Multiple sequence alignment - TraesCS2D01G464100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G464100 chr2D 100.000 2211 0 0 930 3140 569811162 569813372 0.000000e+00 4084.0
1 TraesCS2D01G464100 chr2D 100.000 549 0 0 1 549 569810233 569810781 0.000000e+00 1014.0
2 TraesCS2D01G464100 chr2B 88.636 2200 226 6 941 3140 50449699 50451874 0.000000e+00 2656.0
3 TraesCS2D01G464100 chr2B 94.444 180 9 1 248 426 682196414 682196593 3.080000e-70 276.0
4 TraesCS2D01G464100 chr1B 93.635 927 48 4 941 1867 521747181 521748096 0.000000e+00 1375.0
5 TraesCS2D01G464100 chr5A 91.022 969 77 1 2172 3140 640694337 640695295 0.000000e+00 1299.0
6 TraesCS2D01G464100 chr5A 91.986 861 69 0 1244 2104 640693321 640694181 0.000000e+00 1208.0
7 TraesCS2D01G464100 chr5A 93.091 275 19 0 941 1215 640693050 640693324 1.360000e-108 403.0
8 TraesCS2D01G464100 chr5D 78.888 1061 216 8 2084 3140 539855141 539856197 0.000000e+00 712.0
9 TraesCS2D01G464100 chr5D 80.563 782 144 7 978 1755 539854041 539854818 2.080000e-166 595.0
10 TraesCS2D01G464100 chr5D 100.000 30 0 0 459 488 448832893 448832864 4.370000e-04 56.5
11 TraesCS2D01G464100 chr3D 78.343 1062 219 10 2083 3140 591212521 591213575 0.000000e+00 676.0
12 TraesCS2D01G464100 chr6B 78.381 1050 220 7 2080 3126 417460298 417461343 0.000000e+00 675.0
13 TraesCS2D01G464100 chr6B 75.699 1037 234 17 2101 3127 75499939 75500967 1.300000e-138 503.0
14 TraesCS2D01G464100 chr6B 78.629 744 150 9 2087 2826 94010637 94009899 4.710000e-133 484.0
15 TraesCS2D01G464100 chr7D 80.563 782 150 2 975 1755 76326141 76325361 4.480000e-168 601.0
16 TraesCS2D01G464100 chr7D 79.545 792 139 10 966 1755 561616786 561616016 7.660000e-151 544.0
17 TraesCS2D01G464100 chr4D 80.587 783 147 5 975 1755 54061235 54062014 1.610000e-167 599.0
18 TraesCS2D01G464100 chr4D 100.000 30 0 0 459 488 505427430 505427401 4.370000e-04 56.5
19 TraesCS2D01G464100 chr1D 76.692 1064 235 12 2084 3140 73083960 73085017 2.100000e-161 579.0
20 TraesCS2D01G464100 chr7A 73.547 1032 261 12 2101 3126 721937109 721936084 1.770000e-102 383.0
21 TraesCS2D01G464100 chr7A 94.286 35 2 0 462 496 521566701 521566667 2.000000e-03 54.7
22 TraesCS2D01G464100 chr3A 76.383 741 157 17 2083 2814 730875905 730875174 1.770000e-102 383.0
23 TraesCS2D01G464100 chr2A 87.008 254 19 6 248 500 709063458 709063698 1.110000e-69 274.0
24 TraesCS2D01G464100 chr6A 100.000 28 0 0 461 488 13406529 13406502 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G464100 chr2D 569810233 569813372 3139 False 2549.0 4084 100.0000 1 3140 2 chr2D.!!$F1 3139
1 TraesCS2D01G464100 chr2B 50449699 50451874 2175 False 2656.0 2656 88.6360 941 3140 1 chr2B.!!$F1 2199
2 TraesCS2D01G464100 chr1B 521747181 521748096 915 False 1375.0 1375 93.6350 941 1867 1 chr1B.!!$F1 926
3 TraesCS2D01G464100 chr5A 640693050 640695295 2245 False 970.0 1299 92.0330 941 3140 3 chr5A.!!$F1 2199
4 TraesCS2D01G464100 chr5D 539854041 539856197 2156 False 653.5 712 79.7255 978 3140 2 chr5D.!!$F1 2162
5 TraesCS2D01G464100 chr3D 591212521 591213575 1054 False 676.0 676 78.3430 2083 3140 1 chr3D.!!$F1 1057
6 TraesCS2D01G464100 chr6B 417460298 417461343 1045 False 675.0 675 78.3810 2080 3126 1 chr6B.!!$F2 1046
7 TraesCS2D01G464100 chr6B 75499939 75500967 1028 False 503.0 503 75.6990 2101 3127 1 chr6B.!!$F1 1026
8 TraesCS2D01G464100 chr6B 94009899 94010637 738 True 484.0 484 78.6290 2087 2826 1 chr6B.!!$R1 739
9 TraesCS2D01G464100 chr7D 76325361 76326141 780 True 601.0 601 80.5630 975 1755 1 chr7D.!!$R1 780
10 TraesCS2D01G464100 chr7D 561616016 561616786 770 True 544.0 544 79.5450 966 1755 1 chr7D.!!$R2 789
11 TraesCS2D01G464100 chr4D 54061235 54062014 779 False 599.0 599 80.5870 975 1755 1 chr4D.!!$F1 780
12 TraesCS2D01G464100 chr1D 73083960 73085017 1057 False 579.0 579 76.6920 2084 3140 1 chr1D.!!$F1 1056
13 TraesCS2D01G464100 chr7A 721936084 721937109 1025 True 383.0 383 73.5470 2101 3126 1 chr7A.!!$R2 1025
14 TraesCS2D01G464100 chr3A 730875174 730875905 731 True 383.0 383 76.3830 2083 2814 1 chr3A.!!$R1 731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.034059 AACTTCAGTCAGAGGTGCCG 59.966 55.0 0.0 0.0 36.57 5.69 F
403 404 0.036010 CCAGGAGATTTGTGTCCGCT 60.036 55.0 0.0 0.0 37.97 5.52 F
1272 1273 0.249280 GCCCGAACCTTTTTGTGGTG 60.249 55.0 0.0 0.0 37.93 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2033 2039 0.105039 GCTGCTACTAGCCGGTGAAT 59.895 55.0 1.90 0.0 41.51 2.57 R
2034 2040 1.254975 TGCTGCTACTAGCCGGTGAA 61.255 55.0 1.90 0.0 41.51 3.18 R
2829 2923 0.036952 TTCTCTTCGGCTCCAGCAAG 60.037 55.0 0.03 0.0 44.36 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.844884 ACCTTAATGGACTGTAAAGAGGC 58.155 43.478 0.00 0.00 39.71 4.70
24 25 4.200092 CCTTAATGGACTGTAAAGAGGCC 58.800 47.826 0.00 0.00 42.32 5.19
28 29 2.861147 GGACTGTAAAGAGGCCAAGT 57.139 50.000 5.01 0.00 41.47 3.16
29 30 3.975168 GGACTGTAAAGAGGCCAAGTA 57.025 47.619 5.01 0.00 41.47 2.24
30 31 4.281898 GGACTGTAAAGAGGCCAAGTAA 57.718 45.455 5.01 0.00 41.47 2.24
31 32 4.001652 GGACTGTAAAGAGGCCAAGTAAC 58.998 47.826 5.01 0.00 41.47 2.50
32 33 4.262938 GGACTGTAAAGAGGCCAAGTAACT 60.263 45.833 5.01 0.00 41.47 2.24
33 34 5.306114 ACTGTAAAGAGGCCAAGTAACTT 57.694 39.130 5.01 0.00 0.00 2.66
34 35 5.063880 ACTGTAAAGAGGCCAAGTAACTTG 58.936 41.667 5.01 0.00 40.75 3.16
35 36 5.163237 ACTGTAAAGAGGCCAAGTAACTTGA 60.163 40.000 5.01 0.00 43.42 3.02
36 37 5.061179 TGTAAAGAGGCCAAGTAACTTGAC 58.939 41.667 5.01 4.66 43.42 3.18
37 38 3.857157 AAGAGGCCAAGTAACTTGACA 57.143 42.857 5.01 0.00 43.42 3.58
38 39 3.857157 AGAGGCCAAGTAACTTGACAA 57.143 42.857 5.01 0.00 43.42 3.18
39 40 4.164843 AGAGGCCAAGTAACTTGACAAA 57.835 40.909 5.01 0.00 43.42 2.83
40 41 4.532834 AGAGGCCAAGTAACTTGACAAAA 58.467 39.130 5.01 0.00 43.42 2.44
41 42 4.953579 AGAGGCCAAGTAACTTGACAAAAA 59.046 37.500 5.01 0.00 43.42 1.94
42 43 5.598417 AGAGGCCAAGTAACTTGACAAAAAT 59.402 36.000 5.01 0.00 43.42 1.82
43 44 5.842907 AGGCCAAGTAACTTGACAAAAATC 58.157 37.500 5.01 0.00 43.42 2.17
44 45 5.598417 AGGCCAAGTAACTTGACAAAAATCT 59.402 36.000 5.01 0.00 43.42 2.40
45 46 5.691754 GGCCAAGTAACTTGACAAAAATCTG 59.308 40.000 0.00 0.00 43.42 2.90
46 47 6.460953 GGCCAAGTAACTTGACAAAAATCTGA 60.461 38.462 0.00 0.00 43.42 3.27
47 48 6.417930 GCCAAGTAACTTGACAAAAATCTGAC 59.582 38.462 0.00 0.00 43.42 3.51
48 49 7.682021 GCCAAGTAACTTGACAAAAATCTGACT 60.682 37.037 0.00 0.00 43.42 3.41
49 50 7.645340 CCAAGTAACTTGACAAAAATCTGACTG 59.355 37.037 0.00 0.00 43.42 3.51
50 51 8.397906 CAAGTAACTTGACAAAAATCTGACTGA 58.602 33.333 0.00 0.00 43.42 3.41
51 52 8.506168 AGTAACTTGACAAAAATCTGACTGAA 57.494 30.769 0.00 0.00 0.00 3.02
52 53 8.956426 AGTAACTTGACAAAAATCTGACTGAAA 58.044 29.630 0.00 0.00 0.00 2.69
53 54 9.010366 GTAACTTGACAAAAATCTGACTGAAAC 57.990 33.333 0.00 0.00 0.00 2.78
54 55 7.396540 ACTTGACAAAAATCTGACTGAAACT 57.603 32.000 0.00 0.00 0.00 2.66
55 56 7.830739 ACTTGACAAAAATCTGACTGAAACTT 58.169 30.769 0.00 0.00 0.00 2.66
56 57 7.970614 ACTTGACAAAAATCTGACTGAAACTTC 59.029 33.333 0.00 0.00 0.00 3.01
57 58 7.389803 TGACAAAAATCTGACTGAAACTTCA 57.610 32.000 0.00 0.00 35.57 3.02
68 69 2.838736 TGAAACTTCAGTCAGAGGTGC 58.161 47.619 0.00 0.00 36.57 5.01
69 70 2.147150 GAAACTTCAGTCAGAGGTGCC 58.853 52.381 0.00 0.00 36.57 5.01
70 71 0.034059 AACTTCAGTCAGAGGTGCCG 59.966 55.000 0.00 0.00 36.57 5.69
71 72 0.827925 ACTTCAGTCAGAGGTGCCGA 60.828 55.000 0.00 0.00 34.92 5.54
72 73 0.534412 CTTCAGTCAGAGGTGCCGAT 59.466 55.000 0.00 0.00 0.00 4.18
73 74 0.976641 TTCAGTCAGAGGTGCCGATT 59.023 50.000 0.00 0.00 0.00 3.34
74 75 0.976641 TCAGTCAGAGGTGCCGATTT 59.023 50.000 0.00 0.00 0.00 2.17
75 76 1.081892 CAGTCAGAGGTGCCGATTTG 58.918 55.000 0.00 0.00 0.00 2.32
76 77 0.687354 AGTCAGAGGTGCCGATTTGT 59.313 50.000 0.00 0.00 0.00 2.83
77 78 1.072331 AGTCAGAGGTGCCGATTTGTT 59.928 47.619 0.00 0.00 0.00 2.83
78 79 1.197721 GTCAGAGGTGCCGATTTGTTG 59.802 52.381 0.00 0.00 0.00 3.33
79 80 1.202758 TCAGAGGTGCCGATTTGTTGT 60.203 47.619 0.00 0.00 0.00 3.32
80 81 1.069022 CAGAGGTGCCGATTTGTTGTG 60.069 52.381 0.00 0.00 0.00 3.33
