Multiple sequence alignment - TraesCS2D01G466100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G466100 chr2D 100.000 3400 0 0 1 3400 571885482 571882083 0.000000e+00 6279.0
1 TraesCS2D01G466100 chr2D 97.297 74 2 0 3017 3090 268894293 268894366 3.560000e-25 126.0
2 TraesCS2D01G466100 chr2A 91.248 2148 96 28 780 2887 710365110 710363015 0.000000e+00 2841.0
3 TraesCS2D01G466100 chr2A 93.596 406 23 2 338 740 732561556 732561151 1.350000e-168 603.0
4 TraesCS2D01G466100 chr2A 91.155 407 32 3 338 740 672443086 672443492 1.780000e-152 549.0
5 TraesCS2D01G466100 chr2A 91.053 190 12 4 3089 3275 710360058 710359871 5.630000e-63 252.0
6 TraesCS2D01G466100 chr2A 96.923 130 4 0 2885 3014 710360644 710360515 5.710000e-53 219.0
7 TraesCS2D01G466100 chr2A 92.208 154 9 1 30 183 710365238 710365088 7.390000e-52 215.0
8 TraesCS2D01G466100 chr2A 92.126 127 9 1 3274 3400 710359834 710359709 9.690000e-41 178.0
9 TraesCS2D01G466100 chr2B 92.725 1897 91 16 780 2663 683760274 683758412 0.000000e+00 2695.0
10 TraesCS2D01G466100 chr2B 95.676 185 6 2 1 183 683760436 683760252 2.570000e-76 296.0
11 TraesCS2D01G466100 chr2B 95.977 174 7 0 3102 3275 683756920 683756747 2.000000e-72 283.0
12 TraesCS2D01G466100 chr2B 86.154 195 23 4 2706 2899 788800552 788800361 1.240000e-49 207.0
13 TraesCS2D01G466100 chr2B 88.976 127 12 2 3274 3400 683756710 683756586 4.540000e-34 156.0
14 TraesCS2D01G466100 chr5D 92.506 427 23 4 321 741 362192947 362192524 1.350000e-168 603.0
15 TraesCS2D01G466100 chr5D 81.888 519 70 18 1902 2408 399959904 399959398 1.890000e-112 416.0
16 TraesCS2D01G466100 chr5D 80.539 334 40 8 1256 1568 399960594 399960265 2.040000e-57 233.0
17 TraesCS2D01G466100 chr5D 86.066 122 17 0 1444 1565 563725264 563725385 7.660000e-27 132.0
18 TraesCS2D01G466100 chr5D 100.000 50 0 0 288 337 482558084 482558133 3.610000e-15 93.5
19 TraesCS2D01G466100 chr7D 93.750 400 22 3 338 735 596257333 596257731 6.280000e-167 597.0
20 TraesCS2D01G466100 chr7D 91.176 408 26 10 339 740 48707559 48707156 2.310000e-151 545.0
21 TraesCS2D01G466100 chr7D 96.000 75 3 0 3016 3090 301326609 301326535 4.610000e-24 122.0
22 TraesCS2D01G466100 chr7D 94.805 77 4 0 3014 3090 320290901 320290977 1.660000e-23 121.0
23 TraesCS2D01G466100 chr7A 91.787 414 26 7 338 743 727127070 727126657 1.370000e-158 569.0
24 TraesCS2D01G466100 chr7A 91.687 409 28 5 338 740 548333010 548333418 2.290000e-156 562.0
25 TraesCS2D01G466100 chr7A 91.505 412 27 5 336 740 85028773 85029183 8.240000e-156 560.0
26 TraesCS2D01G466100 chr1A 91.484 411 26 6 338 740 161668618 161668209 1.070000e-154 556.0
27 TraesCS2D01G466100 chr5A 80.000 725 101 28 1902 2606 505535053 505534353 2.360000e-136 496.0
28 TraesCS2D01G466100 chr5A 79.825 342 31 19 1256 1568 505535764 505535432 7.390000e-52 215.0
29 TraesCS2D01G466100 chr5B 80.093 643 81 31 1916 2531 479839576 479838954 5.210000e-118 435.0
30 TraesCS2D01G466100 chr5B 81.395 301 34 9 1286 1568 479840252 479839956 3.410000e-55 226.0
31 TraesCS2D01G466100 chr4A 82.500 280 42 7 2118 2392 46424207 46424484 4.380000e-59 239.0
32 TraesCS2D01G466100 chr4A 85.340 191 21 7 2710 2896 737018347 737018160 1.250000e-44 191.0
33 TraesCS2D01G466100 chr4D 82.014 278 41 9 2118 2389 418397667 418397393 9.490000e-56 228.0
34 TraesCS2D01G466100 chr4D 85.388 219 13 10 2710 2920 508348018 508348225 3.440000e-50 209.0
35 TraesCS2D01G466100 chr4D 97.222 72 2 0 3019 3090 482703444 482703515 4.610000e-24 122.0
36 TraesCS2D01G466100 chrUn 81.295 278 43 9 2118 2389 393374632 393374358 2.050000e-52 217.0
37 TraesCS2D01G466100 chrUn 85.238 210 19 7 2710 2918 108388245 108388047 4.450000e-49 206.0
38 TraesCS2D01G466100 chrUn 84.817 191 21 8 2710 2896 51379870 51379684 5.790000e-43 185.0
39 TraesCS2D01G466100 chr4B 81.295 278 43 9 2118 2389 514747292 514747018 2.050000e-52 217.0
40 TraesCS2D01G466100 chr4B 85.405 185 15 9 2710 2888 665817772 665817950 7.490000e-42 182.0
41 TraesCS2D01G466100 chr3B 85.915 213 16 10 2710 2920 445238919 445239119 7.390000e-52 215.0
42 TraesCS2D01G466100 chr3B 97.297 74 2 0 3017 3090 602297701 602297774 3.560000e-25 126.0
43 TraesCS2D01G466100 chr3D 85.782 211 15 8 2710 2920 346091836 346092031 3.440000e-50 209.0
44 TraesCS2D01G466100 chr3D 81.633 147 11 5 190 336 500308850 500308980 1.290000e-19 108.0
45 TraesCS2D01G466100 chr3A 97.297 74 2 0 3017 3090 598544622 598544695 3.560000e-25 126.0
46 TraesCS2D01G466100 chr6D 94.872 78 4 0 3013 3090 319689602 319689525 4.610000e-24 122.0
47 TraesCS2D01G466100 chr6D 85.135 74 3 3 2851 2924 142136695 142136760 6.090000e-08 69.4
48 TraesCS2D01G466100 chr1D 97.222 72 2 0 3019 3090 86918505 86918576 4.610000e-24 122.0
49 TraesCS2D01G466100 chr1D 93.827 81 4 1 3011 3090 194462610 194462690 1.660000e-23 121.0
50 TraesCS2D01G466100 chr1B 89.157 83 9 0 1028 1110 687803708 687803626 1.670000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G466100 chr2D 571882083 571885482 3399 True 6279.0 6279 100.0000 1 3400 1 chr2D.!!$R1 3399
1 TraesCS2D01G466100 chr2A 710359709 710365238 5529 True 741.0 2841 92.7116 30 3400 5 chr2A.!!$R2 3370
2 TraesCS2D01G466100 chr2B 683756586 683760436 3850 True 857.5 2695 93.3385 1 3400 4 chr2B.!!$R2 3399
3 TraesCS2D01G466100 chr5D 399959398 399960594 1196 True 324.5 416 81.2135 1256 2408 2 chr5D.!!$R2 1152
4 TraesCS2D01G466100 chr5A 505534353 505535764 1411 True 355.5 496 79.9125 1256 2606 2 chr5A.!!$R1 1350
5 TraesCS2D01G466100 chr5B 479838954 479840252 1298 True 330.5 435 80.7440 1286 2531 2 chr5B.!!$R1 1245

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
781 784 0.029567 TAAAAACTTGCCCGTGCGTG 59.97 50.0 0.0 0.0 41.78 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2589 2804 0.164647 GTCACACAAAGCTAGCGCAG 59.835 55.0 11.47 6.31 39.1 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 25 1.153369 GAGATAGCGCTGGGTTGCA 60.153 57.895 22.90 0.00 0.00 4.08
183 186 4.032900 GTGTACTTGGTGCATCTGAATACG 59.967 45.833 0.00 0.00 30.01 3.06
185 188 3.937814 ACTTGGTGCATCTGAATACGAA 58.062 40.909 0.00 0.00 0.00 3.85
186 189 4.323417 ACTTGGTGCATCTGAATACGAAA 58.677 39.130 0.00 0.00 0.00 3.46
188 191 5.415701 ACTTGGTGCATCTGAATACGAAAAT 59.584 36.000 0.00 0.00 0.00 1.82
189 192 5.895636 TGGTGCATCTGAATACGAAAATT 57.104 34.783 0.00 0.00 0.00 1.82
190 193 5.879237 TGGTGCATCTGAATACGAAAATTC 58.121 37.500 0.00 0.00 36.57 2.17
191 194 5.647658 TGGTGCATCTGAATACGAAAATTCT 59.352 36.000 0.00 0.00 36.90 2.40
192 195 6.821160 TGGTGCATCTGAATACGAAAATTCTA 59.179 34.615 0.00 0.00 36.90 2.10
193 196 7.011389 TGGTGCATCTGAATACGAAAATTCTAG 59.989 37.037 0.00 0.00 36.90 2.43
194 197 7.224753 GGTGCATCTGAATACGAAAATTCTAGA 59.775 37.037 0.00 0.00 36.90 2.43
195 198 8.272176 GTGCATCTGAATACGAAAATTCTAGAG 58.728 37.037 0.00 0.00 36.90 2.43
196 199 7.042456 TGCATCTGAATACGAAAATTCTAGAGC 60.042 37.037 0.00 7.62 36.90 4.09
197 200 7.042456 GCATCTGAATACGAAAATTCTAGAGCA 60.042 37.037 0.00 0.00 36.90 4.26
198 201 8.820933 CATCTGAATACGAAAATTCTAGAGCAA 58.179 33.333 0.00 0.00 36.90 3.91
199 202 8.186178 TCTGAATACGAAAATTCTAGAGCAAC 57.814 34.615 0.00 0.00 36.90 4.17
200 203 6.989437 TGAATACGAAAATTCTAGAGCAACG 58.011 36.000 0.00 0.17 36.90 4.10
201 204 5.968387 ATACGAAAATTCTAGAGCAACGG 57.032 39.130 0.00 0.00 0.00 4.44
202 205 3.000727 ACGAAAATTCTAGAGCAACGGG 58.999 45.455 0.00 0.00 0.00 5.28
203 206 2.351726 CGAAAATTCTAGAGCAACGGGG 59.648 50.000 0.00 0.00 0.00 5.73
204 207 3.344515 GAAAATTCTAGAGCAACGGGGT 58.655 45.455 0.00 0.00 0.00 4.95
