0.00 3.18
193 194 8.650143 ACTTATTTGTGGAAACCTATGTCAAT 57.350 30.769 0.00 0.00 0.00 2.57
194 195 9.088987 ACTTATTTGTGGAAACCTATGTCAATT 57.911 29.630 0.00 0.00 0.00 2.32
195 196 9.357652 CTTATTTGTGGAAACCTATGTCAATTG 57.642 33.333 0.00 0.00 0.00 2.32
196 197 4.782019 TGTGGAAACCTATGTCAATTGC 57.218 40.909 0.00 0.00 0.00 3.56
197 198 3.190327 TGTGGAAACCTATGTCAATTGCG 59.810 43.478 0.00 0.00 0.00 4.85
198 199 3.438781 GTGGAAACCTATGTCAATTGCGA 59.561 43.478 0.00 0.00 0.00 5.10
199 200 3.689161 TGGAAACCTATGTCAATTGCGAG 59.311 43.478 0.00 0.00 0.00 5.03
200 201 3.938963 GGAAACCTATGTCAATTGCGAGA 59.061 43.478 0.00 0.00 0.00 4.04
201 202 4.394920 GGAAACCTATGTCAATTGCGAGAA 59.605 41.667 0.00 0.00 0.00 2.87
202 203 5.066505 GGAAACCTATGTCAATTGCGAGAAT 59.933 40.000 0.00 0.00 0.00 2.40
203 204 6.404734 GGAAACCTATGTCAATTGCGAGAATT 60.405 38.462 0.00 0.00 0.00 2.17
204 205 5.490139 ACCTATGTCAATTGCGAGAATTG 57.510 39.130 12.00 12.00 38.60 2.32
215 216 2.770532 GCGAGAATTGCCGTTTTCTAC 58.229 47.619 0.00 0.00 40.55 2.59
251 252 4.710167 CGGGTCCGTTTGGGGGTC 62.710 72.222 0.55 0.00 36.01 4.46
252 253 3.254617 GGGTCCGTTTGGGGGTCT 61.255 66.667 0.00 0.00 36.01 3.85
253 254 2.033602 GGTCCGTTTGGGGGTCTG 59.966 66.667 0.00 0.00 36.01 3.51
254 255 2.671963 GTCCGTTTGGGGGTCTGC 60.672 66.667 0.00 0.00 36.01 4.26
255 256 3.172106 TCCGTTTGGGGGTCTGCA 61.172 61.111 0.00 0.00 36.01 4.41
256 257 2.035626 CCGTTTGGGGGTCTGCAT 59.964 61.111 0.00 0.00 0.00 3.96
257 258 2.046285 CCGTTTGGGGGTCTGCATC 61.046 63.158 0.00 0.00 0.00 3.91
258 259 1.002134 CGTTTGGGGGTCTGCATCT 60.002 57.895 0.00 0.00 0.00 2.90
259 260 1.308069 CGTTTGGGGGTCTGCATCTG 61.308 60.000 0.00 0.00 0.00 2.90
260 261 0.251341 GTTTGGGGGTCTGCATCTGT 60.251 55.000 0.00 0.00 0.00 3.41
261 262 1.004277 GTTTGGGGGTCTGCATCTGTA 59.996 52.381 0.00 0.00 0.00 2.74
262 263 0.911769 TTGGGGGTCTGCATCTGTAG 59.088 55.000 0.00 0.00 0.00 2.74
263 264 1.147153 GGGGGTCTGCATCTGTAGC 59.853 63.158 0.00 0.00 0.00 3.58
264 265 1.626356 GGGGGTCTGCATCTGTAGCA 61.626 60.000 0.00 0.00 40.19 3.49
265 266 0.253044 GGGGTCTGCATCTGTAGCAA 59.747 55.000 0.00 0.00 42.17 3.91
266 267 1.373570 GGGTCTGCATCTGTAGCAAC 58.626 55.000 0.00 0.00 42.17 4.17
267 268 1.373570 GGTCTGCATCTGTAGCAACC 58.626 55.000 0.00 0.00 42.17 3.77
268 269 1.373570 GTCTGCATCTGTAGCAACCC 58.626 55.000 0.00 0.00 42.17 4.11
269 270 0.108186 TCTGCATCTGTAGCAACCCG 60.108 55.000 0.00 0.00 42.17 5.28
270 271 0.108186 CTGCATCTGTAGCAACCCGA 60.108 55.000 0.00 0.00 42.17 5.14
271 272 0.108186 TGCATCTGTAGCAACCCGAG 60.108 55.000 0.00 0.00 39.39 4.63
272 273 1.432270 GCATCTGTAGCAACCCGAGC 61.432 60.000 0.00 0.00 0.00 5.03
273 274 0.811616 CATCTGTAGCAACCCGAGCC 60.812 60.000 0.00 0.00 0.00 4.70
274 275 1.264749 ATCTGTAGCAACCCGAGCCA 61.265 55.000 0.00 0.00 0.00 4.75
275 276 1.448540 CTGTAGCAACCCGAGCCAG 60.449 63.158 0.00 0.00 0.00 4.85
276 277 2.172483 CTGTAGCAACCCGAGCCAGT 62.172 60.000 0.00 0.00 0.00 4.00
277 278 1.448013 GTAGCAACCCGAGCCAGTC 60.448 63.158 0.00 0.00 0.00 3.51
278 279 2.656069 TAGCAACCCGAGCCAGTCC 61.656 63.158 0.00 0.00 0.00 3.85
280 281 4.003788 CAACCCGAGCCAGTCCGT 62.004 66.667 0.00 0.00 0.00 4.69
281 282 2.283388 AACCCGAGCCAGTCCGTA 60.283 61.111 0.00 0.00 0.00 4.02
282 283 1.909781 AACCCGAGCCAGTCCGTAA 60.910 57.895 0.00 0.00 0.00 3.18
283 284 1.474332 AACCCGAGCCAGTCCGTAAA 61.474 55.000 0.00 0.00 0.00 2.01
284 285 1.294138 CCCGAGCCAGTCCGTAAAA 59.706 57.895 0.00 0.00 0.00 1.52
285 286 0.739813 CCCGAGCCAGTCCGTAAAAG 60.740 60.000 0.00 0.00 0.00 2.27
286 287 1.359459 CCGAGCCAGTCCGTAAAAGC 61.359 60.000 0.00 0.00 0.00 3.51
287 288 1.683790 CGAGCCAGTCCGTAAAAGCG 61.684 60.000 0.00 0.00 0.00 4.68
296 297 2.778187 CCGTAAAAGCGGTTTTTCCA 57.222 45.000 28.08 9.94 46.11 3.53
297 298 3.291809 CCGTAAAAGCGGTTTTTCCAT 57.708 42.857 28.08 8.45 46.11 3.41
298 299 2.983803 CCGTAAAAGCGGTTTTTCCATG 59.016 45.455 28.08 16.21 46.11 3.66
299 300 3.304794 CCGTAAAAGCGGTTTTTCCATGA 60.305 43.478 28.08 8.50 46.11 3.07
300 301 4.291783 CGTAAAAGCGGTTTTTCCATGAA 58.708 39.130 28.08 7.79 39.61 2.57
301 302 4.147479 CGTAAAAGCGGTTTTTCCATGAAC 59.853 41.667 28.08 17.40 39.61 3.18
302 303 4.400529 AAAAGCGGTTTTTCCATGAACT 57.599 36.364 19.03 0.00 33.79 3.01
303 304 3.369546 AAGCGGTTTTTCCATGAACTG 57.630 42.857 0.00 0.00 35.69 3.16
304 305 2.306847 AGCGGTTTTTCCATGAACTGT 58.693 42.857 0.00 0.00 35.17 3.55
305 306 3.482436 AGCGGTTTTTCCATGAACTGTA 58.518 40.909 0.00 0.00 35.17 2.74
306 307 3.886505 AGCGGTTTTTCCATGAACTGTAA 59.113 39.130 0.00 0.00 35.17 2.41
307 308 4.339814 AGCGGTTTTTCCATGAACTGTAAA 59.660 37.500 0.00 0.00 35.17 2.01
308 309 4.443063 GCGGTTTTTCCATGAACTGTAAAC 59.557 41.667 0.00 0.00 35.17 2.01
309 310 4.673311 CGGTTTTTCCATGAACTGTAAACG 59.327 41.667 0.00 0.00 35.57 3.60
310 311 4.443063 GGTTTTTCCATGAACTGTAAACGC 59.557 41.667 0.00 0.00 35.97 4.84
311 312 3.529634 TTTCCATGAACTGTAAACGCG 57.470 42.857 3.53 3.53 0.00 6.01
312 313 2.157834 TCCATGAACTGTAAACGCGT 57.842 45.000 5.58 5.58 0.00 6.01
313 314 2.485903 TCCATGAACTGTAAACGCGTT 58.514 42.857 20.79 20.79 0.00 4.84
314 315 2.873472 TCCATGAACTGTAAACGCGTTT 59.127 40.909 36.15 36.15 36.63 3.60
315 316 3.312973 TCCATGAACTGTAAACGCGTTTT 59.687 39.130 38.53 22.74 34.23 2.43
316 317 3.420576 CCATGAACTGTAAACGCGTTTTG 59.579 43.478 38.53 28.67 34.23 2.44
317 318 3.743567 TGAACTGTAAACGCGTTTTGT 57.256 38.095 38.53 29.25 34.23 2.83
318 319 3.418094 TGAACTGTAAACGCGTTTTGTG 58.582 40.909 38.53 28.07 34.23 3.33
319 320 2.461897 ACTGTAAACGCGTTTTGTGG 57.538 45.000 38.53 26.43 34.23 4.17
320 321 1.064357 ACTGTAAACGCGTTTTGTGGG 59.936 47.619 38.53 24.96 34.23 4.61
321 322 0.248539 TGTAAACGCGTTTTGTGGGC 60.249 50.000 38.53 21.80 34.23 5.36
322 323 0.935831 GTAAACGCGTTTTGTGGGCC 60.936 55.000 38.53 15.98 34.23 5.80
323 324 2.389866 TAAACGCGTTTTGTGGGCCG 62.390 55.000 38.53 0.00 34.23 6.13
343 344 3.536917 CGGATGCGGGGTCTGCTA 61.537 66.667 0.00 0.00 0.00 3.49
344 345 2.423446 GGATGCGGGGTCTGCTAG 59.577 66.667 0.30 0.00 0.00 3.42
345 346 2.134287 GGATGCGGGGTCTGCTAGA 61.134 63.158 0.00 0.00 0.00 2.43
346 347 1.365633 GATGCGGGGTCTGCTAGAG 59.634 63.158 0.00 0.00 0.00 2.43
347 348 1.075970 ATGCGGGGTCTGCTAGAGA 60.076 57.895 0.00 0.00 0.00 3.10
348 349 0.470833 ATGCGGGGTCTGCTAGAGAT 60.471 55.000 0.00 0.00 31.63 2.75
349 350 1.365633 GCGGGGTCTGCTAGAGATG 59.634 63.158 0.00 0.00 31.63 2.90
350 351 1.365633 CGGGGTCTGCTAGAGATGC 59.634 63.158 0.00 0.00 31.63 3.91
351 352 1.112315 CGGGGTCTGCTAGAGATGCT 61.112 60.000 0.00 0.00 31.63 3.79
352 353 0.678950 GGGGTCTGCTAGAGATGCTC 59.321 60.000 0.00 0.00 31.63 4.26
353 354 1.703411 GGGTCTGCTAGAGATGCTCT 58.297 55.000 0.00 2.22 43.83 4.09
354 355 2.489985 GGGGTCTGCTAGAGATGCTCTA 60.490 54.545 0.00 4.30 41.50 2.43
355 356 3.226777 GGGTCTGCTAGAGATGCTCTAA 58.773 50.000 5.75 0.00 41.74 2.10
356 357 3.255642 GGGTCTGCTAGAGATGCTCTAAG 59.744 52.174 5.75 2.25 41.74 2.18
357 358 3.305335 GGTCTGCTAGAGATGCTCTAAGC 60.305 52.174 5.75 10.60 41.74 3.09
358 359 2.551887 TCTGCTAGAGATGCTCTAAGCG 59.448 50.000 5.75 7.82 46.26 4.68
359 360 2.551887 CTGCTAGAGATGCTCTAAGCGA 59.448 50.000 5.75 3.46 46.26 4.93
360 361 2.292016 TGCTAGAGATGCTCTAAGCGAC 59.708 50.000 5.75 0.00 46.26 5.19
361 362 2.351350 GCTAGAGATGCTCTAAGCGACC 60.351 54.545 5.75 0.00 46.26 4.79
362 363 2.065899 AGAGATGCTCTAAGCGACCT 57.934 50.000 0.00 0.00 46.26 3.85
363 364 1.680735 AGAGATGCTCTAAGCGACCTG 59.319 52.381 0.00 0.00 46.26 4.00