81 82 1.202758 AGAGGTGCCGATTTGTTGTGA 60.203 47.619 0.00 0.00 0.00 3.58
82 83 1.606668 GAGGTGCCGATTTGTTGTGAA 59.393 47.619 0.00 0.00 0.00 3.18
83 84 1.336755 AGGTGCCGATTTGTTGTGAAC 59.663 47.619 0.00 0.00 0.00 3.18
84 85 1.336755 GGTGCCGATTTGTTGTGAACT 59.663 47.619 0.00 0.00 0.00 3.01
85 86 2.550606 GGTGCCGATTTGTTGTGAACTA 59.449 45.455 0.00 0.00 0.00 2.24
86 87 3.190535 GGTGCCGATTTGTTGTGAACTAT 59.809 43.478 0.00 0.00 0.00 2.12
87 88 4.320935 GGTGCCGATTTGTTGTGAACTATT 60.321 41.667 0.00 0.00 0.00 1.73
88 89 5.219633 GTGCCGATTTGTTGTGAACTATTT 58.780 37.500 0.00 0.00 0.00 1.40
89 90 5.342259 GTGCCGATTTGTTGTGAACTATTTC 59.658 40.000 0.00 0.00 0.00 2.17
90 91 4.553429 GCCGATTTGTTGTGAACTATTTCG 59.447 41.667 0.00 0.00 34.04 3.46
91 92 5.685841 CCGATTTGTTGTGAACTATTTCGT 58.314 37.500 0.00 0.00 34.04 3.85
92 93 6.140110 CCGATTTGTTGTGAACTATTTCGTT 58.860 36.000 0.00 0.00 34.04 3.85
93 94 6.635239 CCGATTTGTTGTGAACTATTTCGTTT 59.365 34.615 0.00 0.00 34.04 3.60
94 95 7.149192 CCGATTTGTTGTGAACTATTTCGTTTC 60.149 37.037 0.00 0.00 34.04 2.78
95 96 7.406832 CGATTTGTTGTGAACTATTTCGTTTCG 60.407 37.037 0.00 0.00 34.04 3.46
96 97 5.721876 TGTTGTGAACTATTTCGTTTCGT 57.278 34.783 0.00 0.00 34.04 3.85
97 98 6.825284 TGTTGTGAACTATTTCGTTTCGTA 57.175 33.333 0.00 0.00 34.04 3.43
98 99 6.639212 TGTTGTGAACTATTTCGTTTCGTAC 58.361 36.000 0.00 0.00 34.04 3.67
99 100 6.255237 TGTTGTGAACTATTTCGTTTCGTACA 59.745 34.615 0.00 0.00 34.04 2.90
100 101 7.042590 TGTTGTGAACTATTTCGTTTCGTACAT 60.043 33.333 0.00 0.00 34.04 2.29
101 102 8.427012 GTTGTGAACTATTTCGTTTCGTACATA 58.573 33.333 0.00 0.00 34.04 2.29
102 103 7.941865 TGTGAACTATTTCGTTTCGTACATAC 58.058 34.615 0.00 0.00 34.04 2.39
103 104 7.062138 TGTGAACTATTTCGTTTCGTACATACC 59.938 37.037 0.00 0.00 34.04 2.73
104 105 7.062138 GTGAACTATTTCGTTTCGTACATACCA 59.938 37.037 0.00 0.00 34.04 3.25
105 106 7.598118 TGAACTATTTCGTTTCGTACATACCAA 59.402 33.333 0.00 0.00 34.04 3.67
106 107 7.887996 ACTATTTCGTTTCGTACATACCAAA 57.112 32.000 0.00 0.00 0.00 3.28
107 108 8.483307 ACTATTTCGTTTCGTACATACCAAAT 57.517 30.769 0.00 0.00 0.00 2.32
108 109 8.385111 ACTATTTCGTTTCGTACATACCAAATG 58.615 33.333 0.00 0.00 0.00 2.32
109 110 6.542574 TTTCGTTTCGTACATACCAAATGT 57.457 33.333 0.00 0.00 36.13 2.71
110 111 5.518529 TCGTTTCGTACATACCAAATGTG 57.481 39.130 0.97 0.00 33.76 3.21
111 112 4.085884 CGTTTCGTACATACCAAATGTGC 58.914 43.478 0.97 0.00 33.76 4.57
112 113 4.408694 GTTTCGTACATACCAAATGTGCC 58.591 43.478 0.97 0.00 32.20 5.01
113 114 3.336138 TCGTACATACCAAATGTGCCA 57.664 42.857 0.97 0.00 32.20 4.92
114 115 3.266636 TCGTACATACCAAATGTGCCAG 58.733 45.455 0.97 0.00 32.20 4.85
115 116 3.055747 TCGTACATACCAAATGTGCCAGA 60.056 43.478 0.97 0.00 32.20 3.86
116 117 3.687212 CGTACATACCAAATGTGCCAGAA 59.313 43.478 0.97 0.00 32.20 3.02
117 118 4.201812 CGTACATACCAAATGTGCCAGAAG 60.202 45.833 0.97 0.00 32.20 2.85
118 119 4.032960 ACATACCAAATGTGCCAGAAGA 57.967 40.909 0.00 0.00 0.00 2.87
119 120 4.012374 ACATACCAAATGTGCCAGAAGAG 58.988 43.478 0.00 0.00 0.00 2.85
120 121 1.251251 ACCAAATGTGCCAGAAGAGC 58.749 50.000 0.00 0.00 0.00 4.09
121 122 1.250328 CCAAATGTGCCAGAAGAGCA 58.750 50.000 0.00 0.00 38.08 4.26
122 123 1.822990 CCAAATGTGCCAGAAGAGCAT 59.177 47.619 0.00 0.00 43.29 3.79
123 124 3.018856 CCAAATGTGCCAGAAGAGCATA 58.981 45.455 0.00 0.00 43.29 3.14
124 125 3.444742 CCAAATGTGCCAGAAGAGCATAA 59.555 43.478 0.00 0.00 43.29 1.90
125 126 4.439700 CCAAATGTGCCAGAAGAGCATAAG 60.440 45.833 0.00 0.00 43.29 1.73
126 127 3.641434 ATGTGCCAGAAGAGCATAAGT 57.359 42.857 0.00 0.00 43.29 2.24
127 128 4.760530 ATGTGCCAGAAGAGCATAAGTA 57.239 40.909 0.00 0.00 43.29 2.24
128 129 4.551702 TGTGCCAGAAGAGCATAAGTAA 57.448 40.909 0.00 0.00 43.29 2.24
129 130 4.253685 TGTGCCAGAAGAGCATAAGTAAC 58.746 43.478 0.00 0.00 43.29 2.50
130 131 3.623510 GTGCCAGAAGAGCATAAGTAACC 59.376 47.826 0.00 0.00 43.29 2.85
131 132 2.866762 GCCAGAAGAGCATAAGTAACCG 59.133 50.000 0.00 0.00 0.00 4.44
132 133 2.866762 CCAGAAGAGCATAAGTAACCGC 59.133 50.000 0.00 0.00 0.00 5.68
133 134 3.521560 CAGAAGAGCATAAGTAACCGCA 58.478 45.455 0.00 0.00 0.00 5.69
134 135 3.307242 CAGAAGAGCATAAGTAACCGCAC 59.693 47.826 0.00 0.00 0.00 5.34
135 136 2.311124 AGAGCATAAGTAACCGCACC 57.689 50.000 0.00 0.00 0.00 5.01
136 137 1.134491 AGAGCATAAGTAACCGCACCC 60.134 52.381 0.00 0.00 0.00 4.61
137 138 0.616371 AGCATAAGTAACCGCACCCA 59.384 50.000 0.00 0.00 0.00 4.51
138 139 1.211949 AGCATAAGTAACCGCACCCAT 59.788 47.619 0.00 0.00 0.00 4.00
139 140 1.333619 GCATAAGTAACCGCACCCATG 59.666 52.381 0.00 0.00 0.00 3.66
140 141 2.639065 CATAAGTAACCGCACCCATGT 58.361 47.619 0.00 0.00 0.00 3.21
141 142 3.799366 CATAAGTAACCGCACCCATGTA 58.201 45.455 0.00 0.00 0.00 2.29
142 143 2.396590 AAGTAACCGCACCCATGTAG 57.603 50.000 0.00 0.00 0.00 2.74
143 144 0.539986 AGTAACCGCACCCATGTAGG 59.460 55.000 0.00 0.00 33.60 3.18
144 145 1.093496 GTAACCGCACCCATGTAGGC 61.093 60.000 0.00 0.00 35.39 3.93
145 146 1.268992 TAACCGCACCCATGTAGGCT 61.269 55.000 0.00 0.00 35.39 4.58
146 147 2.203070 CCGCACCCATGTAGGCTC 60.203 66.667 0.00 0.00 35.39 4.70
147 148 2.203070 CGCACCCATGTAGGCTCC 60.203 66.667 0.00 0.00 35.39 4.70
148 149 2.735772 CGCACCCATGTAGGCTCCT 61.736 63.158 0.00 0.00 35.39 3.69
149 150 1.147153 GCACCCATGTAGGCTCCTC 59.853 63.158 0.00 0.00 35.39 3.71
150 151 1.626356 GCACCCATGTAGGCTCCTCA 61.626 60.000 0.00 0.00 35.39 3.86
151 152 0.911769 CACCCATGTAGGCTCCTCAA 59.088 55.000 0.00 0.00 35.39 3.02
152 153 1.134280 CACCCATGTAGGCTCCTCAAG 60.134 57.143 0.00 0.00 35.39 3.02
163 164 2.634815 CTCCTCAAGCTGGCATATGT 57.365 50.000 4.29 0.00 0.00 2.29
164 165 3.758755 CTCCTCAAGCTGGCATATGTA 57.241 47.619 4.29 0.00 0.00 2.29
165 166 3.397482 CTCCTCAAGCTGGCATATGTAC 58.603 50.000 4.29 0.00 0.00 2.90
166 167 3.041211 TCCTCAAGCTGGCATATGTACT 58.959 45.455 4.29 0.00 0.00 2.73
167 168 3.136763 CCTCAAGCTGGCATATGTACTG 58.863 50.000 4.29 3.69 0.00 2.74
168 169 3.181462 CCTCAAGCTGGCATATGTACTGA 60.181 47.826 4.29 0.00 0.00 3.41
169 170 4.445453 CTCAAGCTGGCATATGTACTGAA 58.555 43.478 4.29 0.00 0.00 3.02
170 171 5.039920 TCAAGCTGGCATATGTACTGAAT 57.960 39.130 4.29 0.00 0.00 2.57
171 172 4.818005 TCAAGCTGGCATATGTACTGAATG 59.182 41.667 4.29 5.46 0.00 2.67
172 173 4.694760 AGCTGGCATATGTACTGAATGA 57.305 40.909 4.29 0.00 0.00 2.57
173 174 5.039920 AGCTGGCATATGTACTGAATGAA 57.960 39.130 4.29 0.00 0.00 2.57
174 175 4.818546 AGCTGGCATATGTACTGAATGAAC 59.181 41.667 4.29 0.00 0.00 3.18
175 176 4.023707 GCTGGCATATGTACTGAATGAACC 60.024 45.833 4.29 0.00 0.00 3.62
176 177 5.109500 TGGCATATGTACTGAATGAACCA 57.891 39.130 4.29 0.00 0.00 3.67
177 178 5.693961 TGGCATATGTACTGAATGAACCAT 58.306 37.500 4.29 0.00 0.00 3.55
178 179 6.128486 TGGCATATGTACTGAATGAACCATT 58.872 36.000 4.29 0.00 36.72 3.16
190 191 3.272574 TGAACCATTCATCTCCAGAGC 57.727 47.619 0.00 0.00 34.08 4.09
191 192 2.208431 GAACCATTCATCTCCAGAGCG 58.792 52.381 0.00 0.00 0.00 5.03
192 193 1.198713 ACCATTCATCTCCAGAGCGT 58.801 50.000 0.00 0.00 0.00 5.07
193 194 1.134580 ACCATTCATCTCCAGAGCGTG 60.135 52.381 0.00 0.00 0.00 5.34
194 195 0.935898 CATTCATCTCCAGAGCGTGC 59.064 55.000 0.00 0.00 0.00 5.34
195 196 0.538584 ATTCATCTCCAGAGCGTGCA 59.461 50.000 0.00 0.00 0.00 4.57
196 197 0.321346 TTCATCTCCAGAGCGTGCAA 59.679 50.000 0.00 0.00 0.00 4.08
197 198 0.538584 TCATCTCCAGAGCGTGCAAT 59.461 50.000 0.00 0.00 0.00 3.56
198 199 1.756538 TCATCTCCAGAGCGTGCAATA 59.243 47.619 0.00 0.00 0.00 1.90
199 200 2.133553 CATCTCCAGAGCGTGCAATAG 58.866 52.381 0.00 0.00 0.00 1.73
200 201 1.474330 TCTCCAGAGCGTGCAATAGA 58.526 50.000 0.00 0.00 0.00 1.98
201 202 1.824852 TCTCCAGAGCGTGCAATAGAA 59.175 47.619 0.00 0.00 0.00 2.10
202 203 2.159184 TCTCCAGAGCGTGCAATAGAAG 60.159 50.000 0.00 0.00 0.00 2.85
203 204 1.550524 TCCAGAGCGTGCAATAGAAGT 59.449 47.619 0.00 0.00 0.00 3.01
204 205 2.758423 TCCAGAGCGTGCAATAGAAGTA 59.242 45.455 0.00 0.00 0.00 2.24
205 206 3.194755 TCCAGAGCGTGCAATAGAAGTAA 59.805 43.478 0.00 0.00 0.00 2.24
206 207 3.307242 CCAGAGCGTGCAATAGAAGTAAC 59.693 47.826 0.00 0.00 0.00 2.50