205 208 4.510571 GAAAATTCTAGAGCAACGGGGTA 58.489 43.478 0.00 0.00 0.00 3.69
206 209 4.563140 AAATTCTAGAGCAACGGGGTAA 57.437 40.909 0.00 0.00 0.00 2.85
207 210 4.772886 AATTCTAGAGCAACGGGGTAAT 57.227 40.909 0.00 0.00 0.00 1.89
208 211 5.881923 AATTCTAGAGCAACGGGGTAATA 57.118 39.130 0.00 0.00 0.00 0.98
209 212 6.435292 AATTCTAGAGCAACGGGGTAATAT 57.565 37.500 0.00 0.00 0.00 1.28
210 213 4.866508 TCTAGAGCAACGGGGTAATATG 57.133 45.455 0.00 0.00 0.00 1.78
211 214 2.930826 AGAGCAACGGGGTAATATGG 57.069 50.000 0.00 0.00 0.00 2.74
212 215 2.404559 AGAGCAACGGGGTAATATGGA 58.595 47.619 0.00 0.00 0.00 3.41
213 216 2.368875 AGAGCAACGGGGTAATATGGAG 59.631 50.000 0.00 0.00 0.00 3.86
214 217 1.420138 AGCAACGGGGTAATATGGAGG 59.580 52.381 0.00 0.00 0.00 4.30
215 218 1.544759 GCAACGGGGTAATATGGAGGG 60.545 57.143 0.00 0.00 0.00 4.30
216 219 1.772453 CAACGGGGTAATATGGAGGGT 59.228 52.381 0.00 0.00 0.00 4.34
217 220 2.173996 CAACGGGGTAATATGGAGGGTT 59.826 50.000 0.00 0.00 0.00 4.11
218 221 2.495227 ACGGGGTAATATGGAGGGTTT 58.505 47.619 0.00 0.00 0.00 3.27
219 222 3.667693 ACGGGGTAATATGGAGGGTTTA 58.332 45.455 0.00 0.00 0.00 2.01
220 223 3.392285 ACGGGGTAATATGGAGGGTTTAC 59.608 47.826 0.00 0.00 0.00 2.01
221 224 3.555586 CGGGGTAATATGGAGGGTTTACG 60.556 52.174 0.00 0.00 0.00 3.18
222 225 3.244665 GGGGTAATATGGAGGGTTTACGG 60.245 52.174 0.00 0.00 0.00 4.02
223 226 3.244665 GGGTAATATGGAGGGTTTACGGG 60.245 52.174 0.00 0.00 0.00 5.28
224 227 3.647590 GGTAATATGGAGGGTTTACGGGA 59.352 47.826 0.00 0.00 0.00 5.14
225 228 4.287845 GGTAATATGGAGGGTTTACGGGAT 59.712 45.833 0.00 0.00 0.00 3.85
226 229 4.635699 AATATGGAGGGTTTACGGGATC 57.364 45.455 0.00 0.00 0.00 3.36
227 230 2.191981 ATGGAGGGTTTACGGGATCT 57.808 50.000 0.00 0.00 0.00 2.75
228 231 1.492764 TGGAGGGTTTACGGGATCTC 58.507 55.000 0.00 0.00 0.00 2.75
229 232 1.007963 TGGAGGGTTTACGGGATCTCT 59.992 52.381 0.00 0.00 0.00 3.10
230 233 2.117051 GGAGGGTTTACGGGATCTCTT 58.883 52.381 0.00 0.00 0.00 2.85
231 234 3.303049 GGAGGGTTTACGGGATCTCTTA 58.697 50.000 0.00 0.00 0.00 2.10
232 235 3.708121 GGAGGGTTTACGGGATCTCTTAA 59.292 47.826 0.00 0.00 0.00 1.85
233 236 4.442612 GGAGGGTTTACGGGATCTCTTAAC 60.443 50.000 0.00 0.00 0.00 2.01
234 237 4.359996 AGGGTTTACGGGATCTCTTAACT 58.640 43.478 0.00 0.00 0.00 2.24
235 238 5.522641 AGGGTTTACGGGATCTCTTAACTA 58.477 41.667 0.00 0.00 0.00 2.24
236 239 5.960202 AGGGTTTACGGGATCTCTTAACTAA 59.040 40.000 0.00 0.00 0.00 2.24
237 240 6.045318 GGGTTTACGGGATCTCTTAACTAAC 58.955 44.000 0.00 0.00 0.00 2.34
238 241 6.127225 GGGTTTACGGGATCTCTTAACTAACT 60.127 42.308 0.00 0.00 0.00 2.24
239 242 7.068716 GGGTTTACGGGATCTCTTAACTAACTA 59.931 40.741 0.00 0.00 0.00 2.24
240 243 8.470002 GGTTTACGGGATCTCTTAACTAACTAA 58.530 37.037 0.00 0.00 0.00 2.24
241 244 9.860898 GTTTACGGGATCTCTTAACTAACTAAA 57.139 33.333 0.00 0.00 0.00 1.85
242 245 9.860898 TTTACGGGATCTCTTAACTAACTAAAC 57.139 33.333 0.00 0.00 0.00 2.01
243 246 6.871844 ACGGGATCTCTTAACTAACTAAACC 58.128 40.000 0.00 0.00 0.00 3.27
244 247 6.666980 ACGGGATCTCTTAACTAACTAAACCT 59.333 38.462 0.00 0.00 0.00 3.50
245 248 7.147932 ACGGGATCTCTTAACTAACTAAACCTC 60.148 40.741 0.00 0.00 0.00 3.85
246 249 7.147949 CGGGATCTCTTAACTAACTAAACCTCA 60.148 40.741 0.00 0.00 0.00 3.86
247 250 7.980662 GGGATCTCTTAACTAACTAAACCTCAC 59.019 40.741 0.00 0.00 0.00 3.51
248 251 8.529476 GGATCTCTTAACTAACTAAACCTCACA 58.471 37.037 0.00 0.00 0.00 3.58
249 252 9.356433 GATCTCTTAACTAACTAAACCTCACAC 57.644 37.037 0.00 0.00 0.00 3.82
250 253 7.664758 TCTCTTAACTAACTAAACCTCACACC 58.335 38.462 0.00 0.00 0.00 4.16
251 254 6.762333 TCTTAACTAACTAAACCTCACACCC 58.238 40.000 0.00 0.00 0.00 4.61
252 255 4.362470 AACTAACTAAACCTCACACCCC 57.638 45.455 0.00 0.00 0.00 4.95
253 256 2.641321 ACTAACTAAACCTCACACCCCC 59.359 50.000 0.00 0.00 0.00 5.40
254 257 1.829138 AACTAAACCTCACACCCCCT 58.171 50.000 0.00 0.00 0.00 4.79
255 258 1.359168 ACTAAACCTCACACCCCCTC 58.641 55.000 0.00 0.00 0.00 4.30
256 259 0.618981 CTAAACCTCACACCCCCTCC 59.381 60.000 0.00 0.00 0.00 4.30
257 260 0.843343 TAAACCTCACACCCCCTCCC 60.843 60.000 0.00 0.00 0.00 4.30
258 261 4.677151 ACCTCACACCCCCTCCCC 62.677 72.222 0.00 0.00 0.00 4.81
281 284 3.196648 CCCCCGCGATTTTCAAGG 58.803 61.111 8.23 0.00 0.00 3.61
282 285 2.414785 CCCCCGCGATTTTCAAGGG 61.415 63.158 8.23 6.78 41.68 3.95
283 286 3.196648 CCCGCGATTTTCAAGGGG 58.803 61.111 8.23 0.00 38.44 4.79
284 287 1.677633 CCCGCGATTTTCAAGGGGT 60.678 57.895 8.23 0.00 38.44 4.95
285 288 1.506262 CCGCGATTTTCAAGGGGTG 59.494 57.895 8.23 0.00 33.88 4.61
286 289 1.241315 CCGCGATTTTCAAGGGGTGT 61.241 55.000 8.23 0.00 33.88 4.16
287 290 0.109781 CGCGATTTTCAAGGGGTGTG 60.110 55.000 0.00 0.00 0.00 3.82
288 291 0.243636 GCGATTTTCAAGGGGTGTGG 59.756 55.000 0.00 0.00 0.00 4.17
289 292 0.887933 CGATTTTCAAGGGGTGTGGG 59.112 55.000 0.00 0.00 0.00 4.61
290 293 0.608130 GATTTTCAAGGGGTGTGGGC 59.392 55.000 0.00 0.00 0.00 5.36
291 294 0.835971 ATTTTCAAGGGGTGTGGGCC 60.836 55.000 0.00 0.00 0.00 5.80
303 306 3.289211 TGGGCCCTCCACTCCCTA 61.289 66.667 25.70 0.00 41.46 3.53
304 307 2.290745 GGGCCCTCCACTCCCTAT 59.709 66.667 17.04 0.00 37.08 2.57
305 308 1.386057 GGGCCCTCCACTCCCTATT 60.386 63.158 17.04 0.00 37.08 1.73
306 309 1.419720 GGGCCCTCCACTCCCTATTC 61.420 65.000 17.04 0.00 37.08 1.75
307 310 0.400670 GGCCCTCCACTCCCTATTCT 60.401 60.000 0.00 0.00 0.00 2.40
308 311 1.512735 GCCCTCCACTCCCTATTCTT 58.487 55.000 0.00 0.00 0.00 2.52
309 312 1.418264 GCCCTCCACTCCCTATTCTTC 59.582 57.143 0.00 0.00 0.00 2.87
310 313 2.050918 CCCTCCACTCCCTATTCTTCC 58.949 57.143 0.00 0.00 0.00 3.46
311 314 2.629639 CCCTCCACTCCCTATTCTTCCA 60.630 54.545 0.00 0.00 0.00 3.53
312 315 3.115390 CCTCCACTCCCTATTCTTCCAA 58.885 50.000 0.00 0.00 0.00 3.53
313 316 3.718956 CCTCCACTCCCTATTCTTCCAAT 59.281 47.826 0.00 0.00 0.00 3.16
314 317 4.202409 CCTCCACTCCCTATTCTTCCAATC 60.202 50.000 0.00 0.00 0.00 2.67
315 318 4.370776 TCCACTCCCTATTCTTCCAATCA 58.629 43.478 0.00 0.00 0.00 2.57
316 319 4.164221 TCCACTCCCTATTCTTCCAATCAC 59.836 45.833 0.00 0.00 0.00 3.06
317 320 4.164988 CCACTCCCTATTCTTCCAATCACT 59.835 45.833 0.00 0.00 0.00 3.41
318 321 5.339530 CCACTCCCTATTCTTCCAATCACTT 60.340 44.000 0.00 0.00 0.00 3.16
319 322 6.183347 CACTCCCTATTCTTCCAATCACTTT 58.817 40.000 0.00 0.00 0.00 2.66
320 323 7.338710 CACTCCCTATTCTTCCAATCACTTTA 58.661 38.462 0.00 0.00 0.00 1.85
321 324 7.995488 CACTCCCTATTCTTCCAATCACTTTAT 59.005 37.037 0.00 0.00 0.00 1.40
322 325 8.214364 ACTCCCTATTCTTCCAATCACTTTATC 58.786 37.037 0.00 0.00 0.00 1.75
323 326 7.518188 TCCCTATTCTTCCAATCACTTTATCC 58.482 38.462 0.00 0.00 0.00 2.59
324 327 6.717084 CCCTATTCTTCCAATCACTTTATCCC 59.283 42.308 0.00 0.00 0.00 3.85
325 328 7.290061 CCTATTCTTCCAATCACTTTATCCCA 58.710 38.462 0.00 0.00 0.00 4.37
326 329 7.229506 CCTATTCTTCCAATCACTTTATCCCAC 59.770 40.741 0.00 0.00 0.00 4.61
327 330 4.855340 TCTTCCAATCACTTTATCCCACC 58.145 43.478 0.00 0.00 0.00 4.61
328 331 4.540099 TCTTCCAATCACTTTATCCCACCT 59.460 41.667 0.00 0.00 0.00 4.00
329 332 5.729229 TCTTCCAATCACTTTATCCCACCTA 59.271 40.000 0.00 0.00 0.00 3.08
330 333 6.216662 TCTTCCAATCACTTTATCCCACCTAA 59.783 38.462 0.00 0.00 0.00 2.69
331 334 6.001449 TCCAATCACTTTATCCCACCTAAG 57.999 41.667 0.00 0.00 0.00 2.18
332 335 4.580580 CCAATCACTTTATCCCACCTAAGC 59.419 45.833 0.00 0.00 0.00 3.09
333 336 5.192927 CAATCACTTTATCCCACCTAAGCA 58.807 41.667 0.00 0.00 0.00 3.91
334 337 4.216411 TCACTTTATCCCACCTAAGCAC 57.784 45.455 0.00 0.00 0.00 4.40
335 338 3.054655 TCACTTTATCCCACCTAAGCACC 60.055 47.826 0.00 0.00 0.00 5.01
336 339 3.054361 CACTTTATCCCACCTAAGCACCT 60.054 47.826 0.00 0.00 0.00 4.00
