Multiple sequence alignment - TraesCS2D01G459100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G459100 chr2D 100.000 4339 0 0 1 4339 565762005 565757667 0.000000e+00 8013.0
1 TraesCS2D01G459100 chr2D 82.196 938 85 39 2887 3790 565695067 565694178 0.000000e+00 732.0
2 TraesCS2D01G459100 chr2D 86.105 475 27 7 3793 4253 565694232 565693783 3.930000e-130 475.0
3 TraesCS2D01G459100 chr2D 82.991 535 54 23 2896 3417 565590902 565590392 2.380000e-122 449.0
4 TraesCS2D01G459100 chr2D 89.836 305 15 13 3123 3417 642783280 642783578 1.140000e-100 377.0
5 TraesCS2D01G459100 chr2D 87.227 321 39 2 1412 1732 565695509 565695191 8.870000e-97 364.0
6 TraesCS2D01G459100 chr2D 84.169 379 40 8 1424 1782 565862688 565862310 2.480000e-92 350.0
7 TraesCS2D01G459100 chr2D 84.571 350 31 11 2095 2429 642782796 642783137 4.180000e-85 326.0
8 TraesCS2D01G459100 chr2D 82.289 367 38 16 2049 2398 565861399 565861043 4.240000e-75 292.0
9 TraesCS2D01G459100 chr2D 81.667 360 42 11 2796 3149 642782800 642783141 1.190000e-70 278.0
10 TraesCS2D01G459100 chr2D 82.493 337 35 14 2802 3129 565861351 565861030 1.540000e-69 274.0
11 TraesCS2D01G459100 chr2D 75.937 694 74 40 476 1130 565599314 565598675 1.990000e-68 270.0
12 TraesCS2D01G459100 chr2D 89.894 188 15 4 945 1132 565695841 565695658 5.610000e-59 239.0
13 TraesCS2D01G459100 chr2D 78.963 347 43 21 790 1116 642781508 642781844 4.400000e-50 209.0
14 TraesCS2D01G459100 chr2D 86.813 182 19 4 2227 2404 565861635 565861455 9.520000e-47 198.0
15 TraesCS2D01G459100 chr2D 87.037 162 15 4 2799 2956 565861868 565861709 1.240000e-40 178.0
16 TraesCS2D01G459100 chr2D 84.028 144 20 3 2080 2220 565759720 565759577 7.570000e-28 135.0
17 TraesCS2D01G459100 chr2D 85.455 110 11 3 2799 2904 565694935 565694827 4.590000e-20 110.0
18 TraesCS2D01G459100 chr2D 96.296 54 2 0 3737 3790 565758213 565758160 5.980000e-14 89.8
19 TraesCS2D01G459100 chr2D 96.296 54 2 0 3793 3846 565758269 565758216 5.980000e-14 89.8
20 TraesCS2D01G459100 chr2A 86.653 1978 107 55 10 1876 706003858 706001927 0.000000e+00 2045.0
21 TraesCS2D01G459100 chr2A 96.114 875 18 5 2920 3790 706001357 706000495 0.000000e+00 1413.0
22 TraesCS2D01G459100 chr2A 98.034 407 5 2 2024 2429 706001905 706001501 0.000000e+00 704.0
23 TraesCS2D01G459100 chr2A 82.561 820 91 28 934 1732 705936235 705935447 0.000000e+00 675.0
24 TraesCS2D01G459100 chr2A 81.472 788 72 38 2985 3730 705926989 705926234 2.910000e-161 579.0
25 TraesCS2D01G459100 chr2A 93.460 367 20 3 3793 4155 706000548 706000182 3.820000e-150 542.0
26 TraesCS2D01G459100 chr2A 86.711 301 40 0 1425 1725 706202349 706202049 6.950000e-88 335.0
27 TraesCS2D01G459100 chr2A 91.705 217 15 2 3199 3413 706200566 706200351 9.120000e-77 298.0
28 TraesCS2D01G459100 chr2A 90.062 161 10 3 4180 4339 706000190 706000035 2.050000e-48 204.0
29 TraesCS2D01G459100 chr2A 83.408 223 28 8 934 1153 706202742 706202526 9.520000e-47 198.0
30 TraesCS2D01G459100 chr2A 84.112 214 19 6 2227 2428 706001346 706001136 4.430000e-45 193.0
31 TraesCS2D01G459100 chr2A 79.798 297 31 20 2080 2360 706001642 706001359 5.730000e-44 189.0
32 TraesCS2D01G459100 chr2A 77.119 354 47 22 2810 3149 706201778 706201445 1.600000e-39 174.0
33 TraesCS2D01G459100 chr2A 75.819 397 56 23 2543 2921 706001505 706001131 9.650000e-37 165.0
34 TraesCS2D01G459100 chr2A 95.000 100 5 0 1872 1971 539014600 539014699 1.620000e-34 158.0
35 TraesCS2D01G459100 chr2A 93.333 105 7 0 1874 1978 606523708 606523812 5.810000e-34 156.0
36 TraesCS2D01G459100 chr2A 89.431 123 11 1 2427 2547 729162120 729161998 2.090000e-33 154.0
37 TraesCS2D01G459100 chr2A 87.288 118 8 4 4029 4139 705925993 705925876 1.270000e-25 128.0
38 TraesCS2D01G459100 chr2A 83.333 108 13 3 2854 2956 705935355 705935248 1.280000e-15 95.3
39 TraesCS2D01G459100 chr2A 93.478 46 3 0 1737 1782 706201859 706201814 7.790000e-08 69.4
40 TraesCS2D01G459100 chr2A 93.478 46 3 0 1737 1782 706202009 706201964 7.790000e-08 69.4
41 TraesCS2D01G459100 chr2B 91.032 1182 48 21 2638 3791 678089121 678087970 0.000000e+00 1543.0
42 TraesCS2D01G459100 chr2B 89.703 1214 46 30 2543 3707 677955183 677956366 0.000000e+00 1476.0
43 TraesCS2D01G459100 chr2B 85.514 1353 84 41 539 1848 677953248 677954531 0.000000e+00 1310.0
44 TraesCS2D01G459100 chr2B 87.536 1043 61 33 718 1732 678090214 678089213 0.000000e+00 1142.0
45 TraesCS2D01G459100 chr2B 87.934 547 33 15 3793 4326 678088025 678087499 7.970000e-172 614.0
46 TraesCS2D01G459100 chr2B 87.429 525 29 8 3821 4328 677956398 677956902 1.750000e-158 569.0
47 TraesCS2D01G459100 chr2B 89.009 464 37 12 252 709 678197296 678196841 2.930000e-156 562.0
48 TraesCS2D01G459100 chr2B 81.129 673 72 34 1187 1825 678069943 678069292 5.040000e-134 488.0
49 TraesCS2D01G459100 chr2B 82.576 528 44 23 3206 3707 678068688 678068183 5.190000e-114 422.0
50 TraesCS2D01G459100 chr2B 93.077 260 6 5 1969 2221 677954835 677955089 1.910000e-98 370.0
51 TraesCS2D01G459100 chr2B 89.298 299 20 10 252 541 677952872 677953167 8.870000e-97 364.0
52 TraesCS2D01G459100 chr2B 81.856 485 39 27 3199 3638 678198082 678197602 3.190000e-96 363.0
53 TraesCS2D01G459100 chr2B 84.800 375 40 4 1425 1782 678199646 678199272 1.150000e-95 361.0
54 TraesCS2D01G459100 chr2B 79.175 485 59 23 1969 2428 678089066 678088599 9.120000e-77 298.0
55 TraesCS2D01G459100 chr2B 79.675 369 44 17 2799 3149 678199026 678198671 2.020000e-58 237.0
56 TraesCS2D01G459100 chr2B 92.617 149 9 2 984 1132 678070178 678070032 3.400000e-51 213.0
57 TraesCS2D01G459100 chr2B 86.857 175 6 3 4155 4328 678067968 678067810 3.450000e-41 180.0
58 TraesCS2D01G459100 chr2B 81.081 222 22 13 3500 3720 677952413 677952615 4.490000e-35 159.0
59 TraesCS2D01G459100 chr2B 86.184 152 13 5 2254 2397 678069116 678068965 1.620000e-34 158.0
60 TraesCS2D01G459100 chr2B 88.235 136 9 2 3980 4108 678068117 678067982 5.810000e-34 156.0
61 TraesCS2D01G459100 chr2B 88.636 132 8 5 2415 2541 248147225 248147354 2.090000e-33 154.0
62 TraesCS2D01G459100 chr2B 83.846 130 6 6 4026 4140 678079776 678079647 4.590000e-20 110.0
63 TraesCS2D01G459100 chr2B 80.272 147 17 7 3608 3751 677952401 677952264 2.760000e-17 100.0
64 TraesCS2D01G459100 chr1B 86.772 189 22 3 2219 2405 3844561 3844748 1.580000e-49 207.0
65 TraesCS2D01G459100 chr3D 96.522 115 4 0 2427 2541 311663361 311663247 1.590000e-44 191.0
66 TraesCS2D01G459100 chr3D 95.960 99 4 0 1872 1970 14846769 14846671 1.250000e-35 161.0
67 TraesCS2D01G459100 chr3D 91.525 118 8 2 2426 2541 107670962 107671079 1.250000e-35 161.0
68 TraesCS2D01G459100 chr5D 97.248 109 3 0 2433 2541 345684108 345684000 7.410000e-43 185.0
69 TraesCS2D01G459100 chr7B 90.984 122 9 1 2422 2541 143329519 143329398 3.470000e-36 163.0
70 TraesCS2D01G459100 chr4D 95.050 101 5 0 1872 1972 54482091 54481991 4.490000e-35 159.0
71 TraesCS2D01G459100 chr4D 94.949 99 5 0 1872 1970 385849286 385849188 5.810000e-34 156.0
72 TraesCS2D01G459100 chr3A 93.396 106 7 0 1872 1977 203993411 203993516 1.620000e-34 158.0
73 TraesCS2D01G459100 chr3A 90.435 115 8 3 1874 1987 607108161 607108049 9.720000e-32 148.0
74 TraesCS2D01G459100 chr1A 94.059 101 6 0 1872 1972 465208517 465208617 2.090000e-33 154.0
75 TraesCS2D01G459100 chr1A 89.431 123 11 2 2419 2541 471505481 471505361 2.090000e-33 154.0
76 TraesCS2D01G459100 chr7A 93.204 103 7 0 1872 1974 599805417 599805315 7.520000e-33 152.0
77 TraesCS2D01G459100 chr6B 88.550 131 6 4 2425 2554 17403015 17403137 2.700000e-32 150.0
78 TraesCS2D01G459100 chr1D 86.620 142 11 6 2410 2547 240590489 240590626 2.700000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G459100 chr2D 565757667 565762005 4338 True 2081.900 8013 94.155000 1 4339 4 chr2D.!!$R4 4338
1 TraesCS2D01G459100 chr2D 565590392 565590902 510 True 449.000 449 82.991000 2896 3417 1 chr2D.!!$R1 521