207 208 3.926527 CAGAGCGTGCAATAGAAGTAACA 59.073 43.478 0.00 0.00 0.00 2.41
208 209 4.568359 CAGAGCGTGCAATAGAAGTAACAT 59.432 41.667 0.00 0.00 0.00 2.71
209 210 4.806247 AGAGCGTGCAATAGAAGTAACATC 59.194 41.667 0.00 0.00 0.00 3.06
210 211 3.871594 AGCGTGCAATAGAAGTAACATCC 59.128 43.478 0.00 0.00 0.00 3.51
211 212 3.621268 GCGTGCAATAGAAGTAACATCCA 59.379 43.478 0.00 0.00 0.00 3.41
212 213 4.260375 GCGTGCAATAGAAGTAACATCCAG 60.260 45.833 0.00 0.00 0.00 3.86
213 214 4.870426 CGTGCAATAGAAGTAACATCCAGT 59.130 41.667 0.00 0.00 0.00 4.00
214 215 6.040247 CGTGCAATAGAAGTAACATCCAGTA 58.960 40.000 0.00 0.00 0.00 2.74
215 216 6.199154 CGTGCAATAGAAGTAACATCCAGTAG 59.801 42.308 0.00 0.00 0.00 2.57
216 217 7.042335 GTGCAATAGAAGTAACATCCAGTAGT 58.958 38.462 0.00 0.00 0.00 2.73
217 218 7.549488 GTGCAATAGAAGTAACATCCAGTAGTT 59.451 37.037 0.00 0.00 0.00 2.24
218 219 8.100791 TGCAATAGAAGTAACATCCAGTAGTTT 58.899 33.333 0.00 0.00 0.00 2.66
219 220 8.947115 GCAATAGAAGTAACATCCAGTAGTTTT 58.053 33.333 0.00 0.00 0.00 2.43
222 223 7.964604 AGAAGTAACATCCAGTAGTTTTCAC 57.035 36.000 0.00 0.00 0.00 3.18
223 224 7.736893 AGAAGTAACATCCAGTAGTTTTCACT 58.263 34.615 0.00 0.00 36.99 3.41
224 225 7.873505 AGAAGTAACATCCAGTAGTTTTCACTC 59.126 37.037 0.00 0.00 34.06 3.51
225 226 7.062749 AGTAACATCCAGTAGTTTTCACTCA 57.937 36.000 0.00 0.00 34.06 3.41
226 227 7.680730 AGTAACATCCAGTAGTTTTCACTCAT 58.319 34.615 0.00 0.00 34.06 2.90
227 228 7.819900 AGTAACATCCAGTAGTTTTCACTCATC 59.180 37.037 0.00 0.00 34.06 2.92
228 229 6.114187 ACATCCAGTAGTTTTCACTCATCA 57.886 37.500 0.00 0.00 34.06 3.07
229 230 6.169094 ACATCCAGTAGTTTTCACTCATCAG 58.831 40.000 0.00 0.00 34.06 2.90
230 231 6.014242 ACATCCAGTAGTTTTCACTCATCAGA 60.014 38.462 0.00 0.00 34.06 3.27
231 232 5.784177 TCCAGTAGTTTTCACTCATCAGAC 58.216 41.667 0.00 0.00 34.06 3.51
232 233 5.304357 TCCAGTAGTTTTCACTCATCAGACA 59.696 40.000 0.00 0.00 34.06 3.41
233 234 6.014242 TCCAGTAGTTTTCACTCATCAGACAT 60.014 38.462 0.00 0.00 34.06 3.06
234 235 7.178451 TCCAGTAGTTTTCACTCATCAGACATA 59.822 37.037 0.00 0.00 34.06 2.29
235 236 7.490725 CCAGTAGTTTTCACTCATCAGACATAG 59.509 40.741 0.00 0.00 34.06 2.23
236 237 7.009999 CAGTAGTTTTCACTCATCAGACATAGC 59.990 40.741 0.00 0.00 34.06 2.97
237 238 5.798132 AGTTTTCACTCATCAGACATAGCA 58.202 37.500 0.00 0.00 0.00 3.49
238 239 6.413052 AGTTTTCACTCATCAGACATAGCAT 58.587 36.000 0.00 0.00 0.00 3.79
239 240 6.315642 AGTTTTCACTCATCAGACATAGCATG 59.684 38.462 0.00 0.00 0.00 4.06
240 241 3.725490 TCACTCATCAGACATAGCATGC 58.275 45.455 10.51 10.51 0.00 4.06
241 242 2.806818 CACTCATCAGACATAGCATGCC 59.193 50.000 15.66 0.00 0.00 4.40
242 243 2.436911 ACTCATCAGACATAGCATGCCA 59.563 45.455 15.66 0.00 0.00 4.92
243 244 2.806818 CTCATCAGACATAGCATGCCAC 59.193 50.000 15.66 1.53 0.00 5.01
244 245 2.171027 TCATCAGACATAGCATGCCACA 59.829 45.455 15.66 0.00 0.00 4.17
245 246 2.320745 TCAGACATAGCATGCCACAG 57.679 50.000 15.66 4.71 0.00 3.66
246 247 1.832998 TCAGACATAGCATGCCACAGA 59.167 47.619 15.66 0.71 0.00 3.41
247 248 2.236893 TCAGACATAGCATGCCACAGAA 59.763 45.455 15.66 0.00 0.00 3.02
248 249 2.353889 CAGACATAGCATGCCACAGAAC 59.646 50.000 15.66 0.41 0.00 3.01
249 250 2.238144 AGACATAGCATGCCACAGAACT 59.762 45.455 15.66 2.89 0.00 3.01
250 251 3.452264 AGACATAGCATGCCACAGAACTA 59.548 43.478 15.66 0.00 0.00 2.24
251 252 3.801698 ACATAGCATGCCACAGAACTAG 58.198 45.455 15.66 0.00 0.00 2.57
252 253 3.198635 ACATAGCATGCCACAGAACTAGT 59.801 43.478 15.66 0.00 0.00 2.57
253 254 2.105006 AGCATGCCACAGAACTAGTG 57.895 50.000 15.66 0.00 36.76 2.74
254 255 1.625315 AGCATGCCACAGAACTAGTGA 59.375 47.619 15.66 0.00 39.30 3.41
255 256 2.005451 GCATGCCACAGAACTAGTGAG 58.995 52.381 6.36 0.00 39.30 3.51
256 257 2.005451 CATGCCACAGAACTAGTGAGC 58.995 52.381 0.00 0.00 39.30 4.26
257 258 1.342074 TGCCACAGAACTAGTGAGCT 58.658 50.000 0.00 0.00 39.30 4.09
258 259 1.273606 TGCCACAGAACTAGTGAGCTC 59.726 52.381 6.82 6.82 39.30 4.09
259 260 1.548269 GCCACAGAACTAGTGAGCTCT 59.452 52.381 16.19 0.00 39.30 4.09
260 261 2.028567 GCCACAGAACTAGTGAGCTCTT 60.029 50.000 16.19 5.91 39.30 2.85
261 262 3.556004 GCCACAGAACTAGTGAGCTCTTT 60.556 47.826 16.19 5.53 39.30 2.52
262 263 4.636249 CCACAGAACTAGTGAGCTCTTTT 58.364 43.478 16.19 2.88 39.30 2.27
263 264 5.784177 CCACAGAACTAGTGAGCTCTTTTA 58.216 41.667 16.19 3.95 39.30 1.52
264 265 5.866633 CCACAGAACTAGTGAGCTCTTTTAG 59.133 44.000 16.19 14.97 39.30 1.85
265 266 7.555328 CCACAGAACTAGTGAGCTCTTTTAGC 61.555 46.154 16.19 0.00 41.61 3.09
266 267 9.819793 CCACAGAACTAGTGAGCTCTTTTAGCA 62.820 44.444 16.19 0.00 44.08 3.49
279 280 6.236017 CTCTTTTAGCAACGTTCCAATACA 57.764 37.500 0.00 0.00 0.00 2.29
280 281 6.621316 TCTTTTAGCAACGTTCCAATACAA 57.379 33.333 0.00 0.00 0.00 2.41
281 282 6.664515 TCTTTTAGCAACGTTCCAATACAAG 58.335 36.000 0.00 0.00 0.00 3.16
282 283 5.365403 TTTAGCAACGTTCCAATACAAGG 57.635 39.130 0.00 0.00 0.00 3.61
283 284 1.539827 AGCAACGTTCCAATACAAGGC 59.460 47.619 0.00 0.00 0.00 4.35
284 285 1.268352 GCAACGTTCCAATACAAGGCA 59.732 47.619 0.00 0.00 0.00 4.75
285 286 2.094752 GCAACGTTCCAATACAAGGCAT 60.095 45.455 0.00 0.00 0.00 4.40
286 287 3.127895 GCAACGTTCCAATACAAGGCATA 59.872 43.478 0.00 0.00 0.00 3.14
287 288 4.202010 GCAACGTTCCAATACAAGGCATAT 60.202 41.667 0.00 0.00 0.00 1.78
288 289 5.008217 GCAACGTTCCAATACAAGGCATATA 59.992 40.000 0.00 0.00 0.00 0.86
289 290 6.293955 GCAACGTTCCAATACAAGGCATATAT 60.294 38.462 0.00 0.00 0.00 0.86
290 291 7.298122 CAACGTTCCAATACAAGGCATATATC 58.702 38.462 0.00 0.00 0.00 1.63
291 292 6.530120 ACGTTCCAATACAAGGCATATATCA 58.470 36.000 0.00 0.00 0.00 2.15
292 293 6.995686 ACGTTCCAATACAAGGCATATATCAA 59.004 34.615 0.00 0.00 0.00 2.57
293 294 7.665559 ACGTTCCAATACAAGGCATATATCAAT 59.334 33.333 0.00 0.00 0.00 2.57
294 295 7.964559 CGTTCCAATACAAGGCATATATCAATG 59.035 37.037 0.00 0.00 0.00 2.82
295 296 8.796475 GTTCCAATACAAGGCATATATCAATGT 58.204 33.333 0.00 0.00 0.00 2.71
296 297 8.938801 TCCAATACAAGGCATATATCAATGTT 57.061 30.769 0.00 0.00 0.00 2.71
297 298 9.013229 TCCAATACAAGGCATATATCAATGTTC 57.987 33.333 0.00 0.00 0.00 3.18
298 299 9.017509 CCAATACAAGGCATATATCAATGTTCT 57.982 33.333 0.00 0.00 0.00 3.01
301 302 7.678947 ACAAGGCATATATCAATGTTCTAGC 57.321 36.000 0.00 0.00 0.00 3.42
302 303 6.656693 ACAAGGCATATATCAATGTTCTAGCC 59.343 38.462 0.00 0.00 38.65 3.93
303 304 6.633325 AGGCATATATCAATGTTCTAGCCT 57.367 37.500 0.00 0.00 43.38 4.58
304 305 6.413052 AGGCATATATCAATGTTCTAGCCTG 58.587 40.000 0.00 0.00 46.10 4.85
305 306 5.065731 GGCATATATCAATGTTCTAGCCTGC 59.934 44.000 0.00 0.00 35.63 4.85
306 307 5.879223 GCATATATCAATGTTCTAGCCTGCT 59.121 40.000 0.00 0.00 0.00 4.24
307 308 6.183360 GCATATATCAATGTTCTAGCCTGCTG 60.183 42.308 0.97 0.00 0.00 4.41
308 309 1.742761 TCAATGTTCTAGCCTGCTGC 58.257 50.000 0.97 0.00 41.71 5.25
317 318 3.583383 GCCTGCTGCGATGTTTCT 58.417 55.556 0.00 0.00 0.00 2.52
318 319 1.878775 GCCTGCTGCGATGTTTCTT 59.121 52.632 0.00 0.00 0.00 2.52
319 320 0.455633 GCCTGCTGCGATGTTTCTTG 60.456 55.000 0.00 0.00 0.00 3.02
320 321 1.159285 CCTGCTGCGATGTTTCTTGA 58.841 50.000 0.00 0.00 0.00 3.02
321 322 1.741706 CCTGCTGCGATGTTTCTTGAT 59.258 47.619 0.00 0.00 0.00 2.57
322 323 2.477357 CCTGCTGCGATGTTTCTTGATG 60.477 50.000 0.00 0.00 0.00 3.07
323 324 2.417586 CTGCTGCGATGTTTCTTGATGA 59.582 45.455 0.00 0.00 0.00 2.92
324 325 2.417586 TGCTGCGATGTTTCTTGATGAG 59.582 45.455 0.00 0.00 0.00 2.90
325 326 2.417933 GCTGCGATGTTTCTTGATGAGT 59.582 45.455 0.00 0.00 0.00 3.41
326 327 3.618594 GCTGCGATGTTTCTTGATGAGTA 59.381 43.478 0.00 0.00 0.00 2.59
327 328 4.272018 GCTGCGATGTTTCTTGATGAGTAT 59.728 41.667 0.00 0.00 0.00 2.12
328 329 5.557893 GCTGCGATGTTTCTTGATGAGTATC 60.558 44.000 0.00 0.00 0.00 2.24
329 330 4.811024 TGCGATGTTTCTTGATGAGTATCC 59.189 41.667 0.00 0.00 32.09 2.59
330 331 5.053145 GCGATGTTTCTTGATGAGTATCCT 58.947 41.667 0.00 0.00 32.09 3.24
331 332 5.176590 GCGATGTTTCTTGATGAGTATCCTC 59.823 44.000 0.00 0.00 38.27 3.71
332 333 6.511416 CGATGTTTCTTGATGAGTATCCTCT 58.489 40.000 0.00 0.00 38.61 3.69
333 334 6.983307 CGATGTTTCTTGATGAGTATCCTCTT 59.017 38.462 0.00 0.00 38.61 2.85