337 340 3.054361 ACTTTATCCCACCTAAGCACCTG 60.054 47.826 0.00 0.00 0.00 4.00
338 341 1.507140 TATCCCACCTAAGCACCTGG 58.493 55.000 0.00 0.00 0.00 4.45
339 342 1.281925 ATCCCACCTAAGCACCTGGG 61.282 60.000 0.00 0.00 44.41 4.45
340 343 1.923395 CCCACCTAAGCACCTGGGA 60.923 63.158 0.00 0.00 45.74 4.37
341 344 1.497309 CCCACCTAAGCACCTGGGAA 61.497 60.000 0.00 0.00 45.74 3.97
342 345 0.404040 CCACCTAAGCACCTGGGAAA 59.596 55.000 0.00 0.00 0.00 3.13
343 346 1.005924 CCACCTAAGCACCTGGGAAAT 59.994 52.381 0.00 0.00 0.00 2.17
344 347 2.241176 CCACCTAAGCACCTGGGAAATA 59.759 50.000 0.00 0.00 0.00 1.40
345 348 3.279434 CACCTAAGCACCTGGGAAATAC 58.721 50.000 0.00 0.00 0.00 1.89
346 349 2.241430 ACCTAAGCACCTGGGAAATACC 59.759 50.000 0.00 0.00 38.08 2.73
358 361 2.289565 GGAAATACCCTTTGGCTCTCG 58.710 52.381 0.00 0.00 33.59 4.04
359 362 1.671328 GAAATACCCTTTGGCTCTCGC 59.329 52.381 0.00 0.00 33.59 5.03
360 363 0.618458 AATACCCTTTGGCTCTCGCA 59.382 50.000 0.00 0.00 38.10 5.10
361 364 0.839946 ATACCCTTTGGCTCTCGCAT 59.160 50.000 0.00 0.00 38.10 4.73
362 365 0.107703 TACCCTTTGGCTCTCGCATG 60.108 55.000 0.00 0.00 38.10 4.06
363 366 1.377725 CCCTTTGGCTCTCGCATGT 60.378 57.895 0.00 0.00 38.10 3.21
364 367 0.107703 CCCTTTGGCTCTCGCATGTA 60.108 55.000 0.00 0.00 38.10 2.29
365 368 1.475751 CCCTTTGGCTCTCGCATGTAT 60.476 52.381 0.00 0.00 38.10 2.29
366 369 2.224281 CCCTTTGGCTCTCGCATGTATA 60.224 50.000 0.00 0.00 38.10 1.47
367 370 3.557898 CCCTTTGGCTCTCGCATGTATAT 60.558 47.826 0.00 0.00 38.10 0.86
368 371 4.322725 CCCTTTGGCTCTCGCATGTATATA 60.323 45.833 0.00 0.00 38.10 0.86
369 372 4.627467 CCTTTGGCTCTCGCATGTATATAC 59.373 45.833 5.89 5.89 38.10 1.47
370 373 4.864704 TTGGCTCTCGCATGTATATACA 57.135 40.909 17.65 17.65 40.98 2.29
371 374 4.174411 TGGCTCTCGCATGTATATACAC 57.826 45.455 17.69 5.64 39.30 2.90
372 375 3.056821 TGGCTCTCGCATGTATATACACC 60.057 47.826 17.69 11.85 39.30 4.16
373 376 3.512680 GCTCTCGCATGTATATACACCC 58.487 50.000 17.69 10.44 39.30 4.61
374 377 3.193691 GCTCTCGCATGTATATACACCCT 59.806 47.826 17.69 0.00 39.30 4.34
375 378 4.398358 GCTCTCGCATGTATATACACCCTA 59.602 45.833 17.69 4.07 39.30 3.53
376 379 5.067936 GCTCTCGCATGTATATACACCCTAT 59.932 44.000 17.69 0.00 39.30 2.57
377 380 6.262496 GCTCTCGCATGTATATACACCCTATA 59.738 42.308 17.69 2.76 39.30 1.31
378 381 7.040340 GCTCTCGCATGTATATACACCCTATAT 60.040 40.741 17.69 0.00 39.30 0.86
379 382 8.166422 TCTCGCATGTATATACACCCTATATG 57.834 38.462 17.69 11.11 39.30 1.78
380 383 7.230712 TCTCGCATGTATATACACCCTATATGG 59.769 40.741 17.69 5.46 39.30 2.74
453 456 9.796120 TTTTGGATTAAACTTGACTTACTTGTG 57.204 29.630 0.00 0.00 0.00 3.33
454 457 6.966021 TGGATTAAACTTGACTTACTTGTGC 58.034 36.000 0.00 0.00 0.00 4.57
455 458 6.544197 TGGATTAAACTTGACTTACTTGTGCA 59.456 34.615 0.00 0.00 0.00 4.57
456 459 6.856426 GGATTAAACTTGACTTACTTGTGCAC 59.144 38.462 10.75 10.75 0.00 4.57
457 460 6.995511 TTAAACTTGACTTACTTGTGCACT 57.004 33.333 19.41 0.00 0.00 4.40
458 461 8.671384 ATTAAACTTGACTTACTTGTGCACTA 57.329 30.769 19.41 9.94 0.00 2.74
459 462 6.604735 AAACTTGACTTACTTGTGCACTAG 57.395 37.500 24.01 24.01 0.00 2.57
460 463 5.277857 ACTTGACTTACTTGTGCACTAGT 57.722 39.130 31.30 31.30 36.08 2.57
461 464 6.401047 ACTTGACTTACTTGTGCACTAGTA 57.599 37.500 29.40 29.40 34.09 1.82
462 465 6.994221 ACTTGACTTACTTGTGCACTAGTAT 58.006 36.000 32.04 22.50 34.98 2.12
463 466 8.118976 ACTTGACTTACTTGTGCACTAGTATA 57.881 34.615 32.04 23.15 34.98 1.47
464 467 8.750298 ACTTGACTTACTTGTGCACTAGTATAT 58.250 33.333 32.04 24.84 34.98 0.86
499 502 5.479716 AAAAACCTACGTTGACTTCACAG 57.520 39.130 0.00 0.00 30.72 3.66
500 503 2.150397 ACCTACGTTGACTTCACAGC 57.850 50.000 0.00 0.00 0.00 4.40
501 504 1.060713 CCTACGTTGACTTCACAGCG 58.939 55.000 0.00 0.00 46.51 5.18
502 505 1.335597 CCTACGTTGACTTCACAGCGA 60.336 52.381 11.22 0.00 44.63 4.93
503 506 2.390938 CTACGTTGACTTCACAGCGAA 58.609 47.619 11.22 0.00 44.63 4.70
504 507 1.647346 ACGTTGACTTCACAGCGAAA 58.353 45.000 11.22 0.00 44.63 3.46
505 508 2.004017 ACGTTGACTTCACAGCGAAAA 58.996 42.857 11.22 0.00 44.63 2.29
506 509 2.417239 ACGTTGACTTCACAGCGAAAAA 59.583 40.909 11.22 0.00 44.63 1.94
507 510 3.029074 CGTTGACTTCACAGCGAAAAAG 58.971 45.455 0.00 0.00 44.63 2.27
508 511 3.242284 CGTTGACTTCACAGCGAAAAAGA 60.242 43.478 0.00 0.00 44.63 2.52
509 512 3.944422 TGACTTCACAGCGAAAAAGAC 57.056 42.857 0.00 0.00 31.71 3.01
510 513 3.266636 TGACTTCACAGCGAAAAAGACA 58.733 40.909 0.00 0.00 31.71 3.41
511 514 3.687212 TGACTTCACAGCGAAAAAGACAA 59.313 39.130 0.00 0.00 31.71 3.18
512 515 4.155099 TGACTTCACAGCGAAAAAGACAAA 59.845 37.500 0.00 0.00 31.71 2.83
513 516 5.054390 ACTTCACAGCGAAAAAGACAAAA 57.946 34.783 0.00 0.00 31.71 2.44
514 517 5.650543 ACTTCACAGCGAAAAAGACAAAAT 58.349 33.333 0.00 0.00 31.71 1.82
515 518 6.099341 ACTTCACAGCGAAAAAGACAAAATT 58.901 32.000 0.00 0.00 31.71 1.82
516 519 6.589907 ACTTCACAGCGAAAAAGACAAAATTT 59.410 30.769 0.00 0.00 31.71 1.82
517 520 6.329838 TCACAGCGAAAAAGACAAAATTTG 57.670 33.333 3.89 3.89 0.00 2.32
518 521 7.411804 CTTCACAGCGAAAAAGACAAAATTTGT 60.412 33.333 11.55 11.55 38.94 2.83
519 522 6.367422 TCACAGCGAAAAAGACAAAATTTGTT 59.633 30.769 13.00 0.00 45.52 2.83
520 523 7.014702 CACAGCGAAAAAGACAAAATTTGTTT 58.985 30.769 13.00 4.33 45.52 2.83
521 524 7.006387 CACAGCGAAAAAGACAAAATTTGTTTG 59.994 33.333 13.00 1.97 45.52 2.93
522 525 6.020984 AGCGAAAAAGACAAAATTTGTTTGC 58.979 32.000 13.00 11.39 45.52 3.68
523 526 6.020984 GCGAAAAAGACAAAATTTGTTTGCT 58.979 32.000 13.00 2.91 45.52 3.91
524 527 7.064016 AGCGAAAAAGACAAAATTTGTTTGCTA 59.936 29.630 16.35 0.00 45.52 3.49
525 528 7.850492 GCGAAAAAGACAAAATTTGTTTGCTAT 59.150 29.630 13.00 0.00 45.52 2.97
526 529 9.701355 CGAAAAAGACAAAATTTGTTTGCTATT 57.299 25.926 13.00 5.13 45.52 1.73
544 547 8.777865 TTGCTATTATAGGTCACTATTCATGC 57.222 34.615 1.12 0.00 40.35 4.06
545 548 8.138928 TGCTATTATAGGTCACTATTCATGCT 57.861 34.615 1.12 0.00 40.35 3.79
546 549 9.255029 TGCTATTATAGGTCACTATTCATGCTA 57.745 33.333 1.12 0.00 40.35 3.49
553 556 7.559590 AGGTCACTATTCATGCTATTTTGAC 57.440 36.000 0.00 0.00 0.00 3.18
554 557 6.729187 GGTCACTATTCATGCTATTTTGACC 58.271 40.000 13.15 13.15 42.64 4.02
555 558 6.318648 GGTCACTATTCATGCTATTTTGACCA 59.681 38.462 19.20 0.00 46.48 4.02
556 559 7.148086 GGTCACTATTCATGCTATTTTGACCAA 60.148 37.037 19.20 0.00 46.48 3.67
557 560 8.243426 GTCACTATTCATGCTATTTTGACCAAA 58.757 33.333 0.00 0.00 0.00 3.28
558 561 8.801299 TCACTATTCATGCTATTTTGACCAAAA 58.199 29.630 9.94 9.94 43.48 2.44
559 562 9.421806 CACTATTCATGCTATTTTGACCAAAAA 57.578 29.630 11.34 0.00 42.71 1.94
564 567 8.674263 TCATGCTATTTTGACCAAAAATTTGT 57.326 26.923 11.34 0.00 44.41 2.83
565 568 8.772705 TCATGCTATTTTGACCAAAAATTTGTC 58.227 29.630 11.34 0.00 44.41 3.18
566 569 8.776470 CATGCTATTTTGACCAAAAATTTGTCT 58.224 29.630 11.34 0.00 44.41 3.41
567 570 8.729805 TGCTATTTTGACCAAAAATTTGTCTT 57.270 26.923 11.34 0.00 44.41 3.01
568 571 9.171877 TGCTATTTTGACCAAAAATTTGTCTTT 57.828 25.926 11.34 0.00 44.41 2.52
618 621 9.541143 TTTTCTTTTTGTGAAACTTTTCTCACT 57.459 25.926 6.07 0.00 42.06 3.41
686 689 9.911138 AAATTTTTGACTTTTTGTTGAATTGCT 57.089 22.222 0.00 0.00 0.00 3.91
726 729 5.204409 GGTACATATGTATCCACGAACCA 57.796 43.478 18.27 0.00 32.54 3.67
727 730 5.603596 GGTACATATGTATCCACGAACCAA 58.396 41.667 18.27 0.00 32.54 3.67
728 731 6.050432 GGTACATATGTATCCACGAACCAAA 58.950 40.000 18.27 0.00 32.54 3.28
729 732 6.539464 GGTACATATGTATCCACGAACCAAAA 59.461 38.462 18.27 0.00 32.54 2.44
730 733 6.677781 ACATATGTATCCACGAACCAAAAG 57.322 37.500 6.56 0.00 0.00 2.27
