Multiple sequence alignment - TraesCS2D01G465000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G465000 chr2D 100.000 9880 0 0 1 9880 571071779 571081658 0.000000e+00 18246.0
1 TraesCS2D01G465000 chr2D 90.256 195 13 5 7168 7357 582498669 582498476 5.920000e-62 250.0
2 TraesCS2D01G465000 chr2A 96.265 6773 167 24 16 6757 709827585 709834302 0.000000e+00 11027.0
3 TraesCS2D01G465000 chr2A 95.858 1690 55 10 8201 9880 709836066 709837750 0.000000e+00 2719.0
4 TraesCS2D01G465000 chr2A 98.054 514 10 0 6759 7272 709834521 709835034 0.000000e+00 894.0
5 TraesCS2D01G465000 chr2A 97.907 430 8 1 7263 7691 709835443 709835872 0.000000e+00 743.0
6 TraesCS2D01G465000 chr2A 98.515 202 3 0 7804 8005 709835869 709836070 3.390000e-94 357.0
7 TraesCS2D01G465000 chr2B 95.309 4562 150 24 646 5174 683021533 683026063 0.000000e+00 7180.0
8 TraesCS2D01G465000 chr2B 95.077 1686 68 8 8201 9880 683028685 683030361 0.000000e+00 2639.0
9 TraesCS2D01G465000 chr2B 95.965 1140 38 5 5189 6323 683026114 683027250 0.000000e+00 1844.0
10 TraesCS2D01G465000 chr2B 91.564 569 15 5 17 578 683020995 683021537 0.000000e+00 754.0
11 TraesCS2D01G465000 chr2B 95.455 440 16 4 6746 7181 683027707 683028146 0.000000e+00 699.0
12 TraesCS2D01G465000 chr2B 89.157 415 23 8 6364 6757 683027250 683027663 1.920000e-136 497.0
13 TraesCS2D01G465000 chr2B 90.529 359 16 6 7340 7691 683028142 683028489 9.040000e-125 459.0
14 TraesCS2D01G465000 chr2B 98.039 204 2 1 7804 8005 683028486 683028689 4.390000e-93 353.0
15 TraesCS2D01G465000 chr2B 89.916 119 12 0 7688 7806 133018535 133018417 4.780000e-33 154.0
16 TraesCS2D01G465000 chr2B 85.417 144 14 7 7688 7829 518048173 518048035 1.030000e-29 143.0
17 TraesCS2D01G465000 chr4D 96.296 162 6 0 7180 7341 334164552 334164391 5.880000e-67 267.0
18 TraesCS2D01G465000 chr4D 94.083 169 10 0 7173 7341 64390464 64390632 3.540000e-64 257.0
19 TraesCS2D01G465000 chr4D 88.235 204 18 6 7174 7375 16653165 16652966 1.280000e-58 239.0
20 TraesCS2D01G465000 chr4D 91.000 100 8 1 4861 4959 414999562 414999661 6.230000e-27 134.0
21 TraesCS2D01G465000 chr4D 86.179 123 16 1 8044 8165 472662253 472662375 2.240000e-26 132.0
22 TraesCS2D01G465000 chr5A 93.678 174 10 1 7176 7349 558675493 558675665 9.840000e-65 259.0
23 TraesCS2D01G465000 chr5A 95.092 163 8 0 7179 7341 320214406 320214244 3.540000e-64 257.0
24 TraesCS2D01G465000 chr5A 88.618 123 13 1 8003 8124 135063744 135063622 2.220000e-31 148.0
25 TraesCS2D01G465000 chr3B 89.216 204 17 4 8003 8204 56067218 56067418 5.920000e-62 250.0
26 TraesCS2D01G465000 chr3B 91.257 183 12 4 7168 7349 674989961 674990140 7.660000e-61 246.0
27 TraesCS2D01G465000 chr3B 86.567 134 17 1 7686 7818 658489669 658489536 8.000000e-31 147.0
28 TraesCS2D01G465000 chr3B 80.226 177 19 11 8002 8165 818752863 818752690 1.740000e-22 119.0
29 TraesCS2D01G465000 chr3B 96.364 55 2 0 8150 8204 625336280 625336226 3.800000e-14 91.6
30 TraesCS2D01G465000 chr6B 91.257 183 12 4 7168 7349 15042248 15042427 7.660000e-61 246.0
31 TraesCS2D01G465000 chr6B 88.889 135 10 4 7681 7812 293966297 293966165 2.860000e-35 161.0
32 TraesCS2D01G465000 chr6B 77.679 224 26 8 8003 8204 140616214 140616435 2.250000e-21 115.0
33 TraesCS2D01G465000 chr4A 87.500 208 15 5 8003 8202 658949061 658949265 7.720000e-56 230.0
34 TraesCS2D01G465000 chr4A 88.281 128 14 1 7685 7812 677436033 677435907 1.720000e-32 152.0
35 TraesCS2D01G465000 chr5D 97.479 119 2 1 8049 8166 34049894 34049776 1.680000e-47 202.0
36 TraesCS2D01G465000 chr5D 84.906 159 19 5 8050 8204 423532507 423532350 1.330000e-33 156.0
37 TraesCS2D01G465000 chr5D 91.429 105 9 0 4854 4958 481427209 481427105 2.880000e-30 145.0
38 TraesCS2D01G465000 chr6A 84.722 216 16 8 8003 8204 897567 897779 6.050000e-47 200.0
39 TraesCS2D01G465000 chr7D 92.683 123 8 1 7684 7805 419375083 419374961 1.020000e-39 176.0
40 TraesCS2D01G465000 chr7D 90.840 131 10 2 8037 8165 137563124 137562994 3.670000e-39 174.0
41 TraesCS2D01G465000 chr7D 84.393 173 24 3 8000 8169 75944362 75944534 6.140000e-37 167.0
42 TraesCS2D01G465000 chr7A 92.683 123 8 1 7684 7805 513991291 513991413 1.020000e-39 176.0
43 TraesCS2D01G465000 chr7A 84.146 164 23 3 8044 8206 200511779 200511940 1.330000e-33 156.0
44 TraesCS2D01G465000 chr7B 84.706 170 24 2 7997 8165 576920329 576920497 1.710000e-37 169.0
45 TraesCS2D01G465000 chr7B 84.211 171 23 3 7997 8165 576928149 576928317 7.940000e-36 163.0
46 TraesCS2D01G465000 chr3D 88.550 131 15 0 7681 7811 94848714 94848844 1.030000e-34 159.0
47 TraesCS2D01G465000 chr3D 92.784 97 7 0 4861 4957 609983808 609983904 3.720000e-29 141.0
48 TraesCS2D01G465000 chr1D 80.660 212 33 5 8001 8204 83689076 83688865 3.690000e-34 158.0
49 TraesCS2D01G465000 chr1D 88.976 127 11 3 7687 7811 184046523 184046398 4.780000e-33 154.0
50 TraesCS2D01G465000 chr4B 86.861 137 16 2 8049 8183 97922026 97922162 1.720000e-32 152.0
51 TraesCS2D01G465000 chr4B 90.909 99 9 0 4861 4959 511163709 511163807 6.230000e-27 134.0
52 TraesCS2D01G465000 chr1A 91.346 104 9 0 4856 4959 293720532 293720635 1.030000e-29 143.0
53 TraesCS2D01G465000 chr1A 91.753 97 6 2 4861 4957 460934570 460934476 6.230000e-27 134.0
54 TraesCS2D01G465000 chr5B 88.785 107 10 2 4861 4966 589999828 589999933 8.050000e-26 130.0
55 TraesCS2D01G465000 chr1B 80.473 169 28 5 8032 8198 451733219 451733384 3.750000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G465000 chr2D 571071779 571081658 9879 False 18246.000 18246 100.000000 1 9880 1 chr2D.!!$F1 9879
1 TraesCS2D01G465000 chr2A 709827585 709837750 10165 False 3148.000 11027 97.319800 16 9880 5 chr2A.!!$F1 9864
2 TraesCS2D01G465000 chr2B 683020995 683030361 9366 False 1803.125 7180 93.886875 17 9880 8 chr2B.!!$F1 9863

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 460 0.251209 TCGAGGAGTAGCTGTGTGGT 60.251 55.000 0.00 0.00 0.00 4.16 F
453 461 0.603569 CGAGGAGTAGCTGTGTGGTT 59.396 55.000 0.00 0.00 0.00 3.67 F
457 465 1.344763 GGAGTAGCTGTGTGGTTCTGT 59.655 52.381 0.00 0.00 0.00 3.41 F
620 628 2.344592 TGGGGGAACTTTCTGCTCTTA 58.655 47.619 0.00 0.00 0.00 2.10 F
2240 2256 3.433615 GTGGACATCACTGTACTGCTTTC 59.566 47.826 0.00 0.00 42.86 2.62 F
3189 3207 1.168714 GTCCCTGCTGATGTTTGTCC 58.831 55.000 0.00 0.00 0.00 4.02 F
4225 4249 1.067516 CCTTGGTCAGTGGTTGCTTTG 59.932 52.381 0.00 0.00 0.00 2.77 F
4511 4554 4.021544 GTCATTGACCTGGGCAATTTGTTA 60.022 41.667 25.09 6.04 33.93 2.41 F
5685 5766 5.470098 TGTTGATTTCTTACTCTGAACCAGC 59.530 40.000 0.00 0.00 0.00 4.85 F
6225 6306 5.491070 TCTGTAGCTCTGTATTTGCATGTT 58.509 37.500 0.00 0.00 0.00 2.71 F
8016 8768 0.108281 GCAAGTACTCCCTCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1803 1817 2.827921 AGGACAAAGGATGAAATGGTGC 59.172 45.455 0.00 0.00 0.00 5.01 R
2399 2415 4.771590 ATGCTGAACATACAACAACCAG 57.228 40.909 0.00 0.00 37.17 4.00 R
2415 2431 7.041635 TCCCACATAATTCAATTGTATGCTG 57.958 36.000 5.13 5.62 0.00 4.41 R
2458 2474 3.287222 CTGGCTACTCTAGAGAAGCTGT 58.713 50.000 26.57 6.03 0.00 4.40 R
3994 4018 1.522258 CCACAAAACTGCAAATGCGAC 59.478 47.619 0.35 0.00 45.83 5.19 R
4252 4276 3.127895 CACTGTAGCTAGTGTCTCTCCAC 59.872 52.174 8.27 0.00 42.38 4.02 R
5733 5814 2.235155 TGAAGATAGGGTACGCTGCAAA 59.765 45.455 21.79 2.57 0.00 3.68 R
6456 6555 3.495331 TCAACAATTCAGGCAGCCTAAA 58.505 40.909 15.64 6.55 29.64 1.85 R
6633 6732 0.510790 CGTGCAATTGTGTCGTAGCA 59.489 50.000 7.40 0.00 0.00 3.49 R
8049 8801 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59 R
9530 10291 0.098200 CTGCATCGCCACAATCACAG 59.902 55.000 0.00 0.00 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
335 343 2.441750 GAGTTTGGGGGCATGGTATCTA 59.558 50.000 0.00 0.00 0.00 1.98
405 413 1.522569 CGATCAGTCCCAGGTTCCC 59.477 63.158 0.00 0.00 0.00 3.97
444 452 2.535331 CTTTCTGCTTCGAGGAGTAGC 58.465 52.381 0.00 0.00 42.68 3.58
445 453 1.840737 TTCTGCTTCGAGGAGTAGCT 58.159 50.000 7.50 0.00 42.79 3.32
446 454 1.098869 TCTGCTTCGAGGAGTAGCTG 58.901 55.000 7.50 7.03 42.79 4.24
447 455 0.814457 CTGCTTCGAGGAGTAGCTGT 59.186 55.000 7.50 0.00 42.79 4.40
448 456 0.528017 TGCTTCGAGGAGTAGCTGTG 59.472 55.000 7.50 0.00 42.79 3.66
449 457 0.528470 GCTTCGAGGAGTAGCTGTGT 59.472 55.000 0.00 0.00 39.74 3.72
450 458 1.734047 GCTTCGAGGAGTAGCTGTGTG 60.734 57.143 0.00 0.00 39.74 3.82