334 335 7.493971 CGATGTTTCTTGATGAGTATCCTCTTT 59.506 37.037 0.00 0.00 38.61 2.52
335 336 7.912056 TGTTTCTTGATGAGTATCCTCTTTG 57.088 36.000 0.00 0.00 38.61 2.77
336 337 7.453393 TGTTTCTTGATGAGTATCCTCTTTGT 58.547 34.615 0.00 0.00 38.61 2.83
337 338 7.939039 TGTTTCTTGATGAGTATCCTCTTTGTT 59.061 33.333 0.00 0.00 38.61 2.83
338 339 8.787852 GTTTCTTGATGAGTATCCTCTTTGTTT 58.212 33.333 0.00 0.00 38.61 2.83
339 340 8.924511 TTCTTGATGAGTATCCTCTTTGTTTT 57.075 30.769 0.00 0.00 38.61 2.43
340 341 8.553459 TCTTGATGAGTATCCTCTTTGTTTTC 57.447 34.615 0.00 0.00 38.61 2.29
341 342 6.968131 TGATGAGTATCCTCTTTGTTTTCG 57.032 37.500 0.00 0.00 38.61 3.46
342 343 6.464222 TGATGAGTATCCTCTTTGTTTTCGT 58.536 36.000 0.00 0.00 38.61 3.85
343 344 6.934645 TGATGAGTATCCTCTTTGTTTTCGTT 59.065 34.615 0.00 0.00 38.61 3.85
344 345 6.780706 TGAGTATCCTCTTTGTTTTCGTTC 57.219 37.500 0.00 0.00 38.61 3.95
345 346 6.522054 TGAGTATCCTCTTTGTTTTCGTTCT 58.478 36.000 0.00 0.00 38.61 3.01
346 347 6.423905 TGAGTATCCTCTTTGTTTTCGTTCTG 59.576 38.462 0.00 0.00 38.61 3.02
347 348 6.289064 AGTATCCTCTTTGTTTTCGTTCTGT 58.711 36.000 0.00 0.00 0.00 3.41
348 349 6.766467 AGTATCCTCTTTGTTTTCGTTCTGTT 59.234 34.615 0.00 0.00 0.00 3.16
349 350 5.890424 TCCTCTTTGTTTTCGTTCTGTTT 57.110 34.783 0.00 0.00 0.00 2.83
350 351 5.875930 TCCTCTTTGTTTTCGTTCTGTTTC 58.124 37.500 0.00 0.00 0.00 2.78
351 352 5.646360 TCCTCTTTGTTTTCGTTCTGTTTCT 59.354 36.000 0.00 0.00 0.00 2.52
352 353 6.150474 TCCTCTTTGTTTTCGTTCTGTTTCTT 59.850 34.615 0.00 0.00 0.00 2.52
353 354 7.334921 TCCTCTTTGTTTTCGTTCTGTTTCTTA 59.665 33.333 0.00 0.00 0.00 2.10
354 355 7.428472 CCTCTTTGTTTTCGTTCTGTTTCTTAC 59.572 37.037 0.00 0.00 0.00 2.34
355 356 7.245604 TCTTTGTTTTCGTTCTGTTTCTTACC 58.754 34.615 0.00 0.00 0.00 2.85
356 357 5.488645 TGTTTTCGTTCTGTTTCTTACCC 57.511 39.130 0.00 0.00 0.00 3.69
357 358 4.336153 TGTTTTCGTTCTGTTTCTTACCCC 59.664 41.667 0.00 0.00 0.00 4.95
358 359 3.842007 TTCGTTCTGTTTCTTACCCCA 57.158 42.857 0.00 0.00 0.00 4.96
359 360 3.396260 TCGTTCTGTTTCTTACCCCAG 57.604 47.619 0.00 0.00 0.00 4.45
360 361 1.804748 CGTTCTGTTTCTTACCCCAGC 59.195 52.381 0.00 0.00 0.00 4.85
361 362 2.160205 GTTCTGTTTCTTACCCCAGCC 58.840 52.381 0.00 0.00 0.00 4.85
362 363 1.742308 TCTGTTTCTTACCCCAGCCT 58.258 50.000 0.00 0.00 0.00 4.58
363 364 1.351017 TCTGTTTCTTACCCCAGCCTG 59.649 52.381 0.00 0.00 0.00 4.85
364 365 0.251165 TGTTTCTTACCCCAGCCTGC 60.251 55.000 0.00 0.00 0.00 4.85
365 366 1.002624 TTTCTTACCCCAGCCTGCG 60.003 57.895 0.00 0.00 0.00 5.18
366 367 1.774894 TTTCTTACCCCAGCCTGCGT 61.775 55.000 0.00 0.00 0.00 5.24
367 368 2.436646 CTTACCCCAGCCTGCGTG 60.437 66.667 0.00 0.00 0.00 5.34
368 369 4.715523 TTACCCCAGCCTGCGTGC 62.716 66.667 0.00 0.00 0.00 5.34
373 374 4.111016 CCAGCCTGCGTGCATGTG 62.111 66.667 7.93 1.02 0.00 3.21
374 375 3.359523 CAGCCTGCGTGCATGTGT 61.360 61.111 7.93 0.00 0.00 3.72
375 376 3.359523 AGCCTGCGTGCATGTGTG 61.360 61.111 7.93 0.00 0.00 3.82
376 377 3.356267 GCCTGCGTGCATGTGTGA 61.356 61.111 7.93 0.00 0.00 3.58
377 378 2.865308 CCTGCGTGCATGTGTGAG 59.135 61.111 7.93 0.00 0.00 3.51
378 379 2.683859 CCTGCGTGCATGTGTGAGG 61.684 63.158 7.93 4.61 0.00 3.86
379 380 2.669229 TGCGTGCATGTGTGAGGG 60.669 61.111 7.93 0.00 0.00 4.30
380 381 3.434319 GCGTGCATGTGTGAGGGG 61.434 66.667 7.93 0.00 0.00 4.79
381 382 2.032528 CGTGCATGTGTGAGGGGT 59.967 61.111 0.00 0.00 0.00 4.95
382 383 1.600636 CGTGCATGTGTGAGGGGTT 60.601 57.895 0.00 0.00 0.00 4.11
383 384 1.577328 CGTGCATGTGTGAGGGGTTC 61.577 60.000 0.00 0.00 0.00 3.62
384 385 1.074775 TGCATGTGTGAGGGGTTCC 59.925 57.895 0.00 0.00 0.00 3.62
385 386 1.678970 GCATGTGTGAGGGGTTCCC 60.679 63.158 0.00 0.00 45.90 3.97
395 396 3.596362 GGGGTTCCCAGGAGATTTG 57.404 57.895 10.25 0.00 44.65 2.32
396 397 0.704664 GGGGTTCCCAGGAGATTTGT 59.295 55.000 10.25 0.00 44.65 2.83
397 398 1.616994 GGGGTTCCCAGGAGATTTGTG 60.617 57.143 10.25 0.00 44.65 3.33
398 399 1.075536 GGGTTCCCAGGAGATTTGTGT 59.924 52.381 2.59 0.00 0.00 3.72
399 400 2.437413 GGTTCCCAGGAGATTTGTGTC 58.563 52.381 0.00 0.00 0.00 3.67
400 401 2.437413 GTTCCCAGGAGATTTGTGTCC 58.563 52.381 0.00 0.00 0.00 4.02
401 402 0.613260 TCCCAGGAGATTTGTGTCCG 59.387 55.000 0.00 0.00 37.97 4.79
402 403 1.026718 CCCAGGAGATTTGTGTCCGC 61.027 60.000 0.00 0.00 37.97 5.54
403 404 0.036010 CCAGGAGATTTGTGTCCGCT 60.036 55.000 0.00 0.00 37.97 5.52
404 405 1.611673 CCAGGAGATTTGTGTCCGCTT 60.612 52.381 0.00 0.00 37.97 4.68
405 406 2.354704 CCAGGAGATTTGTGTCCGCTTA 60.355 50.000 0.00 0.00 37.97 3.09
406 407 3.334691 CAGGAGATTTGTGTCCGCTTAA 58.665 45.455 0.00 0.00 37.97 1.85
407 408 3.941483 CAGGAGATTTGTGTCCGCTTAAT 59.059 43.478 0.00 0.00 37.97 1.40
408 409 5.116180 CAGGAGATTTGTGTCCGCTTAATA 58.884 41.667 0.00 0.00 37.97 0.98
409 410 5.760253 CAGGAGATTTGTGTCCGCTTAATAT 59.240 40.000 0.00 0.00 37.97 1.28
410 411 5.992217 AGGAGATTTGTGTCCGCTTAATATC 59.008 40.000 0.00 0.00 37.97 1.63
411 412 5.992217 GGAGATTTGTGTCCGCTTAATATCT 59.008 40.000 0.00 0.00 0.00 1.98
412 413 7.015292 AGGAGATTTGTGTCCGCTTAATATCTA 59.985 37.037 0.00 0.00 37.97 1.98
413 414 7.116519 GGAGATTTGTGTCCGCTTAATATCTAC 59.883 40.741 0.00 0.00 0.00 2.59
414 415 6.641314 AGATTTGTGTCCGCTTAATATCTACG 59.359 38.462 0.00 0.00 0.00 3.51
415 416 3.635331 TGTGTCCGCTTAATATCTACGC 58.365 45.455 0.00 0.00 0.00 4.42
416 417 2.985139 GTGTCCGCTTAATATCTACGCC 59.015 50.000 0.00 0.00 0.00 5.68
417 418 2.889045 TGTCCGCTTAATATCTACGCCT 59.111 45.455 0.00 0.00 0.00 5.52
418 419 3.319972 TGTCCGCTTAATATCTACGCCTT 59.680 43.478 0.00 0.00 0.00 4.35
419 420 3.919197 GTCCGCTTAATATCTACGCCTTC 59.081 47.826 0.00 0.00 0.00 3.46
420 421 3.825014 TCCGCTTAATATCTACGCCTTCT 59.175 43.478 0.00 0.00 0.00 2.85
421 422 3.921021 CCGCTTAATATCTACGCCTTCTG 59.079 47.826 0.00 0.00 0.00 3.02
422 423 4.547532 CGCTTAATATCTACGCCTTCTGT 58.452 43.478 0.00 0.00 0.00 3.41
423 424 5.335426 CCGCTTAATATCTACGCCTTCTGTA 60.335 44.000 0.00 0.00 0.00 2.74
424 425 6.147581 CGCTTAATATCTACGCCTTCTGTAA 58.852 40.000 0.00 0.00 0.00 2.41
425 426 6.639686 CGCTTAATATCTACGCCTTCTGTAAA 59.360 38.462 0.00 0.00 0.00 2.01
426 427 7.148950 CGCTTAATATCTACGCCTTCTGTAAAG 60.149 40.741 0.00 0.00 0.00 1.85
427 428 7.866393 GCTTAATATCTACGCCTTCTGTAAAGA 59.134 37.037 0.00 0.00 0.00 2.52
428 429 9.745880 CTTAATATCTACGCCTTCTGTAAAGAA 57.254 33.333 0.00 0.00 0.00 2.52
500 501 9.793252 AAATGTTTAGATCAGTGATGTAAATGC 57.207 29.630 28.30 20.21 39.03 3.56
501 502 8.743085 ATGTTTAGATCAGTGATGTAAATGCT 57.257 30.769 28.30 17.56 39.03 3.79
502 503 8.201554 TGTTTAGATCAGTGATGTAAATGCTC 57.798 34.615 28.30 19.43 39.03 4.26
503 504 8.043113 TGTTTAGATCAGTGATGTAAATGCTCT 58.957 33.333 28.30 13.42 39.03 4.09
504 505 9.534565 GTTTAGATCAGTGATGTAAATGCTCTA 57.465 33.333 28.30 12.57 39.03 2.43
506 507 9.755804 TTAGATCAGTGATGTAAATGCTCTAAG 57.244 33.333 17.82 0.00 30.84 2.18
507 508 7.790027 AGATCAGTGATGTAAATGCTCTAAGT 58.210 34.615 11.20 0.00 0.00 2.24
508 509 7.710044 AGATCAGTGATGTAAATGCTCTAAGTG 59.290 37.037 11.20 0.00 0.00 3.16
509 510 6.935167 TCAGTGATGTAAATGCTCTAAGTGA 58.065 36.000 0.00 0.00 0.00 3.41
510 511 6.813649 TCAGTGATGTAAATGCTCTAAGTGAC 59.186 38.462 0.00 0.00 0.00 3.67
511 512 6.036517 CAGTGATGTAAATGCTCTAAGTGACC 59.963 42.308 0.00 0.00 0.00 4.02
512 513 6.070538 AGTGATGTAAATGCTCTAAGTGACCT 60.071 38.462 0.00 0.00 0.00 3.85
513 514 7.124298 AGTGATGTAAATGCTCTAAGTGACCTA 59.876 37.037 0.00 0.00 0.00 3.08
514 515 7.928706 GTGATGTAAATGCTCTAAGTGACCTAT 59.071 37.037 0.00 0.00 0.00 2.57
515 516 8.144478 TGATGTAAATGCTCTAAGTGACCTATC 58.856 37.037 0.00 0.00 0.00 2.08
516 517 7.418337 TGTAAATGCTCTAAGTGACCTATCA 57.582 36.000 0.00 0.00 0.00 2.15
529 530 5.160607 TGACCTATCACACTTGTTTAGGG 57.839 43.478 15.10 4.34 35.59 3.53
530 531 4.595781 TGACCTATCACACTTGTTTAGGGT 59.404 41.667 15.10 6.76 42.81 4.34
531 532 5.072600 TGACCTATCACACTTGTTTAGGGTT 59.927 40.000 15.10 1.41 37.10 4.11
532 533 5.948842 ACCTATCACACTTGTTTAGGGTTT 58.051 37.500 15.10 0.00 37.10 3.27
533 534 6.370453 ACCTATCACACTTGTTTAGGGTTTT 58.630 36.000 15.10 0.00 37.10 2.43