2 TraesCS2D01G459100 chr2D 565693783 565695841 2058 True 384.000 732 86.175400 945 4253 5 chr2D.!!$R3 3308
3 TraesCS2D01G459100 chr2D 642781508 642783578 2070 False 297.500 377 83.759250 790 3417 4 chr2D.!!$F1 2627
4 TraesCS2D01G459100 chr2D 565598675 565599314 639 True 270.000 270 75.937000 476 1130 1 chr2D.!!$R2 654
5 TraesCS2D01G459100 chr2D 565861030 565862688 1658 True 258.400 350 84.560200 1424 3129 5 chr2D.!!$R5 1705
6 TraesCS2D01G459100 chr2A 706000035 706003858 3823 True 681.875 2045 88.006500 10 4339 8 chr2A.!!$R4 4329
7 TraesCS2D01G459100 chr2A 705935248 705936235 987 True 385.150 675 82.947000 934 2956 2 chr2A.!!$R3 2022
8 TraesCS2D01G459100 chr2A 705925876 705926989 1113 True 353.500 579 84.380000 2985 4139 2 chr2A.!!$R2 1154
9 TraesCS2D01G459100 chr2B 678087499 678090214 2715 True 899.250 1543 86.419250 718 4326 4 chr2B.!!$R4 3608
10 TraesCS2D01G459100 chr2B 677952413 677956902 4489 False 708.000 1476 87.683667 252 4328 6 chr2B.!!$F2 4076
11 TraesCS2D01G459100 chr2B 678196841 678199646 2805 True 380.750 562 83.835000 252 3638 4 chr2B.!!$R5 3386
12 TraesCS2D01G459100 chr2B 678067810 678070178 2368 True 269.500 488 86.266333 984 4328 6 chr2B.!!$R3 3344

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 160 0.111253 AGGACCCAGAGGCAAAGTTG 59.889 55.0 0.0 0.0 36.11 3.16 F
1893 2952 0.110486 TTGTCCCAGCCTTGTTCCTC 59.890 55.0 0.0 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1946 3005 0.036875 CCCTCCGTCTGGAAAAGCTT 59.963 55.0 0.0 0.0 45.87 3.74 R
3774 6970 0.179004 TCGTCAGGTGGCATTTGGTT 60.179 50.0 0.0 0.0 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.869690 GACGTCTTTGAGCTTGGGC 59.130 57.895 8.70 0.00 39.06 5.36
32 33 0.960364 TTGGGCCTGAATTGCGTCTC 60.960 55.000 4.53 0.00 0.00 3.36
62 63 8.181487 TGTAGAAACGCTATAATCTTTGACAC 57.819 34.615 0.00 0.00 0.00 3.67
142 145 5.596845 TGGTCTGTTTTGCAAATAAAGGAC 58.403 37.500 13.65 15.21 0.00 3.85
157 160 0.111253 AGGACCCAGAGGCAAAGTTG 59.889 55.000 0.00 0.00 36.11 3.16
163 166 1.002468 CCAGAGGCAAAGTTGTTGACG 60.002 52.381 0.00 0.00 31.33 4.35
166 169 1.871039 GAGGCAAAGTTGTTGACGCTA 59.129 47.619 0.00 0.00 31.33 4.26
513 729 4.559502 CGAGAGGTTCAGATTGACACTTCA 60.560 45.833 0.00 0.00 0.00 3.02
541 840 7.388437 AGGTTTGACCGTTCATATTAGTTACA 58.612 34.615 0.00 0.00 44.90 2.41
621 943 5.717078 ACGGAATACTGCGAATATAGGAA 57.283 39.130 0.00 0.00 38.98 3.36
629 951 5.057149 ACTGCGAATATAGGAACCATGTTC 58.943 41.667 0.00 0.00 0.00 3.18
704 1026 9.070149 GCTTTTAAGACATTGTGAGATCATTTC 57.930 33.333 0.00 0.00 0.00 2.17
738 1116 5.726980 TCAGATCATTTGGTTTGGAAAGG 57.273 39.130 0.00 0.00 0.00 3.11
785 1164 2.875672 GCCAAATCTGTAGAGTGTGGCA 60.876 50.000 19.97 0.00 41.39 4.92
881 1286 3.151022 CGCCTCCTCCTCCACTCC 61.151 72.222 0.00 0.00 0.00 3.85
937 1348 2.004120 ACTTCCACCACCACCACCA 61.004 57.895 0.00 0.00 0.00 4.17
938 1349 1.228245 CTTCCACCACCACCACCAG 60.228 63.158 0.00 0.00 0.00 4.00
939 1350 1.994885 CTTCCACCACCACCACCAGT 61.995 60.000 0.00 0.00 0.00 4.00
1063 1498 2.676822 AGGTGGAGAGCTTCGCGA 60.677 61.111 3.71 3.71 0.00 5.87
1069 1504 4.117661 AGAGCTTCGCGACCGTCC 62.118 66.667 9.15 0.00 35.54 4.79
1131 1574 4.052229 CCGCCTTCGTCCGTGACT 62.052 66.667 3.15 0.00 0.00 3.41
1166 1609 1.001887 GCCGGGGATGGTTGTGTTA 60.002 57.895 2.18 0.00 0.00 2.41
1220 1858 0.467290 AGAGCAGATCGTCCTCCCTC 60.467 60.000 6.67 0.00 0.00 4.30
1221 1859 0.467290 GAGCAGATCGTCCTCCCTCT 60.467 60.000 0.00 0.00 0.00 3.69
1222 1860 0.467290 AGCAGATCGTCCTCCCTCTC 60.467 60.000 0.00 0.00 0.00 3.20
1223 1861 1.460273 GCAGATCGTCCTCCCTCTCC 61.460 65.000 0.00 0.00 0.00 3.71
1224 1862 0.825840 CAGATCGTCCTCCCTCTCCC 60.826 65.000 0.00 0.00 0.00 4.30
1225 1863 0.996762 AGATCGTCCTCCCTCTCCCT 60.997 60.000 0.00 0.00 0.00 4.20
1292 1972 1.628238 TTGTCCGGCGGGTTCCATAT 61.628 55.000 27.98 0.00 33.83 1.78
1402 2102 6.791303 TGTTTCTTGCTCGATTTTACAGTTT 58.209 32.000 0.00 0.00 0.00 2.66
1403 2103 6.690957 TGTTTCTTGCTCGATTTTACAGTTTG 59.309 34.615 0.00 0.00 0.00 2.93
1404 2104 4.783242 TCTTGCTCGATTTTACAGTTTGC 58.217 39.130 0.00 0.00 0.00 3.68
1405 2105 3.181826 TGCTCGATTTTACAGTTTGCG 57.818 42.857 0.00 0.00 0.00 4.85
1406 2106 2.095969 TGCTCGATTTTACAGTTTGCGG 60.096 45.455 0.00 0.00 0.00 5.69
1409 2109 1.976045 CGATTTTACAGTTTGCGGTGC 59.024 47.619 0.00 0.00 0.00 5.01
1410 2110 2.350388 CGATTTTACAGTTTGCGGTGCT 60.350 45.455 0.00 0.00 0.00 4.40
1422 2140 2.027073 CGGTGCTAAACTGCGAGCA 61.027 57.895 0.00 0.00 46.24 4.26
1431 2149 3.730761 CTGCGAGCACCTTGTGGC 61.731 66.667 0.00 0.00 36.63 5.01
1480 2204 3.123621 GGCTTCAATAATCGCAGGTATCG 59.876 47.826 0.00 0.00 0.00 2.92
1579 2303 1.666011 GAGTCCACGCTTCACCTCA 59.334 57.895 0.00 0.00 0.00 3.86
1700 2424 3.374058 GTGTGCCGCAAGTATGTTCTATT 59.626 43.478 0.00 0.00 0.00 1.73
1701 2425 3.621268 TGTGCCGCAAGTATGTTCTATTC 59.379 43.478 0.00 0.00 0.00 1.75
1704 2428 3.877508 GCCGCAAGTATGTTCTATTCCTT 59.122 43.478 0.00 0.00 0.00 3.36
1713 2440 7.283329 AGTATGTTCTATTCCTTGGACCATTC 58.717 38.462 0.00 0.00 0.00 2.67
1735 2500 6.174720 TCCTTTCACTATACATGGATCACC 57.825 41.667 0.00 0.00 0.00 4.02
1878 2937 6.628919 TGAAAAGGGTTAAACTAGCTTGTC 57.371 37.500 0.07 0.00 0.00 3.18
1879 2938 5.533528 TGAAAAGGGTTAAACTAGCTTGTCC 59.466 40.000 0.07 0.00 0.00 4.02
1880 2939 3.715638 AGGGTTAAACTAGCTTGTCCC 57.284 47.619 12.91 12.91 0.00 4.46
1881 2940 2.983898 AGGGTTAAACTAGCTTGTCCCA 59.016 45.455 19.94 0.26 36.45 4.37
1882 2941 3.009143 AGGGTTAAACTAGCTTGTCCCAG 59.991 47.826 19.94 1.95 36.45 4.45
1883 2942 2.747989 GGTTAAACTAGCTTGTCCCAGC 59.252 50.000 0.07 0.00 40.44 4.85
1884 2943 2.747989 GTTAAACTAGCTTGTCCCAGCC 59.252 50.000 0.07 0.00 41.12 4.85
1885 2944 1.068121 AAACTAGCTTGTCCCAGCCT 58.932 50.000 0.07 0.00 41.12 4.58
1886 2945 1.068121 AACTAGCTTGTCCCAGCCTT 58.932 50.000 0.07 0.00 41.12 4.35
1887 2946 0.326264 ACTAGCTTGTCCCAGCCTTG 59.674 55.000 0.00 0.00 41.12 3.61
1888 2947 0.326264 CTAGCTTGTCCCAGCCTTGT 59.674 55.000 0.00 0.00 41.12 3.16
1889 2948 0.771127 TAGCTTGTCCCAGCCTTGTT 59.229 50.000 0.00 0.00 41.12 2.83
1890 2949 0.538287 AGCTTGTCCCAGCCTTGTTC 60.538 55.000 0.00 0.00 41.12 3.18
1891 2950 1.527433 GCTTGTCCCAGCCTTGTTCC 61.527 60.000 0.00 0.00 33.21 3.62
1892 2951 0.111253 CTTGTCCCAGCCTTGTTCCT 59.889 55.000 0.00 0.00 0.00 3.36
1893 2952 0.110486 TTGTCCCAGCCTTGTTCCTC 59.890 55.000 0.00 0.00 0.00 3.71
1894 2953 1.059584 TGTCCCAGCCTTGTTCCTCA 61.060 55.000 0.00 0.00 0.00 3.86
1895 2954 0.110486 GTCCCAGCCTTGTTCCTCAA 59.890 55.000 0.00 0.00 34.61 3.02
1896 2955 0.850100 TCCCAGCCTTGTTCCTCAAA 59.150 50.000 0.00 0.00 35.48 2.69
1897 2956 1.428912 TCCCAGCCTTGTTCCTCAAAT 59.571 47.619 0.00 0.00 35.48 2.32
1898 2957 1.547372 CCCAGCCTTGTTCCTCAAATG 59.453 52.381 0.00 0.00 35.48 2.32
1899 2958 1.547372 CCAGCCTTGTTCCTCAAATGG 59.453 52.381 0.00 0.00 35.48 3.16
1900 2959 2.517959 CAGCCTTGTTCCTCAAATGGA 58.482 47.619 0.00 0.00 35.48 3.41
1901 2960 3.094572 CAGCCTTGTTCCTCAAATGGAT 58.905 45.455 0.00 0.00 35.83 3.41
1902 2961 3.094572 AGCCTTGTTCCTCAAATGGATG 58.905 45.455 0.00 0.00 35.83 3.51
1903 2962 2.827921 GCCTTGTTCCTCAAATGGATGT 59.172 45.455 0.00 0.00 35.83 3.06
1904 2963 4.016444 GCCTTGTTCCTCAAATGGATGTA 58.984 43.478 0.00 0.00 35.83 2.29
1905 2964 4.646492 GCCTTGTTCCTCAAATGGATGTAT 59.354 41.667 0.00 0.00 35.83 2.29
1906 2965 5.221126 GCCTTGTTCCTCAAATGGATGTATC 60.221 44.000 0.00 0.00 35.83 2.24
1907 2966 6.125029 CCTTGTTCCTCAAATGGATGTATCT 58.875 40.000 0.00 0.00 35.83 1.98
1908 2967 7.282585 CCTTGTTCCTCAAATGGATGTATCTA 58.717 38.462 0.00 0.00 35.83 1.98
1909 2968 7.443575 CCTTGTTCCTCAAATGGATGTATCTAG 59.556 40.741 0.00 0.00 35.83 2.43
1910 2969 6.291377 TGTTCCTCAAATGGATGTATCTAGC 58.709 40.000 0.00 0.00 35.83 3.42
1911 2970 6.126796 TGTTCCTCAAATGGATGTATCTAGCA 60.127 38.462 0.00 0.00 35.83 3.49
1912 2971 5.858381 TCCTCAAATGGATGTATCTAGCAC 58.142 41.667 0.00 0.00 0.00 4.40