364 365 1.678627 GAGATGCTCTAAGCGACCTGA 59.321 52.381 0.00 0.00 46.26 3.86
365 366 2.295909 GAGATGCTCTAAGCGACCTGAT 59.704 50.000 0.00 0.00 46.26 2.90
366 367 2.295909 AGATGCTCTAAGCGACCTGATC 59.704 50.000 0.00 0.00 46.26 2.92
378 379 3.219052 GACCTGATCGAGAAAAGACGT 57.781 47.619 0.00 0.00 0.00 4.34
379 380 3.172824 GACCTGATCGAGAAAAGACGTC 58.827 50.000 7.70 7.70 0.00 4.34
380 381 2.557056 ACCTGATCGAGAAAAGACGTCA 59.443 45.455 19.50 0.00 0.00 4.35
381 382 2.917971 CCTGATCGAGAAAAGACGTCAC 59.082 50.000 19.50 6.17 0.00 3.67
382 383 3.565516 CTGATCGAGAAAAGACGTCACA 58.434 45.455 19.50 1.46 0.00 3.58
383 384 4.169508 CTGATCGAGAAAAGACGTCACAT 58.830 43.478 19.50 2.14 0.00 3.21
384 385 4.166523 TGATCGAGAAAAGACGTCACATC 58.833 43.478 19.50 11.94 0.00 3.06
385 386 3.636282 TCGAGAAAAGACGTCACATCA 57.364 42.857 19.50 0.00 0.00 3.07
386 387 3.305964 TCGAGAAAAGACGTCACATCAC 58.694 45.455 19.50 9.65 0.00 3.06
387 388 3.049912 CGAGAAAAGACGTCACATCACA 58.950 45.455 19.50 0.00 0.00 3.58
388 389 3.120286 CGAGAAAAGACGTCACATCACAG 59.880 47.826 19.50 4.37 0.00 3.66
389 390 3.393800 AGAAAAGACGTCACATCACAGG 58.606 45.455 19.50 0.00 0.00 4.00
390 391 2.910688 AAAGACGTCACATCACAGGT 57.089 45.000 19.50 0.00 0.00 4.00
391 392 2.910688 AAGACGTCACATCACAGGTT 57.089 45.000 19.50 0.00 0.00 3.50
392 393 2.910688 AGACGTCACATCACAGGTTT 57.089 45.000 19.50 0.00 0.00 3.27
393 394 2.483876 AGACGTCACATCACAGGTTTG 58.516 47.619 19.50 0.00 0.00 2.93
394 395 0.944386 ACGTCACATCACAGGTTTGC 59.056 50.000 0.00 0.00 0.00 3.68
395 396 0.238289 CGTCACATCACAGGTTTGCC 59.762 55.000 0.00 0.00 0.00 4.52
396 397 0.598065 GTCACATCACAGGTTTGCCC 59.402 55.000 0.00 0.00 34.57 5.36
397 398 0.184692 TCACATCACAGGTTTGCCCA 59.815 50.000 0.00 0.00 34.66 5.36
398 399 1.039068 CACATCACAGGTTTGCCCAA 58.961 50.000 0.00 0.00 34.66 4.12
399 400 1.411977 CACATCACAGGTTTGCCCAAA 59.588 47.619 0.00 0.00 34.66 3.28
407 408 3.586430 GTTTGCCCAAACGAAGCAT 57.414 47.368 7.99 0.00 40.85 3.79
408 409 1.418373 GTTTGCCCAAACGAAGCATC 58.582 50.000 7.99 0.00 40.85 3.91
409 410 1.000274 GTTTGCCCAAACGAAGCATCT 60.000 47.619 7.99 0.00 40.85 2.90
410 411 1.327303 TTGCCCAAACGAAGCATCTT 58.673 45.000 0.00 0.00 36.20 2.40
411 412 0.881118 TGCCCAAACGAAGCATCTTC 59.119 50.000 0.00 0.00 0.00 2.87
412 413 0.881118 GCCCAAACGAAGCATCTTCA 59.119 50.000 7.27 0.00 0.00 3.02
413 414 1.401539 GCCCAAACGAAGCATCTTCAC 60.402 52.381 7.27 0.00 0.00 3.18
414 415 1.135972 CCCAAACGAAGCATCTTCACG 60.136 52.381 7.27 0.00 0.00 4.35
415 416 1.798223 CCAAACGAAGCATCTTCACGA 59.202 47.619 7.27 0.00 0.00 4.35
416 417 2.411547 CCAAACGAAGCATCTTCACGAC 60.412 50.000 7.27 0.00 0.00 4.34
417 418 1.060713 AACGAAGCATCTTCACGACG 58.939 50.000 7.27 0.00 0.00 5.12
418 419 1.341802 CGAAGCATCTTCACGACGC 59.658 57.895 7.27 0.00 0.00 5.19
419 420 1.344226 CGAAGCATCTTCACGACGCA 61.344 55.000 7.27 0.00 32.13 5.24
420 421 0.368227 GAAGCATCTTCACGACGCAG 59.632 55.000 0.00 0.00 32.13 5.18
421 422 0.038251 AAGCATCTTCACGACGCAGA 60.038 50.000 0.00 0.00 32.13 4.26
422 423 0.457509 AGCATCTTCACGACGCAGAG 60.458 55.000 0.00 0.00 32.13 3.35
423 424 0.456824 GCATCTTCACGACGCAGAGA 60.457 55.000 0.00 0.00 29.63 3.10
424 425 1.800655 GCATCTTCACGACGCAGAGAT 60.801 52.381 0.00 0.00 29.63 2.75
425 426 2.541794 GCATCTTCACGACGCAGAGATA 60.542 50.000 0.00 0.00 29.63 1.98
426 427 2.826979 TCTTCACGACGCAGAGATAC 57.173 50.000 0.00 0.00 0.00 2.24
427 428 1.062148 TCTTCACGACGCAGAGATACG 59.938 52.381 0.00 0.00 0.00 3.06
428 429 0.800631 TTCACGACGCAGAGATACGT 59.199 50.000 0.00 0.00 46.91 3.57
429 430 2.555770 CACGACGCAGAGATACGTG 58.444 57.895 0.00 0.00 43.71 4.49
430 431 0.861866 CACGACGCAGAGATACGTGG 60.862 60.000 0.00 0.00 46.43 4.94
431 432 1.022982 ACGACGCAGAGATACGTGGA 61.023 55.000 0.00 0.00 43.71 4.02
432 433 0.308068 CGACGCAGAGATACGTGGAT 59.692 55.000 0.00 0.00 43.71 3.41
433 434 1.660614 CGACGCAGAGATACGTGGATC 60.661 57.143 0.00 0.00 43.71 3.36
434 435 1.333931 GACGCAGAGATACGTGGATCA 59.666 52.381 0.00 0.00 43.71 2.92
435 436 1.957177 ACGCAGAGATACGTGGATCAT 59.043 47.619 0.00 0.00 41.76 2.45
436 437 3.146847 ACGCAGAGATACGTGGATCATA 58.853 45.455 0.00 0.00 41.76 2.15
437 438 3.058155 ACGCAGAGATACGTGGATCATAC 60.058 47.826 0.00 0.00 41.76 2.39
438 439 3.189495 CGCAGAGATACGTGGATCATACT 59.811 47.826 0.00 0.00 0.00 2.12
439 440 4.670478 CGCAGAGATACGTGGATCATACTC 60.670 50.000 0.00 0.00 0.00 2.59
440 441 4.380023 GCAGAGATACGTGGATCATACTCC 60.380 50.000 0.00 0.00 35.74 3.85
441 442 4.156922 CAGAGATACGTGGATCATACTCCC 59.843 50.000 0.00 0.00 34.12 4.30
442 443 4.043561 AGAGATACGTGGATCATACTCCCT 59.956 45.833 0.00 0.00 34.12 4.20
443 444 4.337145 AGATACGTGGATCATACTCCCTC 58.663 47.826 0.00 0.00 34.12 4.30
444 445 1.705873 ACGTGGATCATACTCCCTCC 58.294 55.000 0.00 0.00 34.12 4.30
445 446 0.598562 CGTGGATCATACTCCCTCCG 59.401 60.000 0.00 0.00 34.12 4.63
446 447 1.705873 GTGGATCATACTCCCTCCGT 58.294 55.000 0.00 0.00 34.12 4.69
447 448 2.040178 GTGGATCATACTCCCTCCGTT 58.960 52.381 0.00 0.00 34.12 4.44
448 449 2.036089 GTGGATCATACTCCCTCCGTTC 59.964 54.545 0.00 0.00 34.12 3.95
449 450 1.619332 GGATCATACTCCCTCCGTTCC 59.381 57.143 0.00 0.00 0.00 3.62
450 451 1.269998 GATCATACTCCCTCCGTTCCG 59.730 57.143 0.00 0.00 0.00 4.30
451 452 0.033796 TCATACTCCCTCCGTTCCGT 60.034 55.000 0.00 0.00 0.00 4.69
452 453 1.212688 TCATACTCCCTCCGTTCCGTA 59.787 52.381 0.00 0.00 0.00 4.02
453 454 2.026641 CATACTCCCTCCGTTCCGTAA 58.973 52.381 0.00 0.00 0.00 3.18
454 455 1.463674 TACTCCCTCCGTTCCGTAAC 58.536 55.000 0.00 0.00 0.00 2.50
471 472 4.185413 CGTAGTGCGTCCATGCTT 57.815 55.556 0.00 0.00 35.36 3.91
472 473 2.456000 CGTAGTGCGTCCATGCTTT 58.544 52.632 0.00 0.00 35.36 3.51
473 474 0.796312 CGTAGTGCGTCCATGCTTTT 59.204 50.000 0.00 0.00 35.36 2.27
474 475 1.196808 CGTAGTGCGTCCATGCTTTTT 59.803 47.619 0.00 0.00 35.36 1.94
475 476 2.724839 CGTAGTGCGTCCATGCTTTTTC 60.725 50.000 0.00 0.00 35.36 2.29
476 477 1.317613 AGTGCGTCCATGCTTTTTCA 58.682 45.000 0.00 0.00 35.36 2.69
477 478 1.267806 AGTGCGTCCATGCTTTTTCAG 59.732 47.619 0.00 0.00 35.36 3.02
478 479 1.266718 GTGCGTCCATGCTTTTTCAGA 59.733 47.619 0.00 0.00 35.36 3.27
479 480 2.095059 GTGCGTCCATGCTTTTTCAGAT 60.095 45.455 0.00 0.00 35.36 2.90
480 481 2.557924 TGCGTCCATGCTTTTTCAGATT 59.442 40.909 0.00 0.00 35.36 2.40
481 482 3.005684 TGCGTCCATGCTTTTTCAGATTT 59.994 39.130 0.00 0.00 35.36 2.17
482 483 4.217334 TGCGTCCATGCTTTTTCAGATTTA 59.783 37.500 0.00 0.00 35.36 1.40
483 484 5.160641 GCGTCCATGCTTTTTCAGATTTAA 58.839 37.500 0.00 0.00 0.00 1.52
484 485 5.287035 GCGTCCATGCTTTTTCAGATTTAAG 59.713 40.000 0.00 0.00 0.00 1.85
485 486 6.381801 CGTCCATGCTTTTTCAGATTTAAGT 58.618 36.000 0.00 0.00 0.00 2.24
486 487 6.863126 CGTCCATGCTTTTTCAGATTTAAGTT 59.137 34.615 0.00 0.00 0.00 2.66
487 488 7.382218 CGTCCATGCTTTTTCAGATTTAAGTTT 59.618 33.333 0.00 0.00 0.00 2.66
488 489 8.490355 GTCCATGCTTTTTCAGATTTAAGTTTG 58.510 33.333 0.00 0.00 0.00 2.93
489 490 8.420222 TCCATGCTTTTTCAGATTTAAGTTTGA 58.580 29.630 0.00 0.00 0.00 2.69
490 491 9.211485 CCATGCTTTTTCAGATTTAAGTTTGAT 57.789 29.630 0.00 0.00 0.00 2.57
492 493 8.816640 TGCTTTTTCAGATTTAAGTTTGATCC 57.183 30.769 0.00 0.00 0.00 3.36
493 494 8.641541 TGCTTTTTCAGATTTAAGTTTGATCCT 58.358 29.630 0.00 0.00 0.00 3.24
531 532 9.520204 AATTCAATGATATAGTTTTTGCTTCCG 57.480 29.630 0.00 0.00 0.00 4.30
532 533 7.624360 TCAATGATATAGTTTTTGCTTCCGT 57.376 32.000 0.00 0.00 0.00 4.69