534 535 6.837048 ACCTATCACACTTGTTTAGGGTTTTT 59.163 34.615 15.10 0.00 37.10 1.94
970 971 3.399181 CCGGCCCTGCAACTCCTA 61.399 66.667 0.00 0.00 0.00 2.94
1085 1086 6.136541 ACAACTCAACTTGGAAGATGAAAC 57.863 37.500 1.59 0.00 37.38 2.78
1179 1180 7.068716 GCAAGGGTTCATACTGATAAATCCTTT 59.931 37.037 0.00 0.00 0.00 3.11
1230 1231 3.289834 GCATGGAATCCGGCGCAT 61.290 61.111 10.83 0.00 0.00 4.73
1272 1273 0.249280 GCCCGAACCTTTTTGTGGTG 60.249 55.000 0.00 0.00 37.93 4.17
1273 1274 0.249280 CCCGAACCTTTTTGTGGTGC 60.249 55.000 0.00 0.00 37.93 5.01
1351 1354 2.340337 GGAATTGGCTTGTGTTGATGC 58.660 47.619 0.00 0.00 0.00 3.91
1383 1386 2.290896 TGGATTCACCAAAGCGGAAGAT 60.291 45.455 0.00 0.00 46.75 2.40
1476 1479 6.326064 ACATAGTAGAACATCTGCTCAGGAAT 59.674 38.462 1.12 0.00 38.75 3.01
1488 1491 5.605908 TCTGCTCAGGAATTCAGGAGATATT 59.394 40.000 22.60 0.00 30.39 1.28
1636 1639 2.096496 GTGCGCTATGAGAAACTTGCAT 59.904 45.455 9.73 0.00 33.25 3.96
1664 1667 1.965930 GCGTGTGTGGGCTGATTGA 60.966 57.895 0.00 0.00 0.00 2.57
1698 1701 1.001378 GAGTGTGGCAATGGTGTTCAC 60.001 52.381 0.00 0.00 34.10 3.18
1738 1741 0.833949 TGGCACCTGGTTATATGCGA 59.166 50.000 0.00 0.00 39.02 5.10
1746 1749 2.744202 CTGGTTATATGCGAATGGCCTC 59.256 50.000 3.32 0.00 42.61 4.70
1788 1791 3.846430 CCCGGGCGAGGTAGGAAC 61.846 72.222 8.08 0.00 0.00 3.62
1838 1844 1.540267 GAAGAACCCGGGAGAAAAAGC 59.460 52.381 32.02 6.52 0.00 3.51
1881 1887 0.256752 ATACTGCATCAAGCCCAGCA 59.743 50.000 0.00 0.00 44.83 4.41
1917 1923 1.068741 GACATACAGGTGGATCCGACC 59.931 57.143 19.96 19.96 41.99 4.79
1923 1929 2.050350 GGTGGATCCGACCGTGAGA 61.050 63.158 15.00 0.00 0.00 3.27
1932 1938 1.269998 CCGACCGTGAGAAAGAGACTT 59.730 52.381 0.00 0.00 0.00 3.01
1968 1974 1.384191 CCTTGGAGGGAACTTGGGG 59.616 63.158 0.00 0.00 44.43 4.96
1989 1995 1.089920 GCACTGATCCGAAGCATGTT 58.910 50.000 0.00 0.00 0.00 2.71
2018 2024 0.405973 ACCCAAGGAAAAGGAGAGGC 59.594 55.000 0.00 0.00 0.00 4.70
2033 2039 1.305802 AGGCTGGTACGGGTCATGA 60.306 57.895 0.00 0.00 33.56 3.07
2034 2040 0.691078 AGGCTGGTACGGGTCATGAT 60.691 55.000 0.00 0.00 33.56 2.45
2052 2058 0.105039 ATTCACCGGCTAGTAGCAGC 59.895 55.000 23.24 6.42 44.75 5.25
2057 2063 1.880340 CGGCTAGTAGCAGCAGCAC 60.880 63.158 23.24 3.56 44.75 4.40
2058 2064 1.880340 GGCTAGTAGCAGCAGCACG 60.880 63.158 23.24 0.00 44.75 5.34
2063 2069 0.534412 AGTAGCAGCAGCACGAAGAT 59.466 50.000 3.17 0.00 45.49 2.40
2217 2311 2.242196 CCTCTCTAAAGCCAATTCCCCA 59.758 50.000 0.00 0.00 0.00 4.96
2378 2472 1.944709 GCAAGTAACGGTGTTGGACTT 59.055 47.619 0.20 0.00 0.00 3.01
2497 2591 1.079612 CGCATGTGGAGTGCTCTGA 60.080 57.895 0.00 0.00 40.37 3.27
2514 2608 3.932580 GACCCATCTGCGTGCGACA 62.933 63.158 0.00 0.00 0.00 4.35
2609 2703 0.798776 CGGTCAGAGCACCAAATGAC 59.201 55.000 0.00 0.00 41.03 3.06
2644 2738 5.611796 TTGTTTGATGACATGTGAGCTAC 57.388 39.130 1.15 1.03 0.00 3.58
2652 2746 3.024547 GACATGTGAGCTACTGGACCTA 58.975 50.000 1.15 0.00 0.00 3.08
2689 2783 6.530601 ACCCCTTTACTTATGATAATGGCT 57.469 37.500 0.00 0.00 0.00 4.75
2716 2810 1.476291 GGGACAGAAACGTTTGGGTCT 60.476 52.381 27.26 15.13 0.00 3.85
2829 2923 1.740025 CCGGTTTTGATTCAGCTCTCC 59.260 52.381 0.00 0.00 0.00 3.71
2833 2927 3.366781 GGTTTTGATTCAGCTCTCCTTGC 60.367 47.826 0.00 0.00 0.00 4.01
3085 3179 7.840554 CTGATTTACAGTTGCAAGATGCAGATT 60.841 37.037 0.00 0.00 45.06 2.40
3127 3221 3.610040 TGCATCAGTTGGACGAACTAT 57.390 42.857 2.24 0.00 43.52 2.12
3129 3223 3.684305 TGCATCAGTTGGACGAACTATTG 59.316 43.478 2.24 5.21 43.52 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.254115 GCCTCTTTACAGTCCATTAAGGTT 58.746 41.667 0.00 0.00 39.02 3.50
1 2 4.324331 GGCCTCTTTACAGTCCATTAAGGT 60.324 45.833 0.00 0.00 39.02 3.50
5 6 4.288626 ACTTGGCCTCTTTACAGTCCATTA 59.711 41.667 3.32 0.00 0.00 1.90
6 7 3.074538 ACTTGGCCTCTTTACAGTCCATT 59.925 43.478 3.32 0.00 0.00 3.16
7 8 2.644798 ACTTGGCCTCTTTACAGTCCAT 59.355 45.455 3.32 0.00 0.00 3.41
9 10 2.861147 ACTTGGCCTCTTTACAGTCC 57.139 50.000 3.32 0.00 0.00 3.85
11 12 4.976540 AGTTACTTGGCCTCTTTACAGT 57.023 40.909 3.32 0.00 0.00 3.55
12 13 5.179555 GTCAAGTTACTTGGCCTCTTTACAG 59.820 44.000 22.82 0.00 39.83 2.74
13 14 5.061179 GTCAAGTTACTTGGCCTCTTTACA 58.939 41.667 22.82 0.00 39.83 2.41
14 15 5.061179 TGTCAAGTTACTTGGCCTCTTTAC 58.939 41.667 24.32 13.18 44.42 2.01
15 16 5.298989 TGTCAAGTTACTTGGCCTCTTTA 57.701 39.130 24.32 4.31 44.42 1.85
16 17 4.164843 TGTCAAGTTACTTGGCCTCTTT 57.835 40.909 24.32 0.00 44.42 2.52
17 18 3.857157 TGTCAAGTTACTTGGCCTCTT 57.143 42.857 24.32 0.00 44.42 2.85
18 19 3.857157 TTGTCAAGTTACTTGGCCTCT 57.143 42.857 24.32 0.00 44.42 3.69
19 20 4.911514 TTTTGTCAAGTTACTTGGCCTC 57.088 40.909 24.32 13.12 44.42 4.70
20 21 5.598417 AGATTTTTGTCAAGTTACTTGGCCT 59.402 36.000 24.32 11.70 44.42 5.19
21 22 5.691754 CAGATTTTTGTCAAGTTACTTGGCC 59.308 40.000 24.32 15.55 44.42 5.36
22 23 6.417930 GTCAGATTTTTGTCAAGTTACTTGGC 59.582 38.462 21.26 21.26 45.16 4.52
23 24 7.645340 CAGTCAGATTTTTGTCAAGTTACTTGG 59.355 37.037 22.82 6.72 41.33 3.61
24 25 8.397906 TCAGTCAGATTTTTGTCAAGTTACTTG 58.602 33.333 18.12 18.12 42.25 3.16
25 26 8.506168 TCAGTCAGATTTTTGTCAAGTTACTT 57.494 30.769 0.00 0.00 0.00 2.24
26 27 8.506168 TTCAGTCAGATTTTTGTCAAGTTACT 57.494 30.769 0.00 0.00 0.00 2.24
27 28 9.010366 GTTTCAGTCAGATTTTTGTCAAGTTAC 57.990 33.333 0.00 0.00 0.00 2.50
28 29 8.956426 AGTTTCAGTCAGATTTTTGTCAAGTTA 58.044 29.630 0.00 0.00 0.00 2.24
29 30 7.830739 AGTTTCAGTCAGATTTTTGTCAAGTT 58.169 30.769 0.00 0.00 0.00 2.66
30 31 7.396540 AGTTTCAGTCAGATTTTTGTCAAGT 57.603 32.000 0.00 0.00 0.00 3.16
31 32 7.970061 TGAAGTTTCAGTCAGATTTTTGTCAAG 59.030 33.333 0.00 0.00 32.50 3.02
32 33 7.825681 TGAAGTTTCAGTCAGATTTTTGTCAA 58.174 30.769 0.00 0.00 32.50 3.18
33 34 7.389803 TGAAGTTTCAGTCAGATTTTTGTCA 57.610 32.000 0.00 0.00 32.50 3.58
48 49 2.485479 GGCACCTCTGACTGAAGTTTCA 60.485 50.000 0.00 0.00 35.57 2.69
49 50 2.147150 GGCACCTCTGACTGAAGTTTC 58.853 52.381 0.00 0.00 0.00 2.78
50 51 1.541233 CGGCACCTCTGACTGAAGTTT 60.541 52.381 0.00 0.00 0.00 2.66
51 52 0.034059 CGGCACCTCTGACTGAAGTT 59.966 55.000 0.00 0.00 0.00 2.66
52 53 0.827925 TCGGCACCTCTGACTGAAGT 60.828 55.000 0.00 0.00 0.00 3.01
53 54 0.534412 ATCGGCACCTCTGACTGAAG 59.466 55.000 0.00 0.00 31.81 3.02
54 55 0.976641 AATCGGCACCTCTGACTGAA 59.023 50.000 0.00 0.00 31.81 3.02
55 56 0.976641 AAATCGGCACCTCTGACTGA 59.023 50.000 0.00 0.00 31.81 3.41
56 57 1.081892 CAAATCGGCACCTCTGACTG 58.918 55.000 0.00 0.00 31.81 3.51
57 58 0.687354 ACAAATCGGCACCTCTGACT 59.313 50.000 0.00 0.00 31.81 3.41
58 59 1.197721 CAACAAATCGGCACCTCTGAC 59.802 52.381 0.00 0.00 31.81 3.51
59 60 1.202758 ACAACAAATCGGCACCTCTGA 60.203 47.619 0.00 0.00 33.95 3.27
60 61 1.069022 CACAACAAATCGGCACCTCTG 60.069 52.381 0.00 0.00 0.00 3.35
61 62 1.202758 TCACAACAAATCGGCACCTCT 60.203 47.619 0.00 0.00 0.00 3.69
62 63 1.234821 TCACAACAAATCGGCACCTC 58.765 50.000 0.00 0.00 0.00 3.85
63 64 1.336755 GTTCACAACAAATCGGCACCT 59.663 47.619 0.00 0.00 0.00 4.00
64 65 1.336755 AGTTCACAACAAATCGGCACC 59.663 47.619 0.00 0.00 0.00 5.01
65 66 2.774439 AGTTCACAACAAATCGGCAC 57.226 45.000 0.00 0.00 0.00 5.01
66 67 5.446143 AAATAGTTCACAACAAATCGGCA 57.554 34.783 0.00 0.00 0.00 5.69
67 68 4.553429 CGAAATAGTTCACAACAAATCGGC 59.447 41.667 3.55 0.00 32.89 5.54
68 69 5.685841 ACGAAATAGTTCACAACAAATCGG 58.314 37.500 3.55 0.00 32.89 4.18
69 70 7.406832 CGAAACGAAATAGTTCACAACAAATCG 60.407 37.037 3.55 0.00 32.89 3.34
70 71 7.375017 ACGAAACGAAATAGTTCACAACAAATC 59.625 33.333 3.55 0.00 32.89 2.17
71 72 7.190871 ACGAAACGAAATAGTTCACAACAAAT 58.809 30.769 3.55 0.00 32.89 2.32
72 73 6.544622 ACGAAACGAAATAGTTCACAACAAA 58.455 32.000 3.55 0.00 32.89 2.83
73 74 6.109320 ACGAAACGAAATAGTTCACAACAA 57.891 33.333 3.55 0.00 32.89 2.83
74 75 5.721876 ACGAAACGAAATAGTTCACAACA 57.278 34.783 3.55 0.00 32.89 3.33
75 76 6.639212 TGTACGAAACGAAATAGTTCACAAC 58.361 36.000 3.55 0.00 32.89 3.32
76 77 6.825284 TGTACGAAACGAAATAGTTCACAA 57.175 33.333 3.55 0.00 32.89 3.33
77 78 7.062138 GGTATGTACGAAACGAAATAGTTCACA 59.938 37.037 3.55 0.00 32.89 3.58