1913 2972 5.604231 TCCTCAAATGGATGTATCTAGCACT 59.396 40.000 0.00 0.00 0.00 4.40
1914 2973 6.782494 TCCTCAAATGGATGTATCTAGCACTA 59.218 38.462 0.00 0.00 0.00 2.74
1915 2974 7.290014 TCCTCAAATGGATGTATCTAGCACTAA 59.710 37.037 0.00 0.00 0.00 2.24
1916 2975 7.386299 CCTCAAATGGATGTATCTAGCACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
1917 2976 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
1918 2977 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
1919 2978 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
1920 2979 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
1921 2980 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
1922 2981 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
1934 2993 6.810911 CACTAACTTGGTGCTAGATACATCT 58.189 40.000 0.00 0.00 40.86 2.90
1935 2994 7.941919 CACTAACTTGGTGCTAGATACATCTA 58.058 38.462 0.00 0.00 38.32 1.98
1936 2995 8.580720 CACTAACTTGGTGCTAGATACATCTAT 58.419 37.037 0.00 0.00 38.60 1.98
1937 2996 9.148879 ACTAACTTGGTGCTAGATACATCTATT 57.851 33.333 0.00 0.00 38.60 1.73
1938 2997 9.988815 CTAACTTGGTGCTAGATACATCTATTT 57.011 33.333 0.00 0.00 38.60 1.40
1939 2998 8.668510 AACTTGGTGCTAGATACATCTATTTG 57.331 34.615 0.00 0.00 38.60 2.32
1940 2999 8.023021 ACTTGGTGCTAGATACATCTATTTGA 57.977 34.615 0.00 0.00 38.60 2.69
1941 3000 8.147058 ACTTGGTGCTAGATACATCTATTTGAG 58.853 37.037 0.00 0.00 38.60 3.02
1942 3001 6.997655 TGGTGCTAGATACATCTATTTGAGG 58.002 40.000 0.00 0.00 38.60 3.86
1943 3002 6.014242 TGGTGCTAGATACATCTATTTGAGGG 60.014 42.308 0.00 0.00 38.60 4.30
1944 3003 6.211584 GGTGCTAGATACATCTATTTGAGGGA 59.788 42.308 0.00 0.00 38.60 4.20
1945 3004 7.093992 GTGCTAGATACATCTATTTGAGGGAC 58.906 42.308 0.00 0.00 38.60 4.46
1946 3005 6.782494 TGCTAGATACATCTATTTGAGGGACA 59.218 38.462 0.00 0.00 38.60 4.02
1947 3006 7.290014 TGCTAGATACATCTATTTGAGGGACAA 59.710 37.037 0.00 0.00 38.60 3.18
1948 3007 7.816995 GCTAGATACATCTATTTGAGGGACAAG 59.183 40.741 0.00 0.00 38.60 3.16
1949 3008 6.529220 AGATACATCTATTTGAGGGACAAGC 58.471 40.000 0.00 0.00 36.19 4.01
1950 3009 4.851639 ACATCTATTTGAGGGACAAGCT 57.148 40.909 0.00 0.00 39.77 3.74
1951 3010 5.184892 ACATCTATTTGAGGGACAAGCTT 57.815 39.130 0.00 0.00 39.77 3.74
1952 3011 5.574188 ACATCTATTTGAGGGACAAGCTTT 58.426 37.500 0.00 0.00 39.77 3.51
1953 3012 6.012745 ACATCTATTTGAGGGACAAGCTTTT 58.987 36.000 0.00 0.00 39.77 2.27
1954 3013 6.151817 ACATCTATTTGAGGGACAAGCTTTTC 59.848 38.462 3.91 3.91 39.77 2.29
1955 3014 5.010282 TCTATTTGAGGGACAAGCTTTTCC 58.990 41.667 21.34 21.34 39.77 3.13
1956 3015 2.746279 TTGAGGGACAAGCTTTTCCA 57.254 45.000 28.35 9.63 33.01 3.53
1957 3016 2.276732 TGAGGGACAAGCTTTTCCAG 57.723 50.000 28.35 6.58 33.01 3.86
1958 3017 1.774254 TGAGGGACAAGCTTTTCCAGA 59.226 47.619 28.35 11.97 33.01 3.86
1959 3018 2.155279 GAGGGACAAGCTTTTCCAGAC 58.845 52.381 28.35 16.67 33.01 3.51
1960 3019 0.875059 GGGACAAGCTTTTCCAGACG 59.125 55.000 28.35 4.42 33.01 4.18
1961 3020 0.875059 GGACAAGCTTTTCCAGACGG 59.125 55.000 23.89 0.04 0.00 4.79
1962 3021 1.542547 GGACAAGCTTTTCCAGACGGA 60.543 52.381 23.89 0.00 40.60 4.69
1963 3022 1.801178 GACAAGCTTTTCCAGACGGAG 59.199 52.381 0.00 0.00 44.10 4.63
1966 3025 0.836400 AGCTTTTCCAGACGGAGGGA 60.836 55.000 0.00 0.00 44.10 4.20
1967 3026 0.391793 GCTTTTCCAGACGGAGGGAG 60.392 60.000 0.00 0.00 44.10 4.30
2256 3745 9.261180 GACCATTTCTTTCACGATTCATAGATA 57.739 33.333 0.00 0.00 0.00 1.98
2257 3746 9.784531 ACCATTTCTTTCACGATTCATAGATAT 57.215 29.630 0.00 0.00 0.00 1.63
2259 3748 9.539139 CATTTCTTTCACGATTCATAGATATGC 57.461 33.333 0.00 0.00 33.76 3.14
2260 3749 8.661352 TTTCTTTCACGATTCATAGATATGCA 57.339 30.769 0.00 0.00 33.76 3.96
2261 3750 7.880059 TCTTTCACGATTCATAGATATGCAG 57.120 36.000 0.00 0.00 33.76 4.41
2262 3751 7.436933 TCTTTCACGATTCATAGATATGCAGT 58.563 34.615 0.00 0.00 33.76 4.40
2263 3752 7.928167 TCTTTCACGATTCATAGATATGCAGTT 59.072 33.333 0.00 0.00 33.76 3.16
2264 3753 7.412137 TTCACGATTCATAGATATGCAGTTG 57.588 36.000 0.00 0.00 33.76 3.16
2265 3754 6.515832 TCACGATTCATAGATATGCAGTTGT 58.484 36.000 0.00 0.00 33.76 3.32
2266 3755 6.986231 TCACGATTCATAGATATGCAGTTGTT 59.014 34.615 0.00 0.00 33.76 2.83
2267 3756 7.495606 TCACGATTCATAGATATGCAGTTGTTT 59.504 33.333 0.00 0.00 33.76 2.83
2268 3757 8.764287 CACGATTCATAGATATGCAGTTGTTTA 58.236 33.333 0.00 0.00 33.76 2.01
2269 3758 8.765219 ACGATTCATAGATATGCAGTTGTTTAC 58.235 33.333 0.00 0.00 33.76 2.01
2270 3759 8.764287 CGATTCATAGATATGCAGTTGTTTACA 58.236 33.333 0.00 0.00 33.76 2.41
2273 3762 8.962884 TCATAGATATGCAGTTGTTTACATGT 57.037 30.769 2.69 2.69 33.76 3.21
2274 3763 9.394767 TCATAGATATGCAGTTGTTTACATGTT 57.605 29.630 2.30 0.00 33.76 2.71
2277 3766 7.885297 AGATATGCAGTTGTTTACATGTTTGT 58.115 30.769 2.30 0.00 39.98 2.83
2278 3767 9.008965 AGATATGCAGTTGTTTACATGTTTGTA 57.991 29.630 2.30 0.00 37.28 2.41
2279 3768 9.787532 GATATGCAGTTGTTTACATGTTTGTAT 57.212 29.630 2.30 0.32 38.12 2.29
2280 3769 9.787532 ATATGCAGTTGTTTACATGTTTGTATC 57.212 29.630 2.30 0.00 38.12 2.24
2281 3770 7.270757 TGCAGTTGTTTACATGTTTGTATCT 57.729 32.000 2.30 0.00 38.12 1.98
2282 3771 7.138081 TGCAGTTGTTTACATGTTTGTATCTG 58.862 34.615 2.30 8.31 38.12 2.90
2283 3772 6.582295 GCAGTTGTTTACATGTTTGTATCTGG 59.418 38.462 2.30 0.00 38.12 3.86
2284 3773 7.521423 GCAGTTGTTTACATGTTTGTATCTGGA 60.521 37.037 2.30 0.00 38.12 3.86
2285 3774 8.514594 CAGTTGTTTACATGTTTGTATCTGGAT 58.485 33.333 2.30 0.00 38.12 3.41
2286 3775 8.514594 AGTTGTTTACATGTTTGTATCTGGATG 58.485 33.333 2.30 0.00 38.12 3.51
2287 3776 7.994425 TGTTTACATGTTTGTATCTGGATGT 57.006 32.000 2.30 0.00 38.12 3.06
2288 3777 8.039603 TGTTTACATGTTTGTATCTGGATGTC 57.960 34.615 2.30 0.00 38.12 3.06
2289 3778 7.882791 TGTTTACATGTTTGTATCTGGATGTCT 59.117 33.333 2.30 0.00 38.12 3.41
2290 3779 9.378551 GTTTACATGTTTGTATCTGGATGTCTA 57.621 33.333 2.30 0.00 38.12 2.59
2292 3781 9.546428 TTACATGTTTGTATCTGGATGTCTATG 57.454 33.333 2.30 0.00 38.12 2.23
2293 3782 6.484643 ACATGTTTGTATCTGGATGTCTATGC 59.515 38.462 0.00 0.00 33.16 3.14
2294 3783 5.988287 TGTTTGTATCTGGATGTCTATGCA 58.012 37.500 0.00 0.00 33.32 3.96
2295 3784 6.594744 TGTTTGTATCTGGATGTCTATGCAT 58.405 36.000 3.79 3.79 33.95 3.96
2296 3785 6.484308 TGTTTGTATCTGGATGTCTATGCATG 59.516 38.462 10.16 0.00 33.95 4.06
2297 3786 6.423776 TTGTATCTGGATGTCTATGCATGA 57.576 37.500 10.16 1.87 33.95 3.07
2298 3787 6.616237 TGTATCTGGATGTCTATGCATGAT 57.384 37.500 10.16 2.54 33.95 2.45
2299 3788 7.722949 TGTATCTGGATGTCTATGCATGATA 57.277 36.000 10.16 3.83 33.95 2.15
2300 3789 7.779073 TGTATCTGGATGTCTATGCATGATAG 58.221 38.462 10.16 0.00 33.95 2.08
2324 3813 3.130340 ACTTTGTGAAATGCGGTGTTTCT 59.870 39.130 8.11 0.00 36.71 2.52
2325 3814 3.791973 TTGTGAAATGCGGTGTTTCTT 57.208 38.095 8.11 0.00 36.71 2.52
2326 3815 3.791973 TGTGAAATGCGGTGTTTCTTT 57.208 38.095 8.11 0.00 36.71 2.52
2327 3816 4.116747 TGTGAAATGCGGTGTTTCTTTT 57.883 36.364 8.11 0.00 36.71 2.27
2328 3817 3.862267 TGTGAAATGCGGTGTTTCTTTTG 59.138 39.130 8.11 0.00 36.71 2.44
2329 3818 3.862845 GTGAAATGCGGTGTTTCTTTTGT 59.137 39.130 8.11 0.00 36.71 2.83
2330 3819 3.862267 TGAAATGCGGTGTTTCTTTTGTG 59.138 39.130 8.11 0.00 36.71 3.33
2331 3820 2.507339 ATGCGGTGTTTCTTTTGTGG 57.493 45.000 0.00 0.00 0.00 4.17
2332 3821 1.178276 TGCGGTGTTTCTTTTGTGGT 58.822 45.000 0.00 0.00 0.00 4.16
2333 3822 1.133407 TGCGGTGTTTCTTTTGTGGTC 59.867 47.619 0.00 0.00 0.00 4.02
2334 3823 1.404035 GCGGTGTTTCTTTTGTGGTCT 59.596 47.619 0.00 0.00 0.00 3.85
2335 3824 2.794631 GCGGTGTTTCTTTTGTGGTCTG 60.795 50.000 0.00 0.00 0.00 3.51
2336 3825 2.422127 CGGTGTTTCTTTTGTGGTCTGT 59.578 45.455 0.00 0.00 0.00 3.41
2337 3826 3.119637 CGGTGTTTCTTTTGTGGTCTGTT 60.120 43.478 0.00 0.00 0.00 3.16
2338 3827 4.421058 GGTGTTTCTTTTGTGGTCTGTTC 58.579 43.478 0.00 0.00 0.00 3.18
2339 3828 4.095610 GTGTTTCTTTTGTGGTCTGTTCG 58.904 43.478 0.00 0.00 0.00 3.95