451 459 0.888619 TTCGAGGAGTAGCTGTGTGG 59.111 55.000 0.00 0.00 0.00 4.17
452 460 0.251209 TCGAGGAGTAGCTGTGTGGT 60.251 55.000 0.00 0.00 0.00 4.16
453 461 0.603569 CGAGGAGTAGCTGTGTGGTT 59.396 55.000 0.00 0.00 0.00 3.67
454 462 1.402984 CGAGGAGTAGCTGTGTGGTTC 60.403 57.143 0.00 0.00 0.00 3.62
455 463 1.896465 GAGGAGTAGCTGTGTGGTTCT 59.104 52.381 0.00 0.00 0.00 3.01
456 464 1.620819 AGGAGTAGCTGTGTGGTTCTG 59.379 52.381 0.00 0.00 0.00 3.02
457 465 1.344763 GGAGTAGCTGTGTGGTTCTGT 59.655 52.381 0.00 0.00 0.00 3.41
458 466 2.561419 GGAGTAGCTGTGTGGTTCTGTA 59.439 50.000 0.00 0.00 0.00 2.74
459 467 3.006537 GGAGTAGCTGTGTGGTTCTGTAA 59.993 47.826 0.00 0.00 0.00 2.41
460 468 4.238514 GAGTAGCTGTGTGGTTCTGTAAG 58.761 47.826 0.00 0.00 0.00 2.34
461 469 3.895656 AGTAGCTGTGTGGTTCTGTAAGA 59.104 43.478 0.00 0.00 44.68 2.10
620 628 2.344592 TGGGGGAACTTTCTGCTCTTA 58.655 47.619 0.00 0.00 0.00 2.10
628 636 6.072948 GGGAACTTTCTGCTCTTAACTTCTTC 60.073 42.308 0.00 0.00 0.00 2.87
637 645 5.891551 TGCTCTTAACTTCTTCAGGGTTTTT 59.108 36.000 0.00 0.00 0.00 1.94
654 662 7.170828 CAGGGTTTTTAGTTTTGCTGGTATTTC 59.829 37.037 0.00 0.00 0.00 2.17
705 715 4.002982 TCTTCGGTCCATGTTCTGATTTG 58.997 43.478 0.00 0.00 0.00 2.32
793 803 3.673809 GTCGATTGTAGTGTGTGAAGGAC 59.326 47.826 0.00 0.00 0.00 3.85
803 813 3.940852 GTGTGTGAAGGACATGCATGATA 59.059 43.478 32.75 4.90 36.78 2.15
821 831 6.344500 CATGATAACTACCAAAGCTGACTCT 58.656 40.000 0.00 0.00 0.00 3.24
824 834 4.965200 AACTACCAAAGCTGACTCTTCT 57.035 40.909 0.00 0.00 0.00 2.85
990 1000 5.036737 GCTGGATTCCGACATAATTTGTTG 58.963 41.667 0.00 0.00 39.18 3.33
995 1005 6.307800 GGATTCCGACATAATTTGTTGTTGTG 59.692 38.462 0.00 0.00 39.18 3.33
1072 1082 6.908825 TGCACTTTTGGTTATATCTTGTGTC 58.091 36.000 0.00 0.00 0.00 3.67
1082 1092 6.987992 GGTTATATCTTGTGTCGGGAACAATA 59.012 38.462 0.00 0.00 40.31 1.90
1092 1102 4.457603 TGTCGGGAACAATATGGAGTTTTG 59.542 41.667 0.00 0.00 34.03 2.44
1250 1261 7.599630 TGTACGTTTTCTCTAACACTGTTTT 57.400 32.000 0.00 0.00 0.00 2.43
1532 1545 4.887655 AGTTTCACCCTTTTAACTCACTGG 59.112 41.667 0.00 0.00 0.00 4.00
1595 1608 5.591472 CCAGAAGATGAAAAGCCATGTATCA 59.409 40.000 0.00 0.00 0.00 2.15
2240 2256 3.433615 GTGGACATCACTGTACTGCTTTC 59.566 47.826 0.00 0.00 42.86 2.62
2267 2283 4.961435 TGTTATTTGCTTGATGATGCGA 57.039 36.364 0.00 0.00 0.00 5.10
2327 2343 9.778741 TGTATAGTGTCATCTCTTCTTTTGTTT 57.221 29.630 0.00 0.00 0.00 2.83
2399 2415 9.353999 TGCATTAGTACGTATCATGATGAATAC 57.646 33.333 18.72 15.39 0.00 1.89
2415 2431 8.039603 TGATGAATACTGGTTGTTGTATGTTC 57.960 34.615 0.00 0.00 30.74 3.18
2458 2474 2.424601 GGAGTTTATGCTGATGCTGCAA 59.575 45.455 6.36 0.00 41.24 4.08
2564 2580 3.911868 ACGGTAAGTGTATTTGTACGCA 58.088 40.909 2.49 0.00 33.21 5.24
2805 2822 6.043243 TGGGATTACTTCTATCATGGAGGTTC 59.957 42.308 0.00 0.00 0.00 3.62
2861 2878 2.098443 GGTTCCGACACTGAAAAAGCAA 59.902 45.455 0.00 0.00 0.00 3.91
3189 3207 1.168714 GTCCCTGCTGATGTTTGTCC 58.831 55.000 0.00 0.00 0.00 4.02
3449 3467 1.277557 CTTGGCTACAGCTCTCCAGTT 59.722 52.381 0.54 0.00 41.70 3.16
3508 3527 5.490139 AATAATCACCTTCAGATGTTGCG 57.510 39.130 0.00 0.00 0.00 4.85
3525 3544 2.695359 TGCGTATTCTGTCCAGTTTCC 58.305 47.619 0.00 0.00 0.00 3.13
3590 3609 4.275936 GCACCCATACCAATGTAAGATGTC 59.724 45.833 0.00 0.00 0.00 3.06
3757 3776 4.511617 TTGCGGTTCATGCTTTTATTGA 57.488 36.364 0.00 0.00 0.00 2.57
4225 4249 1.067516 CCTTGGTCAGTGGTTGCTTTG 59.932 52.381 0.00 0.00 0.00 2.77
4352 4394 9.467258 CCATACTGAAATACAAATAGCAAATGG 57.533 33.333 0.00 0.00 0.00 3.16
4511 4554 4.021544 GTCATTGACCTGGGCAATTTGTTA 60.022 41.667 25.09 6.04 33.93 2.41
5174 5218 9.672673 ATGTACTGCTTTGAACTAGTCATAAAT 57.327 29.630 0.00 0.00 35.70 1.40
5183 5227 6.573434 TGAACTAGTCATAAATCGAGCATGT 58.427 36.000 0.00 0.00 0.00 3.21
5184 5228 7.712797 TGAACTAGTCATAAATCGAGCATGTA 58.287 34.615 0.00 0.00 0.00 2.29
5685 5766 5.470098 TGTTGATTTCTTACTCTGAACCAGC 59.530 40.000 0.00 0.00 0.00 4.85
5707 5788 6.038714 CAGCTGATGGTTCTATTACTTTTCCC 59.961 42.308 8.42 0.00 0.00 3.97
5714 5795 5.589050 GGTTCTATTACTTTTCCCGCTGAAT 59.411 40.000 0.00 0.00 31.67 2.57
5980 6061 6.736519 GCAATAACATCTTGCCATATCTTGCA 60.737 38.462 0.00 0.00 42.47 4.08
6069 6150 8.967218 CCATTACATTGAACTTTGTTACACTTG 58.033 33.333 0.00 0.00 0.00 3.16
6225 6306 5.491070 TCTGTAGCTCTGTATTTGCATGTT 58.509 37.500 0.00 0.00 0.00 2.71
6300 6384 6.005198 TCCATATGAATCATAATGCTGTGCA 58.995 36.000 7.07 0.00 44.86 4.57
6323 6407 7.536964 TGCACTGTTAAATGAAAATGATACACG 59.463 33.333 0.00 0.00 0.00 4.49
6456 6555 5.764686 TCAGTAATGTTGTGTTTCTGCTCAT 59.235 36.000 0.00 0.00 0.00 2.90
6633 6732 4.458989 TGACACTGCTTCAACAAAACTTCT 59.541 37.500 0.00 0.00 0.00 2.85
6716 6821 2.967201 TGAAGGTGACCGAGTTTTCCTA 59.033 45.455 0.00 0.00 0.00 2.94
6738 6843 9.280456 TCCTAAAATAGAGGAACCACTATTCTT 57.720 33.333 18.52 16.38 40.25 2.52
6753 6858 5.418840 CACTATTCTTGTAACCCATGCCTTT 59.581 40.000 0.00 0.00 0.00 3.11
6757 6862 4.016444 TCTTGTAACCCATGCCTTTCATC 58.984 43.478 0.00 0.00 31.79 2.92
7034 7356 7.813148 TGACGAGGTCAGTATTTTCTTCTTAAG 59.187 37.037 0.00 0.00 37.67 1.85
7064 7387 9.457110 CACTAGTTCTGTCAAGTATAGCTAATG 57.543 37.037 0.00 0.00 0.00 1.90
7102 7425 7.335627 ACAGTCGTATTTGATCCCTTGATTTA 58.664 34.615 0.00 0.00 0.00 1.40
7109 7433 9.066892 GTATTTGATCCCTTGATTTAGCATGTA 57.933 33.333 0.00 0.00 0.00 2.29
7195 7519 9.075678 CTTTAGATAATACTCCCTCCGTTTCTA 57.924 37.037 0.00 0.00 0.00 2.10
7343 8085 4.591321 TTTAGGAACGGAGGGAGTACTA 57.409 45.455 0.00 0.00 0.00 1.82
7518 8268 7.555965 ACACAGTACATGCTATGTTCAGATTA 58.444 34.615 7.02 0.00 41.63 1.75
7627 8377 8.208718 TGCTTAAGTTCATGTACCATTATGTC 57.791 34.615 4.02 0.00 0.00 3.06
7635 8385 7.004555 TCATGTACCATTATGTCCAGTATCC 57.995 40.000 0.00 0.00 0.00 2.59
7694 8444 8.671987 AGTTCATGCACTATTATATACTCCCT 57.328 34.615 0.00 0.00 0.00 4.20
7695 8445 8.754080 AGTTCATGCACTATTATATACTCCCTC 58.246 37.037 0.00 0.00 0.00 4.30
7696 8446 7.661536 TCATGCACTATTATATACTCCCTCC 57.338 40.000 0.00 0.00 0.00 4.30
7697 8447 7.189087 TCATGCACTATTATATACTCCCTCCA 58.811 38.462 0.00 0.00 0.00 3.86
7698 8448 7.846311 TCATGCACTATTATATACTCCCTCCAT 59.154 37.037 0.00 0.00 0.00 3.41
7699 8449 7.661536 TGCACTATTATATACTCCCTCCATC 57.338 40.000 0.00 0.00 0.00 3.51
7700 8450 6.611642 TGCACTATTATATACTCCCTCCATCC 59.388 42.308 0.00 0.00 0.00 3.51
7701 8451 6.611642 GCACTATTATATACTCCCTCCATCCA 59.388 42.308 0.00 0.00 0.00 3.41
7702 8452 7.125811 GCACTATTATATACTCCCTCCATCCAA 59.874 40.741 0.00 0.00 0.00 3.53
7703 8453 9.046846 CACTATTATATACTCCCTCCATCCAAA 57.953 37.037 0.00 0.00 0.00 3.28
7704 8454 9.629649 ACTATTATATACTCCCTCCATCCAAAA 57.370 33.333 0.00 0.00 0.00 2.44
7723 8473 4.861102 AAAAAGCTTGTCTCTTGGATGG 57.139 40.909 0.00 0.00 0.00 3.51
7724 8474 3.795688 AAAGCTTGTCTCTTGGATGGA 57.204 42.857 0.00 0.00 0.00 3.41
7725 8475 4.313020 AAAGCTTGTCTCTTGGATGGAT 57.687 40.909 0.00 0.00 0.00 3.41
7726 8476 3.278668 AGCTTGTCTCTTGGATGGATG 57.721 47.619 0.00 0.00 0.00 3.51
7727 8477 2.842496 AGCTTGTCTCTTGGATGGATGA 59.158 45.455 0.00 0.00 0.00 2.92
7728 8478 3.265221 AGCTTGTCTCTTGGATGGATGAA 59.735 43.478 0.00 0.00 0.00 2.57
7729 8479 4.079901 AGCTTGTCTCTTGGATGGATGAAT 60.080 41.667 0.00 0.00 0.00 2.57
7730 8480 4.275443 GCTTGTCTCTTGGATGGATGAATC 59.725 45.833 0.00 0.00 0.00 2.52
7731 8481 5.682659 CTTGTCTCTTGGATGGATGAATCT 58.317 41.667 0.00 0.00 0.00 2.40
7732 8482 6.687393 GCTTGTCTCTTGGATGGATGAATCTA 60.687 42.308 0.00 0.00 0.00 1.98
7733 8483 6.416631 TGTCTCTTGGATGGATGAATCTAG 57.583 41.667 0.00 0.00 0.00 2.43
7734 8484 5.221601 TGTCTCTTGGATGGATGAATCTAGC 60.222 44.000 0.00 0.00 0.00 3.42
7735 8485 4.903649 TCTCTTGGATGGATGAATCTAGCA 59.096 41.667 0.00 0.00 0.00 3.49
7736 8486 4.965814 TCTTGGATGGATGAATCTAGCAC 58.034 43.478 0.00 0.00 0.00 4.40
7737 8487 3.777106 TGGATGGATGAATCTAGCACC 57.223 47.619 0.00 0.00 0.00 5.01
7738 8488 3.047857 TGGATGGATGAATCTAGCACCA 58.952 45.455 0.00 0.00 0.00 4.17
7739 8489 3.459227 TGGATGGATGAATCTAGCACCAA 59.541 43.478 0.00 0.00 0.00 3.67
7740 8490 4.070716 GGATGGATGAATCTAGCACCAAG 58.929 47.826 0.00 0.00 0.00 3.61
7741 8491 4.445448 GGATGGATGAATCTAGCACCAAGT 60.445 45.833 0.00 0.00 0.00 3.16
7742 8492 4.574674 TGGATGAATCTAGCACCAAGTT 57.425 40.909 0.00 0.00 0.00 2.66
7743 8493 5.692115 TGGATGAATCTAGCACCAAGTTA 57.308 39.130 0.00 0.00 0.00 2.24