78 79 7.062138 TGGTATGTACGAAACGAAATAGTTCAC 59.938 37.037 3.55 0.00 32.89 3.18
79 80 7.089538 TGGTATGTACGAAACGAAATAGTTCA 58.910 34.615 3.55 0.00 32.89 3.18
80 81 7.510428 TGGTATGTACGAAACGAAATAGTTC 57.490 36.000 0.00 0.00 32.43 3.01
81 82 7.887996 TTGGTATGTACGAAACGAAATAGTT 57.112 32.000 0.00 0.00 35.59 2.24
82 83 7.887996 TTTGGTATGTACGAAACGAAATAGT 57.112 32.000 0.00 0.00 30.63 2.12
83 84 8.385111 ACATTTGGTATGTACGAAACGAAATAG 58.615 33.333 11.75 9.91 36.87 1.73
84 85 8.169910 CACATTTGGTATGTACGAAACGAAATA 58.830 33.333 11.75 0.00 36.87 1.40
85 86 7.018826 CACATTTGGTATGTACGAAACGAAAT 58.981 34.615 3.06 8.31 36.87 2.17
86 87 6.364261 CACATTTGGTATGTACGAAACGAAA 58.636 36.000 3.06 5.25 36.87 3.46
87 88 5.615106 GCACATTTGGTATGTACGAAACGAA 60.615 40.000 3.06 0.00 36.87 3.85
88 89 4.143073 GCACATTTGGTATGTACGAAACGA 60.143 41.667 3.06 0.00 36.87 3.85
89 90 4.085884 GCACATTTGGTATGTACGAAACG 58.914 43.478 3.06 0.00 36.87 3.60
90 91 4.083217 TGGCACATTTGGTATGTACGAAAC 60.083 41.667 3.06 0.00 36.87 2.78
91 92 4.072839 TGGCACATTTGGTATGTACGAAA 58.927 39.130 3.42 3.42 38.07 3.46
92 93 3.676093 TGGCACATTTGGTATGTACGAA 58.324 40.909 0.00 0.00 0.00 3.85
93 94 3.055747 TCTGGCACATTTGGTATGTACGA 60.056 43.478 0.00 0.00 38.20 3.43
94 95 3.266636 TCTGGCACATTTGGTATGTACG 58.733 45.455 0.00 0.00 38.20 3.67
95 96 4.941263 TCTTCTGGCACATTTGGTATGTAC 59.059 41.667 0.00 0.00 38.20 2.90
96 97 5.172687 TCTTCTGGCACATTTGGTATGTA 57.827 39.130 0.00 0.00 38.20 2.29
97 98 4.012374 CTCTTCTGGCACATTTGGTATGT 58.988 43.478 0.00 0.00 38.20 2.29
98 99 3.181493 GCTCTTCTGGCACATTTGGTATG 60.181 47.826 0.00 0.00 38.20 2.39
99 100 3.019564 GCTCTTCTGGCACATTTGGTAT 58.980 45.455 0.00 0.00 38.20 2.73
100 101 2.224744 TGCTCTTCTGGCACATTTGGTA 60.225 45.455 0.00 0.00 38.20 3.25
101 102 1.251251 GCTCTTCTGGCACATTTGGT 58.749 50.000 0.00 0.00 38.20 3.67
102 103 1.250328 TGCTCTTCTGGCACATTTGG 58.750 50.000 0.00 0.00 38.20 3.28
103 104 4.157289 ACTTATGCTCTTCTGGCACATTTG 59.843 41.667 0.00 0.00 42.69 2.32
104 105 4.338879 ACTTATGCTCTTCTGGCACATTT 58.661 39.130 0.00 0.00 42.69 2.32
105 106 3.960571 ACTTATGCTCTTCTGGCACATT 58.039 40.909 0.00 0.00 42.69 2.71
106 107 3.641434 ACTTATGCTCTTCTGGCACAT 57.359 42.857 0.00 0.00 42.69 3.21
107 108 4.253685 GTTACTTATGCTCTTCTGGCACA 58.746 43.478 0.00 0.00 42.69 4.57
108 109 3.623510 GGTTACTTATGCTCTTCTGGCAC 59.376 47.826 0.00 0.00 42.69 5.01
109 110 3.678806 CGGTTACTTATGCTCTTCTGGCA 60.679 47.826 0.00 0.00 44.05 4.92
110 111 2.866762 CGGTTACTTATGCTCTTCTGGC 59.133 50.000 0.00 0.00 0.00 4.85
111 112 2.866762 GCGGTTACTTATGCTCTTCTGG 59.133 50.000 0.00 0.00 0.00 3.86
112 113 3.307242 GTGCGGTTACTTATGCTCTTCTG 59.693 47.826 0.00 0.00 0.00 3.02
113 114 3.522553 GTGCGGTTACTTATGCTCTTCT 58.477 45.455 0.00 0.00 0.00 2.85
114 115 2.608090 GGTGCGGTTACTTATGCTCTTC 59.392 50.000 0.00 0.00 0.00 2.87
115 116 2.629051 GGTGCGGTTACTTATGCTCTT 58.371 47.619 0.00 0.00 0.00 2.85
116 117 1.134491 GGGTGCGGTTACTTATGCTCT 60.134 52.381 0.00 0.00 0.00 4.09
117 118 1.296727 GGGTGCGGTTACTTATGCTC 58.703 55.000 0.00 0.00 0.00 4.26
118 119 0.616371 TGGGTGCGGTTACTTATGCT 59.384 50.000 0.00 0.00 0.00 3.79
119 120 1.333619 CATGGGTGCGGTTACTTATGC 59.666 52.381 0.00 0.00 0.00 3.14
120 121 2.639065 ACATGGGTGCGGTTACTTATG 58.361 47.619 0.00 0.00 0.00 1.90
121 122 3.181458 CCTACATGGGTGCGGTTACTTAT 60.181 47.826 0.00 0.00 0.00 1.73
122 123 2.168936 CCTACATGGGTGCGGTTACTTA 59.831 50.000 0.00 0.00 0.00 2.24
123 124 1.065709 CCTACATGGGTGCGGTTACTT 60.066 52.381 0.00 0.00 0.00 2.24
124 125 0.539986 CCTACATGGGTGCGGTTACT 59.460 55.000 0.00 0.00 0.00 2.24
125 126 1.093496 GCCTACATGGGTGCGGTTAC 61.093 60.000 0.00 0.00 36.00 2.50
126 127 1.222387 GCCTACATGGGTGCGGTTA 59.778 57.895 0.00 0.00 36.00 2.85
127 128 2.045340 GCCTACATGGGTGCGGTT 60.045 61.111 0.00 0.00 36.00 4.44
128 129 3.009115 AGCCTACATGGGTGCGGT 61.009 61.111 0.00 0.00 46.19 5.68
134 135 0.179034 GCTTGAGGAGCCTACATGGG 60.179 60.000 0.00 0.00 46.01 4.00
135 136 3.393472 GCTTGAGGAGCCTACATGG 57.607 57.895 0.00 0.00 46.01 3.66
144 145 2.634815 ACATATGCCAGCTTGAGGAG 57.365 50.000 1.58 0.00 0.00 3.69
145 146 3.041211 AGTACATATGCCAGCTTGAGGA 58.959 45.455 1.58 0.00 0.00 3.71
146 147 3.136763 CAGTACATATGCCAGCTTGAGG 58.863 50.000 1.58 0.00 0.00 3.86
147 148 4.063998 TCAGTACATATGCCAGCTTGAG 57.936 45.455 1.58 0.00 0.00 3.02
148 149 4.486125 TTCAGTACATATGCCAGCTTGA 57.514 40.909 1.58 0.00 0.00 3.02
149 150 4.818005 TCATTCAGTACATATGCCAGCTTG 59.182 41.667 1.58 0.00 0.00 4.01
150 151 5.039920 TCATTCAGTACATATGCCAGCTT 57.960 39.130 1.58 0.00 0.00 3.74
151 152 4.694760 TCATTCAGTACATATGCCAGCT 57.305 40.909 1.58 0.00 0.00 4.24
152 153 4.023707 GGTTCATTCAGTACATATGCCAGC 60.024 45.833 1.58 0.00 0.00 4.85
153 154 5.125356 TGGTTCATTCAGTACATATGCCAG 58.875 41.667 1.58 0.00 0.00 4.85
154 155 5.109500 TGGTTCATTCAGTACATATGCCA 57.891 39.130 1.58 0.00 0.00 4.92
155 156 6.639632 AATGGTTCATTCAGTACATATGCC 57.360 37.500 1.58 0.00 26.27 4.40
170 171 2.419159 CGCTCTGGAGATGAATGGTTCA 60.419 50.000 1.35 0.00 45.01 3.18
171 172 2.208431 CGCTCTGGAGATGAATGGTTC 58.792 52.381 1.35 0.00 0.00 3.62
172 173 1.556911 ACGCTCTGGAGATGAATGGTT 59.443 47.619 1.35 0.00 0.00 3.67
173 174 1.134580 CACGCTCTGGAGATGAATGGT 60.135 52.381 1.35 0.00 0.00 3.55
174 175 1.579698 CACGCTCTGGAGATGAATGG 58.420 55.000 1.35 0.00 0.00 3.16
175 176 0.935898 GCACGCTCTGGAGATGAATG 59.064 55.000 1.35 0.00 0.00 2.67
176 177 0.538584 TGCACGCTCTGGAGATGAAT 59.461 50.000 1.35 0.00 0.00 2.57
177 178 0.321346 TTGCACGCTCTGGAGATGAA 59.679 50.000 1.35 0.00 0.00 2.57
178 179 0.538584 ATTGCACGCTCTGGAGATGA 59.461 50.000 1.35 0.00 0.00 2.92
179 180 2.133553 CTATTGCACGCTCTGGAGATG 58.866 52.381 1.35 0.55 0.00 2.90
180 181 2.034878 TCTATTGCACGCTCTGGAGAT 58.965 47.619 1.35 0.00 0.00 2.75
181 182 1.474330 TCTATTGCACGCTCTGGAGA 58.526 50.000 1.35 0.00 0.00 3.71
182 183 2.200067 CTTCTATTGCACGCTCTGGAG 58.800 52.381 0.00 0.00 0.00 3.86
183 184 1.550524 ACTTCTATTGCACGCTCTGGA 59.449 47.619 0.00 0.00 0.00 3.86
184 185 2.015736 ACTTCTATTGCACGCTCTGG 57.984 50.000 0.00 0.00 0.00 3.86
185 186 3.926527 TGTTACTTCTATTGCACGCTCTG 59.073 43.478 0.00 0.00 0.00 3.35
186 187 4.188247 TGTTACTTCTATTGCACGCTCT 57.812 40.909 0.00 0.00 0.00 4.09
187 188 4.025647 GGATGTTACTTCTATTGCACGCTC 60.026 45.833 0.00 0.00 0.00 5.03
188 189 3.871594 GGATGTTACTTCTATTGCACGCT 59.128 43.478 0.00 0.00 0.00 5.07
189 190 3.621268 TGGATGTTACTTCTATTGCACGC 59.379 43.478 0.00 0.00 0.00 5.34
190 191 4.870426 ACTGGATGTTACTTCTATTGCACG 59.130 41.667 0.00 0.00 0.00 5.34
191 192 7.042335 ACTACTGGATGTTACTTCTATTGCAC 58.958 38.462 0.00 0.00 0.00 4.57
192 193 7.182817 ACTACTGGATGTTACTTCTATTGCA 57.817 36.000 0.00 0.00 0.00 4.08
193 194 8.494016 AAACTACTGGATGTTACTTCTATTGC 57.506 34.615 0.00 0.00 0.00 3.56
196 197 9.654663 GTGAAAACTACTGGATGTTACTTCTAT 57.345 33.333 0.00 0.00 0.00 1.98
197 198 8.867097 AGTGAAAACTACTGGATGTTACTTCTA 58.133 33.333 0.00 0.00 0.00 2.10
198 199 7.736893 AGTGAAAACTACTGGATGTTACTTCT 58.263 34.615 0.00 0.00 0.00 2.85
199 200 7.656137 TGAGTGAAAACTACTGGATGTTACTTC 59.344 37.037 0.00 0.00 0.00 3.01
200 201 7.506114 TGAGTGAAAACTACTGGATGTTACTT 58.494 34.615 0.00 0.00 0.00 2.24
201 202 7.062749 TGAGTGAAAACTACTGGATGTTACT 57.937 36.000 0.00 0.00 0.00 2.24
202 203 7.602644 TGATGAGTGAAAACTACTGGATGTTAC 59.397 37.037 0.00 0.00 0.00 2.50
203 204 7.676004 TGATGAGTGAAAACTACTGGATGTTA 58.324 34.615 0.00 0.00 0.00 2.41
204 205 6.533730 TGATGAGTGAAAACTACTGGATGTT 58.466 36.000 0.00 0.00 0.00 2.71
205 206 6.014242 TCTGATGAGTGAAAACTACTGGATGT 60.014 38.462 0.00 0.00 0.00 3.06
206 207 6.312426 GTCTGATGAGTGAAAACTACTGGATG 59.688 42.308 0.00 0.00 0.00 3.51
207 208 6.014242 TGTCTGATGAGTGAAAACTACTGGAT 60.014 38.462 0.00 0.00 0.00 3.41
208 209 5.304357 TGTCTGATGAGTGAAAACTACTGGA 59.696 40.000 0.00 0.00 0.00 3.86
209 210 5.541845 TGTCTGATGAGTGAAAACTACTGG 58.458 41.667 0.00 0.00 0.00 4.00
210 211 7.009999 GCTATGTCTGATGAGTGAAAACTACTG 59.990 40.741 0.00 0.00 0.00 2.74
211 212 7.038659 GCTATGTCTGATGAGTGAAAACTACT 58.961 38.462 0.00 0.00 0.00 2.57