2340 3829 4.004314 TGTTTCTTTTGTGGTCTGTTCGA 58.996 39.130 0.00 0.00 0.00 3.71
2341 3830 4.638421 TGTTTCTTTTGTGGTCTGTTCGAT 59.362 37.500 0.00 0.00 0.00 3.59
2342 3831 4.811555 TTCTTTTGTGGTCTGTTCGATG 57.188 40.909 0.00 0.00 0.00 3.84
2343 3832 3.138304 TCTTTTGTGGTCTGTTCGATGG 58.862 45.455 0.00 0.00 0.00 3.51
2344 3833 1.890876 TTTGTGGTCTGTTCGATGGG 58.109 50.000 0.00 0.00 0.00 4.00
2345 3834 0.036164 TTGTGGTCTGTTCGATGGGG 59.964 55.000 0.00 0.00 0.00 4.96
2346 3835 0.834261 TGTGGTCTGTTCGATGGGGA 60.834 55.000 0.00 0.00 0.00 4.81
2347 3836 0.541863 GTGGTCTGTTCGATGGGGAT 59.458 55.000 0.00 0.00 0.00 3.85
2348 3837 0.541392 TGGTCTGTTCGATGGGGATG 59.459 55.000 0.00 0.00 0.00 3.51
2349 3838 0.179045 GGTCTGTTCGATGGGGATGG 60.179 60.000 0.00 0.00 0.00 3.51
2350 3839 0.830648 GTCTGTTCGATGGGGATGGA 59.169 55.000 0.00 0.00 0.00 3.41
2351 3840 1.417890 GTCTGTTCGATGGGGATGGAT 59.582 52.381 0.00 0.00 0.00 3.41
2369 3858 7.823310 GGGATGGATGCATATGTAGATCATATC 59.177 40.741 0.00 10.32 44.90 1.63
2373 3862 8.639761 TGGATGCATATGTAGATCATATCTCTG 58.360 37.037 0.00 0.00 44.90 3.35
2430 3921 9.931210 AATTAGCATACTTTTAATCAAGTACGC 57.069 29.630 9.15 9.15 44.91 4.42
2431 3922 6.359480 AGCATACTTTTAATCAAGTACGCC 57.641 37.500 12.24 2.03 45.42 5.68
2432 3923 5.296035 AGCATACTTTTAATCAAGTACGCCC 59.704 40.000 12.24 0.24 45.42 6.13
2433 3924 5.296035 GCATACTTTTAATCAAGTACGCCCT 59.704 40.000 6.79 0.00 40.82 5.19
2434 3925 6.511282 GCATACTTTTAATCAAGTACGCCCTC 60.511 42.308 6.79 0.00 40.82 4.30
2435 3926 4.259356 ACTTTTAATCAAGTACGCCCTCC 58.741 43.478 0.00 0.00 35.10 4.30
2436 3927 2.589798 TTAATCAAGTACGCCCTCCG 57.410 50.000 0.00 0.00 44.21 4.63
2445 3936 2.345991 CGCCCTCCGTCCAGAAAA 59.654 61.111 0.00 0.00 0.00 2.29
2446 3937 1.741770 CGCCCTCCGTCCAGAAAAG 60.742 63.158 0.00 0.00 0.00 2.27
2447 3938 2.041115 GCCCTCCGTCCAGAAAAGC 61.041 63.158 0.00 0.00 0.00 3.51
2448 3939 1.679898 CCCTCCGTCCAGAAAAGCT 59.320 57.895 0.00 0.00 0.00 3.74
2449 3940 0.036875 CCCTCCGTCCAGAAAAGCTT 59.963 55.000 0.00 0.00 0.00 3.74
2450 3941 1.160137 CCTCCGTCCAGAAAAGCTTG 58.840 55.000 0.00 0.00 0.00 4.01
2451 3942 1.543429 CCTCCGTCCAGAAAAGCTTGT 60.543 52.381 0.00 0.00 0.00 3.16
2452 3943 1.801178 CTCCGTCCAGAAAAGCTTGTC 59.199 52.381 8.73 8.73 0.00 3.18
2453 3944 0.875059 CCGTCCAGAAAAGCTTGTCC 59.125 55.000 13.25 0.00 0.00 4.02
2454 3945 0.875059 CGTCCAGAAAAGCTTGTCCC 59.125 55.000 13.25 0.00 0.00 4.46
2455 3946 1.543429 CGTCCAGAAAAGCTTGTCCCT 60.543 52.381 13.25 0.00 0.00 4.20
2456 3947 2.155279 GTCCAGAAAAGCTTGTCCCTC 58.845 52.381 13.25 0.00 0.00 4.30
2457 3948 1.774254 TCCAGAAAAGCTTGTCCCTCA 59.226 47.619 13.25 0.00 0.00 3.86
2458 3949 2.174639 TCCAGAAAAGCTTGTCCCTCAA 59.825 45.455 13.25 0.00 34.61 3.02
2459 3950 2.958355 CCAGAAAAGCTTGTCCCTCAAA 59.042 45.455 13.25 0.00 35.48 2.69
2460 3951 3.575687 CCAGAAAAGCTTGTCCCTCAAAT 59.424 43.478 13.25 0.00 35.48 2.32
2461 3952 4.553323 CAGAAAAGCTTGTCCCTCAAATG 58.447 43.478 13.25 0.00 35.48 2.32
2462 3953 3.575687 AGAAAAGCTTGTCCCTCAAATGG 59.424 43.478 13.25 0.00 35.48 3.16
2463 3954 1.260544 AAGCTTGTCCCTCAAATGGC 58.739 50.000 0.00 0.00 35.48 4.40
2464 3955 0.407139 AGCTTGTCCCTCAAATGGCT 59.593 50.000 0.00 0.00 35.48 4.75
2465 3956 0.813821 GCTTGTCCCTCAAATGGCTC 59.186 55.000 0.00 0.00 35.48 4.70
2466 3957 1.887956 GCTTGTCCCTCAAATGGCTCA 60.888 52.381 0.00 0.00 35.48 4.26
2467 3958 2.517959 CTTGTCCCTCAAATGGCTCAA 58.482 47.619 0.00 0.00 35.48 3.02
2468 3959 2.673775 TGTCCCTCAAATGGCTCAAA 57.326 45.000 0.00 0.00 0.00 2.69
2469 3960 3.173953 TGTCCCTCAAATGGCTCAAAT 57.826 42.857 0.00 0.00 0.00 2.32
2470 3961 2.827322 TGTCCCTCAAATGGCTCAAATG 59.173 45.455 0.00 0.00 0.00 2.32
2471 3962 2.167075 GTCCCTCAAATGGCTCAAATGG 59.833 50.000 0.00 0.00 0.00 3.16
2472 3963 2.042842 TCCCTCAAATGGCTCAAATGGA 59.957 45.455 0.00 0.00 0.00 3.41
2473 3964 3.036091 CCCTCAAATGGCTCAAATGGAT 58.964 45.455 0.00 0.00 0.00 3.41
2474 3965 3.181469 CCCTCAAATGGCTCAAATGGATG 60.181 47.826 0.00 0.00 0.00 3.51
2475 3966 3.449737 CCTCAAATGGCTCAAATGGATGT 59.550 43.478 0.00 0.00 0.00 3.06
2476 3967 4.646040 CCTCAAATGGCTCAAATGGATGTA 59.354 41.667 0.00 0.00 0.00 2.29
2477 3968 5.303589 CCTCAAATGGCTCAAATGGATGTAT 59.696 40.000 0.00 0.00 0.00 2.29
2478 3969 6.395426 TCAAATGGCTCAAATGGATGTATC 57.605 37.500 0.00 0.00 0.00 2.24
2479 3970 6.131264 TCAAATGGCTCAAATGGATGTATCT 58.869 36.000 0.00 0.00 0.00 1.98
2480 3971 7.289310 TCAAATGGCTCAAATGGATGTATCTA 58.711 34.615 0.00 0.00 0.00 1.98
2481 3972 7.446319 TCAAATGGCTCAAATGGATGTATCTAG 59.554 37.037 0.00 0.00 0.00 2.43
2482 3973 4.645535 TGGCTCAAATGGATGTATCTAGC 58.354 43.478 0.00 0.00 0.00 3.42
2483 3974 4.102996 TGGCTCAAATGGATGTATCTAGCA 59.897 41.667 0.00 0.00 0.00 3.49
2484 3975 4.453819 GGCTCAAATGGATGTATCTAGCAC 59.546 45.833 0.00 0.00 0.00 4.40
2485 3976 5.303971 GCTCAAATGGATGTATCTAGCACT 58.696 41.667 0.00 0.00 0.00 4.40
2486 3977 6.459066 GCTCAAATGGATGTATCTAGCACTA 58.541 40.000 0.00 0.00 0.00 2.74
2487 3978 6.931281 GCTCAAATGGATGTATCTAGCACTAA 59.069 38.462 0.00 0.00 0.00 2.24
2488 3979 7.095439 GCTCAAATGGATGTATCTAGCACTAAC 60.095 40.741 0.00 0.00 0.00 2.34
2489 3980 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
2490 3981 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
2491 3982 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
2492 3983 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
2493 3984 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
2494 3985 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
2506 3997 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
2507 3998 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
2508 3999 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
2509 4000 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
2510 4001 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
2511 4002 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
2512 4003 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
2513 4004 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
2514 4005 4.999950 GGTGCTAGATACATCCATTTGAGG 59.000 45.833 0.00 0.00 0.00 3.86
2515 4006 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
2516 4007 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
2517 4008 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
2518 4009 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
2519 4010 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
2529 4020 4.379339 TTTGAGGGACAAACTTTTTCGG 57.621 40.909 0.00 0.00 42.57 4.30
2530 4021 3.284793 TGAGGGACAAACTTTTTCGGA 57.715 42.857 0.00 0.00 0.00 4.55
2531 4022 2.946990 TGAGGGACAAACTTTTTCGGAC 59.053 45.455 0.00 0.00 0.00 4.79
2532 4023 1.944709 AGGGACAAACTTTTTCGGACG 59.055 47.619 0.00 0.00 0.00 4.79
2533 4024 1.002142 GGGACAAACTTTTTCGGACGG 60.002 52.381 0.00 0.00 0.00 4.79
2534 4025 1.941975 GGACAAACTTTTTCGGACGGA 59.058 47.619 0.00 0.00 0.00 4.69
2535 4026 2.032290 GGACAAACTTTTTCGGACGGAG 60.032 50.000 0.00 0.00 0.00 4.63
2536 4027 1.944709 ACAAACTTTTTCGGACGGAGG 59.055 47.619 0.00 0.00 0.00 4.30
2537 4028 1.265905 CAAACTTTTTCGGACGGAGGG 59.734 52.381 0.00 0.00 0.00 4.30
2538 4029 0.760572 AACTTTTTCGGACGGAGGGA 59.239 50.000 0.00 0.00 0.00 4.20
2539 4030 0.320697 ACTTTTTCGGACGGAGGGAG 59.679 55.000 0.00 0.00 0.00 4.30
2540 4031 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
2541 4032 0.034337 TTTTTCGGACGGAGGGAGTG 59.966 55.000 0.00 0.00 0.00 3.51
2672 4163 5.875224 TCTCTGTGTGGTTAATTTGGATCA 58.125 37.500 0.00 0.00 0.00 2.92
2696 4187 6.996180 AGGAACTAGCTTATTGGCATACTA 57.004 37.500 0.00 0.00 36.02 1.82
2732 4242 6.590292 AGATGGTGTATTTCTTTCACTACACG 59.410 38.462 0.00 0.00 43.00 4.49
3511 6691 5.588240 TGCTCTTGCATGAATGATGAAATC 58.412 37.500 0.00 0.00 45.31 2.17
3666 6859 3.099141 CCTACTTGGGAATTGCATGGTT 58.901 45.455 0.00 0.00 0.00 3.67
3667 6860 3.515104 CCTACTTGGGAATTGCATGGTTT 59.485 43.478 0.00 0.00 0.00 3.27