533 534 7.693952 TCAATGATATAGTTTTTGCTTCCGTC 58.306 34.615 0.00 0.00 0.00 4.79
534 535 7.335673 TCAATGATATAGTTTTTGCTTCCGTCA 59.664 33.333 0.00 0.00 0.00 4.35
535 536 6.662414 TGATATAGTTTTTGCTTCCGTCAG 57.338 37.500 0.00 0.00 0.00 3.51
536 537 3.831715 ATAGTTTTTGCTTCCGTCAGC 57.168 42.857 0.00 0.00 40.55 4.26
541 542 2.049156 TGCTTCCGTCAGCAGTCG 60.049 61.111 1.73 0.00 45.14 4.18
542 543 2.049063 GCTTCCGTCAGCAGTCGT 60.049 61.111 0.00 0.00 39.83 4.34
543 544 2.089349 GCTTCCGTCAGCAGTCGTC 61.089 63.158 0.00 0.00 39.83 4.20
544 545 1.797933 CTTCCGTCAGCAGTCGTCG 60.798 63.158 0.00 0.00 0.00 5.12
545 546 2.183858 CTTCCGTCAGCAGTCGTCGA 62.184 60.000 0.00 0.00 0.00 4.20
546 547 2.453773 TTCCGTCAGCAGTCGTCGAC 62.454 60.000 17.70 17.70 0.00 4.20
547 548 2.865603 CGTCAGCAGTCGTCGACG 60.866 66.667 31.30 31.30 44.34 5.12
548 549 2.251667 GTCAGCAGTCGTCGACGT 59.748 61.111 34.40 16.49 40.80 4.34
549 550 1.370172 GTCAGCAGTCGTCGACGTT 60.370 57.895 34.40 22.22 40.80 3.99
550 551 1.370051 TCAGCAGTCGTCGACGTTG 60.370 57.895 34.40 30.72 40.80 4.10
551 552 2.050351 AGCAGTCGTCGACGTTGG 60.050 61.111 34.40 24.56 40.80 3.77
552 553 2.354305 GCAGTCGTCGACGTTGGT 60.354 61.111 34.40 16.47 40.80 3.67
553 554 1.947642 GCAGTCGTCGACGTTGGTT 60.948 57.895 34.40 15.48 40.80 3.67
554 555 0.661187 GCAGTCGTCGACGTTGGTTA 60.661 55.000 34.40 14.15 40.80 2.85
555 556 1.757574 CAGTCGTCGACGTTGGTTAA 58.242 50.000 34.40 13.39 40.80 2.01
556 557 2.322161 CAGTCGTCGACGTTGGTTAAT 58.678 47.619 34.40 13.28 40.80 1.40
557 558 2.727798 CAGTCGTCGACGTTGGTTAATT 59.272 45.455 34.40 10.12 40.80 1.40
558 559 3.182972 CAGTCGTCGACGTTGGTTAATTT 59.817 43.478 34.40 6.32 40.80 1.82
559 560 4.382457 CAGTCGTCGACGTTGGTTAATTTA 59.618 41.667 34.40 10.55 40.80 1.40
560 561 5.061311 CAGTCGTCGACGTTGGTTAATTTAT 59.939 40.000 34.40 6.52 40.80 1.40
561 562 6.251163 CAGTCGTCGACGTTGGTTAATTTATA 59.749 38.462 34.40 9.89 40.80 0.98
562 563 6.806249 AGTCGTCGACGTTGGTTAATTTATAA 59.194 34.615 34.40 9.21 40.80 0.98
563 564 7.489113 AGTCGTCGACGTTGGTTAATTTATAAT 59.511 33.333 34.40 9.12 40.80 1.28
564 565 8.110002 GTCGTCGACGTTGGTTAATTTATAATT 58.890 33.333 34.40 0.00 40.80 1.40
565 566 9.295214 TCGTCGACGTTGGTTAATTTATAATTA 57.705 29.630 34.40 8.13 40.80 1.40
566 567 9.898806 CGTCGACGTTGGTTAATTTATAATTAA 57.101 29.630 29.08 0.00 34.11 1.40
588 589 9.834628 ATTAATTTTAAATCTCGAAAAGCACGA 57.165 25.926 0.00 0.00 38.11 4.35
600 601 2.125512 GCACGAGCGGACTGGATT 60.126 61.111 0.00 0.00 0.00 3.01
601 602 1.141019 GCACGAGCGGACTGGATTA 59.859 57.895 0.00 0.00 0.00 1.75
602 603 0.249489 GCACGAGCGGACTGGATTAT 60.249 55.000 0.00 0.00 0.00 1.28
603 604 1.491670 CACGAGCGGACTGGATTATG 58.508 55.000 0.00 0.00 0.00 1.90
604 605 0.389391 ACGAGCGGACTGGATTATGG 59.611 55.000 0.00 0.00 0.00 2.74
605 606 0.673985 CGAGCGGACTGGATTATGGA 59.326 55.000 0.00 0.00 0.00 3.41
606 607 1.068588 CGAGCGGACTGGATTATGGAA 59.931 52.381 0.00 0.00 0.00 3.53
607 608 2.484889 GAGCGGACTGGATTATGGAAC 58.515 52.381 0.00 0.00 0.00 3.62
608 609 1.202533 AGCGGACTGGATTATGGAACG 60.203 52.381 0.00 0.00 0.00 3.95
609 610 1.865865 CGGACTGGATTATGGAACGG 58.134 55.000 0.00 0.00 0.00 4.44
610 611 1.411246 CGGACTGGATTATGGAACGGA 59.589 52.381 0.00 0.00 0.00 4.69
611 612 2.545952 CGGACTGGATTATGGAACGGAG 60.546 54.545 0.00 0.00 0.00 4.63
612 613 2.224305 GGACTGGATTATGGAACGGAGG 60.224 54.545 0.00 0.00 0.00 4.30
613 614 2.698797 GACTGGATTATGGAACGGAGGA 59.301 50.000 0.00 0.00 0.00 3.71
614 615 2.700897 ACTGGATTATGGAACGGAGGAG 59.299 50.000 0.00 0.00 0.00 3.69
615 616 2.700897 CTGGATTATGGAACGGAGGAGT 59.299 50.000 0.00 0.00 0.00 3.85
616 617 3.895656 CTGGATTATGGAACGGAGGAGTA 59.104 47.826 0.00 0.00 0.00 2.59
617 618 3.640029 TGGATTATGGAACGGAGGAGTAC 59.360 47.826 0.00 0.00 0.00 2.73
618 619 3.006644 GGATTATGGAACGGAGGAGTACC 59.993 52.174 0.00 0.00 0.00 3.34
638 639 2.265467 AAATACGGCTGGGACGCCAT 62.265 55.000 0.00 0.00 45.48 4.40
723 724 1.436195 GCAGCACAACACTGTCGGAA 61.436 55.000 0.00 0.00 37.47 4.30
869 884 0.909610 GGCGATCCATCTATCCCCCA 60.910 60.000 0.00 0.00 0.00 4.96
1014 1032 5.114081 CGAGACTAAATGGGGTCGTTTAAT 58.886 41.667 0.00 0.00 34.90 1.40
1023 1041 0.876399 GGTCGTTTAATGGCCACGTT 59.124 50.000 8.16 0.95 35.40 3.99
1416 1446 4.202192 TGAGTTGGTGTAAATTGCAATGCA 60.202 37.500 13.82 2.72 36.47 3.96
1473 1505 3.668656 GTGAAATTCGTAGCACCAAAAGC 59.331 43.478 0.00 0.00 0.00 3.51
1483 1515 0.675633 CACCAAAAGCCCAACTGAGG 59.324 55.000 0.00 0.00 0.00 3.86
1527 1562 9.502145 TTGATTTCGTTGCATAATAATCTTGTC 57.498 29.630 11.15 0.00 0.00 3.18
1589 1636 2.598439 GCAATTGCGATCGTCATCTCAC 60.598 50.000 15.87 0.00 0.00 3.51
1640 1693 8.892723 CAGTAACATTATCAGCCAGTTTTGATA 58.107 33.333 0.00 0.00 35.72 2.15
1693 1749 9.825972 TTTTGCGAGAAAGATAGATTTTACTTG 57.174 29.630 0.00 0.00 0.00 3.16
1694 1750 8.771920 TTGCGAGAAAGATAGATTTTACTTGA 57.228 30.769 0.00 0.00 0.00 3.02
1695 1751 8.948631 TGCGAGAAAGATAGATTTTACTTGAT 57.051 30.769 0.00 0.00 0.00 2.57
1696 1752 8.820933 TGCGAGAAAGATAGATTTTACTTGATG 58.179 33.333 0.00 0.00 0.00 3.07
1697 1753 8.821894 GCGAGAAAGATAGATTTTACTTGATGT 58.178 33.333 0.00 0.00 0.00 3.06
1795 1851 1.002366 CGTCGGAATTCCTGCTCTTG 58.998 55.000 22.05 5.00 0.00 3.02
1862 1918 1.063642 ACCTCCTCGTCATCCTCATCA 60.064 52.381 0.00 0.00 0.00 3.07
2265 2321 2.181021 CGTGGTCTAGTGGCGTCC 59.819 66.667 0.00 0.00 0.00 4.79
2332 2405 8.757789 GCAAAACATTATGATGTGATATGTTGG 58.242 33.333 3.56 0.00 45.58 3.77
2402 2475 7.967178 ACTTTGCAAATTGAGAAAAGTTTCAG 58.033 30.769 13.23 0.00 37.72 3.02
2469 2542 3.324846 TGCTTCATCCTACAAGTCAGTGT 59.675 43.478 0.00 0.00 35.43 3.55
2515 2618 6.035112 GCTAGTGCTCTTTTCATGTGTACTAC 59.965 42.308 0.00 0.00 36.03 2.73
2516 2619 6.102897 AGTGCTCTTTTCATGTGTACTACT 57.897 37.500 0.00 0.00 0.00 2.57
2517 2620 6.159988 AGTGCTCTTTTCATGTGTACTACTC 58.840 40.000 0.00 0.00 0.00 2.59
2518 2621 5.926542 GTGCTCTTTTCATGTGTACTACTCA 59.073 40.000 0.00 0.00 0.00 3.41
2578 2681 4.136796 GCAAGTCATGGCAGATGGTAATA 58.863 43.478 0.00 0.00 0.00 0.98
2580 2683 5.278169 GCAAGTCATGGCAGATGGTAATAAG 60.278 44.000 0.00 0.00 0.00 1.73
2581 2684 5.636903 AGTCATGGCAGATGGTAATAAGT 57.363 39.130 0.00 0.00 0.00 2.24
2582 2685 5.371526 AGTCATGGCAGATGGTAATAAGTG 58.628 41.667 0.00 0.00 0.00 3.16
2780 3841 4.401202 ACAAAGTTCCAACAAGAAATCCGT 59.599 37.500 0.00 0.00 0.00 4.69
2805 3866 2.959030 TGAGCCTAGCCATACTGTAGTG 59.041 50.000 0.00 0.00 0.00 2.74
2806 3867 3.223435 GAGCCTAGCCATACTGTAGTGA 58.777 50.000 0.00 0.00 0.00 3.41
2807 3868 3.226777 AGCCTAGCCATACTGTAGTGAG 58.773 50.000 0.00 0.00 0.00 3.51
2808 3869 3.117474 AGCCTAGCCATACTGTAGTGAGA 60.117 47.826 0.00 0.00 0.00 3.27
2809 3870 3.254657 GCCTAGCCATACTGTAGTGAGAG 59.745 52.174 0.00 0.00 0.00 3.20
2810 3871 4.465886 CCTAGCCATACTGTAGTGAGAGT 58.534 47.826 0.00 0.00 32.95 3.24
2814 3875 5.756918 AGCCATACTGTAGTGAGAGTTCTA 58.243 41.667 0.00 0.00 30.42 2.10
2878 3939 5.782845 TGTAGGTCCAATTTTAGGGCATTTT 59.217 36.000 0.00 0.00 30.51 1.82
2883 3944 6.937465 GGTCCAATTTTAGGGCATTTTTAACA 59.063 34.615 0.00 0.00 30.51 2.41
3006 4068 1.427819 CCAATTTACTCCACCGCGC 59.572 57.895 0.00 0.00 0.00 6.86
3022 4084 2.673114 CGCGGCGGCTGAGTAAAAA 61.673 57.895 15.84 0.00 36.88 1.94
3071 4133 1.024579 CCCTACAAATTCGCTGGCGT 61.025 55.000 14.55 0.00 40.74 5.68
3113 4175 2.813908 GCCACCGCTACCTCGTTG 60.814 66.667 0.00 0.00 0.00 4.10
3114 4176 2.813908 CCACCGCTACCTCGTTGC 60.814 66.667 0.00 0.00 0.00 4.17