731 734 6.177610 ACATATGTATCCACGAACCAAAAGT 58.822 36.000 6.56 0.00 0.00 2.66
732 735 6.657541 ACATATGTATCCACGAACCAAAAGTT 59.342 34.615 6.56 0.00 43.07 2.66
740 743 3.863120 AACCAAAAGTTCCCCTCCC 57.137 52.632 0.00 0.00 30.99 4.30
741 744 1.241485 AACCAAAAGTTCCCCTCCCT 58.759 50.000 0.00 0.00 30.99 4.20
742 745 2.143231 ACCAAAAGTTCCCCTCCCTA 57.857 50.000 0.00 0.00 0.00 3.53
743 746 2.435104 ACCAAAAGTTCCCCTCCCTAA 58.565 47.619 0.00 0.00 0.00 2.69
744 747 2.378886 ACCAAAAGTTCCCCTCCCTAAG 59.621 50.000 0.00 0.00 0.00 2.18
745 748 2.447443 CAAAAGTTCCCCTCCCTAAGC 58.553 52.381 0.00 0.00 0.00 3.09
746 749 1.755200 AAAGTTCCCCTCCCTAAGCA 58.245 50.000 0.00 0.00 0.00 3.91
747 750 0.992695 AAGTTCCCCTCCCTAAGCAC 59.007 55.000 0.00 0.00 0.00 4.40
748 751 0.914902 AGTTCCCCTCCCTAAGCACC 60.915 60.000 0.00 0.00 0.00 5.01
749 752 0.914902 GTTCCCCTCCCTAAGCACCT 60.915 60.000 0.00 0.00 0.00 4.00
750 753 0.178843 TTCCCCTCCCTAAGCACCTT 60.179 55.000 0.00 0.00 0.00 3.50
751 754 0.620700 TCCCCTCCCTAAGCACCTTC 60.621 60.000 0.00 0.00 0.00 3.46
752 755 1.522569 CCCTCCCTAAGCACCTTCG 59.477 63.158 0.00 0.00 0.00 3.79
753 756 1.265454 CCCTCCCTAAGCACCTTCGT 61.265 60.000 0.00 0.00 0.00 3.85
754 757 1.481871 CCTCCCTAAGCACCTTCGTA 58.518 55.000 0.00 0.00 0.00 3.43
755 758 1.829222 CCTCCCTAAGCACCTTCGTAA 59.171 52.381 0.00 0.00 0.00 3.18
756 759 2.235402 CCTCCCTAAGCACCTTCGTAAA 59.765 50.000 0.00 0.00 0.00 2.01
757 760 3.522553 CTCCCTAAGCACCTTCGTAAAG 58.477 50.000 0.00 0.00 0.00 1.85
758 761 2.901839 TCCCTAAGCACCTTCGTAAAGT 59.098 45.455 0.00 0.00 0.00 2.66
759 762 3.056322 TCCCTAAGCACCTTCGTAAAGTC 60.056 47.826 0.00 0.00 0.00 3.01
760 763 3.306502 CCCTAAGCACCTTCGTAAAGTCA 60.307 47.826 0.00 0.00 0.00 3.41
761 764 3.927142 CCTAAGCACCTTCGTAAAGTCAG 59.073 47.826 0.00 0.00 0.00 3.51
762 765 3.470645 AAGCACCTTCGTAAAGTCAGT 57.529 42.857 0.00 0.00 0.00 3.41
763 766 4.595762 AAGCACCTTCGTAAAGTCAGTA 57.404 40.909 0.00 0.00 0.00 2.74
764 767 4.595762 AGCACCTTCGTAAAGTCAGTAA 57.404 40.909 0.00 0.00 0.00 2.24
765 768 4.952460 AGCACCTTCGTAAAGTCAGTAAA 58.048 39.130 0.00 0.00 0.00 2.01
766 769 5.362263 AGCACCTTCGTAAAGTCAGTAAAA 58.638 37.500 0.00 0.00 0.00 1.52
767 770 5.818857 AGCACCTTCGTAAAGTCAGTAAAAA 59.181 36.000 0.00 0.00 0.00 1.94
768 771 5.905733 GCACCTTCGTAAAGTCAGTAAAAAC 59.094 40.000 0.00 0.00 0.00 2.43
769 772 6.238293 GCACCTTCGTAAAGTCAGTAAAAACT 60.238 38.462 0.00 0.00 0.00 2.66
770 773 7.677982 GCACCTTCGTAAAGTCAGTAAAAACTT 60.678 37.037 0.00 0.00 37.32 2.66
771 774 7.638683 CACCTTCGTAAAGTCAGTAAAAACTTG 59.361 37.037 0.00 0.00 35.93 3.16
772 775 6.631636 CCTTCGTAAAGTCAGTAAAAACTTGC 59.368 38.462 0.00 0.00 35.93 4.01
773 776 6.051646 TCGTAAAGTCAGTAAAAACTTGCC 57.948 37.500 0.00 0.00 35.93 4.52
774 777 5.007921 TCGTAAAGTCAGTAAAAACTTGCCC 59.992 40.000 0.00 0.00 35.93 5.36
775 778 3.982576 AAGTCAGTAAAAACTTGCCCG 57.017 42.857 0.00 0.00 34.52 6.13
776 779 2.927028 AGTCAGTAAAAACTTGCCCGT 58.073 42.857 0.00 0.00 0.00 5.28
777 780 2.616842 AGTCAGTAAAAACTTGCCCGTG 59.383 45.455 0.00 0.00 0.00 4.94
778 781 1.335496 TCAGTAAAAACTTGCCCGTGC 59.665 47.619 0.00 0.00 38.26 5.34
779 782 0.309612 AGTAAAAACTTGCCCGTGCG 59.690 50.000 0.00 0.00 41.78 5.34
780 783 0.029700 GTAAAAACTTGCCCGTGCGT 59.970 50.000 0.00 0.00 41.78 5.24
781 784 0.029567 TAAAAACTTGCCCGTGCGTG 59.970 50.000 0.00 0.00 41.78 5.34
782 785 1.939769 AAAAACTTGCCCGTGCGTGT 61.940 50.000 0.00 0.00 41.78 4.49
783 786 1.096386 AAAACTTGCCCGTGCGTGTA 61.096 50.000 0.00 0.00 41.78 2.90
784 787 0.887387 AAACTTGCCCGTGCGTGTAT 60.887 50.000 0.00 0.00 41.78 2.29
785 788 1.296056 AACTTGCCCGTGCGTGTATC 61.296 55.000 0.00 0.00 41.78 2.24
786 789 1.739929 CTTGCCCGTGCGTGTATCA 60.740 57.895 0.00 0.00 41.78 2.15
787 790 1.078778 TTGCCCGTGCGTGTATCAT 60.079 52.632 0.00 0.00 41.78 2.45
788 791 0.675208 TTGCCCGTGCGTGTATCATT 60.675 50.000 0.00 0.00 41.78 2.57
789 792 1.351707 GCCCGTGCGTGTATCATTG 59.648 57.895 0.00 0.00 0.00 2.82
790 793 1.351707 CCCGTGCGTGTATCATTGC 59.648 57.895 0.00 0.00 0.00 3.56
791 794 1.089481 CCCGTGCGTGTATCATTGCT 61.089 55.000 0.00 0.00 0.00 3.91
792 795 0.301687 CCGTGCGTGTATCATTGCTC 59.698 55.000 0.00 0.00 0.00 4.26
793 796 0.998669 CGTGCGTGTATCATTGCTCA 59.001 50.000 0.00 0.00 0.00 4.26
794 797 1.594397 CGTGCGTGTATCATTGCTCAT 59.406 47.619 0.00 0.00 0.00 2.90
795 798 2.347939 CGTGCGTGTATCATTGCTCATC 60.348 50.000 0.00 0.00 0.00 2.92
796 799 2.868583 GTGCGTGTATCATTGCTCATCT 59.131 45.455 0.00 0.00 0.00 2.90
797 800 2.867975 TGCGTGTATCATTGCTCATCTG 59.132 45.455 0.00 0.00 0.00 2.90
798 801 3.126073 GCGTGTATCATTGCTCATCTGA 58.874 45.455 0.00 0.00 0.00 3.27
799 802 3.557185 GCGTGTATCATTGCTCATCTGAA 59.443 43.478 0.00 0.00 0.00 3.02
800 803 4.212847 GCGTGTATCATTGCTCATCTGAAT 59.787 41.667 0.00 0.00 0.00 2.57
801 804 5.406477 GCGTGTATCATTGCTCATCTGAATA 59.594 40.000 0.00 0.00 0.00 1.75
802 805 6.617317 GCGTGTATCATTGCTCATCTGAATAC 60.617 42.308 0.00 0.00 0.00 1.89
803 806 6.421801 CGTGTATCATTGCTCATCTGAATACA 59.578 38.462 0.00 0.00 0.00 2.29
804 807 7.042523 CGTGTATCATTGCTCATCTGAATACAA 60.043 37.037 0.00 0.00 0.00 2.41
805 808 8.066595 GTGTATCATTGCTCATCTGAATACAAC 58.933 37.037 0.00 0.00 0.00 3.32
806 809 6.630444 ATCATTGCTCATCTGAATACAACC 57.370 37.500 0.00 0.00 0.00 3.77
807 810 5.499313 TCATTGCTCATCTGAATACAACCA 58.501 37.500 0.00 0.00 0.00 3.67
808 811 5.945191 TCATTGCTCATCTGAATACAACCAA 59.055 36.000 0.00 0.00 0.00 3.67
809 812 5.627499 TTGCTCATCTGAATACAACCAAC 57.373 39.130 0.00 0.00 0.00 3.77
810 813 4.009675 TGCTCATCTGAATACAACCAACC 58.990 43.478 0.00 0.00 0.00 3.77
811 814 4.009675 GCTCATCTGAATACAACCAACCA 58.990 43.478 0.00 0.00 0.00 3.67
866 869 1.227383 GGGTCACATGACATCCCCC 59.773 63.158 13.77 1.84 46.47 5.40
903 911 1.608717 CCCTTCTCACTCCCCTGTCG 61.609 65.000 0.00 0.00 0.00 4.35
952 961 0.250513 AGAACTAGCCAAGGAAGCGG 59.749 55.000 0.00 0.00 34.64 5.52
983 992 1.408822 CCATTTCGGGAAAGGAGAGGG 60.409 57.143 7.33 0.00 34.35 4.30
1030 1039 2.355481 ACGTCGCAACCGTCTTCC 60.355 61.111 0.00 0.00 31.97 3.46
1031 1040 2.049433 CGTCGCAACCGTCTTCCT 60.049 61.111 0.00 0.00 35.54 3.36
1032 1041 2.372690 CGTCGCAACCGTCTTCCTG 61.373 63.158 0.00 0.00 35.54 3.86
1033 1042 2.027625 GTCGCAACCGTCTTCCTGG 61.028 63.158 0.00 0.00 35.54 4.45
1034 1043 2.204461 TCGCAACCGTCTTCCTGGA 61.204 57.895 0.00 0.00 35.54 3.86
1035 1044 1.738099 CGCAACCGTCTTCCTGGAG 60.738 63.158 0.00 0.00 0.00 3.86
1036 1045 1.671742 GCAACCGTCTTCCTGGAGA 59.328 57.895 0.00 0.00 0.00 3.71
1037 1046 0.250513 GCAACCGTCTTCCTGGAGAT 59.749 55.000 0.00 0.00 0.00 2.75
1038 1047 2.009042 GCAACCGTCTTCCTGGAGATG 61.009 57.143 0.00 2.80 33.40 2.90
1138 1179 2.095516 GCTTCTGTACCTTCTTGCTTGC 60.096 50.000 0.00 0.00 0.00 4.01
1185 1226 1.704628 TGGTTCAATCCTCTTGCCTCA 59.295 47.619 0.00 0.00 0.00 3.86
1232 1273 3.787634 CGGTTGCAAATCAAATCAGATCG 59.212 43.478 0.00 0.00 36.26 3.69
1239 1280 5.618798 GCAAATCAAATCAGATCGATTCGTC 59.381 40.000 5.89 3.54 43.83 4.20
1241 1282 6.522233 AATCAAATCAGATCGATTCGTCTG 57.478 37.500 21.97 21.97 43.83 3.51
1338 1379 0.963355 GCCGCATGTTTCCCCAACTA 60.963 55.000 0.00 0.00 36.21 2.24
1357 1398 4.899239 GGCCAGATCGCCGTCCAG 62.899 72.222 0.00 0.00 39.64 3.86
1588 1659 1.440893 CTCACCCTCAGCATCTCGG 59.559 63.158 0.00 0.00 0.00 4.63
1632 1709 1.558756 ACTCCAAGGATTCCTCTGCTG 59.441 52.381 5.48 0.18 30.89 4.41
1761 1877 2.586792 GAGCGGAGGAGCCATTGT 59.413 61.111 0.00 0.00 38.01 2.71
1791 1907 1.150536 AAAAGGAGCAGCAACGGGA 59.849 52.632 0.00 0.00 0.00 5.14
1898 2014 0.755686 TTGGCAAAACACCCATCACC 59.244 50.000 0.00 0.00 0.00 4.02