3668 6861 3.683365 ACTTGGGAATTGCATGGTTTC 57.317 42.857 0.00 0.00 0.00 2.78
3669 6862 2.029110 ACTTGGGAATTGCATGGTTTCG 60.029 45.455 0.00 0.00 0.00 3.46
3670 6863 1.626686 TGGGAATTGCATGGTTTCGT 58.373 45.000 0.00 0.00 0.00 3.85
3671 6864 1.271934 TGGGAATTGCATGGTTTCGTG 59.728 47.619 0.00 0.00 0.00 4.35
3686 6879 2.702898 TCGTGTTCGTCGTCCAAATA 57.297 45.000 0.00 0.00 38.33 1.40
3751 6947 5.049405 GTGTAGCATGAGCACTGTTAAAACT 60.049 40.000 0.00 0.00 45.49 2.66
3752 6948 4.756084 AGCATGAGCACTGTTAAAACTC 57.244 40.909 0.00 0.00 45.49 3.01
3753 6949 4.392940 AGCATGAGCACTGTTAAAACTCT 58.607 39.130 0.00 0.00 45.49 3.24
3754 6950 4.214971 AGCATGAGCACTGTTAAAACTCTG 59.785 41.667 0.00 0.00 45.49 3.35
3755 6951 4.214119 GCATGAGCACTGTTAAAACTCTGA 59.786 41.667 0.00 0.00 41.58 3.27
3756 6952 5.277974 GCATGAGCACTGTTAAAACTCTGAA 60.278 40.000 0.00 0.00 41.58 3.02
3757 6953 5.991328 TGAGCACTGTTAAAACTCTGAAG 57.009 39.130 0.00 0.00 0.00 3.02
3758 6954 5.428253 TGAGCACTGTTAAAACTCTGAAGT 58.572 37.500 0.00 0.00 37.32 3.01
3759 6955 6.578944 TGAGCACTGTTAAAACTCTGAAGTA 58.421 36.000 0.00 0.00 33.48 2.24
3760 6956 6.479001 TGAGCACTGTTAAAACTCTGAAGTAC 59.521 38.462 0.00 0.00 33.48 2.73
3761 6957 6.346096 AGCACTGTTAAAACTCTGAAGTACA 58.654 36.000 0.00 0.00 33.48 2.90
3762 6958 6.821665 AGCACTGTTAAAACTCTGAAGTACAA 59.178 34.615 0.00 0.00 33.48 2.41
3763 6959 7.335924 AGCACTGTTAAAACTCTGAAGTACAAA 59.664 33.333 0.00 0.00 33.48 2.83
3764 6960 8.129211 GCACTGTTAAAACTCTGAAGTACAAAT 58.871 33.333 0.00 0.00 33.48 2.32
3773 6969 8.974060 AACTCTGAAGTACAAATTTGTTAGGA 57.026 30.769 27.66 15.61 42.35 2.94
3774 6970 8.974060 ACTCTGAAGTACAAATTTGTTAGGAA 57.026 30.769 27.66 7.86 42.35 3.36
3775 6971 9.403583 ACTCTGAAGTACAAATTTGTTAGGAAA 57.596 29.630 27.66 7.12 42.35 3.13
3776 6972 9.665264 CTCTGAAGTACAAATTTGTTAGGAAAC 57.335 33.333 27.66 18.14 42.35 2.78
3777 6973 8.626526 TCTGAAGTACAAATTTGTTAGGAAACC 58.373 33.333 27.66 8.56 42.35 3.27
3778 6974 8.294954 TGAAGTACAAATTTGTTAGGAAACCA 57.705 30.769 27.66 10.74 42.35 3.67
3779 6975 8.750298 TGAAGTACAAATTTGTTAGGAAACCAA 58.250 29.630 27.66 4.15 42.35 3.67
3780 6976 9.589111 GAAGTACAAATTTGTTAGGAAACCAAA 57.411 29.630 27.66 3.63 42.35 3.28
3782 6978 9.541143 AGTACAAATTTGTTAGGAAACCAAATG 57.459 29.630 27.66 0.00 42.35 2.32
3783 6979 7.258022 ACAAATTTGTTAGGAAACCAAATGC 57.742 32.000 18.13 0.00 38.47 3.56
3784 6980 6.262049 ACAAATTTGTTAGGAAACCAAATGCC 59.738 34.615 18.13 0.00 38.47 4.40
3785 6981 5.559148 ATTTGTTAGGAAACCAAATGCCA 57.441 34.783 0.00 0.00 34.49 4.92
3786 6982 4.329462 TTGTTAGGAAACCAAATGCCAC 57.671 40.909 0.00 0.00 34.49 5.01
3787 6983 2.630580 TGTTAGGAAACCAAATGCCACC 59.369 45.455 0.00 0.00 34.49 4.61
3788 6984 2.897326 GTTAGGAAACCAAATGCCACCT 59.103 45.455 0.00 0.00 0.00 4.00
3789 6985 1.341080 AGGAAACCAAATGCCACCTG 58.659 50.000 0.00 0.00 0.00 4.00
3790 6986 1.133199 AGGAAACCAAATGCCACCTGA 60.133 47.619 0.00 0.00 0.00 3.86
3791 6987 1.000843 GGAAACCAAATGCCACCTGAC 59.999 52.381 0.00 0.00 0.00 3.51
3792 6988 0.673437 AAACCAAATGCCACCTGACG 59.327 50.000 0.00 0.00 0.00 4.35
3793 6989 0.179004 AACCAAATGCCACCTGACGA 60.179 50.000 0.00 0.00 0.00 4.20
3794 6990 0.606401 ACCAAATGCCACCTGACGAG 60.606 55.000 0.00 0.00 0.00 4.18
3795 6991 1.503542 CAAATGCCACCTGACGAGC 59.496 57.895 0.00 0.00 0.00 5.03
3796 6992 1.073025 AAATGCCACCTGACGAGCA 59.927 52.632 0.00 0.00 40.00 4.26
3797 6993 1.237285 AAATGCCACCTGACGAGCAC 61.237 55.000 0.00 0.00 38.21 4.40
3798 6994 2.116983 AATGCCACCTGACGAGCACT 62.117 55.000 0.00 0.00 38.21 4.40
3799 6995 2.740055 GCCACCTGACGAGCACTG 60.740 66.667 0.00 0.00 0.00 3.66
3800 6996 2.737180 CCACCTGACGAGCACTGT 59.263 61.111 0.00 0.00 0.00 3.55
3801 6997 1.373497 CCACCTGACGAGCACTGTC 60.373 63.158 0.00 0.00 36.88 3.51
3802 6998 1.363807 CACCTGACGAGCACTGTCA 59.636 57.895 5.71 5.71 43.68 3.58
3803 6999 0.249447 CACCTGACGAGCACTGTCAA 60.249 55.000 7.05 0.00 45.05 3.18
3804 7000 0.464036 ACCTGACGAGCACTGTCAAA 59.536 50.000 7.05 0.00 45.05 2.69
3805 7001 1.134521 ACCTGACGAGCACTGTCAAAA 60.135 47.619 7.05 0.00 45.05 2.44
3806 7002 1.261619 CCTGACGAGCACTGTCAAAAC 59.738 52.381 7.05 0.00 45.05 2.43
3833 7032 9.179909 TCTGAAGTACAAATTTGTTAGGAAACA 57.820 29.630 27.66 16.59 43.85 2.83
4005 7275 2.032549 GGTGCTATTCATAGTTGCAGCG 60.033 50.000 0.00 0.00 41.15 5.18
4071 7397 7.573843 GCAGAGTTACAAGACATACAAAGCATT 60.574 37.037 0.00 0.00 0.00 3.56
4299 7644 3.704061 AGTAGAGGTTGGAGAATCTGAGC 59.296 47.826 0.00 0.00 33.73 4.26
4308 7653 1.000731 GAGAATCTGAGCGATCAGGGG 59.999 57.143 28.81 6.45 38.23 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.553706 ATTCAGGCCCAAGCTCAAAG 58.446 50.000 0.00 0.00 39.73 2.77
7 8 1.259609 CAATTCAGGCCCAAGCTCAA 58.740 50.000 0.00 0.00 39.73 3.02
8 9 1.252904 GCAATTCAGGCCCAAGCTCA 61.253 55.000 0.00 0.00 39.73 4.26
18 19 2.416547 ACATTTCGAGACGCAATTCAGG 59.583 45.455 0.00 0.00 0.00 3.86
32 33 9.358123 CAAAGATTATAGCGTTTCTACATTTCG 57.642 33.333 0.00 0.00 0.00 3.46
62 63 9.888878 AAACATCAAGATCGCATAATTTCTATG 57.111 29.630 0.00 0.00 0.00 2.23
75 76 5.989249 TCAGTTTCACAAACATCAAGATCG 58.011 37.500 2.16 0.00 43.79 3.69
130 133 1.751351 GCCTCTGGGTCCTTTATTTGC 59.249 52.381 0.00 0.00 34.45 3.68
142 145 1.338020 GTCAACAACTTTGCCTCTGGG 59.662 52.381 0.00 0.00 0.00 4.45
163 166 2.051423 GCAAACCGCTTTGTTCTTAGC 58.949 47.619 5.17 0.00 39.30 3.09
228 232 8.969267 CGAAAGCGAAATATATCACTAAGTTCT 58.031 33.333 0.00 0.00 40.82 3.01
233 251 9.608617 CTAGACGAAAGCGAAATATATCACTAA 57.391 33.333 0.00 0.00 41.64 2.24
404 620 9.490663 CCTAAGATTTAAGTATTTTTGTCGCAG 57.509 33.333 0.00 0.00 0.00 5.18
488 704 3.766591 AGTGTCAATCTGAACCTCTCGAT 59.233 43.478 0.00 0.00 0.00 3.59
513 729 6.235664 ACTAATATGAACGGTCAAACCTTGT 58.764 36.000 7.51 0.00 37.30 3.16
560 859 6.022163 ACGATTAATATCCGGTAACTCCAG 57.978 41.667 0.00 0.00 35.57 3.86
621 943 4.935702 CATTTATGCATTCCGAACATGGT 58.064 39.130 3.54 0.00 0.00 3.55
650 972 6.127730 ACTCGTCCAACTCTTGTGAAAATTTT 60.128 34.615 2.28 2.28 0.00 1.82
651 973 5.357032 ACTCGTCCAACTCTTGTGAAAATTT 59.643 36.000 0.00 0.00 0.00 1.82
657 979 3.194861 CAAACTCGTCCAACTCTTGTGA 58.805 45.455 0.00 0.00 0.00 3.58
708 1030 8.054572 TCCAAACCAAATGATCTGATTCATCTA 58.945 33.333 0.00 0.00 35.29 1.98
738 1116 1.864263 AAGGCCCAAGGTCTAAGCCC 61.864 60.000 0.00 0.00 45.00 5.19
1063 1498 2.029073 CTTGACGCTGTGGACGGT 59.971 61.111 0.00 0.00 34.00 4.83
1069 1504 0.957395 ATCTTGGCCTTGACGCTGTG 60.957 55.000 3.32 0.00 0.00 3.66
1153 1596 5.767816 ACAAAGAAGTAACACAACCATCC 57.232 39.130 0.00 0.00 0.00 3.51
1156 1599 4.936411 TCGAACAAAGAAGTAACACAACCA 59.064 37.500 0.00 0.00 0.00 3.67
1166 1609 5.655488 AGATCATCGATCGAACAAAGAAGT 58.345 37.500 23.50 0.00 43.17 3.01
1220 1858 2.417719 CAAGAAAAGGTCGTCAGGGAG 58.582 52.381 0.00 0.00 0.00 4.30
1221 1859 1.071699 CCAAGAAAAGGTCGTCAGGGA 59.928 52.381 0.00 0.00 0.00 4.20
1222 1860 1.523758 CCAAGAAAAGGTCGTCAGGG 58.476 55.000 0.00 0.00 0.00 4.45
1223 1861 1.202770 ACCCAAGAAAAGGTCGTCAGG 60.203 52.381 0.00 0.00 0.00 3.86
1224 1862 2.256117 ACCCAAGAAAAGGTCGTCAG 57.744 50.000 0.00 0.00 0.00 3.51
1225 1863 2.721425 AACCCAAGAAAAGGTCGTCA 57.279 45.000 0.00 0.00 34.45 4.35
1402 2102 2.027073 CTCGCAGTTTAGCACCGCA 61.027 57.895 0.00 0.00 0.00 5.69
1403 2103 2.778679 CTCGCAGTTTAGCACCGC 59.221 61.111 0.00 0.00 0.00 5.68
1404 2104 2.027073 TGCTCGCAGTTTAGCACCG 61.027 57.895 0.00 0.00 43.56 4.94
1405 2105 3.966215 TGCTCGCAGTTTAGCACC 58.034 55.556 0.00 0.00 43.56 5.01
1409 2109 1.195448 CACAAGGTGCTCGCAGTTTAG 59.805 52.381 0.00 0.00 0.00 1.85
1410 2110 1.225855 CACAAGGTGCTCGCAGTTTA 58.774 50.000 0.00 0.00 0.00 2.01
1422 2140 0.323629 TTAGCTTAGCGCCACAAGGT 59.676 50.000 18.67 18.67 40.39 3.50
1456 2178 2.292267 ACCTGCGATTATTGAAGCCAG 58.708 47.619 0.00 0.00 0.00 4.85
1713 2440 5.928976 TGGTGATCCATGTATAGTGAAAGG 58.071 41.667 0.00 0.00 39.03 3.11