7744 8494 5.674525 TGGATGAATCTAGCACCAAGTTAG 58.325 41.667 0.00 0.00 32.79 2.34
7745 8495 5.189736 TGGATGAATCTAGCACCAAGTTAGT 59.810 40.000 0.00 0.00 33.25 2.24
7746 8496 5.525378 GGATGAATCTAGCACCAAGTTAGTG 59.475 44.000 0.00 0.00 38.30 2.74
7747 8497 5.483685 TGAATCTAGCACCAAGTTAGTGT 57.516 39.130 3.37 0.00 37.56 3.55
7748 8498 5.865085 TGAATCTAGCACCAAGTTAGTGTT 58.135 37.500 3.37 0.00 37.56 3.32
7749 8499 6.999950 TGAATCTAGCACCAAGTTAGTGTTA 58.000 36.000 3.37 0.99 37.56 2.41
7750 8500 7.097192 TGAATCTAGCACCAAGTTAGTGTTAG 58.903 38.462 15.74 15.74 45.27 2.34
7752 8502 6.852420 TCTAGCACCAAGTTAGTGTTAGAT 57.148 37.500 18.99 0.00 46.54 1.98
7753 8503 7.949690 TCTAGCACCAAGTTAGTGTTAGATA 57.050 36.000 18.99 4.07 46.54 1.98
7754 8504 7.769220 TCTAGCACCAAGTTAGTGTTAGATAC 58.231 38.462 18.99 0.00 46.54 2.24
7755 8505 6.354794 AGCACCAAGTTAGTGTTAGATACA 57.645 37.500 3.37 0.00 37.56 2.29
7756 8506 6.947464 AGCACCAAGTTAGTGTTAGATACAT 58.053 36.000 3.37 0.00 39.39 2.29
7757 8507 7.042335 AGCACCAAGTTAGTGTTAGATACATC 58.958 38.462 3.37 0.00 39.39 3.06
7758 8508 6.258068 GCACCAAGTTAGTGTTAGATACATCC 59.742 42.308 3.37 0.00 39.39 3.51
7759 8509 7.327975 CACCAAGTTAGTGTTAGATACATCCA 58.672 38.462 0.00 0.00 39.39 3.41
7760 8510 7.987458 CACCAAGTTAGTGTTAGATACATCCAT 59.013 37.037 0.00 0.00 39.39 3.41
7761 8511 8.548877 ACCAAGTTAGTGTTAGATACATCCATT 58.451 33.333 0.00 0.00 39.39 3.16
7762 8512 9.396022 CCAAGTTAGTGTTAGATACATCCATTT 57.604 33.333 0.00 0.00 39.39 2.32
7769 8519 9.911788 AGTGTTAGATACATCCATTTGAAAGAT 57.088 29.630 0.00 0.00 39.39 2.40
7770 8520 9.941664 GTGTTAGATACATCCATTTGAAAGATG 57.058 33.333 5.83 5.83 42.49 2.90
7771 8521 9.904198 TGTTAGATACATCCATTTGAAAGATGA 57.096 29.630 12.37 0.00 39.84 2.92
7773 8523 9.565090 TTAGATACATCCATTTGAAAGATGAGG 57.435 33.333 12.37 0.61 39.84 3.86
7774 8524 7.580910 AGATACATCCATTTGAAAGATGAGGT 58.419 34.615 12.37 5.70 39.84 3.85
7775 8525 8.057623 AGATACATCCATTTGAAAGATGAGGTT 58.942 33.333 12.37 0.00 39.84 3.50
7776 8526 6.276832 ACATCCATTTGAAAGATGAGGTTG 57.723 37.500 12.37 4.35 39.84 3.77
7777 8527 5.186409 ACATCCATTTGAAAGATGAGGTTGG 59.814 40.000 12.37 0.00 39.84 3.77
7778 8528 4.088634 TCCATTTGAAAGATGAGGTTGGG 58.911 43.478 0.00 0.00 0.00 4.12
7779 8529 4.088634 CCATTTGAAAGATGAGGTTGGGA 58.911 43.478 0.00 0.00 0.00 4.37
7780 8530 4.082026 CCATTTGAAAGATGAGGTTGGGAC 60.082 45.833 0.00 0.00 0.00 4.46
7781 8531 3.874383 TTGAAAGATGAGGTTGGGACA 57.126 42.857 0.00 0.00 0.00 4.02
7793 8543 3.811031 TGGGACAAGCTTTTTCGGA 57.189 47.368 0.00 0.00 31.92 4.55
7794 8544 1.314730 TGGGACAAGCTTTTTCGGAC 58.685 50.000 0.00 0.00 31.92 4.79
7795 8545 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
7796 8546 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
7797 8547 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
7798 8548 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
7799 8549 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
7800 8550 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
7801 8551 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
7802 8552 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
8000 8752 5.748152 GCAAATTGGCTATATCTTTTCGCAA 59.252 36.000 0.00 0.00 0.00 4.85
8001 8753 6.074676 GCAAATTGGCTATATCTTTTCGCAAG 60.075 38.462 0.00 0.00 0.00 4.01
8002 8754 6.699575 AATTGGCTATATCTTTTCGCAAGT 57.300 33.333 0.00 0.00 39.48 3.16
8003 8755 7.801716 AATTGGCTATATCTTTTCGCAAGTA 57.198 32.000 0.00 0.00 39.48 2.24
8004 8756 6.598753 TTGGCTATATCTTTTCGCAAGTAC 57.401 37.500 0.00 0.00 39.48 2.73
8005 8757 5.914033 TGGCTATATCTTTTCGCAAGTACT 58.086 37.500 0.00 0.00 39.48 2.73
8006 8758 5.983720 TGGCTATATCTTTTCGCAAGTACTC 59.016 40.000 0.00 0.00 39.48 2.59
8007 8759 5.405873 GGCTATATCTTTTCGCAAGTACTCC 59.594 44.000 0.00 0.00 39.48 3.85
8008 8760 5.405873 GCTATATCTTTTCGCAAGTACTCCC 59.594 44.000 0.00 0.00 39.48 4.30
8009 8761 3.983044 ATCTTTTCGCAAGTACTCCCT 57.017 42.857 0.00 0.00 39.48 4.20
8010 8762 3.314541 TCTTTTCGCAAGTACTCCCTC 57.685 47.619 0.00 0.00 39.48 4.30
8011 8763 2.028385 TCTTTTCGCAAGTACTCCCTCC 60.028 50.000 0.00 0.00 39.48 4.30
8012 8764 0.245539 TTTCGCAAGTACTCCCTCCG 59.754 55.000 0.00 0.00 39.48 4.63
8013 8765 0.896940 TTCGCAAGTACTCCCTCCGT 60.897 55.000 0.00 0.00 39.48 4.69
8014 8766 0.896940 TCGCAAGTACTCCCTCCGTT 60.897 55.000 0.00 0.00 39.48 4.44
8015 8767 0.458025 CGCAAGTACTCCCTCCGTTC 60.458 60.000 0.00 0.00 0.00 3.95
8016 8768 0.108281 GCAAGTACTCCCTCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
8017 8769 1.263356 CAAGTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
8018 8770 1.621814 CAAGTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
8019 8771 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
8020 8772 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
8021 8773 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
8022 8774 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
8023 8775 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
8024 8776 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
8025 8777 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
8026 8778 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
8027 8779 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
8028 8780 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
8029 8781 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
8030 8782 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
8031 8783 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
8032 8784 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
8033 8785 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
8034 8786 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
8035 8787 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
8036 8788 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
8037 8789 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
8038 8790 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
8039 8791 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
8040 8792 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
8041 8793 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
8042 8794 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
8043 8795 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
8044 8796 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
8045 8797 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
8046 8798 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
8047 8799 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
8048 8800 6.687081 TGACCCAACTTTGTACTAACTTTG 57.313 37.500 0.00 0.00 0.00 2.77
8049 8801 6.181908 TGACCCAACTTTGTACTAACTTTGT 58.818 36.000 0.00 0.00 0.00 2.83
8050 8802 7.337167 TGACCCAACTTTGTACTAACTTTGTA 58.663 34.615 0.00 0.00 0.00 2.41
8051 8803 7.280652 TGACCCAACTTTGTACTAACTTTGTAC 59.719 37.037 6.58 6.58 40.27 2.90
8052 8804 7.341030 ACCCAACTTTGTACTAACTTTGTACT 58.659 34.615 12.73 0.00 40.44 2.73
8053 8805 7.496920 ACCCAACTTTGTACTAACTTTGTACTC 59.503 37.037 12.73 0.00 40.44 2.59
8054 8806 7.041576 CCCAACTTTGTACTAACTTTGTACTCC 60.042 40.741 12.73 0.00 40.44 3.85
8055 8807 7.041576 CCAACTTTGTACTAACTTTGTACTCCC 60.042 40.741 12.73 0.00 40.44 4.30
8056 8808 7.370905 ACTTTGTACTAACTTTGTACTCCCT 57.629 36.000 12.73 0.00 40.44 4.20
8057 8809 7.440198 ACTTTGTACTAACTTTGTACTCCCTC 58.560 38.462 12.73 0.00 40.44 4.30
8058 8810 5.990120 TGTACTAACTTTGTACTCCCTCC 57.010 43.478 12.73 0.00 40.44 4.30
8059 8811 4.460382 TGTACTAACTTTGTACTCCCTCCG 59.540 45.833 12.73 0.00 40.44 4.63
8060 8812 3.504375 ACTAACTTTGTACTCCCTCCGT 58.496 45.455 0.00 0.00 0.00 4.69
8061 8813 3.509184 ACTAACTTTGTACTCCCTCCGTC 59.491 47.826 0.00 0.00 0.00 4.79
8062 8814 1.264295 ACTTTGTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
8063 8815 0.172803 CTTTGTACTCCCTCCGTCCG 59.827 60.000 0.00 0.00 0.00 4.79
8064 8816 1.252904 TTTGTACTCCCTCCGTCCGG 61.253 60.000 0.00 0.00 0.00 5.14
8065 8817 2.141011 TTGTACTCCCTCCGTCCGGA 62.141 60.000 0.00 0.00 42.90 5.14
8066 8818 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
8067 8819 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
8068 8820 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
8069 8821 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