1944 2117 1.448922 GGAGTCGGAGGAGATGGACG 61.449 65.000 0.00 0.00 34.68 4.79
2221 2421 2.946762 GGTGAACCTGAAGCACGC 59.053 61.111 0.00 0.00 33.48 5.34
2408 2611 1.370437 CGCCAGCTGATATGCCTCT 59.630 57.895 17.39 0.00 0.00 3.69
2508 2718 9.754382 CAATATTAATATGCAGTTTGCTCCTTT 57.246 29.630 8.74 0.00 45.31 3.11
2514 2725 7.736447 ATATGCAGTTTGCTCCTTTATACTC 57.264 36.000 2.48 0.00 45.31 2.59
2528 2739 6.479001 TCCTTTATACTCTATGTTTCGCTTGC 59.521 38.462 0.00 0.00 0.00 4.01
2663 2880 7.804843 ATCTGAAAATGTGATCTCAATCTCC 57.195 36.000 0.90 0.00 32.75 3.71
2690 2907 2.034685 TCGATCAGGCCTATGTCTTTCG 59.965 50.000 3.98 6.85 33.01 3.46
2694 2911 4.015872 TCAGGCCTATGTCTTTCGTTTT 57.984 40.909 3.98 0.00 0.00 2.43
2697 2914 2.163613 GGCCTATGTCTTTCGTTTTGGG 59.836 50.000 0.00 0.00 0.00 4.12
2747 2979 9.887406 GGTGAACAGTAAATTCGAAAAAGAATA 57.113 29.630 0.00 0.00 39.69 1.75
2925 5532 8.693504 CACATGTTTTCAGCACAAACTATTTAG 58.306 33.333 0.00 0.00 35.50 1.85
3019 5626 7.736447 AAATTGTTTTCTTTGTGGTGTTTGA 57.264 28.000 0.00 0.00 0.00 2.69
3020 5627 7.736447 AATTGTTTTCTTTGTGGTGTTTGAA 57.264 28.000 0.00 0.00 0.00 2.69
3021 5628 6.777526 TTGTTTTCTTTGTGGTGTTTGAAG 57.222 33.333 0.00 0.00 0.00 3.02
3022 5629 5.233988 TGTTTTCTTTGTGGTGTTTGAAGG 58.766 37.500 0.00 0.00 0.00 3.46
3024 5631 2.383855 TCTTTGTGGTGTTTGAAGGGG 58.616 47.619 0.00 0.00 0.00 4.79
3025 5632 2.024846 TCTTTGTGGTGTTTGAAGGGGA 60.025 45.455 0.00 0.00 0.00 4.81
3026 5633 2.065899 TTGTGGTGTTTGAAGGGGAG 57.934 50.000 0.00 0.00 0.00 4.30
3028 5635 1.152830 TGGTGTTTGAAGGGGAGCC 59.847 57.895 0.00 0.00 0.00 4.70
3031 5638 0.961753 GTGTTTGAAGGGGAGCCTTG 59.038 55.000 0.00 0.00 0.00 3.61
3032 5639 0.178964 TGTTTGAAGGGGAGCCTTGG 60.179 55.000 0.00 0.00 0.00 3.61
3033 5640 1.228862 TTTGAAGGGGAGCCTTGGC 60.229 57.895 2.97 2.97 0.00 4.52
3034 5641 3.567579 TTGAAGGGGAGCCTTGGCG 62.568 63.158 5.95 0.00 0.00 5.69
3054 5661 3.668386 GCGGTAAAGCTGTTGCCT 58.332 55.556 11.70 0.00 40.80 4.75
3057 5664 0.951558 CGGTAAAGCTGTTGCCTTGT 59.048 50.000 11.70 0.00 40.80 3.16
3058 5665 1.334960 CGGTAAAGCTGTTGCCTTGTG 60.335 52.381 11.70 0.00 40.80 3.33
3059 5666 1.953686 GGTAAAGCTGTTGCCTTGTGA 59.046 47.619 7.98 0.00 40.80 3.58
3060 5667 2.287608 GGTAAAGCTGTTGCCTTGTGAC 60.288 50.000 7.98 0.00 40.80 3.67
3063 5670 0.178981 AGCTGTTGCCTTGTGACCAT 60.179 50.000 0.00 0.00 40.80 3.55
3064 5671 0.038892 GCTGTTGCCTTGTGACCATG 60.039 55.000 0.00 0.00 0.00 3.66
3065 5672 1.608055 CTGTTGCCTTGTGACCATGA 58.392 50.000 0.00 0.00 0.00 3.07
3067 5674 0.238289 GTTGCCTTGTGACCATGACG 59.762 55.000 0.00 0.00 0.00 4.35
3069 5676 0.602638 TGCCTTGTGACCATGACGTC 60.603 55.000 9.11 9.11 0.00 4.34
3070 5677 0.602638 GCCTTGTGACCATGACGTCA 60.603 55.000 22.48 22.48 40.44 4.35
3077 5684 1.005394 ACCATGACGTCACGGGTTC 60.005 57.895 31.89 0.00 34.41 3.62
3080 5687 0.665068 CATGACGTCACGGGTTCGAA 60.665 55.000 22.71 0.00 40.11 3.71
3081 5688 0.245539 ATGACGTCACGGGTTCGAAT 59.754 50.000 22.71 0.00 40.11 3.34
3082 5689 0.387622 TGACGTCACGGGTTCGAATC 60.388 55.000 15.76 0.00 40.11 2.52
3083 5690 1.074872 GACGTCACGGGTTCGAATCC 61.075 60.000 18.00 18.00 40.11 3.01
3084 5691 1.214589 CGTCACGGGTTCGAATCCT 59.785 57.895 24.58 9.52 40.11 3.24
3085 5692 1.076533 CGTCACGGGTTCGAATCCTG 61.077 60.000 24.58 21.00 40.11 3.86
3086 5693 0.739813 GTCACGGGTTCGAATCCTGG 60.740 60.000 24.58 16.04 40.11 4.45
3087 5694 0.901114 TCACGGGTTCGAATCCTGGA 60.901 55.000 24.58 17.99 40.11 3.86
3232 6994 8.242053 ACTTGTGAATCAACATCAGAATTGATC 58.758 33.333 11.80 7.80 43.21 2.92
3299 7099 2.158623 TGGAAGAATGCCTGTTGACTGT 60.159 45.455 0.00 0.00 31.46 3.55
3342 7142 3.017442 GTCCATTTCTTAACTCCTGCCC 58.983 50.000 0.00 0.00 0.00 5.36
3343 7143 2.017049 CCATTTCTTAACTCCTGCCCG 58.983 52.381 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 43 9.014297 TCTCTCTTTCCAATTCCTATTTTGTTC 57.986 33.333 0.00 0.00 0.00 3.18
183 186 3.344515 ACCCCGTTGCTCTAGAATTTTC 58.655 45.455 0.00 0.00 0.00 2.29
185 188 4.563140 TTACCCCGTTGCTCTAGAATTT 57.437 40.909 0.00 0.00 0.00 1.82
186 189 4.772886 ATTACCCCGTTGCTCTAGAATT 57.227 40.909 0.00 0.00 0.00 2.17
188 191 4.039973 CCATATTACCCCGTTGCTCTAGAA 59.960 45.833 0.00 0.00 0.00 2.10
189 192 3.576982 CCATATTACCCCGTTGCTCTAGA 59.423 47.826 0.00 0.00 0.00 2.43
190 193 3.576982 TCCATATTACCCCGTTGCTCTAG 59.423 47.826 0.00 0.00 0.00 2.43
191 194 3.576982 CTCCATATTACCCCGTTGCTCTA 59.423 47.826 0.00 0.00 0.00 2.43
192 195 2.368875 CTCCATATTACCCCGTTGCTCT 59.631 50.000 0.00 0.00 0.00 4.09
193 196 2.550208 CCTCCATATTACCCCGTTGCTC 60.550 54.545 0.00 0.00 0.00 4.26
194 197 1.420138 CCTCCATATTACCCCGTTGCT 59.580 52.381 0.00 0.00 0.00 3.91
195 198 1.544759 CCCTCCATATTACCCCGTTGC 60.545 57.143 0.00 0.00 0.00 4.17
196 199 1.772453 ACCCTCCATATTACCCCGTTG 59.228 52.381 0.00 0.00 0.00 4.10
197 200 2.201523 ACCCTCCATATTACCCCGTT 57.798 50.000 0.00 0.00 0.00 4.44
198 201 2.201523 AACCCTCCATATTACCCCGT 57.798 50.000 0.00 0.00 0.00 5.28
199 202 3.555586 CGTAAACCCTCCATATTACCCCG 60.556 52.174 0.00 0.00 0.00 5.73
200 203 3.244665 CCGTAAACCCTCCATATTACCCC 60.245 52.174 0.00 0.00 0.00 4.95
201 204 3.244665 CCCGTAAACCCTCCATATTACCC 60.245 52.174 0.00 0.00 0.00 3.69
202 205 3.647590 TCCCGTAAACCCTCCATATTACC 59.352 47.826 0.00 0.00 0.00 2.85
203 206 4.961438 TCCCGTAAACCCTCCATATTAC 57.039 45.455 0.00 0.00 0.00 1.89
204 207 5.408824 AGATCCCGTAAACCCTCCATATTA 58.591 41.667 0.00 0.00 0.00 0.98
205 208 4.240323 AGATCCCGTAAACCCTCCATATT 58.760 43.478 0.00 0.00 0.00 1.28
206 209 3.838903 GAGATCCCGTAAACCCTCCATAT 59.161 47.826 0.00 0.00 0.00 1.78
207 210 3.116862 AGAGATCCCGTAAACCCTCCATA 60.117 47.826 0.00 0.00 0.00 2.74
208 211 2.047830 GAGATCCCGTAAACCCTCCAT 58.952 52.381 0.00 0.00 0.00 3.41
209 212 1.007963 AGAGATCCCGTAAACCCTCCA 59.992 52.381 0.00 0.00 0.00 3.86
210 213 1.790818 AGAGATCCCGTAAACCCTCC 58.209 55.000 0.00 0.00 0.00 4.30
211 214 4.405036 AGTTAAGAGATCCCGTAAACCCTC 59.595 45.833 0.00 0.00 0.00 4.30
212 215 4.359996 AGTTAAGAGATCCCGTAAACCCT 58.640 43.478 0.00 0.00 0.00 4.34
213 216 4.750021 AGTTAAGAGATCCCGTAAACCC 57.250 45.455 0.00 0.00 0.00 4.11
214 217 6.871844 AGTTAGTTAAGAGATCCCGTAAACC 58.128 40.000 0.00 0.00 0.00 3.27
215 218 9.860898 TTTAGTTAGTTAAGAGATCCCGTAAAC 57.139 33.333 0.00 0.00 0.00 2.01
216 219 9.860898 GTTTAGTTAGTTAAGAGATCCCGTAAA 57.139 33.333 0.00 0.00 0.00 2.01
217 220 8.470002 GGTTTAGTTAGTTAAGAGATCCCGTAA 58.530 37.037 0.00 0.00 0.00 3.18
218 221 7.836183 AGGTTTAGTTAGTTAAGAGATCCCGTA 59.164 37.037 0.00 0.00 0.00 4.02
219 222 6.666980 AGGTTTAGTTAGTTAAGAGATCCCGT 59.333 38.462 0.00 0.00 0.00 5.28
220 223 7.110043 AGGTTTAGTTAGTTAAGAGATCCCG 57.890 40.000 0.00 0.00 0.00 5.14
221 224 7.980662 GTGAGGTTTAGTTAGTTAAGAGATCCC 59.019 40.741 0.00 0.00 0.00 3.85
222 225 8.529476 TGTGAGGTTTAGTTAGTTAAGAGATCC 58.471 37.037 0.00 0.00 0.00 3.36
223 226 9.356433 GTGTGAGGTTTAGTTAGTTAAGAGATC 57.644 37.037 0.00 0.00 0.00 2.75
224 227 8.312564 GGTGTGAGGTTTAGTTAGTTAAGAGAT 58.687 37.037 0.00 0.00 0.00 2.75
225 228 7.256083 GGGTGTGAGGTTTAGTTAGTTAAGAGA 60.256 40.741 0.00 0.00 0.00 3.10
226 229 6.872547 GGGTGTGAGGTTTAGTTAGTTAAGAG 59.127 42.308 0.00 0.00 0.00 2.85
227 230 6.239686 GGGGTGTGAGGTTTAGTTAGTTAAGA 60.240 42.308 0.00 0.00 0.00 2.10
228 231 5.936372 GGGGTGTGAGGTTTAGTTAGTTAAG 59.064 44.000 0.00 0.00 0.00 1.85
229 232 5.221904 GGGGGTGTGAGGTTTAGTTAGTTAA 60.222 44.000 0.00 0.00 0.00 2.01
230 233 4.286808 GGGGGTGTGAGGTTTAGTTAGTTA 59.713 45.833 0.00 0.00 0.00 2.24
231 234 3.073503 GGGGGTGTGAGGTTTAGTTAGTT 59.926 47.826 0.00 0.00 0.00 2.24