3115 4177 2.261671 CACCGCTACCTCGTTGCT 59.738 61.111 0.00 0.00 32.61 3.91
3116 4178 1.374252 CACCGCTACCTCGTTGCTT 60.374 57.895 0.00 0.00 32.61 3.91
3117 4179 1.080025 ACCGCTACCTCGTTGCTTC 60.080 57.895 0.00 0.00 32.61 3.86
3118 4180 1.810030 CCGCTACCTCGTTGCTTCC 60.810 63.158 0.00 0.00 32.61 3.46
3119 4181 1.810030 CGCTACCTCGTTGCTTCCC 60.810 63.158 0.00 0.00 32.61 3.97
3120 4182 1.449778 GCTACCTCGTTGCTTCCCC 60.450 63.158 0.00 0.00 32.12 4.81
3121 4183 1.900545 GCTACCTCGTTGCTTCCCCT 61.901 60.000 0.00 0.00 32.12 4.79
3122 4184 1.481871 CTACCTCGTTGCTTCCCCTA 58.518 55.000 0.00 0.00 0.00 3.53
3123 4185 1.136500 CTACCTCGTTGCTTCCCCTAC 59.864 57.143 0.00 0.00 0.00 3.18
3124 4186 1.221021 CCTCGTTGCTTCCCCTACC 59.779 63.158 0.00 0.00 0.00 3.18
3125 4187 1.221021 CTCGTTGCTTCCCCTACCC 59.779 63.158 0.00 0.00 0.00 3.69
3126 4188 2.253403 CTCGTTGCTTCCCCTACCCC 62.253 65.000 0.00 0.00 0.00 4.95
3127 4189 2.681591 GTTGCTTCCCCTACCCCC 59.318 66.667 0.00 0.00 0.00 5.40
3153 4497 1.115467 CCTTCTGCCCACTATCGAGT 58.885 55.000 0.00 0.00 35.80 4.18
3200 4544 1.862602 AATCAAGGTGAAACGCCGCC 61.863 55.000 0.00 0.00 39.30 6.13
3229 4573 3.193903 TCCATTGTTGACTCGTCGGATTA 59.806 43.478 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.250124 AGTTCATCGCCACCAACGAA 60.250 50.000 0.00 0.00 43.71 3.85
1 2 0.250124 AAGTTCATCGCCACCAACGA 60.250 50.000 0.00 0.00 44.75 3.85
2 3 0.165944 GAAGTTCATCGCCACCAACG 59.834 55.000 0.00 0.00 0.00 4.10
3 4 1.234821 TGAAGTTCATCGCCACCAAC 58.765 50.000 0.08 0.00 0.00 3.77
4 5 1.879380 CTTGAAGTTCATCGCCACCAA 59.121 47.619 6.36 0.00 0.00 3.67
5 6 1.071542 TCTTGAAGTTCATCGCCACCA 59.928 47.619 6.36 0.00 0.00 4.17
6 7 1.808411 TCTTGAAGTTCATCGCCACC 58.192 50.000 6.36 0.00 0.00 4.61
7 8 2.096496 CCATCTTGAAGTTCATCGCCAC 59.904 50.000 6.36 0.00 0.00 5.01
8 9 2.027285 TCCATCTTGAAGTTCATCGCCA 60.027 45.455 6.36 0.00 0.00 5.69
9 10 2.352960 GTCCATCTTGAAGTTCATCGCC 59.647 50.000 6.36 0.00 0.00 5.54
10 11 3.265791 AGTCCATCTTGAAGTTCATCGC 58.734 45.455 6.36 0.00 0.00 4.58
11 12 3.549471 CGAGTCCATCTTGAAGTTCATCG 59.451 47.826 6.36 6.62 0.00 3.84
12 13 4.748892 TCGAGTCCATCTTGAAGTTCATC 58.251 43.478 6.36 0.00 33.98 2.92
13 14 4.808414 TCGAGTCCATCTTGAAGTTCAT 57.192 40.909 6.36 0.00 33.98 2.57
14 15 4.498241 CATCGAGTCCATCTTGAAGTTCA 58.502 43.478 0.08 0.08 39.69 3.18
15 16 3.868077 CCATCGAGTCCATCTTGAAGTTC 59.132 47.826 0.00 0.00 39.69 3.01
16 17 3.866651 CCATCGAGTCCATCTTGAAGTT 58.133 45.455 0.00 0.00 39.69 2.66
17 18 2.419297 GCCATCGAGTCCATCTTGAAGT 60.419 50.000 0.00 0.00 39.69 3.01
18 19 2.208431 GCCATCGAGTCCATCTTGAAG 58.792 52.381 0.00 0.00 39.69 3.02
19 20 1.471501 CGCCATCGAGTCCATCTTGAA 60.472 52.381 0.00 0.00 39.69 2.69
20 21 0.103026 CGCCATCGAGTCCATCTTGA 59.897 55.000 0.00 0.00 40.44 3.02
21 22 1.493950 GCGCCATCGAGTCCATCTTG 61.494 60.000 0.00 0.00 38.10 3.02
22 23 1.227380 GCGCCATCGAGTCCATCTT 60.227 57.895 0.00 0.00 38.10 2.40
23 24 2.419198 GCGCCATCGAGTCCATCT 59.581 61.111 0.00 0.00 38.10 2.90
24 25 3.032609 CGCGCCATCGAGTCCATC 61.033 66.667 0.00 0.00 38.10 3.51
25 26 4.592192 CCGCGCCATCGAGTCCAT 62.592 66.667 0.00 0.00 38.10 3.41
27 28 4.933064 CTCCGCGCCATCGAGTCC 62.933 72.222 0.00 0.00 38.10 3.85
28 29 4.194720 ACTCCGCGCCATCGAGTC 62.195 66.667 8.85 0.00 38.10 3.36
29 30 4.498520 CACTCCGCGCCATCGAGT 62.499 66.667 8.85 8.85 38.10 4.18
30 31 3.699955 TTCACTCCGCGCCATCGAG 62.700 63.158 0.00 3.86 38.10 4.04
31 32 3.699955 CTTCACTCCGCGCCATCGA 62.700 63.158 0.00 0.00 38.10 3.59
32 33 2.960957 ATCTTCACTCCGCGCCATCG 62.961 60.000 0.00 0.00 39.07 3.84
33 34 1.218230 GATCTTCACTCCGCGCCATC 61.218 60.000 0.00 0.00 0.00 3.51
34 35 1.227380 GATCTTCACTCCGCGCCAT 60.227 57.895 0.00 0.00 0.00 4.40
35 36 2.184322 GATCTTCACTCCGCGCCA 59.816 61.111 0.00 0.00 0.00 5.69
36 37 2.956964 CGATCTTCACTCCGCGCC 60.957 66.667 0.00 0.00 0.00 6.53
37 38 2.102357 TCGATCTTCACTCCGCGC 59.898 61.111 0.00 0.00 0.00 6.86
38 39 1.586564 GGTCGATCTTCACTCCGCG 60.587 63.158 0.00 0.00 0.00 6.46
39 40 0.108804 TTGGTCGATCTTCACTCCGC 60.109 55.000 0.00 0.00 0.00 5.54
40 41 1.472878 TCTTGGTCGATCTTCACTCCG 59.527 52.381 0.00 0.00 0.00 4.63
41 42 3.452474 CATCTTGGTCGATCTTCACTCC 58.548 50.000 0.00 0.00 0.00 3.85
42 43 3.452474 CCATCTTGGTCGATCTTCACTC 58.548 50.000 0.00 0.00 31.35 3.51
43 44 3.533606 CCATCTTGGTCGATCTTCACT 57.466 47.619 0.00 0.00 31.35 3.41
55 56 1.077501 ATGTCCGGCACCATCTTGG 60.078 57.895 0.00 0.00 45.02 3.61
56 57 1.378882 CCATGTCCGGCACCATCTTG 61.379 60.000 0.00 0.00 0.00 3.02
57 58 1.077501 CCATGTCCGGCACCATCTT 60.078 57.895 0.00 0.00 0.00 2.40
58 59 2.591753 CCATGTCCGGCACCATCT 59.408 61.111 0.00 0.00 0.00 2.90
59 60 2.516930 CCCATGTCCGGCACCATC 60.517 66.667 0.00 0.00 0.00 3.51
60 61 4.820744 GCCCATGTCCGGCACCAT 62.821 66.667 6.59 0.00 46.27 3.55
66 67 4.114997 GTTTGCGCCCATGTCCGG 62.115 66.667 4.18 0.00 0.00 5.14
67 68 2.141122 AAAGTTTGCGCCCATGTCCG 62.141 55.000 4.18 0.00 0.00 4.79
68 69 0.033366 AAAAGTTTGCGCCCATGTCC 59.967 50.000 4.18 0.00 0.00 4.02
69 70 1.139163 CAAAAGTTTGCGCCCATGTC 58.861 50.000 4.18 0.00 0.00 3.06
70 71 0.463620 ACAAAAGTTTGCGCCCATGT 59.536 45.000 4.18 0.00 41.79 3.21
71 72 2.327568 CTACAAAAGTTTGCGCCCATG 58.672 47.619 4.18 0.00 41.79 3.66
72 73 1.272212 CCTACAAAAGTTTGCGCCCAT 59.728 47.619 4.18 0.00 41.79 4.00
73 74 0.671251 CCTACAAAAGTTTGCGCCCA 59.329 50.000 4.18 0.00 41.79 5.36
74 75 0.038618 CCCTACAAAAGTTTGCGCCC 60.039 55.000 4.18 0.00 41.79 6.13
75 76 0.666274 GCCCTACAAAAGTTTGCGCC 60.666 55.000 4.18 0.00 41.79 6.53
76 77 0.666274 GGCCCTACAAAAGTTTGCGC 60.666 55.000 0.00 0.00 41.79 6.09
77 78 0.038618 GGGCCCTACAAAAGTTTGCG 60.039 55.000 17.04 0.00 41.79 4.85
78 79 1.272490 GAGGGCCCTACAAAAGTTTGC 59.728 52.381 28.78 3.05 41.79 3.68
79 80 2.876581 AGAGGGCCCTACAAAAGTTTG 58.123 47.619 28.78 2.22 43.62 2.93
80 81 3.612795 AAGAGGGCCCTACAAAAGTTT 57.387 42.857 28.78 6.37 0.00 2.66
81 82 3.612795 AAAGAGGGCCCTACAAAAGTT 57.387 42.857 28.78 8.24 0.00 2.66
82 83 3.230976 CAAAAGAGGGCCCTACAAAAGT 58.769 45.455 28.78 0.00 0.00 2.66
83 84 2.029020 GCAAAAGAGGGCCCTACAAAAG 60.029 50.000 28.78 14.71 0.00 2.27
84 85 1.967779 GCAAAAGAGGGCCCTACAAAA 59.032 47.619 28.78 0.00 0.00 2.44
85 86 1.627864 GCAAAAGAGGGCCCTACAAA 58.372 50.000 28.78 0.00 0.00 2.83
86 87 0.608035 CGCAAAAGAGGGCCCTACAA 60.608 55.000 28.78 0.00 0.00 2.41
87 88 1.002624 CGCAAAAGAGGGCCCTACA 60.003 57.895 28.78 0.00 0.00 2.74
88 89 0.608308 AACGCAAAAGAGGGCCCTAC 60.608 55.000 28.78 18.70 0.00 3.18
89 90 0.111639 AAACGCAAAAGAGGGCCCTA 59.888 50.000 28.78 0.00 0.00 3.53
90 91 1.152546 AAACGCAAAAGAGGGCCCT 60.153 52.632 29.18 29.18 0.00 5.19
91 92 1.006220 CAAACGCAAAAGAGGGCCC 60.006 57.895 16.46 16.46 0.00 5.80
92 93 0.318699 GACAAACGCAAAAGAGGGCC 60.319 55.000 0.00 0.00 0.00 5.80
93 94 0.660300 CGACAAACGCAAAAGAGGGC 60.660 55.000 0.00 0.00 34.51 5.19
94 95 0.661020 ACGACAAACGCAAAAGAGGG 59.339 50.000 0.00 0.00 46.94 4.30
95 96 3.806316 ATACGACAAACGCAAAAGAGG 57.194 42.857 0.00 0.00 46.94 3.69
96 97 4.768145 TCAATACGACAAACGCAAAAGAG 58.232 39.130 0.00 0.00 46.94 2.85
97 98 4.797693 TCAATACGACAAACGCAAAAGA 57.202 36.364 0.00 0.00 46.94 2.52
98 99 4.967575 AGTTCAATACGACAAACGCAAAAG 59.032 37.500 0.00 0.00 46.94 2.27
99 100 4.911053 AGTTCAATACGACAAACGCAAAA 58.089 34.783 0.00 0.00 46.94 2.44
100 101 4.539509 AGTTCAATACGACAAACGCAAA 57.460 36.364 0.00 0.00 46.94 3.68