8070 8822 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
8071 8823 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
8072 8824 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
8073 8825 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
8074 8826 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
8075 8827 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
8076 8828 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
8077 8829 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
8078 8830 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
8080 8832 3.681593 TCCGGAAATACTTGTCGGAAA 57.318 42.857 0.00 0.00 45.40 3.13
8081 8833 4.005487 TCCGGAAATACTTGTCGGAAAA 57.995 40.909 0.00 0.00 45.40 2.29
8082 8834 4.387598 TCCGGAAATACTTGTCGGAAAAA 58.612 39.130 0.00 0.00 45.40 1.94
8083 8835 5.005094 TCCGGAAATACTTGTCGGAAAAAT 58.995 37.500 0.00 0.00 45.40 1.82
8084 8836 5.092781 CCGGAAATACTTGTCGGAAAAATG 58.907 41.667 0.00 0.00 42.94 2.32
8085 8837 5.092781 CGGAAATACTTGTCGGAAAAATGG 58.907 41.667 0.00 0.00 0.00 3.16
8086 8838 5.106475 CGGAAATACTTGTCGGAAAAATGGA 60.106 40.000 0.00 0.00 0.00 3.41
8087 8839 6.404293 CGGAAATACTTGTCGGAAAAATGGAT 60.404 38.462 0.00 0.00 0.00 3.41
8088 8840 6.751888 GGAAATACTTGTCGGAAAAATGGATG 59.248 38.462 0.00 0.00 0.00 3.51
8089 8841 6.834168 AATACTTGTCGGAAAAATGGATGT 57.166 33.333 0.00 0.00 0.00 3.06
8090 8842 7.931578 AATACTTGTCGGAAAAATGGATGTA 57.068 32.000 0.00 0.00 0.00 2.29
8091 8843 8.519799 AATACTTGTCGGAAAAATGGATGTAT 57.480 30.769 0.00 0.00 0.00 2.29
8092 8844 6.436843 ACTTGTCGGAAAAATGGATGTATC 57.563 37.500 0.00 0.00 0.00 2.24
8093 8845 6.180472 ACTTGTCGGAAAAATGGATGTATCT 58.820 36.000 0.00 0.00 0.00 1.98
8094 8846 7.335627 ACTTGTCGGAAAAATGGATGTATCTA 58.664 34.615 0.00 0.00 0.00 1.98
8095 8847 7.495934 ACTTGTCGGAAAAATGGATGTATCTAG 59.504 37.037 0.00 0.00 0.00 2.43
8096 8848 7.119709 TGTCGGAAAAATGGATGTATCTAGA 57.880 36.000 0.00 0.00 0.00 2.43
8097 8849 6.984474 TGTCGGAAAAATGGATGTATCTAGAC 59.016 38.462 0.00 0.00 0.00 2.59
8098 8850 6.144080 GTCGGAAAAATGGATGTATCTAGACG 59.856 42.308 0.00 0.00 0.00 4.18
8099 8851 5.983720 CGGAAAAATGGATGTATCTAGACGT 59.016 40.000 0.00 0.00 0.00 4.34
8100 8852 7.013559 TCGGAAAAATGGATGTATCTAGACGTA 59.986 37.037 0.00 0.00 0.00 3.57
8101 8853 7.813148 CGGAAAAATGGATGTATCTAGACGTAT 59.187 37.037 0.00 0.00 0.00 3.06
8102 8854 9.141400 GGAAAAATGGATGTATCTAGACGTATC 57.859 37.037 0.00 0.00 0.00 2.24
8103 8855 9.141400 GAAAAATGGATGTATCTAGACGTATCC 57.859 37.037 17.79 17.79 35.72 2.59
8104 8856 7.776618 AAATGGATGTATCTAGACGTATCCA 57.223 36.000 24.55 24.55 45.58 3.41
8105 8857 7.397892 AATGGATGTATCTAGACGTATCCAG 57.602 40.000 25.52 0.00 44.96 3.86
8106 8858 5.877491 TGGATGTATCTAGACGTATCCAGT 58.123 41.667 21.14 0.00 39.17 4.00
8107 8859 6.304624 TGGATGTATCTAGACGTATCCAGTT 58.695 40.000 21.14 0.00 39.17 3.16
8108 8860 6.776116 TGGATGTATCTAGACGTATCCAGTTT 59.224 38.462 21.14 0.00 39.17 2.66
8109 8861 7.287005 TGGATGTATCTAGACGTATCCAGTTTT 59.713 37.037 21.14 0.00 39.17 2.43
8110 8862 8.790718 GGATGTATCTAGACGTATCCAGTTTTA 58.209 37.037 18.94 0.00 35.35 1.52
8111 8863 9.828852 GATGTATCTAGACGTATCCAGTTTTAG 57.171 37.037 0.00 0.00 0.00 1.85
8112 8864 8.969260 TGTATCTAGACGTATCCAGTTTTAGA 57.031 34.615 0.00 0.00 0.00 2.10
8113 8865 9.570468 TGTATCTAGACGTATCCAGTTTTAGAT 57.430 33.333 0.00 0.00 35.27 1.98
8116 8868 8.969260 TCTAGACGTATCCAGTTTTAGATACA 57.031 34.615 9.96 0.00 43.27 2.29
8117 8869 9.570468 TCTAGACGTATCCAGTTTTAGATACAT 57.430 33.333 9.96 0.00 43.27 2.29
8118 8870 9.828852 CTAGACGTATCCAGTTTTAGATACATC 57.171 37.037 9.96 4.95 43.27 3.06
8119 8871 7.659186 AGACGTATCCAGTTTTAGATACATCC 58.341 38.462 9.96 0.43 43.27 3.51
8120 8872 7.287005 AGACGTATCCAGTTTTAGATACATCCA 59.713 37.037 9.96 0.00 43.27 3.41
8121 8873 7.963532 ACGTATCCAGTTTTAGATACATCCAT 58.036 34.615 9.96 0.00 43.27 3.41
8122 8874 8.429641 ACGTATCCAGTTTTAGATACATCCATT 58.570 33.333 9.96 0.00 43.27 3.16
8123 8875 9.273016 CGTATCCAGTTTTAGATACATCCATTT 57.727 33.333 9.96 0.00 43.27 2.32
8138 8890 7.042797 ACATCCATTTTTATCCATTTCTCCG 57.957 36.000 0.00 0.00 0.00 4.63
8139 8891 6.833416 ACATCCATTTTTATCCATTTCTCCGA 59.167 34.615 0.00 0.00 0.00 4.55
8140 8892 6.693315 TCCATTTTTATCCATTTCTCCGAC 57.307 37.500 0.00 0.00 0.00 4.79
8141 8893 6.184068 TCCATTTTTATCCATTTCTCCGACA 58.816 36.000 0.00 0.00 0.00 4.35
8142 8894 6.661377 TCCATTTTTATCCATTTCTCCGACAA 59.339 34.615 0.00 0.00 0.00 3.18
8143 8895 6.974622 CCATTTTTATCCATTTCTCCGACAAG 59.025 38.462 0.00 0.00 0.00 3.16
8144 8896 7.362920 CCATTTTTATCCATTTCTCCGACAAGT 60.363 37.037 0.00 0.00 0.00 3.16
8145 8897 8.673711 CATTTTTATCCATTTCTCCGACAAGTA 58.326 33.333 0.00 0.00 0.00 2.24
8146 8898 8.801882 TTTTTATCCATTTCTCCGACAAGTAT 57.198 30.769 0.00 0.00 0.00 2.12
8147 8899 8.801882 TTTTATCCATTTCTCCGACAAGTATT 57.198 30.769 0.00 0.00 0.00 1.89
8148 8900 8.801882 TTTATCCATTTCTCCGACAAGTATTT 57.198 30.769 0.00 0.00 0.00 1.40
8149 8901 9.893634 TTTATCCATTTCTCCGACAAGTATTTA 57.106 29.630 0.00 0.00 0.00 1.40
8152 8904 9.712305 ATCCATTTCTCCGACAAGTATTTATAG 57.288 33.333 0.00 0.00 0.00 1.31
8153 8905 8.920174 TCCATTTCTCCGACAAGTATTTATAGA 58.080 33.333 0.00 0.00 0.00 1.98
8154 8906 8.979574 CCATTTCTCCGACAAGTATTTATAGAC 58.020 37.037 0.00 0.00 0.00 2.59
8155 8907 8.691727 CATTTCTCCGACAAGTATTTATAGACG 58.308 37.037 0.00 0.00 0.00 4.18
8156 8908 6.309712 TCTCCGACAAGTATTTATAGACGG 57.690 41.667 0.00 0.00 39.30 4.79
8157 8909 6.057533 TCTCCGACAAGTATTTATAGACGGA 58.942 40.000 0.00 0.00 43.35 4.69
8158 8910 6.309712 TCCGACAAGTATTTATAGACGGAG 57.690 41.667 0.00 0.00 41.32 4.63
8159 8911 5.240183 TCCGACAAGTATTTATAGACGGAGG 59.760 44.000 0.00 0.00 41.32 4.30
8160 8912 5.458891 CGACAAGTATTTATAGACGGAGGG 58.541 45.833 0.00 0.00 0.00 4.30
8161 8913 5.240183 CGACAAGTATTTATAGACGGAGGGA 59.760 44.000 0.00 0.00 0.00 4.20
8162 8914 6.568081 CGACAAGTATTTATAGACGGAGGGAG 60.568 46.154 0.00 0.00 0.00 4.30
8163 8915 6.134754 ACAAGTATTTATAGACGGAGGGAGT 58.865 40.000 0.00 0.00 0.00 3.85
8164 8916 7.293073 ACAAGTATTTATAGACGGAGGGAGTA 58.707 38.462 0.00 0.00 0.00 2.59
8165 8917 7.447853 ACAAGTATTTATAGACGGAGGGAGTAG 59.552 40.741 0.00 0.00 0.00 2.57
8166 8918 7.089106 AGTATTTATAGACGGAGGGAGTAGT 57.911 40.000 0.00 0.00 0.00 2.73
8167 8919 8.212259 AGTATTTATAGACGGAGGGAGTAGTA 57.788 38.462 0.00 0.00 0.00 1.82
8168 8920 8.100164 AGTATTTATAGACGGAGGGAGTAGTAC 58.900 40.741 0.00 0.00 0.00 2.73
8169 8921 5.894298 TTATAGACGGAGGGAGTAGTACA 57.106 43.478 2.52 0.00 0.00 2.90
8170 8922 4.785346 ATAGACGGAGGGAGTAGTACAA 57.215 45.455 2.52 0.00 0.00 2.41
8171 8923 3.446442 AGACGGAGGGAGTAGTACAAA 57.554 47.619 2.52 0.00 0.00 2.83
8172 8924 3.354467 AGACGGAGGGAGTAGTACAAAG 58.646 50.000 2.52 0.00 0.00 2.77
8173 8925 3.087781 GACGGAGGGAGTAGTACAAAGT 58.912 50.000 2.52 0.00 0.00 2.66
8174 8926 3.504375 ACGGAGGGAGTAGTACAAAGTT 58.496 45.455 2.52 0.00 0.00 2.66
8175 8927 3.257624 ACGGAGGGAGTAGTACAAAGTTG 59.742 47.826 2.52 0.00 0.00 3.16
8176 8928 3.368116 CGGAGGGAGTAGTACAAAGTTGG 60.368 52.174 2.52 0.00 0.00 3.77
8177 8929 3.055312 GGAGGGAGTAGTACAAAGTTGGG 60.055 52.174 2.52 0.00 0.00 4.12
8178 8930 3.581770 GAGGGAGTAGTACAAAGTTGGGT 59.418 47.826 2.52 0.00 0.00 4.51
8179 8931 3.581770 AGGGAGTAGTACAAAGTTGGGTC 59.418 47.826 2.52 0.00 0.00 4.46
8180 8932 3.325716 GGGAGTAGTACAAAGTTGGGTCA 59.674 47.826 2.52 0.00 0.00 4.02
8181 8933 4.019591 GGGAGTAGTACAAAGTTGGGTCAT 60.020 45.833 2.52 0.00 0.00 3.06
8182 8934 5.176592 GGAGTAGTACAAAGTTGGGTCATC 58.823 45.833 2.52 0.00 0.00 2.92
8183 8935 5.046520 GGAGTAGTACAAAGTTGGGTCATCT 60.047 44.000 2.52 0.00 0.00 2.90
8184 8936 6.154021 GGAGTAGTACAAAGTTGGGTCATCTA 59.846 42.308 2.52 0.00 0.00 1.98
8185 8937 7.147707 GGAGTAGTACAAAGTTGGGTCATCTAT 60.148 40.741 2.52 0.00 0.00 1.98
8186 8938 8.147244 AGTAGTACAAAGTTGGGTCATCTATT 57.853 34.615 2.52 0.00 0.00 1.73
8187 8939 8.603304 AGTAGTACAAAGTTGGGTCATCTATTT 58.397 33.333 2.52 0.00 0.00 1.40
8188 8940 9.227777 GTAGTACAAAGTTGGGTCATCTATTTT 57.772 33.333 0.00 0.00 0.00 1.82
8189 8941 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
8190 8942 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
8191 8943 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
8192 8944 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