232 235 2.641321 GGGGGTGTGAGGTTTAGTTAGT 59.359 50.000 0.00 0.00 0.00 2.24
233 236 2.910977 AGGGGGTGTGAGGTTTAGTTAG 59.089 50.000 0.00 0.00 0.00 2.34
234 237 2.908351 GAGGGGGTGTGAGGTTTAGTTA 59.092 50.000 0.00 0.00 0.00 2.24
235 238 1.703513 GAGGGGGTGTGAGGTTTAGTT 59.296 52.381 0.00 0.00 0.00 2.24
236 239 1.359168 GAGGGGGTGTGAGGTTTAGT 58.641 55.000 0.00 0.00 0.00 2.24
237 240 0.618981 GGAGGGGGTGTGAGGTTTAG 59.381 60.000 0.00 0.00 0.00 1.85
238 241 0.843343 GGGAGGGGGTGTGAGGTTTA 60.843 60.000 0.00 0.00 0.00 2.01
239 242 2.160853 GGGAGGGGGTGTGAGGTTT 61.161 63.158 0.00 0.00 0.00 3.27
240 243 2.531942 GGGAGGGGGTGTGAGGTT 60.532 66.667 0.00 0.00 0.00 3.50
241 244 4.677151 GGGGAGGGGGTGTGAGGT 62.677 72.222 0.00 0.00 0.00 3.85
264 267 2.414785 CCCTTGAAAATCGCGGGGG 61.415 63.158 6.13 1.76 0.00 5.40
265 268 3.196648 CCCTTGAAAATCGCGGGG 58.803 61.111 6.13 1.55 0.00 5.73
266 269 1.677633 ACCCCTTGAAAATCGCGGG 60.678 57.895 6.13 0.00 36.55 6.13
267 270 1.241315 ACACCCCTTGAAAATCGCGG 61.241 55.000 6.13 0.00 0.00 6.46
268 271 0.109781 CACACCCCTTGAAAATCGCG 60.110 55.000 0.00 0.00 0.00 5.87
269 272 0.243636 CCACACCCCTTGAAAATCGC 59.756 55.000 0.00 0.00 0.00 4.58
270 273 0.887933 CCCACACCCCTTGAAAATCG 59.112 55.000 0.00 0.00 0.00 3.34
271 274 0.608130 GCCCACACCCCTTGAAAATC 59.392 55.000 0.00 0.00 0.00 2.17
272 275 0.835971 GGCCCACACCCCTTGAAAAT 60.836 55.000 0.00 0.00 0.00 1.82
273 276 1.458588 GGCCCACACCCCTTGAAAA 60.459 57.895 0.00 0.00 0.00 2.29
274 277 2.200092 GGCCCACACCCCTTGAAA 59.800 61.111 0.00 0.00 0.00 2.69
275 278 3.909651 GGGCCCACACCCCTTGAA 61.910 66.667 19.95 0.00 45.00 2.69
286 289 2.208562 AATAGGGAGTGGAGGGCCCA 62.209 60.000 27.56 0.00 44.55 5.36
287 290 1.386057 AATAGGGAGTGGAGGGCCC 60.386 63.158 16.46 16.46 42.37 5.80
288 291 0.400670 AGAATAGGGAGTGGAGGGCC 60.401 60.000 0.00 0.00 0.00 5.80
289 292 1.418264 GAAGAATAGGGAGTGGAGGGC 59.582 57.143 0.00 0.00 0.00 5.19
290 293 2.050918 GGAAGAATAGGGAGTGGAGGG 58.949 57.143 0.00 0.00 0.00 4.30
291 294 2.764269 TGGAAGAATAGGGAGTGGAGG 58.236 52.381 0.00 0.00 0.00 4.30
292 295 4.410228 TGATTGGAAGAATAGGGAGTGGAG 59.590 45.833 0.00 0.00 0.00 3.86
293 296 4.164221 GTGATTGGAAGAATAGGGAGTGGA 59.836 45.833 0.00 0.00 0.00 4.02
294 297 4.164988 AGTGATTGGAAGAATAGGGAGTGG 59.835 45.833 0.00 0.00 0.00 4.00
295 298 5.365021 AGTGATTGGAAGAATAGGGAGTG 57.635 43.478 0.00 0.00 0.00 3.51
296 299 6.394345 AAAGTGATTGGAAGAATAGGGAGT 57.606 37.500 0.00 0.00 0.00 3.85
297 300 7.663493 GGATAAAGTGATTGGAAGAATAGGGAG 59.337 40.741 0.00 0.00 0.00 4.30
298 301 7.421382 GGGATAAAGTGATTGGAAGAATAGGGA 60.421 40.741 0.00 0.00 0.00 4.20
299 302 6.717084 GGGATAAAGTGATTGGAAGAATAGGG 59.283 42.308 0.00 0.00 0.00 3.53
300 303 7.229506 GTGGGATAAAGTGATTGGAAGAATAGG 59.770 40.741 0.00 0.00 0.00 2.57
301 304 7.229506 GGTGGGATAAAGTGATTGGAAGAATAG 59.770 40.741 0.00 0.00 0.00 1.73
302 305 7.060421 GGTGGGATAAAGTGATTGGAAGAATA 58.940 38.462 0.00 0.00 0.00 1.75
303 306 5.893824 GGTGGGATAAAGTGATTGGAAGAAT 59.106 40.000 0.00 0.00 0.00 2.40
304 307 5.015178 AGGTGGGATAAAGTGATTGGAAGAA 59.985 40.000 0.00 0.00 0.00 2.52
305 308 4.540099 AGGTGGGATAAAGTGATTGGAAGA 59.460 41.667 0.00 0.00 0.00 2.87
306 309 4.860022 AGGTGGGATAAAGTGATTGGAAG 58.140 43.478 0.00 0.00 0.00 3.46
307 310 4.946160 AGGTGGGATAAAGTGATTGGAA 57.054 40.909 0.00 0.00 0.00 3.53
308 311 5.631481 GCTTAGGTGGGATAAAGTGATTGGA 60.631 44.000 0.00 0.00 0.00 3.53
309 312 4.580580 GCTTAGGTGGGATAAAGTGATTGG 59.419 45.833 0.00 0.00 0.00 3.16
310 313 5.066505 GTGCTTAGGTGGGATAAAGTGATTG 59.933 44.000 0.00 0.00 0.00 2.67
311 314 5.193679 GTGCTTAGGTGGGATAAAGTGATT 58.806 41.667 0.00 0.00 0.00 2.57
312 315 4.385310 GGTGCTTAGGTGGGATAAAGTGAT 60.385 45.833 0.00 0.00 0.00 3.06
313 316 3.054655 GGTGCTTAGGTGGGATAAAGTGA 60.055 47.826 0.00 0.00 0.00 3.41
314 317 3.054361 AGGTGCTTAGGTGGGATAAAGTG 60.054 47.826 0.00 0.00 0.00 3.16
315 318 3.054361 CAGGTGCTTAGGTGGGATAAAGT 60.054 47.826 0.00 0.00 0.00 2.66
316 319 3.545703 CAGGTGCTTAGGTGGGATAAAG 58.454 50.000 0.00 0.00 0.00 1.85
317 320 2.241176 CCAGGTGCTTAGGTGGGATAAA 59.759 50.000 0.00 0.00 0.00 1.40
318 321 1.843851 CCAGGTGCTTAGGTGGGATAA 59.156 52.381 0.00 0.00 0.00 1.75
319 322 1.507140 CCAGGTGCTTAGGTGGGATA 58.493 55.000 0.00 0.00 0.00 2.59
320 323 2.311287 CCAGGTGCTTAGGTGGGAT 58.689 57.895 0.00 0.00 0.00 3.85
321 324 3.820425 CCAGGTGCTTAGGTGGGA 58.180 61.111 0.00 0.00 0.00 4.37
322 325 2.677228 CCCAGGTGCTTAGGTGGG 59.323 66.667 0.00 0.00 43.83 4.61
323 326 0.404040 TTTCCCAGGTGCTTAGGTGG 59.596 55.000 0.00 0.00 0.00 4.61
324 327 2.514458 ATTTCCCAGGTGCTTAGGTG 57.486 50.000 0.00 0.00 0.00 4.00
325 328 2.241430 GGTATTTCCCAGGTGCTTAGGT 59.759 50.000 0.00 0.00 0.00 3.08
326 329 2.932261 GGTATTTCCCAGGTGCTTAGG 58.068 52.381 0.00 0.00 0.00 2.69
338 341 2.289565 CGAGAGCCAAAGGGTATTTCC 58.710 52.381 0.00 0.00 36.17 3.13
353 356 6.701145 ATAGGGTGTATATACATGCGAGAG 57.299 41.667 18.27 0.00 38.63 3.20
354 357 7.230712 CCATATAGGGTGTATATACATGCGAGA 59.769 40.741 18.27 4.71 38.63 4.04
355 358 7.371159 CCATATAGGGTGTATATACATGCGAG 58.629 42.308 18.27 5.08 38.63 5.03
356 359 7.284919 CCATATAGGGTGTATATACATGCGA 57.715 40.000 18.27 6.01 38.63 5.10
427 430 9.796120 CACAAGTAAGTCAAGTTTAATCCAAAA 57.204 29.630 0.00 0.00 0.00 2.44
428 431 7.918562 GCACAAGTAAGTCAAGTTTAATCCAAA 59.081 33.333 0.00 0.00 0.00 3.28
429 432 7.067615 TGCACAAGTAAGTCAAGTTTAATCCAA 59.932 33.333 0.00 0.00 0.00 3.53
430 433 6.544197 TGCACAAGTAAGTCAAGTTTAATCCA 59.456 34.615 0.00 0.00 0.00 3.41
431 434 6.856426 GTGCACAAGTAAGTCAAGTTTAATCC 59.144 38.462 13.17 0.00 0.00 3.01
432 435 7.639945 AGTGCACAAGTAAGTCAAGTTTAATC 58.360 34.615 21.04 0.00 0.00 1.75
433 436 7.568199 AGTGCACAAGTAAGTCAAGTTTAAT 57.432 32.000 21.04 0.00 0.00 1.40
434 437 6.995511 AGTGCACAAGTAAGTCAAGTTTAA 57.004 33.333 21.04 0.00 0.00 1.52
435 438 7.270047 ACTAGTGCACAAGTAAGTCAAGTTTA 58.730 34.615 21.04 0.00 0.00 2.01
436 439 6.113411 ACTAGTGCACAAGTAAGTCAAGTTT 58.887 36.000 21.04 0.00 0.00 2.66
437 440 5.671493 ACTAGTGCACAAGTAAGTCAAGTT 58.329 37.500 21.04 0.00 0.00 2.66
438 441 5.277857 ACTAGTGCACAAGTAAGTCAAGT 57.722 39.130 21.04 3.51 0.00 3.16
477 480 4.201881 GCTGTGAAGTCAACGTAGGTTTTT 60.202 41.667 0.00 0.00 32.98 1.94
478 481 3.311596 GCTGTGAAGTCAACGTAGGTTTT 59.688 43.478 0.00 0.00 32.98 2.43
479 482 2.870411 GCTGTGAAGTCAACGTAGGTTT 59.130 45.455 0.00 0.00 32.98 3.27
480 483 2.480845 GCTGTGAAGTCAACGTAGGTT 58.519 47.619 0.00 0.00 36.63 3.50
481 484 1.602165 CGCTGTGAAGTCAACGTAGGT 60.602 52.381 0.00 0.00 0.00 3.08
482 485 1.060713 CGCTGTGAAGTCAACGTAGG 58.939 55.000 0.00 0.00 0.00 3.18
483 486 2.046283 TCGCTGTGAAGTCAACGTAG 57.954 50.000 0.00 0.00 0.00 3.51
484 487 2.495409 TTCGCTGTGAAGTCAACGTA 57.505 45.000 0.00 0.00 31.44 3.57
485 488 1.647346 TTTCGCTGTGAAGTCAACGT 58.353 45.000 3.65 0.00 37.99 3.99
486 489 2.730183 TTTTCGCTGTGAAGTCAACG 57.270 45.000 3.65 0.00 37.99 4.10
487 490 4.029043 GTCTTTTTCGCTGTGAAGTCAAC 58.971 43.478 3.65 0.00 37.99 3.18
488 491 3.687212 TGTCTTTTTCGCTGTGAAGTCAA 59.313 39.130 3.65 0.00 37.99 3.18
489 492 3.266636 TGTCTTTTTCGCTGTGAAGTCA 58.733 40.909 3.65 0.00 37.99 3.41
490 493 3.944422 TGTCTTTTTCGCTGTGAAGTC 57.056 42.857 3.65 0.00 37.99 3.01
491 494 4.695217 TTTGTCTTTTTCGCTGTGAAGT 57.305 36.364 3.65 0.00 37.99 3.01
492 495 6.573617 AATTTTGTCTTTTTCGCTGTGAAG 57.426 33.333 3.65 0.00 37.99 3.02
493 496 6.367422 ACAAATTTTGTCTTTTTCGCTGTGAA 59.633 30.769 8.97 0.00 40.56 3.18
494 497 5.866633 ACAAATTTTGTCTTTTTCGCTGTGA 59.133 32.000 8.97 0.00 40.56 3.58