1735 2500 7.971722 TCAATTCACAAGCTTGTATCATTCATG 59.028 33.333 30.67 19.49 39.91 3.07
1861 2653 3.344515 CTGGGACAAGCTAGTTTAACCC 58.655 50.000 19.07 19.07 38.70 4.11
1878 2937 1.547372 CATTTGAGGAACAAGGCTGGG 59.453 52.381 0.00 0.00 39.77 4.45
1879 2938 1.547372 CCATTTGAGGAACAAGGCTGG 59.453 52.381 0.00 0.00 39.77 4.85
1880 2939 2.517959 TCCATTTGAGGAACAAGGCTG 58.482 47.619 0.00 0.00 39.77 4.85
1881 2940 2.978156 TCCATTTGAGGAACAAGGCT 57.022 45.000 0.00 0.00 39.77 4.58
1882 2941 2.827921 ACATCCATTTGAGGAACAAGGC 59.172 45.455 0.00 0.00 41.92 4.35
1883 2942 6.125029 AGATACATCCATTTGAGGAACAAGG 58.875 40.000 0.00 0.00 41.92 3.61
1884 2943 7.041508 GCTAGATACATCCATTTGAGGAACAAG 60.042 40.741 0.00 0.00 41.92 3.16
1885 2944 6.767902 GCTAGATACATCCATTTGAGGAACAA 59.232 38.462 0.00 0.00 41.92 2.83
1886 2945 6.126796 TGCTAGATACATCCATTTGAGGAACA 60.127 38.462 0.00 0.00 41.92 3.18
1887 2946 6.203723 GTGCTAGATACATCCATTTGAGGAAC 59.796 42.308 0.00 0.00 41.92 3.62
1888 2947 6.100279 AGTGCTAGATACATCCATTTGAGGAA 59.900 38.462 0.00 0.00 41.92 3.36
1889 2948 5.604231 AGTGCTAGATACATCCATTTGAGGA 59.396 40.000 0.00 0.00 43.01 3.71
1890 2949 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
1891 2950 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
1892 2951 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
1893 2952 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
1894 2953 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
1895 2954 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
1896 2955 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
1897 2956 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
1898 2957 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
1910 2969 6.810911 AGATGTATCTAGCACCAAGTTAGTG 58.189 40.000 0.00 0.00 34.85 2.74
1911 2970 8.713708 ATAGATGTATCTAGCACCAAGTTAGT 57.286 34.615 7.57 0.00 42.20 2.24
1912 2971 9.988815 AAATAGATGTATCTAGCACCAAGTTAG 57.011 33.333 7.57 0.00 42.20 2.34
1913 2972 9.764363 CAAATAGATGTATCTAGCACCAAGTTA 57.236 33.333 7.57 0.00 42.20 2.24
1914 2973 8.486210 TCAAATAGATGTATCTAGCACCAAGTT 58.514 33.333 7.57 0.00 42.20 2.66
1915 2974 8.023021 TCAAATAGATGTATCTAGCACCAAGT 57.977 34.615 7.57 0.00 42.20 3.16
1916 2975 7.601886 CCTCAAATAGATGTATCTAGCACCAAG 59.398 40.741 7.57 1.72 42.20 3.61
1917 2976 7.445121 CCTCAAATAGATGTATCTAGCACCAA 58.555 38.462 7.57 0.00 42.20 3.67
1918 2977 6.014242 CCCTCAAATAGATGTATCTAGCACCA 60.014 42.308 7.57 0.00 42.20 4.17
1919 2978 6.211584 TCCCTCAAATAGATGTATCTAGCACC 59.788 42.308 7.57 0.00 42.20 5.01
1920 2979 7.093992 GTCCCTCAAATAGATGTATCTAGCAC 58.906 42.308 7.57 0.00 42.20 4.40
1921 2980 6.782494 TGTCCCTCAAATAGATGTATCTAGCA 59.218 38.462 7.57 0.00 42.20 3.49
1922 2981 7.233389 TGTCCCTCAAATAGATGTATCTAGC 57.767 40.000 7.57 0.00 42.20 3.42
1923 2982 7.816995 GCTTGTCCCTCAAATAGATGTATCTAG 59.183 40.741 7.57 0.00 36.19 2.43
1924 2983 7.510685 AGCTTGTCCCTCAAATAGATGTATCTA 59.489 37.037 4.22 4.22 36.64 1.98
1925 2984 6.328672 AGCTTGTCCCTCAAATAGATGTATCT 59.671 38.462 0.00 0.00 36.97 1.98
1926 2985 6.529220 AGCTTGTCCCTCAAATAGATGTATC 58.471 40.000 0.00 0.00 35.48 2.24
1927 2986 6.506538 AGCTTGTCCCTCAAATAGATGTAT 57.493 37.500 0.00 0.00 35.48 2.29
1928 2987 5.957771 AGCTTGTCCCTCAAATAGATGTA 57.042 39.130 0.00 0.00 35.48 2.29
1929 2988 4.851639 AGCTTGTCCCTCAAATAGATGT 57.148 40.909 0.00 0.00 35.48 3.06
1930 2989 6.405176 GGAAAAGCTTGTCCCTCAAATAGATG 60.405 42.308 23.49 0.00 35.48 2.90
1931 2990 5.654209 GGAAAAGCTTGTCCCTCAAATAGAT 59.346 40.000 23.49 0.00 35.48 1.98
1932 2991 5.010282 GGAAAAGCTTGTCCCTCAAATAGA 58.990 41.667 23.49 0.00 35.48 1.98
1933 2992 4.766891 TGGAAAAGCTTGTCCCTCAAATAG 59.233 41.667 29.33 0.00 35.48 1.73
1934 2993 4.735369 TGGAAAAGCTTGTCCCTCAAATA 58.265 39.130 29.33 9.17 35.48 1.40
1935 2994 3.575687 CTGGAAAAGCTTGTCCCTCAAAT 59.424 43.478 29.33 0.00 35.48 2.32
1936 2995 2.958355 CTGGAAAAGCTTGTCCCTCAAA 59.042 45.455 29.33 12.14 35.48 2.69
1937 2996 2.174639 TCTGGAAAAGCTTGTCCCTCAA 59.825 45.455 29.33 12.50 32.48 3.02
1938 2997 1.774254 TCTGGAAAAGCTTGTCCCTCA 59.226 47.619 29.33 12.84 32.48 3.86
1939 2998 2.155279 GTCTGGAAAAGCTTGTCCCTC 58.845 52.381 29.33 16.91 32.48 4.30
1940 2999 1.543429 CGTCTGGAAAAGCTTGTCCCT 60.543 52.381 29.33 0.00 32.48 4.20
1941 3000 0.875059 CGTCTGGAAAAGCTTGTCCC 59.125 55.000 29.33 15.25 32.48 4.46
1942 3001 0.875059 CCGTCTGGAAAAGCTTGTCC 59.125 55.000 26.56 26.56 37.49 4.02
1943 3002 1.801178 CTCCGTCTGGAAAAGCTTGTC 59.199 52.381 8.23 8.23 45.87 3.18
1944 3003 1.543429 CCTCCGTCTGGAAAAGCTTGT 60.543 52.381 0.00 0.00 45.87 3.16
1945 3004 1.160137 CCTCCGTCTGGAAAAGCTTG 58.840 55.000 0.00 0.00 45.87 4.01
1946 3005 0.036875 CCCTCCGTCTGGAAAAGCTT 59.963 55.000 0.00 0.00 45.87 3.74
1947 3006 0.836400 TCCCTCCGTCTGGAAAAGCT 60.836 55.000 0.00 0.00 45.87 3.74
1948 3007 0.391793 CTCCCTCCGTCTGGAAAAGC 60.392 60.000 0.00 0.00 45.87 3.51
1949 3008 0.977395 ACTCCCTCCGTCTGGAAAAG 59.023 55.000 0.00 0.00 45.87 2.27
1950 3009 1.897802 GTACTCCCTCCGTCTGGAAAA 59.102 52.381 0.00 0.00 45.87 2.29
1951 3010 1.076677 AGTACTCCCTCCGTCTGGAAA 59.923 52.381 0.00 0.00 45.87 3.13
1952 3011 0.702902 AGTACTCCCTCCGTCTGGAA 59.297 55.000 0.00 0.00 45.87 3.53
1953 3012 0.702902 AAGTACTCCCTCCGTCTGGA 59.297 55.000 0.00 0.00 43.88 3.86
1954 3013 1.104630 GAAGTACTCCCTCCGTCTGG 58.895 60.000 0.00 0.00 0.00 3.86
1955 3014 2.131776 AGAAGTACTCCCTCCGTCTG 57.868 55.000 0.00 0.00 0.00 3.51
1956 3015 2.903375 AAGAAGTACTCCCTCCGTCT 57.097 50.000 0.00 0.00 0.00 4.18
1957 3016 4.205587 TGATAAGAAGTACTCCCTCCGTC 58.794 47.826 0.00 0.00 0.00 4.79
1958 3017 4.246712 TGATAAGAAGTACTCCCTCCGT 57.753 45.455 0.00 0.00 0.00 4.69
1959 3018 4.645588 ACTTGATAAGAAGTACTCCCTCCG 59.354 45.833 0.00 0.00 34.29 4.63
2256 3745 7.809331 CAGATACAAACATGTAAACAACTGCAT 59.191 33.333 0.00 0.00 0.00 3.96
2257 3746 7.138081 CAGATACAAACATGTAAACAACTGCA 58.862 34.615 0.00 0.00 0.00 4.41
2258 3747 6.582295 CCAGATACAAACATGTAAACAACTGC 59.418 38.462 0.00 0.00 0.00 4.40
2259 3748 7.870826 TCCAGATACAAACATGTAAACAACTG 58.129 34.615 0.00 5.95 0.00 3.16
2260 3749 8.514594 CATCCAGATACAAACATGTAAACAACT 58.485 33.333 0.00 0.00 0.00 3.16
2261 3750 8.296713 ACATCCAGATACAAACATGTAAACAAC 58.703 33.333 0.00 0.00 0.00 3.32
2262 3751 8.402798 ACATCCAGATACAAACATGTAAACAA 57.597 30.769 0.00 0.00 0.00 2.83
2263 3752 7.882791 AGACATCCAGATACAAACATGTAAACA 59.117 33.333 0.00 0.00 0.00 2.83
2264 3753 8.268850 AGACATCCAGATACAAACATGTAAAC 57.731 34.615 0.00 0.00 0.00 2.01
2266 3755 9.546428 CATAGACATCCAGATACAAACATGTAA 57.454 33.333 0.00 0.00 0.00 2.41
2267 3756 7.657354 GCATAGACATCCAGATACAAACATGTA 59.343 37.037 0.00 0.00 0.00 2.29
2268 3757 6.484643 GCATAGACATCCAGATACAAACATGT 59.515 38.462 0.00 0.00 0.00 3.21
2269 3758 6.484308 TGCATAGACATCCAGATACAAACATG 59.516 38.462 0.00 0.00 0.00 3.21
2270 3759 6.594744 TGCATAGACATCCAGATACAAACAT 58.405 36.000 0.00 0.00 0.00 2.71
2271 3760 5.988287 TGCATAGACATCCAGATACAAACA 58.012 37.500 0.00 0.00 0.00 2.83
2272 3761 6.707608 TCATGCATAGACATCCAGATACAAAC 59.292 38.462 0.00 0.00 0.00 2.93
2273 3762 6.829849 TCATGCATAGACATCCAGATACAAA 58.170 36.000 0.00 0.00 0.00 2.83
2274 3763 6.423776 TCATGCATAGACATCCAGATACAA 57.576 37.500 0.00 0.00 0.00 2.41
2275 3764 6.616237 ATCATGCATAGACATCCAGATACA 57.384 37.500 0.00 0.00 0.00 2.29
2276 3765 8.005192 TCTATCATGCATAGACATCCAGATAC 57.995 38.462 0.00 0.00 38.94 2.24
2277 3766 8.473219 GTTCTATCATGCATAGACATCCAGATA 58.527 37.037 0.00 0.00 42.85 1.98
2278 3767 7.180587 AGTTCTATCATGCATAGACATCCAGAT 59.819 37.037 0.00 0.00 42.85 2.90
2279 3768 6.496218 AGTTCTATCATGCATAGACATCCAGA 59.504 38.462 0.00 0.00 42.85 3.86
2280 3769 6.699366 AGTTCTATCATGCATAGACATCCAG 58.301 40.000 0.00 0.00 42.85 3.86
2281 3770 6.676990 AGTTCTATCATGCATAGACATCCA 57.323 37.500 0.00 0.00 42.85 3.41
2282 3771 7.443575 ACAAAGTTCTATCATGCATAGACATCC 59.556 37.037 0.00 0.00 42.85 3.51