8193 8945 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
8194 8946 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
8195 8947 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
8196 8948 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
8197 8949 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
8198 8950 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
8199 8951 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
8495 9247 4.873827 TCTGGTCAAACAGTACTGTCAAAC 59.126 41.667 28.04 22.58 44.13 2.93
8636 9388 1.346395 ACTGCCGTTCCATGTAGTGAA 59.654 47.619 0.00 0.00 0.00 3.18
8638 9390 2.147958 TGCCGTTCCATGTAGTGAAAC 58.852 47.619 0.00 0.00 0.00 2.78
8839 9594 0.259938 AATGTGGAATCTCCCCTGGC 59.740 55.000 0.00 0.00 35.03 4.85
8843 9598 0.984961 TGGAATCTCCCCTGGCTGAG 60.985 60.000 5.39 5.39 35.03 3.35
8899 9654 3.774336 TGGATCCGGGGGTAGCCT 61.774 66.667 11.48 0.00 0.00 4.58
9069 9825 2.381911 CATTAGATTGCCCTGCCTTGT 58.618 47.619 0.00 0.00 0.00 3.16
9464 10224 1.774639 TTTTACTCGCTGTGTCCGTC 58.225 50.000 0.00 0.00 0.00 4.79
9468 10228 2.022129 CTCGCTGTGTCCGTCCAAC 61.022 63.158 0.00 0.00 0.00 3.77
9481 10241 5.182380 TGTCCGTCCAACCTATTGATTTTTC 59.818 40.000 0.00 0.00 38.15 2.29
9483 10243 5.646360 TCCGTCCAACCTATTGATTTTTCTC 59.354 40.000 0.00 0.00 38.15 2.87
9530 10291 0.734889 CAGGCCACATGAATCGAACC 59.265 55.000 5.01 0.00 0.00 3.62
9542 10303 1.453155 ATCGAACCTGTGATTGTGGC 58.547 50.000 0.00 0.00 0.00 5.01
9547 10308 1.308069 ACCTGTGATTGTGGCGATGC 61.308 55.000 0.00 0.00 0.00 3.91
9596 10357 7.354025 TGATTAGCATGAACATTTGCAAAAG 57.646 32.000 17.19 14.72 41.35 2.27
9612 10373 6.969993 TGCAAAAGAATAGGGTAACAAGTT 57.030 33.333 0.00 0.00 39.74 2.66
9640 10401 5.628606 GGTCGTTTTACTTCACTAGTCACTC 59.371 44.000 0.00 0.00 38.33 3.51
9641 10402 6.204359 GTCGTTTTACTTCACTAGTCACTCA 58.796 40.000 0.00 0.00 38.33 3.41
9642 10403 6.142002 GTCGTTTTACTTCACTAGTCACTCAC 59.858 42.308 0.00 0.00 38.33 3.51
9643 10404 6.039047 TCGTTTTACTTCACTAGTCACTCACT 59.961 38.462 0.00 0.00 38.33 3.41
9687 10449 8.397906 CACAAATTATTCATACAGATCAACGGT 58.602 33.333 0.00 0.00 0.00 4.83
9698 10460 1.920574 GATCAACGGTGACATCACTCG 59.079 52.381 4.62 14.40 45.73 4.18
9700 10462 1.060713 CAACGGTGACATCACTCGTC 58.939 55.000 20.92 3.43 45.65 4.20
9713 10475 2.354821 TCACTCGTCGATGATGTACTGG 59.645 50.000 7.99 0.00 0.00 4.00
9745 10507 1.738099 CGACCGAGCAGGGACAAAG 60.738 63.158 0.00 0.00 46.96 2.77
9764 10526 1.953017 CCACCACGATCGCCAAAAA 59.047 52.632 16.60 0.00 0.00 1.94
9766 10528 1.467374 CCACCACGATCGCCAAAAATC 60.467 52.381 16.60 0.00 0.00 2.17
9801 10563 1.071567 GTCGAGTACGTGCTTCTGGC 61.072 60.000 7.83 0.00 40.69 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.672996 ACATCACAAGCACCGCCC 60.673 61.111 0.00 0.00 0.00 6.13
1 2 1.308069 ATCACATCACAAGCACCGCC 61.308 55.000 0.00 0.00 0.00 6.13
2 3 0.179181 CATCACATCACAAGCACCGC 60.179 55.000 0.00 0.00 0.00 5.68
3 4 1.135888 CACATCACATCACAAGCACCG 60.136 52.381 0.00 0.00 0.00 4.94
4 5 1.881973 ACACATCACATCACAAGCACC 59.118 47.619 0.00 0.00 0.00 5.01
5 6 3.631145 AACACATCACATCACAAGCAC 57.369 42.857 0.00 0.00 0.00 4.40
6 7 3.243468 CCAAACACATCACATCACAAGCA 60.243 43.478 0.00 0.00 0.00 3.91
7 8 3.311106 CCAAACACATCACATCACAAGC 58.689 45.455 0.00 0.00 0.00 4.01
8 9 3.311106 GCCAAACACATCACATCACAAG 58.689 45.455 0.00 0.00 0.00 3.16
9 10 2.035704 GGCCAAACACATCACATCACAA 59.964 45.455 0.00 0.00 0.00 3.33
10 11 1.612950 GGCCAAACACATCACATCACA 59.387 47.619 0.00 0.00 0.00 3.58
11 12 1.401409 CGGCCAAACACATCACATCAC 60.401 52.381 2.24 0.00 0.00 3.06
12 13 0.880441 CGGCCAAACACATCACATCA 59.120 50.000 2.24 0.00 0.00 3.07
13 14 0.456653 GCGGCCAAACACATCACATC 60.457 55.000 2.24 0.00 0.00 3.06
14 15 1.586028 GCGGCCAAACACATCACAT 59.414 52.632 2.24 0.00 0.00 3.21
335 343 5.575957 CGCATCAATCAACTCAGCTAAAAT 58.424 37.500 0.00 0.00 0.00 1.82
444 452 4.058817 GGTCTTCTTACAGAACCACACAG 58.941 47.826 0.00 0.00 29.89 3.66
445 453 3.452990 TGGTCTTCTTACAGAACCACACA 59.547 43.478 0.00 0.00 29.89 3.72
446 454 4.067972 TGGTCTTCTTACAGAACCACAC 57.932 45.455 0.00 0.00 29.89 3.82
447 455 4.504864 CCATGGTCTTCTTACAGAACCACA 60.505 45.833 2.57 0.00 31.11 4.17
448 456 4.003648 CCATGGTCTTCTTACAGAACCAC 58.996 47.826 2.57 0.00 31.11 4.16
449 457 3.650942 ACCATGGTCTTCTTACAGAACCA 59.349 43.478 13.00 0.77 32.17 3.67
450 458 4.003648 CACCATGGTCTTCTTACAGAACC 58.996 47.826 16.53 0.00 29.89 3.62
451 459 4.003648 CCACCATGGTCTTCTTACAGAAC 58.996 47.826 16.53 0.00 31.35 3.01
452 460 3.009033 CCCACCATGGTCTTCTTACAGAA 59.991 47.826 16.53 0.00 35.17 3.02
453 461 2.571653 CCCACCATGGTCTTCTTACAGA 59.428 50.000 16.53 0.00 35.17 3.41
454 462 2.305927 ACCCACCATGGTCTTCTTACAG 59.694 50.000 16.53 0.00 35.17 2.74
455 463 2.344592 ACCCACCATGGTCTTCTTACA 58.655 47.619 16.53 0.00 35.17 2.41
456 464 3.081804 CAACCCACCATGGTCTTCTTAC 58.918 50.000 16.53 0.00 37.76 2.34
457 465 2.041081 CCAACCCACCATGGTCTTCTTA 59.959 50.000 16.53 0.00 37.76 2.10
458 466 1.203050 CCAACCCACCATGGTCTTCTT 60.203 52.381 16.53 0.85 37.76 2.52
459 467 0.405585 CCAACCCACCATGGTCTTCT 59.594 55.000 16.53 0.00 37.76 2.85
460 468 1.250840 GCCAACCCACCATGGTCTTC 61.251 60.000 16.53 0.00 37.76 2.87
461 469 1.228862 GCCAACCCACCATGGTCTT 60.229 57.895 16.53 3.62 37.76 3.01
462 470 2.162906 AGCCAACCCACCATGGTCT 61.163 57.895 16.53 4.03 37.76 3.85
463 471 1.978617 CAGCCAACCCACCATGGTC 60.979 63.158 16.53 1.24 37.76 4.02
620 628 6.816640 GCAAAACTAAAAACCCTGAAGAAGTT 59.183 34.615 0.00 0.00 0.00 2.66
628 636 4.400529 ACCAGCAAAACTAAAAACCCTG 57.599 40.909 0.00 0.00 0.00 4.45
637 645 5.830991 ACAACCAGAAATACCAGCAAAACTA 59.169 36.000 0.00 0.00 0.00 2.24
654 662 1.799258 GACCCTGCAAGCACAACCAG 61.799 60.000 0.00 0.00 0.00 4.00
769 779 3.554129 CCTTCACACACTACAATCGACCA 60.554 47.826 0.00 0.00 0.00 4.02
793 803 5.297527 TCAGCTTTGGTAGTTATCATGCATG 59.702 40.000 21.07 21.07 0.00 4.06
803 813 4.965200 AGAAGAGTCAGCTTTGGTAGTT 57.035 40.909 0.00 0.00 0.00 2.24
990 1000 2.548875 TGCCAAAACATCTTGCACAAC 58.451 42.857 0.00 0.00 0.00 3.32
995 1005 3.056607 AGGTACATGCCAAAACATCTTGC 60.057 43.478 0.00 0.00 0.00 4.01
1044 1054 5.582689 AGATATAACCAAAAGTGCAAGCC 57.417 39.130 0.00 0.00 0.00 4.35
1072 1082 5.835113 ATCAAAACTCCATATTGTTCCCG 57.165 39.130 0.00 0.00 0.00 5.14
1250 1261 5.405873 GGAGAAACGGAAAAACAACACAAAA 59.594 36.000 0.00 0.00 0.00 2.44
1532 1545 4.035208 CAGTCCAGGTAACAAAACAGTGAC 59.965 45.833 0.00 0.00 41.41 3.67
1682 1696 3.496884 GTCTCGCAAACTACAACATCCAA 59.503 43.478 0.00 0.00 0.00 3.53
1755 1769 9.334947 CTAAATATCCTCTTCTTTTCAGCATCA 57.665 33.333 0.00 0.00 0.00 3.07
1787 1801 6.655078 AATGGTGCTATAAATTAGCCTTGG 57.345 37.500 2.42 0.00 39.69 3.61
1803 1817 2.827921 AGGACAAAGGATGAAATGGTGC 59.172 45.455 0.00 0.00 0.00 5.01
2036 2050 6.428385 AGTAAATTCATAAGCTGCACAGAC 57.572 37.500 1.02 0.00 0.00 3.51
2240 2256 5.389859 TCATCAAGCAAATAACAACCTGG 57.610 39.130 0.00 0.00 0.00 4.45
2267 2283 8.109634 ACATAATTCATAAGTGGGAGTGTCTTT 58.890 33.333 0.00 0.00 0.00 2.52
2327 2343 5.190726 TGACATGGGTGATAACTTATGGACA 59.809 40.000 0.00 0.00 0.00 4.02
2391 2407 8.039603 TGAACATACAACAACCAGTATTCATC 57.960 34.615 0.00 0.00 0.00 2.92
2392 2408 7.362056 GCTGAACATACAACAACCAGTATTCAT 60.362 37.037 0.00 0.00 0.00 2.57
2399 2415 4.771590 ATGCTGAACATACAACAACCAG 57.228 40.909 0.00 0.00 37.17 4.00
2415 2431 7.041635 TCCCACATAATTCAATTGTATGCTG 57.958 36.000 5.13 5.62 0.00 4.41
2458 2474 3.287222 CTGGCTACTCTAGAGAAGCTGT 58.713 50.000 26.57 6.03 0.00 4.40
2552 2568 9.469239 GTAAAACTAAGATGTGCGTACAAATAC 57.531 33.333 11.22 3.12 40.84 1.89
2564 2580 7.170998 CCTCGAACAGTTGTAAAACTAAGATGT 59.829 37.037 0.00 0.00 0.00 3.06
2805 2822 6.038825 TGGGGCAAATATGATTGTAGTAAACG 59.961 38.462 0.00 0.00 32.80 3.60
2861 2878 3.420482 GCATGTAGGCCCAGGGGT 61.420 66.667 7.91 0.00 37.65 4.95
3330 3348 5.178623 AGTGATACGTTGAATTTTGAGCGAA 59.821 36.000 0.00 0.00 0.00 4.70
3332 3350 4.957971 AGTGATACGTTGAATTTTGAGCG 58.042 39.130 0.00 0.00 0.00 5.03
3508 3527 3.329929 ACCGGAAACTGGACAGAATAC 57.670 47.619 9.46 0.00 0.00 1.89
3525 3544 1.924524 CTACCGTGCAGATGTAAACCG 59.075 52.381 0.00 0.00 0.00 4.44
3590 3609 2.709475 GCATAGCCCGCTTGTTCG 59.291 61.111 0.00 0.00 0.00 3.95
3690 3709 3.855255 TTCAACAGTGGAGAATGACCA 57.145 42.857 0.00 0.00 34.84 4.02