101 102 4.275662 CAAGTTCAATACGACAAACGCAA 58.724 39.130 0.00 0.00 46.94 4.85
102 103 3.303461 CCAAGTTCAATACGACAAACGCA 60.303 43.478 0.00 0.00 46.94 5.24
103 104 3.223157 CCAAGTTCAATACGACAAACGC 58.777 45.455 0.00 0.00 46.94 4.84
105 106 4.483476 AGCCAAGTTCAATACGACAAAC 57.517 40.909 0.00 0.00 0.00 2.93
106 107 5.508200 AAAGCCAAGTTCAATACGACAAA 57.492 34.783 0.00 0.00 0.00 2.83
107 108 5.508200 AAAAGCCAAGTTCAATACGACAA 57.492 34.783 0.00 0.00 0.00 3.18
108 109 6.811253 ATAAAAGCCAAGTTCAATACGACA 57.189 33.333 0.00 0.00 0.00 4.35
109 110 9.058424 GTAAATAAAAGCCAAGTTCAATACGAC 57.942 33.333 0.00 0.00 0.00 4.34
110 111 7.958567 CGTAAATAAAAGCCAAGTTCAATACGA 59.041 33.333 0.00 0.00 33.71 3.43
111 112 7.253190 GCGTAAATAAAAGCCAAGTTCAATACG 60.253 37.037 0.00 0.00 34.65 3.06
112 113 7.539366 TGCGTAAATAAAAGCCAAGTTCAATAC 59.461 33.333 0.00 0.00 0.00 1.89
113 114 7.594714 TGCGTAAATAAAAGCCAAGTTCAATA 58.405 30.769 0.00 0.00 0.00 1.90
114 115 6.451393 TGCGTAAATAAAAGCCAAGTTCAAT 58.549 32.000 0.00 0.00 0.00 2.57
115 116 5.833082 TGCGTAAATAAAAGCCAAGTTCAA 58.167 33.333 0.00 0.00 0.00 2.69
116 117 5.440234 TGCGTAAATAAAAGCCAAGTTCA 57.560 34.783 0.00 0.00 0.00 3.18
117 118 8.455598 TTTATGCGTAAATAAAAGCCAAGTTC 57.544 30.769 7.03 0.00 30.83 3.01
118 119 8.705134 GTTTTATGCGTAAATAAAAGCCAAGTT 58.295 29.630 11.80 0.00 40.75 2.66
119 120 8.085909 AGTTTTATGCGTAAATAAAAGCCAAGT 58.914 29.630 11.80 0.00 40.75 3.16
120 121 8.372521 CAGTTTTATGCGTAAATAAAAGCCAAG 58.627 33.333 11.80 0.00 40.75 3.61
121 122 7.868415 ACAGTTTTATGCGTAAATAAAAGCCAA 59.132 29.630 11.80 0.00 40.75 4.52
122 123 7.327275 CACAGTTTTATGCGTAAATAAAAGCCA 59.673 33.333 11.80 0.00 40.75 4.75
123 124 7.327518 ACACAGTTTTATGCGTAAATAAAAGCC 59.672 33.333 11.80 0.00 40.75 4.35
124 125 8.222984 ACACAGTTTTATGCGTAAATAAAAGC 57.777 30.769 11.80 0.00 40.75 3.51
129 130 9.976255 GACATAACACAGTTTTATGCGTAAATA 57.024 29.630 16.33 0.74 39.57 1.40
130 131 7.690637 CGACATAACACAGTTTTATGCGTAAAT 59.309 33.333 16.33 0.00 39.57 1.40
131 132 7.010606 CGACATAACACAGTTTTATGCGTAAA 58.989 34.615 16.33 7.03 39.57 2.01
132 133 6.145858 ACGACATAACACAGTTTTATGCGTAA 59.854 34.615 24.57 0.00 41.87 3.18
133 134 5.634439 ACGACATAACACAGTTTTATGCGTA 59.366 36.000 24.57 0.00 41.87 4.42
134 135 4.449743 ACGACATAACACAGTTTTATGCGT 59.550 37.500 22.46 22.46 40.59 5.24
135 136 4.953269 ACGACATAACACAGTTTTATGCG 58.047 39.130 21.66 21.66 39.57 4.73
136 137 6.853872 TCAAACGACATAACACAGTTTTATGC 59.146 34.615 16.33 10.04 39.57 3.14
137 138 8.775220 TTCAAACGACATAACACAGTTTTATG 57.225 30.769 15.23 15.23 41.06 1.90
138 139 9.959749 AATTCAAACGACATAACACAGTTTTAT 57.040 25.926 0.00 0.00 33.38 1.40
139 140 9.790389 AAATTCAAACGACATAACACAGTTTTA 57.210 25.926 0.00 0.00 33.38 1.52
140 141 8.591312 CAAATTCAAACGACATAACACAGTTTT 58.409 29.630 0.00 0.00 33.38 2.43
141 142 7.971168 TCAAATTCAAACGACATAACACAGTTT 59.029 29.630 0.00 0.00 35.68 2.66
142 143 7.476667 TCAAATTCAAACGACATAACACAGTT 58.523 30.769 0.00 0.00 0.00 3.16
143 144 7.022055 TCAAATTCAAACGACATAACACAGT 57.978 32.000 0.00 0.00 0.00 3.55
144 145 7.643764 AGTTCAAATTCAAACGACATAACACAG 59.356 33.333 0.00 0.00 0.00 3.66
145 146 7.476667 AGTTCAAATTCAAACGACATAACACA 58.523 30.769 0.00 0.00 0.00 3.72
146 147 7.908193 AGTTCAAATTCAAACGACATAACAC 57.092 32.000 0.00 0.00 0.00 3.32
151 152 9.528018 ACAAATAAGTTCAAATTCAAACGACAT 57.472 25.926 0.00 0.00 0.00 3.06
152 153 8.802856 CACAAATAAGTTCAAATTCAAACGACA 58.197 29.630 0.00 0.00 0.00 4.35
153 154 8.265998 CCACAAATAAGTTCAAATTCAAACGAC 58.734 33.333 0.00 0.00 0.00 4.34
154 155 8.191446 TCCACAAATAAGTTCAAATTCAAACGA 58.809 29.630 0.00 0.00 0.00 3.85
155 156 8.346476 TCCACAAATAAGTTCAAATTCAAACG 57.654 30.769 0.00 0.00 0.00 3.60
158 159 9.103861 GGTTTCCACAAATAAGTTCAAATTCAA 57.896 29.630 0.00 0.00 0.00 2.69
159 160 8.482128 AGGTTTCCACAAATAAGTTCAAATTCA 58.518 29.630 0.00 0.00 0.00 2.57
160 161 8.887036 AGGTTTCCACAAATAAGTTCAAATTC 57.113 30.769 0.00 0.00 0.00 2.17
162 163 9.927668 CATAGGTTTCCACAAATAAGTTCAAAT 57.072 29.630 0.00 0.00 0.00 2.32
163 164 8.919145 ACATAGGTTTCCACAAATAAGTTCAAA 58.081 29.630 0.00 0.00 0.00 2.69
164 165 8.472007 ACATAGGTTTCCACAAATAAGTTCAA 57.528 30.769 0.00 0.00 0.00 2.69
165 166 7.721842 TGACATAGGTTTCCACAAATAAGTTCA 59.278 33.333 0.00 0.00 0.00 3.18
166 167 8.106247 TGACATAGGTTTCCACAAATAAGTTC 57.894 34.615 0.00 0.00 0.00 3.01
167 168 8.472007 TTGACATAGGTTTCCACAAATAAGTT 57.528 30.769 0.00 0.00 0.00 2.66
168 169 8.650143 ATTGACATAGGTTTCCACAAATAAGT 57.350 30.769 0.00 0.00 0.00 2.24
169 170 9.357652 CAATTGACATAGGTTTCCACAAATAAG 57.642 33.333 0.00 0.00 0.00 1.73
170 171 7.816995 GCAATTGACATAGGTTTCCACAAATAA 59.183 33.333 10.34 0.00 0.00 1.40
171 172 7.319646 GCAATTGACATAGGTTTCCACAAATA 58.680 34.615 10.34 0.00 0.00 1.40
172 173 6.165577 GCAATTGACATAGGTTTCCACAAAT 58.834 36.000 10.34 0.00 0.00 2.32
173 174 5.537188 GCAATTGACATAGGTTTCCACAAA 58.463 37.500 10.34 0.00 0.00 2.83
174 175 4.320861 CGCAATTGACATAGGTTTCCACAA 60.321 41.667 10.34 0.00 0.00 3.33
175 176 3.190327 CGCAATTGACATAGGTTTCCACA 59.810 43.478 10.34 0.00 0.00 4.17
176 177 3.438781 TCGCAATTGACATAGGTTTCCAC 59.561 43.478 10.34 0.00 0.00 4.02
177 178 3.680490 TCGCAATTGACATAGGTTTCCA 58.320 40.909 10.34 0.00 0.00 3.53
178 179 3.938963 TCTCGCAATTGACATAGGTTTCC 59.061 43.478 10.34 0.00 0.00 3.13
179 180 5.545658 TTCTCGCAATTGACATAGGTTTC 57.454 39.130 10.34 0.00 0.00 2.78
180 181 6.324819 CAATTCTCGCAATTGACATAGGTTT 58.675 36.000 10.34 0.00 39.36 3.27
181 182 5.677091 GCAATTCTCGCAATTGACATAGGTT 60.677 40.000 18.59 0.00 39.36 3.50
182 183 4.201950 GCAATTCTCGCAATTGACATAGGT 60.202 41.667 18.59 0.00 39.36 3.08
183 184 4.285292 GCAATTCTCGCAATTGACATAGG 58.715 43.478 18.59 0.00 39.36 2.57
184 185 4.285292 GGCAATTCTCGCAATTGACATAG 58.715 43.478 18.59 0.14 43.40 2.23
185 186 3.242706 CGGCAATTCTCGCAATTGACATA 60.243 43.478 19.63 0.00 43.96 2.29
186 187 2.478370 CGGCAATTCTCGCAATTGACAT 60.478 45.455 19.63 0.00 43.96 3.06
187 188 1.135717 CGGCAATTCTCGCAATTGACA 60.136 47.619 19.63 0.00 43.96 3.58
188 189 1.135689 ACGGCAATTCTCGCAATTGAC 60.136 47.619 18.59 15.88 41.16 3.18
189 190 1.164411 ACGGCAATTCTCGCAATTGA 58.836 45.000 18.59 0.00 39.36 2.57
190 191 1.981254 AACGGCAATTCTCGCAATTG 58.019 45.000 12.79 12.79 39.84 2.32
191 192 2.723124 AAACGGCAATTCTCGCAATT 57.277 40.000 0.00 0.00 0.00 2.32
192 193 2.228822 AGAAAACGGCAATTCTCGCAAT 59.771 40.909 0.00 0.00 30.16 3.56
193 194 1.606668 AGAAAACGGCAATTCTCGCAA 59.393 42.857 0.00 0.00 30.16 4.85
194 195 1.234821 AGAAAACGGCAATTCTCGCA 58.765 45.000 0.00 0.00 30.16 5.10
195 196 2.770532 GTAGAAAACGGCAATTCTCGC 58.229 47.619 0.38 0.00 37.16 5.03
234 235 4.710167 GACCCCCAAACGGACCCG 62.710 72.222 6.94 6.94 46.03 5.28
235 236 3.254617 AGACCCCCAAACGGACCC 61.255 66.667 0.00 0.00 0.00 4.46
236 237 2.033602 CAGACCCCCAAACGGACC 59.966 66.667 0.00 0.00 0.00 4.46
237 238 2.671963 GCAGACCCCCAAACGGAC 60.672 66.667 0.00 0.00 0.00 4.79
238 239 2.478335 GATGCAGACCCCCAAACGGA 62.478 60.000 0.00 0.00 0.00 4.69
239 240 2.035626 ATGCAGACCCCCAAACGG 59.964 61.111 0.00 0.00 0.00 4.44
240 241 1.002134 AGATGCAGACCCCCAAACG 60.002 57.895 0.00 0.00 0.00 3.60
241 242 0.251341 ACAGATGCAGACCCCCAAAC 60.251 55.000 0.00 0.00 0.00 2.93
242 243 1.281867 CTACAGATGCAGACCCCCAAA 59.718 52.381 0.00 0.00 0.00 3.28
243 244 0.911769 CTACAGATGCAGACCCCCAA 59.088 55.000 0.00 0.00 0.00 4.12
244 245 1.626356 GCTACAGATGCAGACCCCCA 61.626 60.000 0.00 0.00 0.00 4.96