495 498 6.093532 ACAAATTTTGTCTTTTTCGCTGTG 57.906 33.333 8.97 0.00 40.56 3.66
496 499 6.720012 AACAAATTTTGTCTTTTTCGCTGT 57.280 29.167 14.80 0.00 44.59 4.40
497 500 6.022329 GCAAACAAATTTTGTCTTTTTCGCTG 60.022 34.615 14.80 4.01 44.59 5.18
498 501 6.020984 GCAAACAAATTTTGTCTTTTTCGCT 58.979 32.000 14.80 0.00 44.59 4.93
499 502 6.020984 AGCAAACAAATTTTGTCTTTTTCGC 58.979 32.000 14.80 11.04 44.59 4.70
500 503 9.701355 AATAGCAAACAAATTTTGTCTTTTTCG 57.299 25.926 14.80 3.47 44.59 3.46
518 521 9.219603 GCATGAATAGTGACCTATAATAGCAAA 57.780 33.333 0.00 0.00 32.57 3.68
519 522 8.597167 AGCATGAATAGTGACCTATAATAGCAA 58.403 33.333 0.00 0.00 32.57 3.91
520 523 8.138928 AGCATGAATAGTGACCTATAATAGCA 57.861 34.615 0.00 0.00 32.57 3.49
527 530 9.277783 GTCAAAATAGCATGAATAGTGACCTAT 57.722 33.333 0.00 0.00 35.33 2.57
528 531 7.715249 GGTCAAAATAGCATGAATAGTGACCTA 59.285 37.037 21.62 5.38 45.82 3.08
529 532 6.543831 GGTCAAAATAGCATGAATAGTGACCT 59.456 38.462 21.62 3.79 45.82 3.85
530 533 6.729187 GGTCAAAATAGCATGAATAGTGACC 58.271 40.000 18.05 18.05 43.97 4.02
531 534 7.320443 TGGTCAAAATAGCATGAATAGTGAC 57.680 36.000 0.00 6.44 33.70 3.67
532 535 7.936496 TTGGTCAAAATAGCATGAATAGTGA 57.064 32.000 0.00 0.00 0.00 3.41
533 536 8.984891 TTTTGGTCAAAATAGCATGAATAGTG 57.015 30.769 0.00 0.00 35.57 2.74
538 541 9.118300 ACAAATTTTTGGTCAAAATAGCATGAA 57.882 25.926 9.32 0.00 43.20 2.57
539 542 8.674263 ACAAATTTTTGGTCAAAATAGCATGA 57.326 26.923 9.32 0.00 43.20 3.07
540 543 8.776470 AGACAAATTTTTGGTCAAAATAGCATG 58.224 29.630 9.32 7.61 43.20 4.06
541 544 8.907222 AGACAAATTTTTGGTCAAAATAGCAT 57.093 26.923 9.32 0.00 43.20 3.79
542 545 8.729805 AAGACAAATTTTTGGTCAAAATAGCA 57.270 26.923 9.32 0.00 43.20 3.49
579 582 9.927668 TCACAAAAAGAAAATTTCTCTTTGACT 57.072 25.926 30.05 13.88 45.91 3.41
592 595 9.541143 AGTGAGAAAAGTTTCACAAAAAGAAAA 57.459 25.926 8.50 0.00 44.72 2.29
660 663 9.911138 AGCAATTCAACAAAAAGTCAAAAATTT 57.089 22.222 0.00 0.00 0.00 1.82
706 709 7.825270 AACTTTTGGTTCGTGGATACATATGTA 59.175 33.333 17.65 17.65 41.41 2.29
707 710 6.657541 AACTTTTGGTTCGTGGATACATATGT 59.342 34.615 13.93 13.93 41.41 2.29
708 711 7.083875 AACTTTTGGTTCGTGGATACATATG 57.916 36.000 0.00 0.00 41.41 1.78
709 712 7.316544 GAACTTTTGGTTCGTGGATACATAT 57.683 36.000 0.00 0.00 46.50 1.78
710 713 6.730960 GAACTTTTGGTTCGTGGATACATA 57.269 37.500 0.00 0.00 46.50 2.29
711 714 5.622770 GAACTTTTGGTTCGTGGATACAT 57.377 39.130 0.00 0.00 46.50 2.29
722 725 1.241485 AGGGAGGGGAACTTTTGGTT 58.759 50.000 0.00 0.00 41.40 3.67
723 726 2.143231 TAGGGAGGGGAACTTTTGGT 57.857 50.000 0.00 0.00 0.00 3.67
724 727 2.884304 GCTTAGGGAGGGGAACTTTTGG 60.884 54.545 0.00 0.00 0.00 3.28
725 728 2.225017 TGCTTAGGGAGGGGAACTTTTG 60.225 50.000 0.00 0.00 0.00 2.44
726 729 2.070573 TGCTTAGGGAGGGGAACTTTT 58.929 47.619 0.00 0.00 0.00 2.27
727 730 1.354705 GTGCTTAGGGAGGGGAACTTT 59.645 52.381 0.00 0.00 0.00 2.66
728 731 0.992695 GTGCTTAGGGAGGGGAACTT 59.007 55.000 0.00 0.00 0.00 2.66
729 732 0.914902 GGTGCTTAGGGAGGGGAACT 60.915 60.000 0.00 0.00 0.00 3.01
730 733 0.914902 AGGTGCTTAGGGAGGGGAAC 60.915 60.000 0.00 0.00 0.00 3.62
731 734 0.178843 AAGGTGCTTAGGGAGGGGAA 60.179 55.000 0.00 0.00 0.00 3.97
732 735 0.620700 GAAGGTGCTTAGGGAGGGGA 60.621 60.000 0.00 0.00 0.00 4.81
733 736 1.915983 GAAGGTGCTTAGGGAGGGG 59.084 63.158 0.00 0.00 0.00 4.79
734 737 1.265454 ACGAAGGTGCTTAGGGAGGG 61.265 60.000 0.00 0.00 0.00 4.30
735 738 1.481871 TACGAAGGTGCTTAGGGAGG 58.518 55.000 0.00 0.00 0.00 4.30
736 739 3.056035 ACTTTACGAAGGTGCTTAGGGAG 60.056 47.826 0.00 0.00 37.19 4.30
737 740 2.901839 ACTTTACGAAGGTGCTTAGGGA 59.098 45.455 0.00 0.00 37.19 4.20
738 741 3.259902 GACTTTACGAAGGTGCTTAGGG 58.740 50.000 0.00 0.00 37.19 3.53
739 742 3.921677 TGACTTTACGAAGGTGCTTAGG 58.078 45.455 0.00 0.00 37.19 2.69
740 743 4.557205 ACTGACTTTACGAAGGTGCTTAG 58.443 43.478 0.00 0.00 37.19 2.18
741 744 4.595762 ACTGACTTTACGAAGGTGCTTA 57.404 40.909 0.00 0.00 37.19 3.09
742 745 3.470645 ACTGACTTTACGAAGGTGCTT 57.529 42.857 0.00 0.00 37.19 3.91
743 746 4.595762 TTACTGACTTTACGAAGGTGCT 57.404 40.909 0.00 0.00 37.19 4.40
744 747 5.662211 TTTTACTGACTTTACGAAGGTGC 57.338 39.130 0.00 0.00 37.19 5.01
745 748 7.242914 AGTTTTTACTGACTTTACGAAGGTG 57.757 36.000 0.00 0.00 37.19 4.00
746 749 7.677982 GCAAGTTTTTACTGACTTTACGAAGGT 60.678 37.037 0.00 0.00 37.19 3.50
747 750 6.631636 GCAAGTTTTTACTGACTTTACGAAGG 59.368 38.462 0.00 0.00 37.19 3.46
748 751 6.631636 GGCAAGTTTTTACTGACTTTACGAAG 59.368 38.462 0.00 0.00 34.04 3.79
749 752 6.458615 GGGCAAGTTTTTACTGACTTTACGAA 60.459 38.462 0.00 0.00 34.04 3.85
750 753 5.007921 GGGCAAGTTTTTACTGACTTTACGA 59.992 40.000 0.00 0.00 34.04 3.43
751 754 5.209977 GGGCAAGTTTTTACTGACTTTACG 58.790 41.667 0.00 0.00 34.04 3.18
752 755 5.209977 CGGGCAAGTTTTTACTGACTTTAC 58.790 41.667 0.00 0.00 34.04 2.01
753 756 4.883006 ACGGGCAAGTTTTTACTGACTTTA 59.117 37.500 0.00 0.00 34.04 1.85
754 757 3.697542 ACGGGCAAGTTTTTACTGACTTT 59.302 39.130 0.00 0.00 34.04 2.66
755 758 3.066203 CACGGGCAAGTTTTTACTGACTT 59.934 43.478 0.00 0.00 36.58 3.01
756 759 2.616842 CACGGGCAAGTTTTTACTGACT 59.383 45.455 0.00 0.00 0.00 3.41
757 760 2.857104 GCACGGGCAAGTTTTTACTGAC 60.857 50.000 3.77 0.00 40.72 3.51
758 761 1.335496 GCACGGGCAAGTTTTTACTGA 59.665 47.619 3.77 0.00 40.72 3.41
759 762 1.766069 GCACGGGCAAGTTTTTACTG 58.234 50.000 3.77 0.00 40.72 2.74
760 763 0.309612 CGCACGGGCAAGTTTTTACT 59.690 50.000 11.77 0.00 41.24 2.24
761 764 0.029700 ACGCACGGGCAAGTTTTTAC 59.970 50.000 11.77 0.00 41.24 2.01
762 765 0.029567 CACGCACGGGCAAGTTTTTA 59.970 50.000 11.77 0.00 41.24 1.52
763 766 1.226831 CACGCACGGGCAAGTTTTT 60.227 52.632 11.77 0.00 41.24 1.94
764 767 1.096386 TACACGCACGGGCAAGTTTT 61.096 50.000 11.77 0.00 41.24 2.43
765 768 0.887387 ATACACGCACGGGCAAGTTT 60.887 50.000 11.77 0.00 41.24 2.66
766 769 1.296056 GATACACGCACGGGCAAGTT 61.296 55.000 11.77 0.00 41.24 2.66
767 770 1.740296 GATACACGCACGGGCAAGT 60.740 57.895 11.77 10.19 41.24 3.16
768 771 1.089481 ATGATACACGCACGGGCAAG 61.089 55.000 11.77 2.97 41.24 4.01
769 772 0.675208 AATGATACACGCACGGGCAA 60.675 50.000 11.77 0.00 41.24 4.52
770 773 1.078778 AATGATACACGCACGGGCA 60.079 52.632 11.77 0.00 41.24 5.36
771 774 1.351707 CAATGATACACGCACGGGC 59.648 57.895 0.00 0.00 0.00 6.13
772 775 1.089481 AGCAATGATACACGCACGGG 61.089 55.000 0.00 0.00 0.00 5.28
773 776 0.301687 GAGCAATGATACACGCACGG 59.698 55.000 0.00 0.00 0.00 4.94
774 777 0.998669 TGAGCAATGATACACGCACG 59.001 50.000 0.00 0.00 0.00 5.34
775 778 2.868583 AGATGAGCAATGATACACGCAC 59.131 45.455 0.00 0.00 0.00 5.34
776 779 2.867975 CAGATGAGCAATGATACACGCA 59.132 45.455 0.00 0.00 0.00 5.24
777 780 3.126073 TCAGATGAGCAATGATACACGC 58.874 45.455 0.00 0.00 0.00 5.34
778 781 5.919272 ATTCAGATGAGCAATGATACACG 57.081 39.130 0.00 0.00 0.00 4.49
779 782 7.719778 TGTATTCAGATGAGCAATGATACAC 57.280 36.000 0.00 0.00 0.00 2.90
780 783 7.227314 GGTTGTATTCAGATGAGCAATGATACA 59.773 37.037 0.00 0.00 0.00 2.29
781 784 7.227314 TGGTTGTATTCAGATGAGCAATGATAC 59.773 37.037 0.00 0.00 0.00 2.24
782 785 7.281841 TGGTTGTATTCAGATGAGCAATGATA 58.718 34.615 0.00 0.00 0.00 2.15
783 786 6.124340 TGGTTGTATTCAGATGAGCAATGAT 58.876 36.000 0.00 0.00 0.00 2.45
784 787 5.499313 TGGTTGTATTCAGATGAGCAATGA 58.501 37.500 0.00 0.00 0.00 2.57
785 788 5.823209 TGGTTGTATTCAGATGAGCAATG 57.177 39.130 0.00 0.00 0.00 2.82
786 789 5.126061 GGTTGGTTGTATTCAGATGAGCAAT 59.874 40.000 0.00 0.00 0.00 3.56
787 790 4.458989 GGTTGGTTGTATTCAGATGAGCAA 59.541 41.667 0.00 0.00 0.00 3.91
788 791 4.009675 GGTTGGTTGTATTCAGATGAGCA 58.990 43.478 0.00 0.00 0.00 4.26