3757 3776 5.591067 TGGAAATTAAAAGGAGTCACGTTGT 59.409 36.000 0.00 0.00 0.00 3.32
3994 4018 1.522258 CCACAAAACTGCAAATGCGAC 59.478 47.619 0.35 0.00 45.83 5.19
4212 4236 4.218417 ACTTAATAGCCAAAGCAACCACTG 59.782 41.667 0.00 0.00 43.56 3.66
4251 4275 3.244946 ACTGTAGCTAGTGTCTCTCCACA 60.245 47.826 0.00 0.00 37.82 4.17
4252 4276 3.127895 CACTGTAGCTAGTGTCTCTCCAC 59.872 52.174 8.27 0.00 42.38 4.02
4556 4599 6.166984 TCTCATAATGAGGGCTAAGAGTTG 57.833 41.667 0.00 0.00 44.39 3.16
4882 4925 3.799366 TCTTAGGTCAAAACTGCGACAA 58.201 40.909 0.00 0.00 33.66 3.18
5001 5045 7.636150 CTGAAAGTGATGGACAGGAATTTAT 57.364 36.000 0.00 0.00 0.00 1.40
5126 5170 6.863126 ACATCTAAACAAATTAAGCAGCACAC 59.137 34.615 0.00 0.00 0.00 3.82
5183 5227 5.551233 AGCTCAAATGTCTACAAAGCAGTA 58.449 37.500 10.65 0.00 0.00 2.74
5184 5228 4.392940 AGCTCAAATGTCTACAAAGCAGT 58.607 39.130 10.65 0.00 0.00 4.40
5685 5766 5.007724 GCGGGAAAAGTAATAGAACCATCAG 59.992 44.000 0.00 0.00 0.00 2.90
5733 5814 2.235155 TGAAGATAGGGTACGCTGCAAA 59.765 45.455 21.79 2.57 0.00 3.68
6069 6150 4.331717 CCAGAATTTTGCTGCAATCCAATC 59.668 41.667 16.77 10.27 32.06 2.67
6300 6384 7.027161 GGCGTGTATCATTTTCATTTAACAGT 58.973 34.615 0.00 0.00 0.00 3.55
6323 6407 7.912250 CACATTCTTAAGACAAATCATACTGGC 59.088 37.037 4.18 0.00 0.00 4.85
6375 6459 6.543465 TGCATAATACACTTTTGGAGATCAGG 59.457 38.462 0.00 0.00 0.00 3.86
6431 6530 5.007626 TGAGCAGAAACACAACATTACTGAC 59.992 40.000 0.00 0.00 0.00 3.51
6456 6555 3.495331 TCAACAATTCAGGCAGCCTAAA 58.505 40.909 15.64 6.55 29.64 1.85
6633 6732 0.510790 CGTGCAATTGTGTCGTAGCA 59.489 50.000 7.40 0.00 0.00 3.49
6691 6796 2.528041 AACTCGGTCACCTTCAACTC 57.472 50.000 0.00 0.00 0.00 3.01
6738 6843 3.737559 AGATGAAAGGCATGGGTTACA 57.262 42.857 0.00 0.00 37.34 2.41
6882 7204 2.301296 CCTACCTCGATCCTGCATTGAT 59.699 50.000 0.00 0.00 0.00 2.57
7034 7356 7.067251 AGCTATACTTGACAGAACTAGTGGTAC 59.933 40.741 0.00 0.00 0.00 3.34
7314 8056 4.161001 TCCCTCCGTTCCTAAATACAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
7518 8268 7.671398 ACCCACAAAAGAGTTATTCATCAGATT 59.329 33.333 0.00 0.00 0.00 2.40
7627 8377 8.034804 TGATATTGTCATGTTATCGGATACTGG 58.965 37.037 0.00 0.00 0.00 4.00
7635 8385 8.684655 GCAAAATGTGATATTGTCATGTTATCG 58.315 33.333 0.00 0.00 39.48 2.92
7702 8452 4.473444 TCCATCCAAGAGACAAGCTTTTT 58.527 39.130 0.00 0.00 0.00 1.94
7703 8453 4.104383 TCCATCCAAGAGACAAGCTTTT 57.896 40.909 0.00 0.00 0.00 2.27
7704 8454 3.795688 TCCATCCAAGAGACAAGCTTT 57.204 42.857 0.00 0.00 0.00 3.51
7705 8455 3.265221 TCATCCATCCAAGAGACAAGCTT 59.735 43.478 0.00 0.00 0.00 3.74
7706 8456 2.842496 TCATCCATCCAAGAGACAAGCT 59.158 45.455 0.00 0.00 0.00 3.74
7707 8457 3.272574 TCATCCATCCAAGAGACAAGC 57.727 47.619 0.00 0.00 0.00 4.01
7708 8458 5.682659 AGATTCATCCATCCAAGAGACAAG 58.317 41.667 0.00 0.00 0.00 3.16
7709 8459 5.705397 AGATTCATCCATCCAAGAGACAA 57.295 39.130 0.00 0.00 0.00 3.18
7710 8460 5.221601 GCTAGATTCATCCATCCAAGAGACA 60.222 44.000 0.00 0.00 0.00 3.41
7711 8461 5.221601 TGCTAGATTCATCCATCCAAGAGAC 60.222 44.000 0.00 0.00 0.00 3.36
7712 8462 4.903649 TGCTAGATTCATCCATCCAAGAGA 59.096 41.667 0.00 0.00 0.00 3.10
7713 8463 4.996122 GTGCTAGATTCATCCATCCAAGAG 59.004 45.833 0.00 0.00 0.00 2.85
7714 8464 4.202398 GGTGCTAGATTCATCCATCCAAGA 60.202 45.833 0.00 0.00 0.00 3.02
7715 8465 4.070716 GGTGCTAGATTCATCCATCCAAG 58.929 47.826 0.00 0.00 0.00 3.61
7716 8466 3.459227 TGGTGCTAGATTCATCCATCCAA 59.541 43.478 0.00 0.00 0.00 3.53
7717 8467 3.047857 TGGTGCTAGATTCATCCATCCA 58.952 45.455 0.00 0.00 0.00 3.41
7718 8468 3.777106 TGGTGCTAGATTCATCCATCC 57.223 47.619 0.00 0.00 0.00 3.51
7719 8469 4.712476 ACTTGGTGCTAGATTCATCCATC 58.288 43.478 0.00 0.00 0.00 3.51
7720 8470 4.785346 ACTTGGTGCTAGATTCATCCAT 57.215 40.909 0.00 0.00 0.00 3.41
7721 8471 4.574674 AACTTGGTGCTAGATTCATCCA 57.425 40.909 0.00 0.00 0.00 3.41
7722 8472 5.525378 CACTAACTTGGTGCTAGATTCATCC 59.475 44.000 0.00 0.00 0.00 3.51
7723 8473 6.109359 ACACTAACTTGGTGCTAGATTCATC 58.891 40.000 5.24 0.00 38.14 2.92
7724 8474 6.054860 ACACTAACTTGGTGCTAGATTCAT 57.945 37.500 5.24 0.00 38.14 2.57
7725 8475 5.483685 ACACTAACTTGGTGCTAGATTCA 57.516 39.130 5.24 0.00 38.14 2.57
7726 8476 7.321153 TCTAACACTAACTTGGTGCTAGATTC 58.679 38.462 12.12 0.00 37.42 2.52
7727 8477 7.241042 TCTAACACTAACTTGGTGCTAGATT 57.759 36.000 12.12 0.68 37.42 2.40
7728 8478 6.852420 TCTAACACTAACTTGGTGCTAGAT 57.148 37.500 12.12 0.00 37.42 1.98
7729 8479 6.852420 ATCTAACACTAACTTGGTGCTAGA 57.148 37.500 16.37 16.37 42.56 2.43
7730 8480 7.544622 TGTATCTAACACTAACTTGGTGCTAG 58.455 38.462 5.24 7.17 38.14 3.42
7731 8481 7.470935 TGTATCTAACACTAACTTGGTGCTA 57.529 36.000 5.24 0.00 38.14 3.49
7732 8482 6.354794 TGTATCTAACACTAACTTGGTGCT 57.645 37.500 5.24 0.00 38.14 4.40
7733 8483 6.258068 GGATGTATCTAACACTAACTTGGTGC 59.742 42.308 5.24 0.00 42.09 5.01
7734 8484 7.327975 TGGATGTATCTAACACTAACTTGGTG 58.672 38.462 3.83 3.83 42.09 4.17
7735 8485 7.490657 TGGATGTATCTAACACTAACTTGGT 57.509 36.000 0.00 0.00 42.09 3.67
7736 8486 8.964476 AATGGATGTATCTAACACTAACTTGG 57.036 34.615 0.00 0.00 42.09 3.61
7743 8493 9.911788 ATCTTTCAAATGGATGTATCTAACACT 57.088 29.630 0.00 0.00 42.09 3.55
7744 8494 9.941664 CATCTTTCAAATGGATGTATCTAACAC 57.058 33.333 0.00 0.00 42.09 3.32
7745 8495 9.904198 TCATCTTTCAAATGGATGTATCTAACA 57.096 29.630 0.00 0.00 43.86 2.41
7747 8497 9.565090 CCTCATCTTTCAAATGGATGTATCTAA 57.435 33.333 0.00 0.00 38.28 2.10
7748 8498 8.717717 ACCTCATCTTTCAAATGGATGTATCTA 58.282 33.333 0.00 0.00 38.28 1.98
7749 8499 7.580910 ACCTCATCTTTCAAATGGATGTATCT 58.419 34.615 0.00 0.00 38.28 1.98
7750 8500 7.814264 ACCTCATCTTTCAAATGGATGTATC 57.186 36.000 0.00 0.00 38.28 2.24
7751 8501 7.069085 CCAACCTCATCTTTCAAATGGATGTAT 59.931 37.037 0.00 0.00 38.28 2.29
7752 8502 6.377996 CCAACCTCATCTTTCAAATGGATGTA 59.622 38.462 0.00 0.00 38.28 2.29
7753 8503 5.186409 CCAACCTCATCTTTCAAATGGATGT 59.814 40.000 0.00 0.00 38.28 3.06
7754 8504 5.394883 CCCAACCTCATCTTTCAAATGGATG 60.395 44.000 0.00 0.00 38.41 3.51
7755 8505 4.713321 CCCAACCTCATCTTTCAAATGGAT 59.287 41.667 0.00 0.00 0.00 3.41
7756 8506 4.088634 CCCAACCTCATCTTTCAAATGGA 58.911 43.478 0.00 0.00 0.00 3.41
7757 8507 4.082026 GTCCCAACCTCATCTTTCAAATGG 60.082 45.833 0.00 0.00 0.00 3.16
7758 8508 4.523943 TGTCCCAACCTCATCTTTCAAATG 59.476 41.667 0.00 0.00 0.00 2.32
7759 8509 4.739793 TGTCCCAACCTCATCTTTCAAAT 58.260 39.130 0.00 0.00 0.00 2.32
7760 8510 4.177537 TGTCCCAACCTCATCTTTCAAA 57.822 40.909 0.00 0.00 0.00 2.69
7761 8511 3.874383 TGTCCCAACCTCATCTTTCAA 57.126 42.857 0.00 0.00 0.00 2.69
7762 8512 3.754965 CTTGTCCCAACCTCATCTTTCA 58.245 45.455 0.00 0.00 0.00 2.69
7763 8513 2.489722 GCTTGTCCCAACCTCATCTTTC 59.510 50.000 0.00 0.00 0.00 2.62
7764 8514 2.108952 AGCTTGTCCCAACCTCATCTTT 59.891 45.455 0.00 0.00 0.00 2.52
7765 8515 1.707427 AGCTTGTCCCAACCTCATCTT 59.293 47.619 0.00 0.00 0.00 2.40
7766 8516 1.366319 AGCTTGTCCCAACCTCATCT 58.634 50.000 0.00 0.00 0.00 2.90
7767 8517 2.206576 AAGCTTGTCCCAACCTCATC 57.793 50.000 0.00 0.00 0.00 2.92
7768 8518 2.683211 AAAGCTTGTCCCAACCTCAT 57.317 45.000 0.00 0.00 0.00 2.90
7769 8519 2.452600 AAAAGCTTGTCCCAACCTCA 57.547 45.000 0.00 0.00 0.00 3.86
7770 8520 2.287608 CGAAAAAGCTTGTCCCAACCTC 60.288 50.000 0.00 0.00 0.00 3.85
7771 8521 1.681264 CGAAAAAGCTTGTCCCAACCT 59.319 47.619 0.00 0.00 0.00 3.50
7772 8522 1.269569 CCGAAAAAGCTTGTCCCAACC 60.270 52.381 0.00 0.00 0.00 3.77
7773 8523 1.679153 TCCGAAAAAGCTTGTCCCAAC 59.321 47.619 0.00 0.00 0.00 3.77
7774 8524 1.679153 GTCCGAAAAAGCTTGTCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
7775 8525 1.314730 GTCCGAAAAAGCTTGTCCCA 58.685 50.000 0.00 0.00 0.00 4.37
7776 8526 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
7777 8527 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
7778 8528 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
7779 8529 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
7780 8530 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
7781 8531 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
7782 8532 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
7783 8533 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
7784 8534 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
7785 8535 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
7786 8536 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