212 213 6.813649 TGCTATGTCTGATGAGTGAAAACTAC 59.186 38.462 0.00 0.00 0.00 2.73
213 214 6.935167 TGCTATGTCTGATGAGTGAAAACTA 58.065 36.000 0.00 0.00 0.00 2.24
214 215 5.798132 TGCTATGTCTGATGAGTGAAAACT 58.202 37.500 0.00 0.00 0.00 2.66
215 216 6.484540 CATGCTATGTCTGATGAGTGAAAAC 58.515 40.000 0.00 0.00 0.00 2.43
216 217 5.065602 GCATGCTATGTCTGATGAGTGAAAA 59.934 40.000 11.37 0.00 0.00 2.29
217 218 4.573607 GCATGCTATGTCTGATGAGTGAAA 59.426 41.667 11.37 0.00 0.00 2.69
218 219 4.124970 GCATGCTATGTCTGATGAGTGAA 58.875 43.478 11.37 0.00 0.00 3.18
219 220 3.493873 GGCATGCTATGTCTGATGAGTGA 60.494 47.826 18.92 0.00 30.66 3.41
220 221 2.806818 GGCATGCTATGTCTGATGAGTG 59.193 50.000 18.92 0.00 30.66 3.51
221 222 2.436911 TGGCATGCTATGTCTGATGAGT 59.563 45.455 18.92 0.00 35.48 3.41
222 223 2.806818 GTGGCATGCTATGTCTGATGAG 59.193 50.000 18.92 0.00 35.48 2.90
223 224 2.171027 TGTGGCATGCTATGTCTGATGA 59.829 45.455 18.92 0.00 35.48 2.92
224 225 2.548480 CTGTGGCATGCTATGTCTGATG 59.452 50.000 18.92 0.00 35.48 3.07
225 226 2.436911 TCTGTGGCATGCTATGTCTGAT 59.563 45.455 18.92 0.00 35.48 2.90
226 227 1.832998 TCTGTGGCATGCTATGTCTGA 59.167 47.619 18.92 6.64 35.48 3.27
227 228 2.320745 TCTGTGGCATGCTATGTCTG 57.679 50.000 18.92 4.24 35.48 3.51
228 229 2.238144 AGTTCTGTGGCATGCTATGTCT 59.762 45.455 18.92 8.98 35.48 3.41
229 230 2.636830 AGTTCTGTGGCATGCTATGTC 58.363 47.619 18.92 0.00 34.88 3.06
230 231 2.795231 AGTTCTGTGGCATGCTATGT 57.205 45.000 18.92 0.00 0.00 2.29
231 232 3.558829 CACTAGTTCTGTGGCATGCTATG 59.441 47.826 18.92 9.07 0.00 2.23
232 233 3.452264 TCACTAGTTCTGTGGCATGCTAT 59.548 43.478 18.92 0.00 36.21 2.97
233 234 2.831526 TCACTAGTTCTGTGGCATGCTA 59.168 45.455 18.92 9.16 36.21 3.49
234 235 1.625315 TCACTAGTTCTGTGGCATGCT 59.375 47.619 18.92 0.00 36.21 3.79
235 236 2.005451 CTCACTAGTTCTGTGGCATGC 58.995 52.381 9.90 9.90 36.21 4.06
236 237 2.005451 GCTCACTAGTTCTGTGGCATG 58.995 52.381 0.00 0.00 36.21 4.06
237 238 1.905215 AGCTCACTAGTTCTGTGGCAT 59.095 47.619 0.00 0.00 35.56 4.40
238 239 1.273606 GAGCTCACTAGTTCTGTGGCA 59.726 52.381 9.40 0.00 35.56 4.92
239 240 1.548269 AGAGCTCACTAGTTCTGTGGC 59.452 52.381 17.77 0.00 41.30 5.01
240 241 3.951775 AAGAGCTCACTAGTTCTGTGG 57.048 47.619 17.77 0.00 41.94 4.17
241 242 6.942886 CTAAAAGAGCTCACTAGTTCTGTG 57.057 41.667 17.77 0.00 41.94 3.66
256 257 6.236017 TGTATTGGAACGTTGCTAAAAGAG 57.764 37.500 20.82 0.00 0.00 2.85
257 258 6.293735 CCTTGTATTGGAACGTTGCTAAAAGA 60.294 38.462 20.82 1.51 0.00 2.52
258 259 5.856455 CCTTGTATTGGAACGTTGCTAAAAG 59.144 40.000 20.82 14.70 0.00 2.27
259 260 5.764131 CCTTGTATTGGAACGTTGCTAAAA 58.236 37.500 20.82 7.41 0.00 1.52
260 261 4.320641 GCCTTGTATTGGAACGTTGCTAAA 60.321 41.667 20.82 8.15 0.00 1.85
261 262 3.189702 GCCTTGTATTGGAACGTTGCTAA 59.810 43.478 20.82 13.14 0.00 3.09
262 263 2.745281 GCCTTGTATTGGAACGTTGCTA 59.255 45.455 20.82 13.92 0.00 3.49
263 264 1.539827 GCCTTGTATTGGAACGTTGCT 59.460 47.619 20.82 4.03 0.00 3.91
264 265 1.268352 TGCCTTGTATTGGAACGTTGC 59.732 47.619 13.47 13.47 0.00 4.17
265 266 3.848272 ATGCCTTGTATTGGAACGTTG 57.152 42.857 5.00 0.00 0.00 4.10
266 267 6.995686 TGATATATGCCTTGTATTGGAACGTT 59.004 34.615 0.00 0.00 0.00 3.99
267 268 6.530120 TGATATATGCCTTGTATTGGAACGT 58.470 36.000 0.00 0.00 0.00 3.99
268 269 7.433708 TTGATATATGCCTTGTATTGGAACG 57.566 36.000 0.00 0.00 0.00 3.95
269 270 8.796475 ACATTGATATATGCCTTGTATTGGAAC 58.204 33.333 0.00 0.00 0.00 3.62
270 271 8.938801 ACATTGATATATGCCTTGTATTGGAA 57.061 30.769 0.00 0.00 0.00 3.53
271 272 8.938801 AACATTGATATATGCCTTGTATTGGA 57.061 30.769 0.00 0.00 0.00 3.53
272 273 9.017509 AGAACATTGATATATGCCTTGTATTGG 57.982 33.333 0.00 0.00 0.00 3.16
275 276 9.388506 GCTAGAACATTGATATATGCCTTGTAT 57.611 33.333 0.00 0.00 0.00 2.29
276 277 7.824289 GGCTAGAACATTGATATATGCCTTGTA 59.176 37.037 0.00 0.00 34.42 2.41
277 278 6.656693 GGCTAGAACATTGATATATGCCTTGT 59.343 38.462 0.00 0.00 34.42 3.16
278 279 6.883217 AGGCTAGAACATTGATATATGCCTTG 59.117 38.462 0.00 0.00 43.60 3.61
279 280 6.883217 CAGGCTAGAACATTGATATATGCCTT 59.117 38.462 0.00 0.00 43.60 4.35
280 281 6.413052 CAGGCTAGAACATTGATATATGCCT 58.587 40.000 0.00 0.00 46.50 4.75
281 282 5.065731 GCAGGCTAGAACATTGATATATGCC 59.934 44.000 0.00 0.00 37.15 4.40
282 283 5.879223 AGCAGGCTAGAACATTGATATATGC 59.121 40.000 0.00 0.00 0.00 3.14
283 284 6.183360 GCAGCAGGCTAGAACATTGATATATG 60.183 42.308 0.00 0.00 40.25 1.78
284 285 5.879223 GCAGCAGGCTAGAACATTGATATAT 59.121 40.000 0.00 0.00 40.25 0.86
285 286 5.240891 GCAGCAGGCTAGAACATTGATATA 58.759 41.667 0.00 0.00 40.25 0.86
286 287 4.070716 GCAGCAGGCTAGAACATTGATAT 58.929 43.478 0.00 0.00 40.25 1.63
287 288 3.470709 GCAGCAGGCTAGAACATTGATA 58.529 45.455 0.00 0.00 40.25 2.15
288 289 2.295885 GCAGCAGGCTAGAACATTGAT 58.704 47.619 0.00 0.00 40.25 2.57
289 290 1.742761 GCAGCAGGCTAGAACATTGA 58.257 50.000 0.00 0.00 40.25 2.57
290 291 0.376152 CGCAGCAGGCTAGAACATTG 59.624 55.000 0.00 0.00 41.67 2.82
291 292 0.250234 TCGCAGCAGGCTAGAACATT 59.750 50.000 0.00 0.00 41.67 2.71
292 293 0.467384 ATCGCAGCAGGCTAGAACAT 59.533 50.000 0.00 0.00 41.67 2.71
293 294 0.460811 CATCGCAGCAGGCTAGAACA 60.461 55.000 0.00 0.00 41.67 3.18
294 295 0.460987 ACATCGCAGCAGGCTAGAAC 60.461 55.000 0.00 0.00 41.67 3.01
295 296 0.250234 AACATCGCAGCAGGCTAGAA 59.750 50.000 0.00 0.00 41.67 2.10
296 297 0.250234 AAACATCGCAGCAGGCTAGA 59.750 50.000 0.00 0.00 41.67 2.43
297 298 0.654683 GAAACATCGCAGCAGGCTAG 59.345 55.000 0.00 0.00 41.67 3.42
298 299 0.250234 AGAAACATCGCAGCAGGCTA 59.750 50.000 0.00 0.00 41.67 3.93
299 300 0.607489 AAGAAACATCGCAGCAGGCT 60.607 50.000 0.00 0.00 41.67 4.58
300 301 0.455633 CAAGAAACATCGCAGCAGGC 60.456 55.000 0.00 0.00 39.90 4.85
301 302 1.159285 TCAAGAAACATCGCAGCAGG 58.841 50.000 0.00 0.00 0.00 4.85
302 303 2.417586 TCATCAAGAAACATCGCAGCAG 59.582 45.455 0.00 0.00 0.00 4.24
303 304 2.417586 CTCATCAAGAAACATCGCAGCA 59.582 45.455 0.00 0.00 0.00 4.41
304 305 2.417933 ACTCATCAAGAAACATCGCAGC 59.582 45.455 0.00 0.00 0.00 5.25
305 306 5.050499 GGATACTCATCAAGAAACATCGCAG 60.050 44.000 0.00 0.00 32.32 5.18
306 307 4.811024 GGATACTCATCAAGAAACATCGCA 59.189 41.667 0.00 0.00 32.32 5.10
307 308 5.335827 GGATACTCATCAAGAAACATCGC 57.664 43.478 0.00 0.00 32.32 4.58
324 325 6.541111 ACAGAACGAAAACAAAGAGGATAC 57.459 37.500 0.00 0.00 0.00 2.24
325 326 7.497909 AGAAACAGAACGAAAACAAAGAGGATA 59.502 33.333 0.00 0.00 0.00 2.59
326 327 6.318900 AGAAACAGAACGAAAACAAAGAGGAT 59.681 34.615 0.00 0.00 0.00 3.24
327 328 5.646360 AGAAACAGAACGAAAACAAAGAGGA 59.354 36.000 0.00 0.00 0.00 3.71
328 329 5.880341 AGAAACAGAACGAAAACAAAGAGG 58.120 37.500 0.00 0.00 0.00 3.69
329 330 7.428472 GGTAAGAAACAGAACGAAAACAAAGAG 59.572 37.037 0.00 0.00 0.00 2.85
330 331 7.245604 GGTAAGAAACAGAACGAAAACAAAGA 58.754 34.615 0.00 0.00 0.00 2.52
331 332 6.471198 GGGTAAGAAACAGAACGAAAACAAAG 59.529 38.462 0.00 0.00 0.00 2.77
332 333 6.324042 GGGTAAGAAACAGAACGAAAACAAA 58.676 36.000 0.00 0.00 0.00 2.83
333 334 5.163632 GGGGTAAGAAACAGAACGAAAACAA 60.164 40.000 0.00 0.00 0.00 2.83
334 335 4.336153 GGGGTAAGAAACAGAACGAAAACA 59.664 41.667 0.00 0.00 0.00 2.83
335 336 4.336153 TGGGGTAAGAAACAGAACGAAAAC 59.664 41.667 0.00 0.00 0.00 2.43
336 337 4.525024 TGGGGTAAGAAACAGAACGAAAA 58.475 39.130 0.00 0.00 0.00 2.29
337 338 4.131596 CTGGGGTAAGAAACAGAACGAAA 58.868 43.478 0.00 0.00 32.86 3.46
338 339 3.735591 CTGGGGTAAGAAACAGAACGAA 58.264 45.455 0.00 0.00 32.86 3.85
339 340 2.549349 GCTGGGGTAAGAAACAGAACGA 60.549 50.000 0.00 0.00 32.86 3.85
340 341 1.804748 GCTGGGGTAAGAAACAGAACG 59.195 52.381 0.00 0.00 32.86 3.95
341 342 2.160205 GGCTGGGGTAAGAAACAGAAC 58.840 52.381 0.00 0.00 32.86 3.01
342 343 2.062636 AGGCTGGGGTAAGAAACAGAA 58.937 47.619 0.00 0.00 32.86 3.02
343 344 1.351017 CAGGCTGGGGTAAGAAACAGA 59.649 52.381 6.61 0.00 32.86 3.41
344 345 1.826385 CAGGCTGGGGTAAGAAACAG 58.174 55.000 6.61 0.00 0.00 3.16
345 346 0.251165 GCAGGCTGGGGTAAGAAACA 60.251 55.000 17.64 0.00 0.00 2.83
346 347 1.305930 CGCAGGCTGGGGTAAGAAAC 61.306 60.000 22.71 0.00 0.00 2.78