245 246 1.147153 GCTACAGATGCAGACCCCC 59.853 63.158 0.00 0.00 0.00 5.40
246 247 0.253044 TTGCTACAGATGCAGACCCC 59.747 55.000 0.00 0.00 41.71 4.95
247 248 1.373570 GTTGCTACAGATGCAGACCC 58.626 55.000 0.00 0.00 41.71 4.46
248 249 1.373570 GGTTGCTACAGATGCAGACC 58.626 55.000 0.00 0.00 41.71 3.85
249 250 1.373570 GGGTTGCTACAGATGCAGAC 58.626 55.000 0.00 0.00 41.71 3.51
250 251 0.108186 CGGGTTGCTACAGATGCAGA 60.108 55.000 0.00 0.00 41.71 4.26
251 252 0.108186 TCGGGTTGCTACAGATGCAG 60.108 55.000 0.00 0.00 41.71 4.41
252 253 0.108186 CTCGGGTTGCTACAGATGCA 60.108 55.000 0.00 0.00 38.80 3.96
253 254 1.432270 GCTCGGGTTGCTACAGATGC 61.432 60.000 0.00 2.26 0.00 3.91
254 255 0.811616 GGCTCGGGTTGCTACAGATG 60.812 60.000 0.00 0.00 0.00 2.90
255 256 1.264749 TGGCTCGGGTTGCTACAGAT 61.265 55.000 0.00 0.00 0.00 2.90
256 257 1.888436 CTGGCTCGGGTTGCTACAGA 61.888 60.000 0.00 0.00 0.00 3.41
257 258 1.448540 CTGGCTCGGGTTGCTACAG 60.449 63.158 0.00 0.00 0.00 2.74
258 259 2.167398 GACTGGCTCGGGTTGCTACA 62.167 60.000 0.00 0.00 0.00 2.74
259 260 1.448013 GACTGGCTCGGGTTGCTAC 60.448 63.158 0.00 0.00 0.00 3.58
260 261 2.656069 GGACTGGCTCGGGTTGCTA 61.656 63.158 0.00 0.00 0.00 3.49
261 262 4.021925 GGACTGGCTCGGGTTGCT 62.022 66.667 0.00 0.00 0.00 3.91
263 264 2.162338 TTACGGACTGGCTCGGGTTG 62.162 60.000 0.00 0.00 0.00 3.77
264 265 1.474332 TTTACGGACTGGCTCGGGTT 61.474 55.000 0.00 0.00 0.00 4.11
265 266 1.474332 TTTTACGGACTGGCTCGGGT 61.474 55.000 0.00 0.00 0.00 5.28
266 267 0.739813 CTTTTACGGACTGGCTCGGG 60.740 60.000 0.00 0.00 0.00 5.14
267 268 1.359459 GCTTTTACGGACTGGCTCGG 61.359 60.000 0.00 0.00 0.00 4.63
268 269 1.683790 CGCTTTTACGGACTGGCTCG 61.684 60.000 0.00 0.00 0.00 5.03
269 270 2.079049 CGCTTTTACGGACTGGCTC 58.921 57.895 0.00 0.00 0.00 4.70
270 271 4.278956 CGCTTTTACGGACTGGCT 57.721 55.556 0.00 0.00 0.00 4.75
278 279 3.891324 TCATGGAAAAACCGCTTTTACG 58.109 40.909 0.00 0.00 40.32 3.18
279 280 5.174943 CAGTTCATGGAAAAACCGCTTTTAC 59.825 40.000 0.00 0.00 42.61 2.01
280 281 5.163499 ACAGTTCATGGAAAAACCGCTTTTA 60.163 36.000 0.00 0.00 42.61 1.52
281 282 4.119136 CAGTTCATGGAAAAACCGCTTTT 58.881 39.130 0.00 0.00 42.61 2.27
282 283 3.132111 ACAGTTCATGGAAAAACCGCTTT 59.868 39.130 0.00 0.00 42.61 3.51
283 284 2.693074 ACAGTTCATGGAAAAACCGCTT 59.307 40.909 0.00 0.00 42.61 4.68
284 285 2.306847 ACAGTTCATGGAAAAACCGCT 58.693 42.857 0.00 0.00 42.61 5.52
285 286 2.793278 ACAGTTCATGGAAAAACCGC 57.207 45.000 0.00 0.00 42.61 5.68
286 287 4.673311 CGTTTACAGTTCATGGAAAAACCG 59.327 41.667 0.00 0.00 43.49 4.44
287 288 4.443063 GCGTTTACAGTTCATGGAAAAACC 59.557 41.667 0.00 0.00 43.49 3.27
288 289 4.145756 CGCGTTTACAGTTCATGGAAAAAC 59.854 41.667 0.00 0.00 43.49 2.43
289 290 4.201930 ACGCGTTTACAGTTCATGGAAAAA 60.202 37.500 5.58 0.00 43.49 1.94
290 291 3.312973 ACGCGTTTACAGTTCATGGAAAA 59.687 39.130 5.58 0.00 43.49 2.29
291 292 2.873472 ACGCGTTTACAGTTCATGGAAA 59.127 40.909 5.58 0.00 39.53 3.13
292 293 2.485903 ACGCGTTTACAGTTCATGGAA 58.514 42.857 5.58 0.00 0.00 3.53
293 294 2.157834 ACGCGTTTACAGTTCATGGA 57.842 45.000 5.58 0.00 0.00 3.41
294 295 2.961522 AACGCGTTTACAGTTCATGG 57.038 45.000 20.79 0.00 0.00 3.66
295 296 4.032355 ACAAAACGCGTTTACAGTTCATG 58.968 39.130 34.89 26.96 31.63 3.07
296 297 4.032355 CACAAAACGCGTTTACAGTTCAT 58.968 39.130 34.89 15.92 31.63 2.57
297 298 3.418094 CACAAAACGCGTTTACAGTTCA 58.582 40.909 34.89 0.00 31.63 3.18
298 299 2.779471 CCACAAAACGCGTTTACAGTTC 59.221 45.455 34.89 0.00 31.63 3.01
299 300 2.478200 CCCACAAAACGCGTTTACAGTT 60.478 45.455 34.89 18.15 31.63 3.16
300 301 1.064357 CCCACAAAACGCGTTTACAGT 59.936 47.619 34.89 28.13 31.63 3.55
301 302 1.749153 CCCACAAAACGCGTTTACAG 58.251 50.000 34.89 27.54 31.63 2.74
302 303 0.248539 GCCCACAAAACGCGTTTACA 60.249 50.000 34.89 0.00 31.63 2.41
303 304 0.935831 GGCCCACAAAACGCGTTTAC 60.936 55.000 34.89 19.67 31.63 2.01
304 305 1.359475 GGCCCACAAAACGCGTTTA 59.641 52.632 34.89 0.00 31.63 2.01
305 306 2.105328 GGCCCACAAAACGCGTTT 59.895 55.556 30.36 30.36 0.00 3.60
306 307 4.258932 CGGCCCACAAAACGCGTT 62.259 61.111 20.79 20.79 0.00 4.84
326 327 3.506059 CTAGCAGACCCCGCATCCG 62.506 68.421 0.00 0.00 0.00 4.18
327 328 2.093537 CTCTAGCAGACCCCGCATCC 62.094 65.000 0.00 0.00 0.00 3.51
328 329 1.109920 TCTCTAGCAGACCCCGCATC 61.110 60.000 0.00 0.00 0.00 3.91
329 330 0.470833 ATCTCTAGCAGACCCCGCAT 60.471 55.000 0.00 0.00 32.26 4.73
330 331 1.075970 ATCTCTAGCAGACCCCGCA 60.076 57.895 0.00 0.00 32.26 5.69
331 332 1.365633 CATCTCTAGCAGACCCCGC 59.634 63.158 0.00 0.00 32.26 6.13
332 333 1.112315 AGCATCTCTAGCAGACCCCG 61.112 60.000 0.00 0.00 32.26 5.73
333 334 0.678950 GAGCATCTCTAGCAGACCCC 59.321 60.000 0.00 0.00 32.26 4.95
344 345 6.889508 CGATCAGGTCGCTTAGAGCATCTC 62.890 54.167 0.00 0.00 43.13 2.75
349 350 3.171705 CGATCAGGTCGCTTAGAGC 57.828 57.895 0.00 0.00 44.33 4.09
358 359 3.172824 GACGTCTTTTCTCGATCAGGTC 58.827 50.000 8.70 0.00 0.00 3.85
359 360 2.557056 TGACGTCTTTTCTCGATCAGGT 59.443 45.455 17.92 0.00 0.00 4.00
360 361 2.917971 GTGACGTCTTTTCTCGATCAGG 59.082 50.000 17.92 0.00 0.00 3.86
361 362 3.565516 TGTGACGTCTTTTCTCGATCAG 58.434 45.455 17.92 0.00 0.00 2.90
362 363 3.636282 TGTGACGTCTTTTCTCGATCA 57.364 42.857 17.92 0.00 0.00 2.92
363 364 4.030753 GTGATGTGACGTCTTTTCTCGATC 59.969 45.833 17.92 6.87 0.00 3.69
364 365 3.921021 GTGATGTGACGTCTTTTCTCGAT 59.079 43.478 17.92 0.00 0.00 3.59
365 366 3.243267 TGTGATGTGACGTCTTTTCTCGA 60.243 43.478 17.92 0.00 0.00 4.04
366 367 3.049912 TGTGATGTGACGTCTTTTCTCG 58.950 45.455 17.92 0.00 0.00 4.04
367 368 3.430218 CCTGTGATGTGACGTCTTTTCTC 59.570 47.826 17.92 11.17 0.00 2.87
368 369 3.181465 ACCTGTGATGTGACGTCTTTTCT 60.181 43.478 17.92 0.00 0.00 2.52
369 370 3.131396 ACCTGTGATGTGACGTCTTTTC 58.869 45.455 17.92 10.68 0.00 2.29
370 371 3.194005 ACCTGTGATGTGACGTCTTTT 57.806 42.857 17.92 0.43 0.00 2.27
371 372 2.910688 ACCTGTGATGTGACGTCTTT 57.089 45.000 17.92 0.82 0.00 2.52
372 373 2.872245 CAAACCTGTGATGTGACGTCTT 59.128 45.455 17.92 1.22 0.00 3.01
373 374 2.483876 CAAACCTGTGATGTGACGTCT 58.516 47.619 17.92 0.00 0.00 4.18
374 375 1.069906 GCAAACCTGTGATGTGACGTC 60.070 52.381 9.11 9.11 0.00 4.34
375 376 0.944386 GCAAACCTGTGATGTGACGT 59.056 50.000 0.00 0.00 0.00 4.34
376 377 0.238289 GGCAAACCTGTGATGTGACG 59.762 55.000 0.00 0.00 0.00 4.35
377 378 0.598065 GGGCAAACCTGTGATGTGAC 59.402 55.000 0.00 0.00 35.85 3.67
378 379 0.184692 TGGGCAAACCTGTGATGTGA 59.815 50.000 0.00 0.00 41.11 3.58
379 380 1.039068 TTGGGCAAACCTGTGATGTG 58.961 50.000 0.00 0.00 41.11 3.21
380 381 1.412343 GTTTGGGCAAACCTGTGATGT 59.588 47.619 0.00 0.00 43.52 3.06
381 382 1.602668 CGTTTGGGCAAACCTGTGATG 60.603 52.381 0.00 0.00 45.78 3.07
382 383 0.673437 CGTTTGGGCAAACCTGTGAT 59.327 50.000 0.00 0.00 45.78 3.06
383 384 0.394488 TCGTTTGGGCAAACCTGTGA 60.394 50.000 0.00 0.00 45.78 3.58
384 385 0.457851 TTCGTTTGGGCAAACCTGTG 59.542 50.000 0.00 0.00 45.78 3.66
385 386 0.744281 CTTCGTTTGGGCAAACCTGT 59.256 50.000 0.00 0.00 45.78 4.00
386 387 0.597377 GCTTCGTTTGGGCAAACCTG 60.597 55.000 0.00 0.00 45.78 4.00
387 388 1.040339 TGCTTCGTTTGGGCAAACCT 61.040 50.000 0.00 0.00 45.78 3.50
388 389 0.033366 ATGCTTCGTTTGGGCAAACC 59.967 50.000 0.00 0.00 45.78 3.27
389 390 1.000274 AGATGCTTCGTTTGGGCAAAC 60.000 47.619 0.00 0.00 45.25 2.93
390 391 1.327303 AGATGCTTCGTTTGGGCAAA 58.673 45.000 0.00 0.00 39.46 3.68
391 392 1.269448 GAAGATGCTTCGTTTGGGCAA 59.731 47.619 0.00 0.00 39.46 4.52