7787 8537 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
7788 8538 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
7789 8539 0.467384 CTAGTACTCCCTCCGTCCGA 59.533 60.000 0.00 0.00 0.00 4.55
7790 8540 0.179936 ACTAGTACTCCCTCCGTCCG 59.820 60.000 0.00 0.00 0.00 4.79
7791 8541 3.327464 AGATACTAGTACTCCCTCCGTCC 59.673 52.174 4.31 0.00 0.00 4.79
7792 8542 4.040217 TCAGATACTAGTACTCCCTCCGTC 59.960 50.000 4.31 0.00 0.00 4.79
7793 8543 3.972638 TCAGATACTAGTACTCCCTCCGT 59.027 47.826 4.31 0.00 0.00 4.69
7794 8544 4.620589 TCAGATACTAGTACTCCCTCCG 57.379 50.000 4.31 0.00 0.00 4.63
7795 8545 6.117488 GCTATCAGATACTAGTACTCCCTCC 58.883 48.000 4.31 0.00 0.00 4.30
7796 8546 6.713276 TGCTATCAGATACTAGTACTCCCTC 58.287 44.000 4.31 0.00 0.00 4.30
7797 8547 6.705664 TGCTATCAGATACTAGTACTCCCT 57.294 41.667 4.31 0.00 0.00 4.20
7798 8548 7.066525 GTCATGCTATCAGATACTAGTACTCCC 59.933 44.444 4.31 0.00 0.00 4.30
7799 8549 7.608376 TGTCATGCTATCAGATACTAGTACTCC 59.392 40.741 4.31 0.00 0.00 3.85
7800 8550 8.554835 TGTCATGCTATCAGATACTAGTACTC 57.445 38.462 4.31 4.69 0.00 2.59
7801 8551 8.926092 TTGTCATGCTATCAGATACTAGTACT 57.074 34.615 4.31 0.00 0.00 2.73
7850 8600 5.591099 ACAACCAAAACAGACAATCACATC 58.409 37.500 0.00 0.00 0.00 3.06
8000 8752 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
8001 8753 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
8002 8754 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
8003 8755 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
8004 8756 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
8005 8757 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
8006 8758 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
8007 8759 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
8008 8760 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
8009 8761 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
8010 8762 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
8011 8763 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
8012 8764 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
8013 8765 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
8014 8766 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
8015 8767 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
8016 8768 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
8017 8769 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
8018 8770 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
8019 8771 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
8020 8772 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
8021 8773 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
8022 8774 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
8023 8775 7.012989 ACAAAGTTAGTACAAAGTTGGGTCATC 59.987 37.037 0.00 0.00 0.00 2.92
8024 8776 6.831868 ACAAAGTTAGTACAAAGTTGGGTCAT 59.168 34.615 0.00 0.00 0.00 3.06
8025 8777 6.181908 ACAAAGTTAGTACAAAGTTGGGTCA 58.818 36.000 0.00 0.00 0.00 4.02
8026 8778 6.688637 ACAAAGTTAGTACAAAGTTGGGTC 57.311 37.500 0.00 0.00 0.00 4.46
8027 8779 7.341030 AGTACAAAGTTAGTACAAAGTTGGGT 58.659 34.615 6.30 0.00 43.24 4.51
8028 8780 7.041576 GGAGTACAAAGTTAGTACAAAGTTGGG 60.042 40.741 6.30 0.00 43.24 4.12
8029 8781 7.041576 GGGAGTACAAAGTTAGTACAAAGTTGG 60.042 40.741 6.30 0.00 43.24 3.77
8030 8782 7.713942 AGGGAGTACAAAGTTAGTACAAAGTTG 59.286 37.037 6.30 0.00 43.24 3.16
8031 8783 7.799081 AGGGAGTACAAAGTTAGTACAAAGTT 58.201 34.615 6.30 0.00 43.24 2.66
8032 8784 7.370905 AGGGAGTACAAAGTTAGTACAAAGT 57.629 36.000 6.30 0.00 43.24 2.66
8033 8785 6.872547 GGAGGGAGTACAAAGTTAGTACAAAG 59.127 42.308 6.30 0.00 43.24 2.77
8034 8786 6.517194 CGGAGGGAGTACAAAGTTAGTACAAA 60.517 42.308 6.30 0.00 43.24 2.83
8035 8787 5.047802 CGGAGGGAGTACAAAGTTAGTACAA 60.048 44.000 6.30 0.00 43.24 2.41
8036 8788 4.460382 CGGAGGGAGTACAAAGTTAGTACA 59.540 45.833 6.30 0.00 43.24 2.90
8037 8789 4.460731 ACGGAGGGAGTACAAAGTTAGTAC 59.539 45.833 0.00 0.00 41.59 2.73
8038 8790 4.666512 ACGGAGGGAGTACAAAGTTAGTA 58.333 43.478 0.00 0.00 0.00 1.82
8039 8791 3.504375 ACGGAGGGAGTACAAAGTTAGT 58.496 45.455 0.00 0.00 0.00 2.24
8040 8792 3.119209 GGACGGAGGGAGTACAAAGTTAG 60.119 52.174 0.00 0.00 0.00 2.34
8041 8793 2.827921 GGACGGAGGGAGTACAAAGTTA 59.172 50.000 0.00 0.00 0.00 2.24
8042 8794 1.622312 GGACGGAGGGAGTACAAAGTT 59.378 52.381 0.00 0.00 0.00 2.66
8043 8795 1.264295 GGACGGAGGGAGTACAAAGT 58.736 55.000 0.00 0.00 0.00 2.66
8044 8796 0.172803 CGGACGGAGGGAGTACAAAG 59.827 60.000 0.00 0.00 0.00 2.77
8045 8797 1.252904 CCGGACGGAGGGAGTACAAA 61.253 60.000 4.40 0.00 37.50 2.83
8046 8798 1.679977 CCGGACGGAGGGAGTACAA 60.680 63.158 4.40 0.00 37.50 2.41
8047 8799 2.044650 CCGGACGGAGGGAGTACA 60.045 66.667 4.40 0.00 37.50 2.90
8048 8800 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
8049 8801 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
8050 8802 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
8051 8803 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
8052 8804 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
8053 8805 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
8054 8806 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
8055 8807 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
8056 8808 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
8057 8809 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
8058 8810 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
8059 8811 2.660189 TCCGACAAGTATTTCCGGAC 57.340 50.000 1.83 0.00 43.47 4.79
8060 8812 3.681593 TTTCCGACAAGTATTTCCGGA 57.318 42.857 0.00 0.00 46.18 5.14
8061 8813 4.752661 TTTTTCCGACAAGTATTTCCGG 57.247 40.909 0.00 0.00 41.36 5.14
8062 8814 5.092781 CCATTTTTCCGACAAGTATTTCCG 58.907 41.667 0.00 0.00 0.00 4.30
8063 8815 6.262193 TCCATTTTTCCGACAAGTATTTCC 57.738 37.500 0.00 0.00 0.00 3.13
8064 8816 7.312899 ACATCCATTTTTCCGACAAGTATTTC 58.687 34.615 0.00 0.00 0.00 2.17
8065 8817 7.227049 ACATCCATTTTTCCGACAAGTATTT 57.773 32.000 0.00 0.00 0.00 1.40
8066 8818 6.834168 ACATCCATTTTTCCGACAAGTATT 57.166 33.333 0.00 0.00 0.00 1.89
8067 8819 7.993183 AGATACATCCATTTTTCCGACAAGTAT 59.007 33.333 0.00 0.00 0.00 2.12
8068 8820 7.335627 AGATACATCCATTTTTCCGACAAGTA 58.664 34.615 0.00 0.00 0.00 2.24
8069 8821 6.180472 AGATACATCCATTTTTCCGACAAGT 58.820 36.000 0.00 0.00 0.00 3.16
8070 8822 6.683974 AGATACATCCATTTTTCCGACAAG 57.316 37.500 0.00 0.00 0.00 3.16
8071 8823 7.494625 GTCTAGATACATCCATTTTTCCGACAA 59.505 37.037 0.00 0.00 0.00 3.18
8072 8824 6.984474 GTCTAGATACATCCATTTTTCCGACA 59.016 38.462 0.00 0.00 0.00 4.35
8073 8825 6.144080 CGTCTAGATACATCCATTTTTCCGAC 59.856 42.308 0.00 0.00 0.00 4.79
8074 8826 6.183360 ACGTCTAGATACATCCATTTTTCCGA 60.183 38.462 0.00 0.00 0.00 4.55
8075 8827 5.983720 ACGTCTAGATACATCCATTTTTCCG 59.016 40.000 0.00 0.00 0.00 4.30
8076 8828 9.141400 GATACGTCTAGATACATCCATTTTTCC 57.859 37.037 0.00 0.00 0.00 3.13
8077 8829 9.141400 GGATACGTCTAGATACATCCATTTTTC 57.859 37.037 17.91 0.00 33.60 2.29
8078 8830 8.647796 TGGATACGTCTAGATACATCCATTTTT 58.352 33.333 20.10 0.00 37.58 1.94
8079 8831 8.190326 TGGATACGTCTAGATACATCCATTTT 57.810 34.615 20.10 0.00 37.58 1.82
8080 8832 7.451877 ACTGGATACGTCTAGATACATCCATTT 59.548 37.037 22.43 14.63 40.72 2.32
8081 8833 6.948886 ACTGGATACGTCTAGATACATCCATT 59.051 38.462 22.43 17.52 40.72 3.16
8082 8834 6.486056 ACTGGATACGTCTAGATACATCCAT 58.514 40.000 22.43 14.55 40.72 3.41
8083 8835 5.877491 ACTGGATACGTCTAGATACATCCA 58.123 41.667 21.53 21.53 39.60 3.41
8084 8836 6.821031 AACTGGATACGTCTAGATACATCC 57.179 41.667 16.76 16.76 36.53 3.51
8085 8837 9.828852 CTAAAACTGGATACGTCTAGATACATC 57.171 37.037 0.00 0.00 36.53 3.06
8086 8838 9.570468 TCTAAAACTGGATACGTCTAGATACAT 57.430 33.333 0.00 0.00 36.53 2.29
8087 8839 8.969260 TCTAAAACTGGATACGTCTAGATACA 57.031 34.615 0.00 0.00 36.53 2.29
8090 8842 9.570468 TGTATCTAAAACTGGATACGTCTAGAT 57.430 33.333 0.00 0.00 44.04 1.98
8091 8843 8.969260 TGTATCTAAAACTGGATACGTCTAGA 57.031 34.615 0.00 0.00 44.04 2.43
8092 8844 9.828852 GATGTATCTAAAACTGGATACGTCTAG 57.171 37.037 19.50 0.00 46.75 2.43
8096 8848 7.356089 TGGATGTATCTAAAACTGGATACGT 57.644 36.000 7.31 7.31 44.04 3.57
8097 8849 8.833231 AATGGATGTATCTAAAACTGGATACG 57.167 34.615 0.00 0.00 44.04 3.06