2283 3772 8.281194 CACAAAGTTCTATCATGCATAGACATC 58.719 37.037 0.00 7.87 42.85 3.06
2284 3773 7.989170 TCACAAAGTTCTATCATGCATAGACAT 59.011 33.333 0.00 0.00 42.85 3.06
2285 3774 7.330262 TCACAAAGTTCTATCATGCATAGACA 58.670 34.615 0.00 0.00 42.85 3.41
2286 3775 7.776933 TCACAAAGTTCTATCATGCATAGAC 57.223 36.000 0.00 8.93 42.85 2.59
2287 3776 8.791327 TTTCACAAAGTTCTATCATGCATAGA 57.209 30.769 0.00 0.00 41.66 1.98
2288 3777 9.447040 CATTTCACAAAGTTCTATCATGCATAG 57.553 33.333 0.00 0.00 36.50 2.23
2289 3778 7.916977 GCATTTCACAAAGTTCTATCATGCATA 59.083 33.333 0.00 0.00 34.68 3.14
2290 3779 6.755141 GCATTTCACAAAGTTCTATCATGCAT 59.245 34.615 0.00 0.00 34.68 3.96
2291 3780 6.094719 GCATTTCACAAAGTTCTATCATGCA 58.905 36.000 0.00 0.00 34.68 3.96
2292 3781 5.228635 CGCATTTCACAAAGTTCTATCATGC 59.771 40.000 0.00 0.00 0.00 4.06
2293 3782 5.740569 CCGCATTTCACAAAGTTCTATCATG 59.259 40.000 0.00 0.00 0.00 3.07
2294 3783 5.415701 ACCGCATTTCACAAAGTTCTATCAT 59.584 36.000 0.00 0.00 0.00 2.45
2295 3784 4.759693 ACCGCATTTCACAAAGTTCTATCA 59.240 37.500 0.00 0.00 0.00 2.15
2296 3785 5.088739 CACCGCATTTCACAAAGTTCTATC 58.911 41.667 0.00 0.00 0.00 2.08
2297 3786 4.518970 ACACCGCATTTCACAAAGTTCTAT 59.481 37.500 0.00 0.00 0.00 1.98
2298 3787 3.880490 ACACCGCATTTCACAAAGTTCTA 59.120 39.130 0.00 0.00 0.00 2.10
2299 3788 2.687935 ACACCGCATTTCACAAAGTTCT 59.312 40.909 0.00 0.00 0.00 3.01
2300 3789 3.078594 ACACCGCATTTCACAAAGTTC 57.921 42.857 0.00 0.00 0.00 3.01
2324 3813 2.226330 CCCATCGAACAGACCACAAAA 58.774 47.619 0.00 0.00 0.00 2.44
2325 3814 1.544537 CCCCATCGAACAGACCACAAA 60.545 52.381 0.00 0.00 0.00 2.83
2326 3815 0.036164 CCCCATCGAACAGACCACAA 59.964 55.000 0.00 0.00 0.00 3.33
2327 3816 0.834261 TCCCCATCGAACAGACCACA 60.834 55.000 0.00 0.00 0.00 4.17
2328 3817 0.541863 ATCCCCATCGAACAGACCAC 59.458 55.000 0.00 0.00 0.00 4.16
2329 3818 0.541392 CATCCCCATCGAACAGACCA 59.459 55.000 0.00 0.00 0.00 4.02
2330 3819 0.179045 CCATCCCCATCGAACAGACC 60.179 60.000 0.00 0.00 0.00 3.85
2331 3820 0.830648 TCCATCCCCATCGAACAGAC 59.169 55.000 0.00 0.00 0.00 3.51
2332 3821 1.417517 CATCCATCCCCATCGAACAGA 59.582 52.381 0.00 0.00 0.00 3.41
2333 3822 1.888215 CATCCATCCCCATCGAACAG 58.112 55.000 0.00 0.00 0.00 3.16
2334 3823 0.179020 GCATCCATCCCCATCGAACA 60.179 55.000 0.00 0.00 0.00 3.18
2335 3824 0.179020 TGCATCCATCCCCATCGAAC 60.179 55.000 0.00 0.00 0.00 3.95
2336 3825 0.773014 ATGCATCCATCCCCATCGAA 59.227 50.000 0.00 0.00 0.00 3.71
2337 3826 1.655372 TATGCATCCATCCCCATCGA 58.345 50.000 0.19 0.00 32.85 3.59
2338 3827 2.294979 CATATGCATCCATCCCCATCG 58.705 52.381 0.19 0.00 32.85 3.84
2339 3828 3.377253 ACATATGCATCCATCCCCATC 57.623 47.619 0.19 0.00 32.85 3.51
2340 3829 4.113841 TCTACATATGCATCCATCCCCAT 58.886 43.478 0.19 0.00 32.85 4.00
2341 3830 3.530017 TCTACATATGCATCCATCCCCA 58.470 45.455 0.19 0.00 32.85 4.96
2342 3831 4.164796 TGATCTACATATGCATCCATCCCC 59.835 45.833 0.19 0.00 32.85 4.81
2343 3832 5.363562 TGATCTACATATGCATCCATCCC 57.636 43.478 0.19 0.00 32.85 3.85
2369 3858 0.105964 TCGGTCCAAACCACACAGAG 59.894 55.000 0.00 0.00 46.86 3.35
2373 3862 1.599797 CCCTCGGTCCAAACCACAC 60.600 63.158 0.00 0.00 46.86 3.82
2421 3912 2.345760 GGACGGAGGGCGTACTTGA 61.346 63.158 0.00 0.00 0.00 3.02
2424 3915 2.754658 CTGGACGGAGGGCGTACT 60.755 66.667 0.00 0.00 0.00 2.73
2425 3916 1.880819 TTTCTGGACGGAGGGCGTAC 61.881 60.000 0.00 0.00 0.00 3.67
2426 3917 1.186917 TTTTCTGGACGGAGGGCGTA 61.187 55.000 0.00 0.00 0.00 4.42
2427 3918 2.450479 CTTTTCTGGACGGAGGGCGT 62.450 60.000 0.00 0.00 0.00 5.68
2428 3919 1.741770 CTTTTCTGGACGGAGGGCG 60.742 63.158 0.00 0.00 0.00 6.13
2429 3920 2.041115 GCTTTTCTGGACGGAGGGC 61.041 63.158 0.00 0.00 0.00 5.19
2430 3921 0.036875 AAGCTTTTCTGGACGGAGGG 59.963 55.000 0.00 0.00 0.00 4.30
2431 3922 1.160137 CAAGCTTTTCTGGACGGAGG 58.840 55.000 0.00 0.00 0.00 4.30
2432 3923 1.801178 GACAAGCTTTTCTGGACGGAG 59.199 52.381 5.33 0.00 0.00 4.63
2433 3924 1.542547 GGACAAGCTTTTCTGGACGGA 60.543 52.381 12.17 0.00 0.00 4.69
2434 3925 0.875059 GGACAAGCTTTTCTGGACGG 59.125 55.000 12.17 0.00 0.00 4.79
2435 3926 0.875059 GGGACAAGCTTTTCTGGACG 59.125 55.000 12.17 0.00 0.00 4.79
2436 3927 2.155279 GAGGGACAAGCTTTTCTGGAC 58.845 52.381 12.17 1.78 0.00 4.02
2437 3928 1.774254 TGAGGGACAAGCTTTTCTGGA 59.226 47.619 12.17 0.00 0.00 3.86
2438 3929 2.276732 TGAGGGACAAGCTTTTCTGG 57.723 50.000 12.17 0.00 0.00 3.86
2439 3930 4.553323 CATTTGAGGGACAAGCTTTTCTG 58.447 43.478 12.17 0.00 39.77 3.02
2440 3931 3.575687 CCATTTGAGGGACAAGCTTTTCT 59.424 43.478 12.17 0.43 39.77 2.52
2441 3932 3.862264 GCCATTTGAGGGACAAGCTTTTC 60.862 47.826 3.91 3.91 39.77 2.29
2442 3933 2.037641 GCCATTTGAGGGACAAGCTTTT 59.962 45.455 0.00 0.00 39.77 2.27
2443 3934 1.620323 GCCATTTGAGGGACAAGCTTT 59.380 47.619 0.00 0.00 39.77 3.51
2444 3935 1.203100 AGCCATTTGAGGGACAAGCTT 60.203 47.619 0.00 0.00 39.77 3.74
2445 3936 0.407139 AGCCATTTGAGGGACAAGCT 59.593 50.000 0.00 0.00 39.77 3.74
2446 3937 0.813821 GAGCCATTTGAGGGACAAGC 59.186 55.000 0.00 0.00 39.77 4.01
2447 3938 2.205022 TGAGCCATTTGAGGGACAAG 57.795 50.000 0.00 0.00 39.77 3.16
2448 3939 2.673775 TTGAGCCATTTGAGGGACAA 57.326 45.000 0.00 0.00 36.65 3.18
2449 3940 2.673775 TTTGAGCCATTTGAGGGACA 57.326 45.000 0.00 0.00 0.00 4.02
2450 3941 2.167075 CCATTTGAGCCATTTGAGGGAC 59.833 50.000 0.00 0.00 0.00 4.46
2451 3942 2.042842 TCCATTTGAGCCATTTGAGGGA 59.957 45.455 0.00 0.00 0.00 4.20
2452 3943 2.459644 TCCATTTGAGCCATTTGAGGG 58.540 47.619 0.00 0.00 0.00 4.30
2453 3944 3.449737 ACATCCATTTGAGCCATTTGAGG 59.550 43.478 0.00 0.00 0.00 3.86
2454 3945 4.730949 ACATCCATTTGAGCCATTTGAG 57.269 40.909 0.00 0.00 0.00 3.02
2455 3946 6.131264 AGATACATCCATTTGAGCCATTTGA 58.869 36.000 0.00 0.00 0.00 2.69
2456 3947 6.401047 AGATACATCCATTTGAGCCATTTG 57.599 37.500 0.00 0.00 0.00 2.32
2457 3948 6.208204 GCTAGATACATCCATTTGAGCCATTT 59.792 38.462 0.00 0.00 0.00 2.32
2458 3949 5.709164 GCTAGATACATCCATTTGAGCCATT 59.291 40.000 0.00 0.00 0.00 3.16
2459 3950 5.221986 TGCTAGATACATCCATTTGAGCCAT 60.222 40.000 0.00 0.00 0.00 4.40
2460 3951 4.102996 TGCTAGATACATCCATTTGAGCCA 59.897 41.667 0.00 0.00 0.00 4.75
2461 3952 4.453819 GTGCTAGATACATCCATTTGAGCC 59.546 45.833 0.00 0.00 0.00 4.70
2462 3953 5.303971 AGTGCTAGATACATCCATTTGAGC 58.696 41.667 0.00 0.00 0.00 4.26
2463 3954 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
2464 3955 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
2465 3956 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
2466 3957 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
2467 3958 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
2468 3959 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
2469 3960 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
2470 3961 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
2482 3973 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
2483 3974 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
2484 3975 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
2485 3976 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
2486 3977 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
2487 3978 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
2488 3979 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
2489 3980 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
2490 3981 5.455183 CCTCAAATGGATGTATCTAGCACCA 60.455 44.000 0.00 0.00 0.00 4.17
2491 3982 4.999950 CCTCAAATGGATGTATCTAGCACC 59.000 45.833 0.00 0.00 0.00 5.01
2492 3983 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
2493 3984 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
2494 3985 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
2495 3986 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
2496 3987 6.823286 TTGTCCCTCAAATGGATGTATCTA 57.177 37.500 0.00 0.00 33.65 1.98