392 393 0.881118 GAAGATGCTTCGTTTGGGCA 59.119 50.000 0.00 0.00 40.32 5.36
393 394 0.881118 TGAAGATGCTTCGTTTGGGC 59.119 50.000 0.00 0.00 0.00 5.36
394 395 1.135972 CGTGAAGATGCTTCGTTTGGG 60.136 52.381 0.00 0.00 0.00 4.12
395 396 1.798223 TCGTGAAGATGCTTCGTTTGG 59.202 47.619 0.00 0.00 0.00 3.28
396 397 2.718789 CGTCGTGAAGATGCTTCGTTTG 60.719 50.000 0.00 0.00 0.00 2.93
397 398 1.455786 CGTCGTGAAGATGCTTCGTTT 59.544 47.619 0.00 0.00 0.00 3.60
398 399 1.060713 CGTCGTGAAGATGCTTCGTT 58.939 50.000 0.00 0.00 0.00 3.85
399 400 2.725644 CGTCGTGAAGATGCTTCGT 58.274 52.632 0.00 0.00 0.00 3.85
405 406 2.200792 ATCTCTGCGTCGTGAAGATG 57.799 50.000 0.00 0.00 38.88 2.90
406 407 2.286477 CGTATCTCTGCGTCGTGAAGAT 60.286 50.000 9.33 9.33 0.00 2.40
407 408 1.062148 CGTATCTCTGCGTCGTGAAGA 59.938 52.381 0.00 0.00 0.00 2.87
408 409 1.202043 ACGTATCTCTGCGTCGTGAAG 60.202 52.381 0.00 0.00 39.67 3.02
409 410 0.800631 ACGTATCTCTGCGTCGTGAA 59.199 50.000 0.00 0.00 39.67 3.18
410 411 2.463592 ACGTATCTCTGCGTCGTGA 58.536 52.632 0.00 0.00 39.67 4.35
411 412 0.861866 CCACGTATCTCTGCGTCGTG 60.862 60.000 8.66 8.66 42.02 4.35
412 413 1.022982 TCCACGTATCTCTGCGTCGT 61.023 55.000 0.00 0.00 42.02 4.34
413 414 0.308068 ATCCACGTATCTCTGCGTCG 59.692 55.000 0.00 0.00 42.02 5.12
414 415 1.333931 TGATCCACGTATCTCTGCGTC 59.666 52.381 0.00 0.00 42.02 5.19
415 416 1.389555 TGATCCACGTATCTCTGCGT 58.610 50.000 0.00 0.00 44.92 5.24
416 417 2.713895 ATGATCCACGTATCTCTGCG 57.286 50.000 0.00 0.00 36.47 5.18
417 418 4.380023 GGAGTATGATCCACGTATCTCTGC 60.380 50.000 0.00 0.00 39.34 4.26
418 419 4.156922 GGGAGTATGATCCACGTATCTCTG 59.843 50.000 0.00 0.00 41.52 3.35
419 420 4.043561 AGGGAGTATGATCCACGTATCTCT 59.956 45.833 0.00 0.00 41.52 3.10
420 421 4.337145 AGGGAGTATGATCCACGTATCTC 58.663 47.826 0.00 0.00 41.52 2.75
421 422 4.337145 GAGGGAGTATGATCCACGTATCT 58.663 47.826 0.00 0.00 41.52 1.98
422 423 3.444388 GGAGGGAGTATGATCCACGTATC 59.556 52.174 0.00 0.00 41.52 2.24
423 424 3.432378 GGAGGGAGTATGATCCACGTAT 58.568 50.000 0.00 0.00 41.52 3.06
424 425 2.812983 CGGAGGGAGTATGATCCACGTA 60.813 54.545 0.00 0.00 41.52 3.57
425 426 1.705873 GGAGGGAGTATGATCCACGT 58.294 55.000 0.00 0.00 41.52 4.49
426 427 0.598562 CGGAGGGAGTATGATCCACG 59.401 60.000 0.00 0.00 41.52 4.94
427 428 1.705873 ACGGAGGGAGTATGATCCAC 58.294 55.000 0.00 0.00 41.52 4.02
428 429 2.317040 GAACGGAGGGAGTATGATCCA 58.683 52.381 0.00 0.00 41.52 3.41
429 430 1.619332 GGAACGGAGGGAGTATGATCC 59.381 57.143 0.00 0.00 38.76 3.36
455 456 2.225491 TGAAAAAGCATGGACGCACTAC 59.775 45.455 0.00 0.00 0.00 2.73
456 457 2.483877 CTGAAAAAGCATGGACGCACTA 59.516 45.455 0.00 0.00 0.00 2.74
457 458 1.267806 CTGAAAAAGCATGGACGCACT 59.732 47.619 0.00 0.00 0.00 4.40
458 459 1.266718 TCTGAAAAAGCATGGACGCAC 59.733 47.619 0.00 0.00 0.00 5.34
459 460 1.603456 TCTGAAAAAGCATGGACGCA 58.397 45.000 0.00 0.00 0.00 5.24
460 461 2.927553 ATCTGAAAAAGCATGGACGC 57.072 45.000 0.00 0.00 0.00 5.19
461 462 6.381801 ACTTAAATCTGAAAAAGCATGGACG 58.618 36.000 0.00 0.00 0.00 4.79
462 463 8.490355 CAAACTTAAATCTGAAAAAGCATGGAC 58.510 33.333 0.00 0.00 0.00 4.02
463 464 8.420222 TCAAACTTAAATCTGAAAAAGCATGGA 58.580 29.630 0.00 0.00 0.00 3.41
464 465 8.592105 TCAAACTTAAATCTGAAAAAGCATGG 57.408 30.769 0.00 0.00 0.00 3.66
466 467 9.428097 GGATCAAACTTAAATCTGAAAAAGCAT 57.572 29.630 0.00 0.00 0.00 3.79
467 468 8.641541 AGGATCAAACTTAAATCTGAAAAAGCA 58.358 29.630 0.00 0.00 0.00 3.91
505 506 9.520204 CGGAAGCAAAAACTATATCATTGAATT 57.480 29.630 0.00 0.00 0.00 2.17
506 507 8.686334 ACGGAAGCAAAAACTATATCATTGAAT 58.314 29.630 0.00 0.00 0.00 2.57
507 508 8.050778 ACGGAAGCAAAAACTATATCATTGAA 57.949 30.769 0.00 0.00 0.00 2.69
508 509 7.335673 TGACGGAAGCAAAAACTATATCATTGA 59.664 33.333 0.00 0.00 0.00 2.57
509 510 7.471721 TGACGGAAGCAAAAACTATATCATTG 58.528 34.615 0.00 0.00 0.00 2.82
510 511 7.624360 TGACGGAAGCAAAAACTATATCATT 57.376 32.000 0.00 0.00 0.00 2.57
511 512 6.238484 GCTGACGGAAGCAAAAACTATATCAT 60.238 38.462 6.72 0.00 43.01 2.45
512 513 5.064707 GCTGACGGAAGCAAAAACTATATCA 59.935 40.000 6.72 0.00 43.01 2.15
513 514 5.502606 GCTGACGGAAGCAAAAACTATATC 58.497 41.667 6.72 0.00 43.01 1.63
514 515 5.485662 GCTGACGGAAGCAAAAACTATAT 57.514 39.130 6.72 0.00 43.01 0.86
515 516 4.939509 GCTGACGGAAGCAAAAACTATA 57.060 40.909 6.72 0.00 43.01 1.31
516 517 3.831715 GCTGACGGAAGCAAAAACTAT 57.168 42.857 6.72 0.00 43.01 2.12
525 526 2.049063 ACGACTGCTGACGGAAGC 60.049 61.111 18.07 4.76 43.82 3.86
526 527 1.797933 CGACGACTGCTGACGGAAG 60.798 63.158 18.07 6.57 35.82 3.46
527 528 2.254350 CGACGACTGCTGACGGAA 59.746 61.111 18.07 0.00 35.82 4.30
528 529 2.667199 TCGACGACTGCTGACGGA 60.667 61.111 18.07 5.57 35.82 4.69
529 530 2.502080 GTCGACGACTGCTGACGG 60.502 66.667 20.52 3.45 35.82 4.79
530 531 2.865603 CGTCGACGACTGCTGACG 60.866 66.667 33.35 13.20 46.57 4.35
531 532 1.370172 AACGTCGACGACTGCTGAC 60.370 57.895 41.52 0.00 43.02 3.51
532 533 1.370051 CAACGTCGACGACTGCTGA 60.370 57.895 41.52 0.00 43.02 4.26
533 534 2.365068 CCAACGTCGACGACTGCTG 61.365 63.158 41.52 26.38 43.02 4.41
534 535 2.050351 CCAACGTCGACGACTGCT 60.050 61.111 41.52 18.59 43.02 4.24
535 536 0.661187 TAACCAACGTCGACGACTGC 60.661 55.000 41.52 0.91 43.02 4.40
536 537 1.757574 TTAACCAACGTCGACGACTG 58.242 50.000 41.52 32.86 43.02 3.51
537 538 2.712057 ATTAACCAACGTCGACGACT 57.288 45.000 41.52 25.52 43.02 4.18
538 539 3.776043 AAATTAACCAACGTCGACGAC 57.224 42.857 41.52 18.04 43.02 4.34
539 540 7.754069 ATTATAAATTAACCAACGTCGACGA 57.246 32.000 41.52 19.85 43.02 4.20
540 541 9.898806 TTAATTATAAATTAACCAACGTCGACG 57.101 29.630 34.58 34.58 46.33 5.12
562 563 9.834628 TCGTGCTTTTCGAGATTTAAAATTAAT 57.165 25.926 0.00 0.00 33.38 1.40
576 577 2.019951 GTCCGCTCGTGCTTTTCGA 61.020 57.895 7.97 0.00 36.97 3.71
577 578 2.022129 AGTCCGCTCGTGCTTTTCG 61.022 57.895 7.97 0.00 36.97 3.46
578 579 1.493311 CAGTCCGCTCGTGCTTTTC 59.507 57.895 7.97 0.00 36.97 2.29
579 580 1.961277 CCAGTCCGCTCGTGCTTTT 60.961 57.895 7.97 0.00 36.97 2.27
580 581 2.172483 ATCCAGTCCGCTCGTGCTTT 62.172 55.000 7.97 0.00 36.97 3.51
581 582 2.172483 AATCCAGTCCGCTCGTGCTT 62.172 55.000 7.97 0.00 36.97 3.91
582 583 1.320344 TAATCCAGTCCGCTCGTGCT 61.320 55.000 7.97 0.00 36.97 4.40
583 584 0.249489 ATAATCCAGTCCGCTCGTGC 60.249 55.000 0.00 0.00 0.00 5.34
584 585 1.491670 CATAATCCAGTCCGCTCGTG 58.508 55.000 0.00 0.00 0.00 4.35
585 586 0.389391 CCATAATCCAGTCCGCTCGT 59.611 55.000 0.00 0.00 0.00 4.18
586 587 0.673985 TCCATAATCCAGTCCGCTCG 59.326 55.000 0.00 0.00 0.00 5.03
587 588 2.484889 GTTCCATAATCCAGTCCGCTC 58.515 52.381 0.00 0.00 0.00 5.03
588 589 1.202533 CGTTCCATAATCCAGTCCGCT 60.203 52.381 0.00 0.00 0.00 5.52
589 590 1.217882 CGTTCCATAATCCAGTCCGC 58.782 55.000 0.00 0.00 0.00 5.54
590 591 1.411246 TCCGTTCCATAATCCAGTCCG 59.589 52.381 0.00 0.00 0.00 4.79
591 592 2.224305 CCTCCGTTCCATAATCCAGTCC 60.224 54.545 0.00 0.00 0.00 3.85
592 593 2.698797 TCCTCCGTTCCATAATCCAGTC 59.301 50.000 0.00 0.00 0.00 3.51
593 594 2.700897 CTCCTCCGTTCCATAATCCAGT 59.299 50.000 0.00 0.00 0.00 4.00
594 595 2.700897 ACTCCTCCGTTCCATAATCCAG 59.299 50.000 0.00 0.00 0.00 3.86
595 596 2.759355 ACTCCTCCGTTCCATAATCCA 58.241 47.619 0.00 0.00 0.00 3.41
596 597 3.006644 GGTACTCCTCCGTTCCATAATCC 59.993 52.174 0.00 0.00 0.00 3.01
597 598 3.640029 TGGTACTCCTCCGTTCCATAATC 59.360 47.826 0.00 0.00 30.61 1.75
598 599 3.649843 TGGTACTCCTCCGTTCCATAAT 58.350 45.455 0.00 0.00 30.61 1.28