789 792 4.009675 TGGTTGGTTGTATTCAGATGAGC 58.990 43.478 0.00 0.00 0.00 4.26
790 793 5.003160 TGTGGTTGGTTGTATTCAGATGAG 58.997 41.667 0.00 0.00 0.00 2.90
791 794 4.759693 GTGTGGTTGGTTGTATTCAGATGA 59.240 41.667 0.00 0.00 0.00 2.92
792 795 4.082787 GGTGTGGTTGGTTGTATTCAGATG 60.083 45.833 0.00 0.00 0.00 2.90
793 796 4.079253 GGTGTGGTTGGTTGTATTCAGAT 58.921 43.478 0.00 0.00 0.00 2.90
794 797 3.482436 GGTGTGGTTGGTTGTATTCAGA 58.518 45.455 0.00 0.00 0.00 3.27
795 798 2.556622 GGGTGTGGTTGGTTGTATTCAG 59.443 50.000 0.00 0.00 0.00 3.02
796 799 2.091830 TGGGTGTGGTTGGTTGTATTCA 60.092 45.455 0.00 0.00 0.00 2.57
797 800 2.588620 TGGGTGTGGTTGGTTGTATTC 58.411 47.619 0.00 0.00 0.00 1.75
798 801 2.757894 TGGGTGTGGTTGGTTGTATT 57.242 45.000 0.00 0.00 0.00 1.89
799 802 2.091555 ACTTGGGTGTGGTTGGTTGTAT 60.092 45.455 0.00 0.00 0.00 2.29
800 803 1.285373 ACTTGGGTGTGGTTGGTTGTA 59.715 47.619 0.00 0.00 0.00 2.41
801 804 0.040499 ACTTGGGTGTGGTTGGTTGT 59.960 50.000 0.00 0.00 0.00 3.32
802 805 0.459489 CACTTGGGTGTGGTTGGTTG 59.541 55.000 0.00 0.00 38.54 3.77
803 806 2.894858 CACTTGGGTGTGGTTGGTT 58.105 52.632 0.00 0.00 38.54 3.67
804 807 4.676363 CACTTGGGTGTGGTTGGT 57.324 55.556 0.00 0.00 38.54 3.67
866 869 0.692756 GGAGGGAGGAAGGAAGGGAG 60.693 65.000 0.00 0.00 0.00 4.30
903 911 2.433318 GCGAGTGGGTGAGTGAGC 60.433 66.667 0.00 0.00 0.00 4.26
952 961 1.678101 CCCGAAATGGCAATTCCTCTC 59.322 52.381 9.59 0.00 35.87 3.20
983 992 1.610102 CCATCTGCCCGATCTGATTCC 60.610 57.143 0.00 0.00 0.00 3.01
1020 1029 1.827969 CTCATCTCCAGGAAGACGGTT 59.172 52.381 0.00 0.00 0.00 4.44
1021 1030 1.479709 CTCATCTCCAGGAAGACGGT 58.520 55.000 0.00 0.00 0.00 4.83
1022 1031 0.103937 GCTCATCTCCAGGAAGACGG 59.896 60.000 0.00 0.00 0.00 4.79
1023 1032 0.103937 GGCTCATCTCCAGGAAGACG 59.896 60.000 0.00 0.00 0.00 4.18
1024 1033 1.412343 GAGGCTCATCTCCAGGAAGAC 59.588 57.143 10.25 0.00 0.00 3.01
1025 1034 1.786937 GAGGCTCATCTCCAGGAAGA 58.213 55.000 10.25 0.00 0.00 2.87
1026 1035 0.388659 CGAGGCTCATCTCCAGGAAG 59.611 60.000 15.95 0.00 0.00 3.46
1027 1036 1.045350 CCGAGGCTCATCTCCAGGAA 61.045 60.000 15.95 0.00 0.00 3.36
1028 1037 1.456518 CCGAGGCTCATCTCCAGGA 60.457 63.158 15.95 0.00 0.00 3.86
1029 1038 3.136750 CCGAGGCTCATCTCCAGG 58.863 66.667 15.95 1.39 0.00 4.45
1030 1039 2.420890 GCCGAGGCTCATCTCCAG 59.579 66.667 15.95 0.00 38.26 3.86
1031 1040 2.364186 TGCCGAGGCTCATCTCCA 60.364 61.111 15.95 0.56 42.51 3.86
1032 1041 2.107953 GTGCCGAGGCTCATCTCC 59.892 66.667 15.95 0.00 42.51 3.71
1033 1042 1.067250 GAGTGCCGAGGCTCATCTC 59.933 63.158 15.95 11.49 42.51 2.75
1034 1043 2.780094 CGAGTGCCGAGGCTCATCT 61.780 63.158 15.95 6.40 41.76 2.90
1035 1044 2.279120 CGAGTGCCGAGGCTCATC 60.279 66.667 15.95 5.69 41.76 2.92
1036 1045 4.521062 GCGAGTGCCGAGGCTCAT 62.521 66.667 15.95 0.86 41.76 2.90
1185 1226 7.170658 CGAGAGAAAGAGACAAGATTTGTTCTT 59.829 37.037 10.66 10.66 45.52 2.52
1199 1240 3.469008 TTTGCAACCGAGAGAAAGAGA 57.531 42.857 0.00 0.00 0.00 3.10
1202 1243 4.488126 TTGATTTGCAACCGAGAGAAAG 57.512 40.909 0.00 0.00 0.00 2.62
1232 1273 1.522580 GCTCAGGCCCAGACGAATC 60.523 63.158 0.00 0.00 0.00 2.52
1239 1280 0.538057 TTTTGTCAGCTCAGGCCCAG 60.538 55.000 0.00 0.00 39.73 4.45
1241 1282 1.527433 GGTTTTGTCAGCTCAGGCCC 61.527 60.000 0.00 0.00 39.73 5.80
1357 1398 0.963962 TGGACAGTACCTTGACGGAC 59.036 55.000 0.00 0.00 36.31 4.79
1412 1468 3.189287 GGATCAGCGGGCATGTTAATTAG 59.811 47.826 0.00 0.00 0.00 1.73
1413 1469 3.146066 GGATCAGCGGGCATGTTAATTA 58.854 45.455 0.00 0.00 0.00 1.40
1414 1470 1.956477 GGATCAGCGGGCATGTTAATT 59.044 47.619 0.00 0.00 0.00 1.40
1424 1480 1.335810 CATTCAACATGGATCAGCGGG 59.664 52.381 0.00 0.00 0.00 6.13
1517 1588 2.671963 GCCCCGTGGAACTGGAAC 60.672 66.667 0.00 0.00 45.00 3.62
1632 1709 1.155042 CAGCTTGGTTCAGAGTGAGC 58.845 55.000 0.00 0.00 0.00 4.26
1778 1894 1.078848 ATCAGTCCCGTTGCTGCTC 60.079 57.895 0.00 0.00 33.09 4.26
1791 1907 3.617368 CGACCCCTTCGGATCAGT 58.383 61.111 0.00 0.00 44.60 3.41
1805 1921 1.448717 GGCCTCTGCTTCCTTCGAC 60.449 63.158 0.00 0.00 37.74 4.20
1898 2014 4.093952 CTGCTGTTCGCCGCCTTG 62.094 66.667 0.00 0.00 38.05 3.61
2401 2604 0.745845 GATGCAACGGACAGAGGCAT 60.746 55.000 0.00 7.99 42.43 4.40
2508 2718 7.063426 GCATATGCAAGCGAAACATAGAGTATA 59.937 37.037 22.84 0.00 41.59 1.47
2509 2719 6.128445 GCATATGCAAGCGAAACATAGAGTAT 60.128 38.462 22.84 0.00 41.59 2.12
2512 2722 4.212847 AGCATATGCAAGCGAAACATAGAG 59.787 41.667 28.62 0.00 45.16 2.43
2514 2725 4.478843 AGCATATGCAAGCGAAACATAG 57.521 40.909 28.62 0.00 45.16 2.23
2528 2739 8.682936 AGGAGGTTGATAAAAACTAGCATATG 57.317 34.615 0.00 0.00 0.00 1.78
2589 2804 0.164647 GTCACACAAAGCTAGCGCAG 59.835 55.000 11.47 6.31 39.10 5.18
2663 2880 2.298446 ACATAGGCCTGATCGAGATGTG 59.702 50.000 17.99 0.00 0.00 3.21
2690 2907 2.288213 GCAGCCACTACTTTCCCAAAAC 60.288 50.000 0.00 0.00 0.00 2.43
2694 2911 0.250727 GTGCAGCCACTACTTTCCCA 60.251 55.000 0.00 0.00 38.93 4.37
2697 2914 0.250727 TGGGTGCAGCCACTACTTTC 60.251 55.000 33.13 4.75 41.75 2.62
2879 3113 4.035091 TGTGAACACTGAACAGTAACATGC 59.965 41.667 7.15 0.00 40.20 4.06
3000 5607 4.629634 CCCTTCAAACACCACAAAGAAAAC 59.370 41.667 0.00 0.00 0.00 2.43
3028 5635 2.480555 CTTTACCGCTGCGCCAAG 59.519 61.111 18.00 13.33 0.00 3.61
3036 5643 0.537371 AAGGCAACAGCTTTACCGCT 60.537 50.000 0.00 0.00 41.90 5.52
3037 5644 0.387239 CAAGGCAACAGCTTTACCGC 60.387 55.000 0.00 0.00 41.41 5.68
3038 5645 0.951558 ACAAGGCAACAGCTTTACCG 59.048 50.000 0.00 0.00 41.41 4.02
3039 5646 1.953686 TCACAAGGCAACAGCTTTACC 59.046 47.619 0.00 0.00 41.41 2.85
3040 5647 2.287608 GGTCACAAGGCAACAGCTTTAC 60.288 50.000 0.00 0.00 41.41 2.01
3042 5649 0.746659 GGTCACAAGGCAACAGCTTT 59.253 50.000 0.00 0.00 41.41 3.51
3043 5650 0.395586 TGGTCACAAGGCAACAGCTT 60.396 50.000 0.00 0.00 41.41 3.74
3044 5651 0.178981 ATGGTCACAAGGCAACAGCT 60.179 50.000 0.00 0.00 41.41 4.24
3045 5652 0.038892 CATGGTCACAAGGCAACAGC 60.039 55.000 0.00 0.00 41.41 4.40
3046 5653 1.267806 GTCATGGTCACAAGGCAACAG 59.732 52.381 0.00 0.00 41.41 3.16
3047 5654 1.317613 GTCATGGTCACAAGGCAACA 58.682 50.000 0.00 0.00 41.41 3.33
3048 5655 0.238289 CGTCATGGTCACAAGGCAAC 59.762 55.000 0.00 0.00 0.00 4.17
3051 5658 0.602638 TGACGTCATGGTCACAAGGC 60.603 55.000 15.76 0.00 41.76 4.35
3052 5659 3.605013 TGACGTCATGGTCACAAGG 57.395 52.632 15.76 0.00 41.76 3.61
3063 5670 0.387622 GATTCGAACCCGTGACGTCA 60.388 55.000 15.76 15.76 37.05 4.35
3064 5671 1.074872 GGATTCGAACCCGTGACGTC 61.075 60.000 9.11 9.11 37.05 4.34
3065 5672 1.080298 GGATTCGAACCCGTGACGT 60.080 57.895 0.00 0.00 37.05 4.34
3067 5674 0.739813 CCAGGATTCGAACCCGTGAC 60.740 60.000 18.07 0.00 37.05 3.67
3069 5676 0.036765 TTCCAGGATTCGAACCCGTG 60.037 55.000 1.93 8.74 37.05 4.94
3070 5677 0.688487 TTTCCAGGATTCGAACCCGT 59.312 50.000 1.93 0.00 37.05 5.28
3071 5678 2.038387 ATTTCCAGGATTCGAACCCG 57.962 50.000 1.93 0.00 37.07 5.28
3072 5679 6.465439 AAATAATTTCCAGGATTCGAACCC 57.535 37.500 0.00 0.00 0.00 4.11
3073 5680 8.032451 TCAAAAATAATTTCCAGGATTCGAACC 58.968 33.333 0.00 4.22 0.00 3.62
3130 6891 3.139077 GCGATAATTCAATCCGGAACCT 58.861 45.455 9.01 0.00 0.00 3.50
3232 6994 2.036475 ACTACAGGCGGATCTGCATTAG 59.964 50.000 27.26 22.57 38.26 1.73
3299 7099 7.106239 GGACTTCCTCTCATATCAACTGAAAA 58.894 38.462 0.00 0.00 0.00 2.29
3342 7142 7.012327 TGGAATATAAGAAATGGAAAGCAGTCG 59.988 37.037 0.00 0.00 0.00 4.18
3343 7143 8.225603 TGGAATATAAGAAATGGAAAGCAGTC 57.774 34.615 0.00 0.00 0.00 3.51
3376 7176 5.003804 TCTTCCTTGCACCAGTTCTATTTC 58.996 41.667 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.