347 348 1.002624 CGCAGGCTGGGGTAAGAAA 60.003 57.895 22.71 0.00 0.00 2.52
348 349 2.221299 ACGCAGGCTGGGGTAAGAA 61.221 57.895 31.43 0.00 34.28 2.52
349 350 2.606519 ACGCAGGCTGGGGTAAGA 60.607 61.111 31.43 0.00 34.28 2.10
350 351 2.436646 CACGCAGGCTGGGGTAAG 60.437 66.667 31.43 16.42 34.28 2.34
351 352 4.715523 GCACGCAGGCTGGGGTAA 62.716 66.667 31.43 0.00 34.28 2.85
356 357 4.111016 CACATGCACGCAGGCTGG 62.111 66.667 17.64 9.00 34.04 4.85
357 358 3.359523 ACACATGCACGCAGGCTG 61.360 61.111 10.94 10.94 34.04 4.85
358 359 3.359523 CACACATGCACGCAGGCT 61.360 61.111 3.18 0.00 34.04 4.58
359 360 3.318539 CTCACACATGCACGCAGGC 62.319 63.158 3.18 0.00 0.00 4.85
360 361 2.683859 CCTCACACATGCACGCAGG 61.684 63.158 1.52 1.52 0.00 4.85
361 362 2.683859 CCCTCACACATGCACGCAG 61.684 63.158 0.00 0.00 0.00 5.18
362 363 2.669229 CCCTCACACATGCACGCA 60.669 61.111 0.00 0.00 0.00 5.24
363 364 3.434319 CCCCTCACACATGCACGC 61.434 66.667 0.00 0.00 0.00 5.34
364 365 1.577328 GAACCCCTCACACATGCACG 61.577 60.000 0.00 0.00 0.00 5.34
365 366 1.244019 GGAACCCCTCACACATGCAC 61.244 60.000 0.00 0.00 0.00 4.57
366 367 1.074775 GGAACCCCTCACACATGCA 59.925 57.895 0.00 0.00 0.00 3.96
367 368 4.002797 GGAACCCCTCACACATGC 57.997 61.111 0.00 0.00 0.00 4.06
380 381 2.437413 GGACACAAATCTCCTGGGAAC 58.563 52.381 0.00 0.00 0.00 3.62
381 382 1.003118 CGGACACAAATCTCCTGGGAA 59.997 52.381 0.00 0.00 0.00 3.97
382 383 0.613260 CGGACACAAATCTCCTGGGA 59.387 55.000 0.00 0.00 0.00 4.37
383 384 1.026718 GCGGACACAAATCTCCTGGG 61.027 60.000 0.00 0.00 0.00 4.45
384 385 0.036010 AGCGGACACAAATCTCCTGG 60.036 55.000 0.00 0.00 0.00 4.45
385 386 1.813513 AAGCGGACACAAATCTCCTG 58.186 50.000 0.00 0.00 0.00 3.86
386 387 3.695830 TTAAGCGGACACAAATCTCCT 57.304 42.857 0.00 0.00 0.00 3.69
387 388 5.992217 AGATATTAAGCGGACACAAATCTCC 59.008 40.000 0.00 0.00 0.00 3.71
388 389 7.148950 CGTAGATATTAAGCGGACACAAATCTC 60.149 40.741 0.00 0.00 0.00 2.75
389 390 6.641314 CGTAGATATTAAGCGGACACAAATCT 59.359 38.462 0.00 0.00 0.00 2.40
390 391 6.615839 GCGTAGATATTAAGCGGACACAAATC 60.616 42.308 0.00 0.00 0.00 2.17
391 392 5.176958 GCGTAGATATTAAGCGGACACAAAT 59.823 40.000 0.00 0.00 0.00 2.32
392 393 4.505191 GCGTAGATATTAAGCGGACACAAA 59.495 41.667 0.00 0.00 0.00 2.83
393 394 4.046462 GCGTAGATATTAAGCGGACACAA 58.954 43.478 0.00 0.00 0.00 3.33
394 395 3.551454 GGCGTAGATATTAAGCGGACACA 60.551 47.826 0.00 0.00 0.00 3.72
395 396 2.985139 GGCGTAGATATTAAGCGGACAC 59.015 50.000 0.00 0.00 0.00 3.67
396 397 2.889045 AGGCGTAGATATTAAGCGGACA 59.111 45.455 0.00 0.00 0.00 4.02
397 398 3.572604 AGGCGTAGATATTAAGCGGAC 57.427 47.619 0.00 0.00 0.00 4.79
398 399 3.825014 AGAAGGCGTAGATATTAAGCGGA 59.175 43.478 0.00 0.00 0.00 5.54
399 400 3.921021 CAGAAGGCGTAGATATTAAGCGG 59.079 47.826 0.00 0.00 0.00 5.52
400 401 4.547532 ACAGAAGGCGTAGATATTAAGCG 58.452 43.478 0.00 0.00 0.00 4.68
401 402 7.866393 TCTTTACAGAAGGCGTAGATATTAAGC 59.134 37.037 0.00 0.00 0.00 3.09
402 403 9.745880 TTCTTTACAGAAGGCGTAGATATTAAG 57.254 33.333 0.00 0.00 33.80 1.85
474 475 9.793252 GCATTTACATCACTGATCTAAACATTT 57.207 29.630 2.59 0.00 0.00 2.32
475 476 9.182214 AGCATTTACATCACTGATCTAAACATT 57.818 29.630 2.59 0.00 0.00 2.71
476 477 8.743085 AGCATTTACATCACTGATCTAAACAT 57.257 30.769 2.59 0.00 0.00 2.71
477 478 8.043113 AGAGCATTTACATCACTGATCTAAACA 58.957 33.333 2.59 0.00 32.97 2.83
478 479 8.430801 AGAGCATTTACATCACTGATCTAAAC 57.569 34.615 2.59 0.00 32.97 2.01
480 481 9.755804 CTTAGAGCATTTACATCACTGATCTAA 57.244 33.333 8.33 8.33 41.61 2.10
481 482 8.918116 ACTTAGAGCATTTACATCACTGATCTA 58.082 33.333 0.00 0.00 36.01 1.98
482 483 7.710044 CACTTAGAGCATTTACATCACTGATCT 59.290 37.037 0.00 0.00 37.97 2.75
483 484 7.708322 TCACTTAGAGCATTTACATCACTGATC 59.292 37.037 0.00 0.00 0.00 2.92
484 485 7.493971 GTCACTTAGAGCATTTACATCACTGAT 59.506 37.037 0.00 0.00 0.00 2.90
485 486 6.813649 GTCACTTAGAGCATTTACATCACTGA 59.186 38.462 0.00 0.00 0.00 3.41
486 487 6.036517 GGTCACTTAGAGCATTTACATCACTG 59.963 42.308 0.00 0.00 44.14 3.66
487 488 6.109359 GGTCACTTAGAGCATTTACATCACT 58.891 40.000 0.00 0.00 44.14 3.41
488 489 6.351327 GGTCACTTAGAGCATTTACATCAC 57.649 41.667 0.00 0.00 44.14 3.06
507 508 4.595781 ACCCTAAACAAGTGTGATAGGTCA 59.404 41.667 16.50 0.00 36.73 4.02
508 509 5.161943 ACCCTAAACAAGTGTGATAGGTC 57.838 43.478 16.50 0.00 36.73 3.85
509 510 5.578157 AACCCTAAACAAGTGTGATAGGT 57.422 39.130 16.50 6.70 36.73 3.08
510 511 6.894339 AAAACCCTAAACAAGTGTGATAGG 57.106 37.500 13.14 13.14 37.48 2.57
936 937 1.830836 GGAGGGGAGGACGATTTCC 59.169 63.158 0.00 0.00 46.33 3.13
937 938 1.442148 CGGAGGGGAGGACGATTTC 59.558 63.158 0.00 0.00 0.00 2.17
938 939 3.630289 CGGAGGGGAGGACGATTT 58.370 61.111 0.00 0.00 0.00 2.17
970 971 0.338814 AGGGGGTTCATCGTACTCCT 59.661 55.000 0.00 0.00 36.35 3.69
1139 1140 1.451927 CTTGCAAGGGCGAGCCATA 60.452 57.895 19.14 0.00 44.27 2.74
1179 1180 1.552578 TGTAGAAGGCCGCTTGACTA 58.447 50.000 6.49 0.00 0.00 2.59
1230 1231 1.342174 ACAGGCCGAAAACTAACTCGA 59.658 47.619 0.00 0.00 37.23 4.04
1351 1354 2.154462 GGTGAATCCATCATAAGGGCG 58.846 52.381 0.00 0.00 40.97 6.13
1383 1386 0.243365 GCATGAAAACCATCGGCACA 59.757 50.000 0.00 0.00 31.94 4.57
1476 1479 6.618501 TCTCATCTCCAGAATATCTCCTGAA 58.381 40.000 0.00 0.00 32.37 3.02
1488 1491 4.301205 TCCCATTCAATCTCATCTCCAGA 58.699 43.478 0.00 0.00 0.00 3.86
1698 1701 6.092670 TGCCAAACTTCTTATCTTTCTCATCG 59.907 38.462 0.00 0.00 0.00 3.84
1738 1741 4.415596 TGTTGAGGTTTATTGAGGCCATT 58.584 39.130 5.01 0.00 0.00 3.16
1788 1791 2.437359 CCAGAAGGCTGCTTCGGG 60.437 66.667 13.21 13.21 40.97 5.14
1838 1844 0.898320 AACCTCAGGATCAGTCACCG 59.102 55.000 0.00 0.00 0.00 4.94
1887 1893 0.673333 CCTGTATGTCTGCACGGCAA 60.673 55.000 0.35 0.00 38.41 4.52
1893 1899 1.486310 GGATCCACCTGTATGTCTGCA 59.514 52.381 6.95 0.00 35.41 4.41
1917 1923 3.120408 CCATTGCAAGTCTCTTTCTCACG 60.120 47.826 4.94 0.00 0.00 4.35
1968 1974 1.153086 ATGCTTCGGATCAGTGCCC 60.153 57.895 0.00 0.00 0.00 5.36
1971 1977 3.495193 CAAAACATGCTTCGGATCAGTG 58.505 45.455 0.00 0.00 0.00 3.66
1974 1980 1.202114 GCCAAAACATGCTTCGGATCA 59.798 47.619 0.00 0.00 0.00 2.92
1975 1981 1.469767 GGCCAAAACATGCTTCGGATC 60.470 52.381 0.00 0.00 0.00 3.36
1977 1983 0.539438 AGGCCAAAACATGCTTCGGA 60.539 50.000 5.01 0.00 0.00 4.55
1981 1987 2.038426 GGGTTAAGGCCAAAACATGCTT 59.962 45.455 18.63 0.00 0.00 3.91
2018 2024 2.550978 GTGAATCATGACCCGTACCAG 58.449 52.381 0.00 0.00 0.00 4.00
2033 2039 0.105039 GCTGCTACTAGCCGGTGAAT 59.895 55.000 1.90 0.00 41.51 2.57
2034 2040 1.254975 TGCTGCTACTAGCCGGTGAA 61.255 55.000 1.90 0.00 41.51 3.18
2052 2058 2.299993 TCCTTGCTATCTTCGTGCTG 57.700 50.000 0.00 0.00 0.00 4.41
2057 2063 3.742433 ACTCCATCCTTGCTATCTTCG 57.258 47.619 0.00 0.00 0.00 3.79
2058 2064 6.162777 GTCATACTCCATCCTTGCTATCTTC 58.837 44.000 0.00 0.00 0.00 2.87
2063 2069 2.628178 CCGTCATACTCCATCCTTGCTA 59.372 50.000 0.00 0.00 0.00 3.49
2217 2311 4.522789 GTCTCAGAGAGAAAGACAAGTCCT 59.477 45.833 0.00 0.00 40.59 3.85
2378 2472 2.684374 ACGTCTATATACCGTGCACACA 59.316 45.455 18.64 0.53 32.86 3.72
2402 2496 4.202441 GTCACCAGCAATATCCACAATCT 58.798 43.478 0.00 0.00 0.00 2.40
2497 2591 3.315142 ATGTCGCACGCAGATGGGT 62.315 57.895 0.00 0.00 42.22 4.51
2514 2608 1.660560 CTAACCACGGGTCCGACGAT 61.661 60.000 16.90 2.91 42.83 3.73
2609 2703 1.604755 TCAAACAATCCCGGAACAACG 59.395 47.619 0.73 0.00 0.00 4.10
2644 2738 0.107654 CCCGAAAAGCCTAGGTCCAG 60.108 60.000 11.31 0.00 0.00 3.86
2689 2783 0.758123 ACGTTTCTGTCCCCCGTTTA 59.242 50.000 0.00 0.00 0.00 2.01
2716 2810 1.005748 CGCAGGCTCTGTCAAGTCA 60.006 57.895 4.45 0.00 33.43 3.41
2829 2923 0.036952 TTCTCTTCGGCTCCAGCAAG 60.037 55.000 0.03 0.00 44.36 4.01
2833 2927 0.108424 CTGGTTCTCTTCGGCTCCAG 60.108 60.000 0.00 0.00 36.87 3.86
3000 3094 3.487372 GTGGCCAAAGTTCTCCTTACTT 58.513 45.455 7.24 0.00 37.43 2.24
3085 3179 2.488204 TTCTGCCGGATCAATGTTCA 57.512 45.000 5.05 0.00 0.00 3.18
3090 3184 2.877043 GCATTTTCTGCCGGATCAAT 57.123 45.000 5.05 0.00 45.66 2.57
3115 3209 3.833650 TCCCTGTACAATAGTTCGTCCAA 59.166 43.478 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.