599 600 3.104519 TGGTACTCCTCCGTTCCATAA 57.895 47.619 0.00 0.00 30.61 1.90
600 601 2.832643 TGGTACTCCTCCGTTCCATA 57.167 50.000 0.00 0.00 30.61 2.74
601 602 1.946984 TTGGTACTCCTCCGTTCCAT 58.053 50.000 0.00 0.00 34.84 3.41
602 603 1.719529 TTTGGTACTCCTCCGTTCCA 58.280 50.000 0.00 0.00 33.28 3.53
603 604 3.736126 CGTATTTGGTACTCCTCCGTTCC 60.736 52.174 0.00 0.00 34.23 3.62
604 605 3.442100 CGTATTTGGTACTCCTCCGTTC 58.558 50.000 0.00 0.00 34.23 3.95
605 606 2.167075 CCGTATTTGGTACTCCTCCGTT 59.833 50.000 0.00 0.00 34.23 4.44
606 607 1.753073 CCGTATTTGGTACTCCTCCGT 59.247 52.381 0.00 0.00 34.23 4.69
607 608 1.537562 GCCGTATTTGGTACTCCTCCG 60.538 57.143 0.00 0.00 34.23 4.63
608 609 1.761198 AGCCGTATTTGGTACTCCTCC 59.239 52.381 0.00 0.00 34.23 4.30
609 610 2.483188 CCAGCCGTATTTGGTACTCCTC 60.483 54.545 0.00 0.00 34.23 3.71
610 611 1.485066 CCAGCCGTATTTGGTACTCCT 59.515 52.381 0.00 0.00 34.23 3.69
611 612 1.474498 CCCAGCCGTATTTGGTACTCC 60.474 57.143 0.00 0.00 32.40 3.85
612 613 1.483415 TCCCAGCCGTATTTGGTACTC 59.517 52.381 0.00 0.00 32.40 2.59
613 614 1.208776 GTCCCAGCCGTATTTGGTACT 59.791 52.381 0.00 0.00 32.40 2.73
614 615 1.660167 GTCCCAGCCGTATTTGGTAC 58.340 55.000 0.00 0.00 32.40 3.34
615 616 0.176219 CGTCCCAGCCGTATTTGGTA 59.824 55.000 0.00 0.00 32.40 3.25
616 617 1.078708 CGTCCCAGCCGTATTTGGT 60.079 57.895 0.00 0.00 32.40 3.67
617 618 2.469516 GCGTCCCAGCCGTATTTGG 61.470 63.158 0.00 0.00 0.00 3.28
618 619 3.098555 GCGTCCCAGCCGTATTTG 58.901 61.111 0.00 0.00 0.00 2.32
638 639 1.291184 CGAGCCATGTCTGCGTTTCA 61.291 55.000 0.00 0.00 0.00 2.69
700 701 1.077501 ACAGTGTTGTGCTGCACCT 60.078 52.632 28.17 15.80 37.47 4.00
723 724 3.018149 GTCCAGTCCAGTAGATTCGTCT 58.982 50.000 0.00 0.00 0.00 4.18
730 731 5.163184 CCATAGTCTAGTCCAGTCCAGTAGA 60.163 48.000 0.00 0.00 0.00 2.59
822 837 2.833582 GAGGATCCGGGACAGCGA 60.834 66.667 5.98 0.00 0.00 4.93
824 839 4.593864 GCGAGGATCCGGGACAGC 62.594 72.222 5.98 3.39 0.00 4.40
830 845 0.893270 AGATCTCTGCGAGGATCCGG 60.893 60.000 5.98 0.00 39.12 5.14
869 884 1.662686 CCTGGGGAAGAGAAGAGGTT 58.337 55.000 0.00 0.00 0.00 3.50
914 929 4.517815 GCGCGGGGTCGGTTGATA 62.518 66.667 8.83 0.00 36.79 2.15
1023 1041 3.240134 GAACAGCGTCCCTGGCAGA 62.240 63.158 17.94 0.00 46.14 4.26
1346 1364 1.738099 CGGAGAAGGACGGCAACAG 60.738 63.158 0.00 0.00 0.00 3.16
1416 1446 8.655935 ACCAATTTTGAGGTATCTGAAGAATT 57.344 30.769 0.00 0.00 36.07 2.17
1429 1459 7.432869 TCACACAAATTCTACCAATTTTGAGG 58.567 34.615 0.00 0.00 0.00 3.86
1473 1505 3.515104 ACCAAATTTATGCCTCAGTTGGG 59.485 43.478 0.00 0.00 38.67 4.12
1483 1515 9.687717 CGAAATCAAACATTACCAAATTTATGC 57.312 29.630 0.00 0.00 0.00 3.14
1527 1562 5.841810 TGAAGGCAAAATGTGACCTTTAAG 58.158 37.500 0.00 0.00 41.19 1.85
1667 1723 9.825972 CAAGTAAAATCTATCTTTCTCGCAAAA 57.174 29.630 0.00 0.00 0.00 2.44
1669 1725 8.771920 TCAAGTAAAATCTATCTTTCTCGCAA 57.228 30.769 0.00 0.00 0.00 4.85
1670 1726 8.820933 CATCAAGTAAAATCTATCTTTCTCGCA 58.179 33.333 0.00 0.00 0.00 5.10
1671 1727 8.821894 ACATCAAGTAAAATCTATCTTTCTCGC 58.178 33.333 0.00 0.00 0.00 5.03
1678 1734 9.814899 CAGTGAGACATCAAGTAAAATCTATCT 57.185 33.333 0.00 0.00 37.14 1.98
1679 1735 8.547069 GCAGTGAGACATCAAGTAAAATCTATC 58.453 37.037 0.00 0.00 37.14 2.08
1680 1736 8.043113 TGCAGTGAGACATCAAGTAAAATCTAT 58.957 33.333 0.00 0.00 37.14 1.98
1681 1737 7.386059 TGCAGTGAGACATCAAGTAAAATCTA 58.614 34.615 0.00 0.00 37.14 1.98
1682 1738 6.233434 TGCAGTGAGACATCAAGTAAAATCT 58.767 36.000 0.00 0.00 37.14 2.40
1683 1739 6.486253 TGCAGTGAGACATCAAGTAAAATC 57.514 37.500 0.00 0.00 37.14 2.17
1684 1740 6.882610 TTGCAGTGAGACATCAAGTAAAAT 57.117 33.333 0.00 0.00 37.14 1.82
1685 1741 6.294120 CCATTGCAGTGAGACATCAAGTAAAA 60.294 38.462 11.31 0.00 37.14 1.52
1686 1742 5.181811 CCATTGCAGTGAGACATCAAGTAAA 59.818 40.000 11.31 0.00 37.14 2.01
1687 1743 4.696877 CCATTGCAGTGAGACATCAAGTAA 59.303 41.667 11.31 0.00 37.14 2.24
1688 1744 4.256110 CCATTGCAGTGAGACATCAAGTA 58.744 43.478 11.31 0.00 37.14 2.24
1689 1745 3.079578 CCATTGCAGTGAGACATCAAGT 58.920 45.455 11.31 0.00 37.14 3.16
1690 1746 2.159421 GCCATTGCAGTGAGACATCAAG 60.159 50.000 11.31 0.00 35.62 3.02
1691 1747 1.814394 GCCATTGCAGTGAGACATCAA 59.186 47.619 11.31 0.00 35.62 2.57
1692 1748 1.456296 GCCATTGCAGTGAGACATCA 58.544 50.000 11.31 0.00 37.47 3.07
1693 1749 0.376152 CGCCATTGCAGTGAGACATC 59.624 55.000 11.31 0.00 37.32 3.06
1694 1750 0.036105 TCGCCATTGCAGTGAGACAT 60.036 50.000 11.31 0.00 37.32 3.06
1695 1751 0.036105 ATCGCCATTGCAGTGAGACA 60.036 50.000 11.31 0.00 37.32 3.41
1696 1752 0.654683 GATCGCCATTGCAGTGAGAC 59.345 55.000 11.31 0.00 37.32 3.36
1697 1753 0.249955 TGATCGCCATTGCAGTGAGA 59.750 50.000 11.31 9.98 37.32 3.27
1795 1851 2.577593 GTGGCCGAGTGGTAGGAC 59.422 66.667 0.00 0.00 37.67 3.85
1817 1873 2.891307 TAGTACCCCTCCAGCCCTGC 62.891 65.000 0.00 0.00 0.00 4.85
1862 1918 3.859414 GGCGAGGATGCAGAGGCT 61.859 66.667 0.00 0.00 41.91 4.58
2265 2321 8.035165 ACAGAGCTACAGATATGTACTAATCG 57.965 38.462 0.00 0.00 33.84 3.34
2332 2405 7.165812 CACAATTGAAACAGCACTACTAACAAC 59.834 37.037 13.59 0.00 0.00 3.32
2402 2475 7.807977 TTTGATCCAGCTAGTATTTTCCATC 57.192 36.000 0.00 0.00 0.00 3.51
2469 2542 3.689858 GCTAGAACATCAGGAGAGGGAGA 60.690 52.174 0.00 0.00 0.00 3.71
2515 2618 6.034161 TGGAGAGCATGTATCACATATGAG 57.966 41.667 10.38 0.87 36.53 2.90
2516 2619 6.423776 TTGGAGAGCATGTATCACATATGA 57.576 37.500 10.38 0.00 36.53 2.15
2517 2620 6.035758 CGATTGGAGAGCATGTATCACATATG 59.964 42.308 0.00 0.00 36.53 1.78
2518 2621 6.104665 CGATTGGAGAGCATGTATCACATAT 58.895 40.000 0.00 0.00 36.53 1.78
2578 2681 3.157087 CAATTTGTACAGGAGCCCACTT 58.843 45.455 0.00 0.00 0.00 3.16
2580 2683 1.202348 GCAATTTGTACAGGAGCCCAC 59.798 52.381 0.00 0.00 0.00 4.61
2581 2684 1.075374 AGCAATTTGTACAGGAGCCCA 59.925 47.619 0.00 0.00 0.00 5.36
2582 2685 1.839424 AGCAATTTGTACAGGAGCCC 58.161 50.000 0.00 0.00 0.00 5.19
2780 3841 2.091278 ACAGTATGGCTAGGCTCAGGTA 60.091 50.000 18.18 0.00 43.62 3.08
2808 3869 4.931027 TGGTAGGAGTGAGTCTAGAACT 57.069 45.455 0.00 0.00 42.42 3.01
2809 3870 5.236911 CGTATGGTAGGAGTGAGTCTAGAAC 59.763 48.000 0.00 0.00 0.00 3.01
2810 3871 5.129980 TCGTATGGTAGGAGTGAGTCTAGAA 59.870 44.000 0.00 0.00 0.00 2.10
2814 3875 3.928005 TCGTATGGTAGGAGTGAGTCT 57.072 47.619 0.00 0.00 0.00 3.24
2878 3939 6.564557 AACCGGTTATAAGGGATCTGTTAA 57.435 37.500 20.78 0.00 0.00 2.01
2883 3944 5.085219 CCTCTAACCGGTTATAAGGGATCT 58.915 45.833 30.81 9.43 30.39 2.75
2935 3997 1.490910 GTAAGGGATTGGCTAGGTGCT 59.509 52.381 0.00 0.00 42.39 4.40
3006 4068 1.083489 TGATTTTTACTCAGCCGCCG 58.917 50.000 0.00 0.00 0.00 6.46
3022 4084 3.532155 GCGAGGGAGAGGCGTGAT 61.532 66.667 0.00 0.00 0.00 3.06
3040 4102 0.031414 TTGTAGGGGCTAGGGGAGAC 60.031 60.000 0.00 0.00 0.00 3.36
3043 4105 2.132686 GAATTTGTAGGGGCTAGGGGA 58.867 52.381 0.00 0.00 0.00 4.81
3096 4158 2.813908 CAACGAGGTAGCGGTGGC 60.814 66.667 0.00 0.00 44.76 5.01
3110 4172 2.681591 GGGGGTAGGGGAAGCAAC 59.318 66.667 0.00 0.00 0.00 4.17
3132 4194 1.227674 CGATAGTGGGCAGAAGGGC 60.228 63.158 0.00 0.00 42.44 5.19
3137 4199 1.306148 CGTACTCGATAGTGGGCAGA 58.694 55.000 0.00 0.00 39.71 4.26
3140 4202 1.596464 CGAACGTACTCGATAGTGGGC 60.596 57.143 3.56 0.00 41.44 5.36
3153 4497 2.269562 CAATGGGGGCCGAACGTA 59.730 61.111 0.00 0.00 0.00 3.57
3200 4544 0.670546 AGTCAACAATGGAGACGGCG 60.671 55.000 4.80 4.80 37.36 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.