8112 8864 8.796475 CGGAGAAATGGATAAAAATGGATGTAT 58.204 33.333 0.00 0.00 0.00 2.29
8113 8865 7.996066 TCGGAGAAATGGATAAAAATGGATGTA 59.004 33.333 0.00 0.00 0.00 2.29
8114 8866 6.833416 TCGGAGAAATGGATAAAAATGGATGT 59.167 34.615 0.00 0.00 0.00 3.06
8115 8867 7.141363 GTCGGAGAAATGGATAAAAATGGATG 58.859 38.462 0.00 0.00 39.69 3.51
8116 8868 6.833416 TGTCGGAGAAATGGATAAAAATGGAT 59.167 34.615 0.00 0.00 39.69 3.41
8117 8869 6.184068 TGTCGGAGAAATGGATAAAAATGGA 58.816 36.000 0.00 0.00 39.69 3.41
8118 8870 6.449635 TGTCGGAGAAATGGATAAAAATGG 57.550 37.500 0.00 0.00 39.69 3.16
8119 8871 7.538575 ACTTGTCGGAGAAATGGATAAAAATG 58.461 34.615 0.00 0.00 39.69 2.32
8120 8872 7.703058 ACTTGTCGGAGAAATGGATAAAAAT 57.297 32.000 0.00 0.00 39.69 1.82
8121 8873 8.801882 ATACTTGTCGGAGAAATGGATAAAAA 57.198 30.769 0.00 0.00 39.69 1.94
8122 8874 8.801882 AATACTTGTCGGAGAAATGGATAAAA 57.198 30.769 0.00 0.00 39.69 1.52
8123 8875 8.801882 AAATACTTGTCGGAGAAATGGATAAA 57.198 30.769 0.00 0.00 39.69 1.40
8126 8878 9.712305 CTATAAATACTTGTCGGAGAAATGGAT 57.288 33.333 0.00 0.00 39.69 3.41
8127 8879 8.920174 TCTATAAATACTTGTCGGAGAAATGGA 58.080 33.333 0.00 0.00 39.69 3.41
8128 8880 8.979574 GTCTATAAATACTTGTCGGAGAAATGG 58.020 37.037 0.00 0.00 39.69 3.16
8129 8881 8.691727 CGTCTATAAATACTTGTCGGAGAAATG 58.308 37.037 0.00 0.00 39.69 2.32
8130 8882 7.866393 CCGTCTATAAATACTTGTCGGAGAAAT 59.134 37.037 0.00 0.00 39.69 2.17
8131 8883 7.067372 TCCGTCTATAAATACTTGTCGGAGAAA 59.933 37.037 0.00 0.00 39.69 2.52
8132 8884 6.543465 TCCGTCTATAAATACTTGTCGGAGAA 59.457 38.462 0.00 0.00 39.69 2.87
8133 8885 6.057533 TCCGTCTATAAATACTTGTCGGAGA 58.942 40.000 0.00 0.00 39.45 3.71
8134 8886 6.309712 TCCGTCTATAAATACTTGTCGGAG 57.690 41.667 0.00 0.00 39.45 4.63
8135 8887 5.240183 CCTCCGTCTATAAATACTTGTCGGA 59.760 44.000 0.00 0.00 41.50 4.55
8136 8888 5.458891 CCTCCGTCTATAAATACTTGTCGG 58.541 45.833 0.00 0.00 37.29 4.79
8137 8889 5.240183 TCCCTCCGTCTATAAATACTTGTCG 59.760 44.000 0.00 0.00 0.00 4.35
8138 8890 6.264970 ACTCCCTCCGTCTATAAATACTTGTC 59.735 42.308 0.00 0.00 0.00 3.18
8139 8891 6.134754 ACTCCCTCCGTCTATAAATACTTGT 58.865 40.000 0.00 0.00 0.00 3.16
8140 8892 6.651975 ACTCCCTCCGTCTATAAATACTTG 57.348 41.667 0.00 0.00 0.00 3.16
8141 8893 7.525165 ACTACTCCCTCCGTCTATAAATACTT 58.475 38.462 0.00 0.00 0.00 2.24
8142 8894 7.089106 ACTACTCCCTCCGTCTATAAATACT 57.911 40.000 0.00 0.00 0.00 2.12
8143 8895 7.880195 TGTACTACTCCCTCCGTCTATAAATAC 59.120 40.741 0.00 0.00 0.00 1.89
8144 8896 7.977818 TGTACTACTCCCTCCGTCTATAAATA 58.022 38.462 0.00 0.00 0.00 1.40
8145 8897 6.845908 TGTACTACTCCCTCCGTCTATAAAT 58.154 40.000 0.00 0.00 0.00 1.40
8146 8898 6.252599 TGTACTACTCCCTCCGTCTATAAA 57.747 41.667 0.00 0.00 0.00 1.40
8147 8899 5.894298 TGTACTACTCCCTCCGTCTATAA 57.106 43.478 0.00 0.00 0.00 0.98
8148 8900 5.894298 TTGTACTACTCCCTCCGTCTATA 57.106 43.478 0.00 0.00 0.00 1.31
8149 8901 4.785346 TTGTACTACTCCCTCCGTCTAT 57.215 45.455 0.00 0.00 0.00 1.98
8150 8902 4.018960 ACTTTGTACTACTCCCTCCGTCTA 60.019 45.833 0.00 0.00 0.00 2.59
8151 8903 3.245193 ACTTTGTACTACTCCCTCCGTCT 60.245 47.826 0.00 0.00 0.00 4.18
8152 8904 3.087781 ACTTTGTACTACTCCCTCCGTC 58.912 50.000 0.00 0.00 0.00 4.79
8153 8905 3.166560 ACTTTGTACTACTCCCTCCGT 57.833 47.619 0.00 0.00 0.00 4.69
8154 8906 3.368116 CCAACTTTGTACTACTCCCTCCG 60.368 52.174 0.00 0.00 0.00 4.63
8155 8907 3.055312 CCCAACTTTGTACTACTCCCTCC 60.055 52.174 0.00 0.00 0.00 4.30
8156 8908 3.581770 ACCCAACTTTGTACTACTCCCTC 59.418 47.826 0.00 0.00 0.00 4.30
8157 8909 3.581770 GACCCAACTTTGTACTACTCCCT 59.418 47.826 0.00 0.00 0.00 4.20
8158 8910 3.325716 TGACCCAACTTTGTACTACTCCC 59.674 47.826 0.00 0.00 0.00 4.30
8159 8911 4.612264 TGACCCAACTTTGTACTACTCC 57.388 45.455 0.00 0.00 0.00 3.85
8160 8912 6.038997 AGATGACCCAACTTTGTACTACTC 57.961 41.667 0.00 0.00 0.00 2.59
8161 8913 7.735326 ATAGATGACCCAACTTTGTACTACT 57.265 36.000 0.00 0.00 0.00 2.57
8162 8914 8.788325 AAATAGATGACCCAACTTTGTACTAC 57.212 34.615 0.00 0.00 0.00 2.73
8163 8915 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
8164 8916 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
8165 8917 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
8166 8918 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
8167 8919 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
8168 8920 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
8169 8921 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
8170 8922 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
8171 8923 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
8172 8924 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
8173 8925 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
8174 8926 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
8175 8927 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
8176 8928 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
8177 8929 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
8178 8930 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
8179 8931 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
8180 8932 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
8181 8933 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
8182 8934 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
8183 8935 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
8184 8936 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
8185 8937 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
8186 8938 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
8187 8939 1.946984 ATGTACTCCCTCCGTTCCAA 58.053 50.000 0.00 0.00 0.00 3.53
8188 8940 1.829222 GAATGTACTCCCTCCGTTCCA 59.171 52.381 0.00 0.00 0.00 3.53
8189 8941 1.138464 GGAATGTACTCCCTCCGTTCC 59.862 57.143 0.00 0.00 37.17 3.62
8190 8942 1.829222 TGGAATGTACTCCCTCCGTTC 59.171 52.381 0.00 0.00 34.22 3.95
8191 8943 1.946984 TGGAATGTACTCCCTCCGTT 58.053 50.000 0.00 0.00 34.22 4.44
8192 8944 2.176247 ATGGAATGTACTCCCTCCGT 57.824 50.000 0.00 0.00 34.22 4.69
8193 8945 3.206150 CAAATGGAATGTACTCCCTCCG 58.794 50.000 0.00 0.00 34.22 4.63
8194 8946 3.053619 ACCAAATGGAATGTACTCCCTCC 60.054 47.826 6.42 0.00 38.94 4.30
8195 8947 3.947834 CACCAAATGGAATGTACTCCCTC 59.052 47.826 6.42 0.00 38.94 4.30
8196 8948 3.333680 ACACCAAATGGAATGTACTCCCT 59.666 43.478 6.42 0.00 38.94 4.20
8197 8949 3.694566 GACACCAAATGGAATGTACTCCC 59.305 47.826 6.42 0.00 38.94 4.30
8198 8950 3.374058 CGACACCAAATGGAATGTACTCC 59.626 47.826 6.42 0.00 38.94 3.85
8199 8951 3.374058 CCGACACCAAATGGAATGTACTC 59.626 47.826 6.42 0.00 38.94 2.59
8495 9247 2.374184 TCCAATTTATCAACAGGGCCG 58.626 47.619 0.00 0.00 0.00 6.13
8636 9388 3.244700 CCATCACCTTCTCACTTCCAGTT 60.245 47.826 0.00 0.00 0.00 3.16
8638 9390 2.568956 TCCATCACCTTCTCACTTCCAG 59.431 50.000 0.00 0.00 0.00 3.86
8839 9594 1.811359 CCTTTTCCTGCTTCTGCTCAG 59.189 52.381 0.00 0.00 40.48 3.35
8843 9598 1.172175 CCTCCTTTTCCTGCTTCTGC 58.828 55.000 0.00 0.00 40.20 4.26
8899 9654 7.450014 ACCATGGTGAACAAAACTGTGATATAA 59.550 33.333 18.99 0.00 0.00 0.98
8991 9747 4.708177 TGAGCTATTTAGACAGGAATGGC 58.292 43.478 0.00 0.00 39.25 4.40
8998 9754 2.703007 AGCCCCTGAGCTATTTAGACAG 59.297 50.000 0.00 0.00 42.70 3.51
9069 9825 0.680618 CCACTTTTGCATCTTGGGCA 59.319 50.000 0.00 0.00 40.00 5.36
9442 10201 2.223876 ACGGACACAGCGAGTAAAAAGA 60.224 45.455 0.00 0.00 0.00 2.52
9530 10291 0.098200 CTGCATCGCCACAATCACAG 59.902 55.000 0.00 0.00 0.00 3.66
9542 10303 1.057822 CGAACTGTTCGCTGCATCG 59.942 57.895 27.24 2.97 46.97 3.84
9596 10357 5.809051 CGACCTGTAACTTGTTACCCTATTC 59.191 44.000 17.64 8.53 0.00 1.75
9612 10373 6.262944 TGACTAGTGAAGTAAAACGACCTGTA 59.737 38.462 0.00 0.00 39.07 2.74
9687 10449 3.070429 CATCATCGACGAGTGATGTCA 57.930 47.619 25.69 2.59 44.12 3.58
9698 10460 2.096980 TGACGTCCAGTACATCATCGAC 59.903 50.000 14.12 0.00 0.00 4.20
9700 10462 2.844122 TGACGTCCAGTACATCATCG 57.156 50.000 14.12 0.00 0.00 3.84
9709 10471 2.325082 GCCGCATTTGACGTCCAGT 61.325 57.895 14.12 0.00 0.00 4.00
9713 10475 2.095843 GTCGCCGCATTTGACGTC 59.904 61.111 9.11 9.11 0.00 4.34
9745 10507 2.136196 TTTTTGGCGATCGTGGTGGC 62.136 55.000 17.81 0.16 0.00 5.01
9819 10581 0.811915 CGTTGGTGAGAGAGATCCGT 59.188 55.000 0.00 0.00 0.00 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.