2497 3988 5.715439 TTGTCCCTCAAATGGATGTATCT 57.285 39.130 0.00 0.00 33.65 1.98
2498 3989 5.888161 AGTTTGTCCCTCAAATGGATGTATC 59.112 40.000 0.00 0.00 45.88 2.24
2499 3990 5.831103 AGTTTGTCCCTCAAATGGATGTAT 58.169 37.500 0.00 0.00 45.88 2.29
2500 3991 5.255397 AGTTTGTCCCTCAAATGGATGTA 57.745 39.130 0.00 0.00 45.88 2.29
2501 3992 4.118168 AGTTTGTCCCTCAAATGGATGT 57.882 40.909 0.00 0.00 45.88 3.06
2502 3993 5.473066 AAAGTTTGTCCCTCAAATGGATG 57.527 39.130 0.00 0.00 45.88 3.51
2503 3994 6.499106 AAAAAGTTTGTCCCTCAAATGGAT 57.501 33.333 0.00 0.00 45.88 3.41
2504 3995 5.451242 CGAAAAAGTTTGTCCCTCAAATGGA 60.451 40.000 0.00 0.00 45.88 3.41
2505 3996 4.744631 CGAAAAAGTTTGTCCCTCAAATGG 59.255 41.667 0.00 0.00 45.88 3.16
2506 3997 4.744631 CCGAAAAAGTTTGTCCCTCAAATG 59.255 41.667 0.00 0.00 45.88 2.32
2507 3998 4.647399 TCCGAAAAAGTTTGTCCCTCAAAT 59.353 37.500 0.00 0.00 45.88 2.32
2508 3999 4.017808 TCCGAAAAAGTTTGTCCCTCAAA 58.982 39.130 0.00 0.00 42.79 2.69
2509 4000 3.379057 GTCCGAAAAAGTTTGTCCCTCAA 59.621 43.478 0.00 0.00 0.00 3.02
2510 4001 2.946990 GTCCGAAAAAGTTTGTCCCTCA 59.053 45.455 0.00 0.00 0.00 3.86
2511 4002 2.032290 CGTCCGAAAAAGTTTGTCCCTC 60.032 50.000 0.00 0.00 0.00 4.30
2512 4003 1.944709 CGTCCGAAAAAGTTTGTCCCT 59.055 47.619 0.00 0.00 0.00 4.20
2513 4004 1.002142 CCGTCCGAAAAAGTTTGTCCC 60.002 52.381 0.00 0.00 0.00 4.46
2514 4005 1.941975 TCCGTCCGAAAAAGTTTGTCC 59.058 47.619 0.00 0.00 0.00 4.02
2515 4006 2.032290 CCTCCGTCCGAAAAAGTTTGTC 60.032 50.000 0.00 0.00 0.00 3.18
2516 4007 1.944709 CCTCCGTCCGAAAAAGTTTGT 59.055 47.619 0.00 0.00 0.00 2.83
2517 4008 1.265905 CCCTCCGTCCGAAAAAGTTTG 59.734 52.381 0.00 0.00 0.00 2.93
2518 4009 1.141455 TCCCTCCGTCCGAAAAAGTTT 59.859 47.619 0.00 0.00 0.00 2.66
2519 4010 0.760572 TCCCTCCGTCCGAAAAAGTT 59.239 50.000 0.00 0.00 0.00 2.66
2520 4011 0.320697 CTCCCTCCGTCCGAAAAAGT 59.679 55.000 0.00 0.00 0.00 2.66
2521 4012 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
2522 4013 0.034337 CACTCCCTCCGTCCGAAAAA 59.966 55.000 0.00 0.00 0.00 1.94
2523 4014 0.828762 TCACTCCCTCCGTCCGAAAA 60.829 55.000 0.00 0.00 0.00 2.29
2524 4015 1.228644 TCACTCCCTCCGTCCGAAA 60.229 57.895 0.00 0.00 0.00 3.46
2525 4016 1.677966 CTCACTCCCTCCGTCCGAA 60.678 63.158 0.00 0.00 0.00 4.30
2526 4017 1.556373 TACTCACTCCCTCCGTCCGA 61.556 60.000 0.00 0.00 0.00 4.55
2527 4018 1.077930 TACTCACTCCCTCCGTCCG 60.078 63.158 0.00 0.00 0.00 4.79
2528 4019 0.034283 AGTACTCACTCCCTCCGTCC 60.034 60.000 0.00 0.00 0.00 4.79
2529 4020 2.093021 AGTAGTACTCACTCCCTCCGTC 60.093 54.545 0.00 0.00 36.14 4.79
2530 4021 1.914798 AGTAGTACTCACTCCCTCCGT 59.085 52.381 0.00 0.00 36.14 4.69
2531 4022 2.683867 CAAGTAGTACTCACTCCCTCCG 59.316 54.545 2.58 0.00 36.14 4.63
2532 4023 3.025262 CCAAGTAGTACTCACTCCCTCC 58.975 54.545 2.58 0.00 36.14 4.30
2533 4024 3.695556 GTCCAAGTAGTACTCACTCCCTC 59.304 52.174 2.58 0.00 36.14 4.30
2534 4025 3.699413 GTCCAAGTAGTACTCACTCCCT 58.301 50.000 2.58 0.00 36.14 4.20
2535 4026 2.422832 CGTCCAAGTAGTACTCACTCCC 59.577 54.545 2.58 0.00 36.14 4.30
2536 4027 3.341823 TCGTCCAAGTAGTACTCACTCC 58.658 50.000 2.58 0.00 36.14 3.85
2537 4028 5.564048 AATCGTCCAAGTAGTACTCACTC 57.436 43.478 2.58 0.00 36.14 3.51
2538 4029 5.711036 AGAAATCGTCCAAGTAGTACTCACT 59.289 40.000 2.58 0.00 38.91 3.41
2539 4030 5.952033 AGAAATCGTCCAAGTAGTACTCAC 58.048 41.667 2.58 0.53 0.00 3.51
2540 4031 6.585695 AAGAAATCGTCCAAGTAGTACTCA 57.414 37.500 2.58 0.00 0.00 3.41
2541 4032 7.062022 GTGAAAGAAATCGTCCAAGTAGTACTC 59.938 40.741 2.58 0.00 0.00 2.59
2672 4163 6.253946 AGTATGCCAATAAGCTAGTTCCTT 57.746 37.500 0.00 0.00 0.00 3.36
2696 4187 7.633789 AGAAATACACCATCTACACCTCAAAT 58.366 34.615 0.00 0.00 0.00 2.32
2732 4242 3.653344 TGCAACAGCAGGATATATCGAC 58.347 45.455 6.64 0.00 33.59 4.20
2753 4263 6.186957 TGTATCCAGCCTAACATCACAATTT 58.813 36.000 0.00 0.00 0.00 1.82
2905 5510 6.274157 ACACCTCAACTAGTACTTGATGAG 57.726 41.667 26.51 26.51 35.94 2.90
3511 6691 6.926272 GCTAGTAGACCTCAAATACCTGATTG 59.074 42.308 0.00 0.00 0.00 2.67
3606 6797 2.560105 GCTGCCAGGAGAAACTTGATTT 59.440 45.455 0.00 0.00 0.00 2.17
3666 6859 1.855513 ATTTGGACGACGAACACGAA 58.144 45.000 0.00 0.00 34.70 3.85
3667 6860 2.702898 TATTTGGACGACGAACACGA 57.297 45.000 0.00 0.00 34.70 4.35
3668 6861 3.774282 TTTATTTGGACGACGAACACG 57.226 42.857 0.00 0.00 0.00 4.49
3669 6862 7.253190 GCATATTTTTATTTGGACGACGAACAC 60.253 37.037 0.00 0.00 0.00 3.32
3670 6863 6.743627 GCATATTTTTATTTGGACGACGAACA 59.256 34.615 0.00 0.00 0.00 3.18
3671 6864 6.743627 TGCATATTTTTATTTGGACGACGAAC 59.256 34.615 0.00 0.00 0.00 3.95
3751 6947 8.626526 GGTTTCCTAACAAATTTGTACTTCAGA 58.373 33.333 23.53 11.96 41.31 3.27
3752 6948 8.410141 TGGTTTCCTAACAAATTTGTACTTCAG 58.590 33.333 23.53 14.50 41.31 3.02
3753 6949 8.294954 TGGTTTCCTAACAAATTTGTACTTCA 57.705 30.769 23.53 8.83 41.31 3.02
3754 6950 9.589111 TTTGGTTTCCTAACAAATTTGTACTTC 57.411 29.630 23.53 10.57 41.31 3.01
3756 6952 9.541143 CATTTGGTTTCCTAACAAATTTGTACT 57.459 29.630 23.53 12.04 41.31 2.73
3757 6953 8.279800 GCATTTGGTTTCCTAACAAATTTGTAC 58.720 33.333 23.53 15.98 41.31 2.90
3758 6954 7.442666 GGCATTTGGTTTCCTAACAAATTTGTA 59.557 33.333 23.53 5.84 41.31 2.41
3759 6955 6.262049 GGCATTTGGTTTCCTAACAAATTTGT 59.738 34.615 18.13 18.13 44.72 2.83
3760 6956 6.261826 TGGCATTTGGTTTCCTAACAAATTTG 59.738 34.615 16.67 16.67 35.92 2.32
3761 6957 6.262049 GTGGCATTTGGTTTCCTAACAAATTT 59.738 34.615 0.00 0.00 35.92 1.82
3762 6958 5.762711 GTGGCATTTGGTTTCCTAACAAATT 59.237 36.000 0.00 0.00 35.92 1.82
3763 6959 5.304778 GTGGCATTTGGTTTCCTAACAAAT 58.695 37.500 0.00 0.00 35.92 2.32
3764 6960 4.443598 GGTGGCATTTGGTTTCCTAACAAA 60.444 41.667 0.00 0.00 35.92 2.83
3765 6961 3.070302 GGTGGCATTTGGTTTCCTAACAA 59.930 43.478 0.00 0.00 35.92 2.83
3766 6962 2.630580 GGTGGCATTTGGTTTCCTAACA 59.369 45.455 0.00 0.00 35.92 2.41
3767 6963 2.897326 AGGTGGCATTTGGTTTCCTAAC 59.103 45.455 0.00 0.00 0.00 2.34
3768 6964 2.896685 CAGGTGGCATTTGGTTTCCTAA 59.103 45.455 0.00 0.00 0.00 2.69
3769 6965 2.109128 TCAGGTGGCATTTGGTTTCCTA 59.891 45.455 0.00 0.00 0.00 2.94
3770 6966 1.133199 TCAGGTGGCATTTGGTTTCCT 60.133 47.619 0.00 0.00 0.00 3.36
3771 6967 1.000843 GTCAGGTGGCATTTGGTTTCC 59.999 52.381 0.00 0.00 0.00 3.13
3772 6968 1.335872 CGTCAGGTGGCATTTGGTTTC 60.336 52.381 0.00 0.00 0.00 2.78
3773 6969 0.673437 CGTCAGGTGGCATTTGGTTT 59.327 50.000 0.00 0.00 0.00 3.27
3774 6970 0.179004 TCGTCAGGTGGCATTTGGTT 60.179 50.000 0.00 0.00 0.00 3.67
3775 6971 0.606401 CTCGTCAGGTGGCATTTGGT 60.606 55.000 0.00 0.00 0.00 3.67
3776 6972 1.926511 GCTCGTCAGGTGGCATTTGG 61.927 60.000 0.00 0.00 0.00 3.28
3777 6973 1.236616 TGCTCGTCAGGTGGCATTTG 61.237 55.000 0.00 0.00 0.00 2.32
3778 6974 1.073025 TGCTCGTCAGGTGGCATTT 59.927 52.632 0.00 0.00 0.00 2.32
3779 6975 1.672356 GTGCTCGTCAGGTGGCATT 60.672 57.895 0.00 0.00 37.05 3.56
3780 6976 2.046892 GTGCTCGTCAGGTGGCAT 60.047 61.111 0.00 0.00 37.05 4.40
3781 6977 3.233980 AGTGCTCGTCAGGTGGCA 61.234 61.111 0.00 0.00 0.00 4.92
3782 6978 2.740055 CAGTGCTCGTCAGGTGGC 60.740 66.667 0.00 0.00 0.00 5.01
3783 6979 1.373497 GACAGTGCTCGTCAGGTGG 60.373 63.158 0.00 0.00 33.43 4.61
3784 6980 0.249447 TTGACAGTGCTCGTCAGGTG 60.249 55.000 11.29 0.00 43.85 4.00
3785 6981 0.464036 TTTGACAGTGCTCGTCAGGT 59.536 50.000 11.29 0.00 43.85 4.00
3786 6982 1.261619 GTTTTGACAGTGCTCGTCAGG 59.738 52.381 11.29 0.00 43.85 3.86
3787 6983 2.205074 AGTTTTGACAGTGCTCGTCAG 58.795 47.619 11.29 0.00 43.85 3.51
3788 6984 2.159099 AGAGTTTTGACAGTGCTCGTCA 60.159 45.455 8.61 8.61 41.53 4.35
3789 6985 2.219674 CAGAGTTTTGACAGTGCTCGTC 59.780 50.000 0.00 4.53 0.00 4.20
3790 6986 2.159099 TCAGAGTTTTGACAGTGCTCGT 60.159 45.455 0.00 0.00 0.00 4.18
3791 6987 2.473816 TCAGAGTTTTGACAGTGCTCG 58.526 47.619 0.00 0.00 0.00 5.03
3792 6988 3.873952 ACTTCAGAGTTTTGACAGTGCTC 59.126 43.478 0.00 0.00 29.87 4.26
3793 6989 3.878778 ACTTCAGAGTTTTGACAGTGCT 58.121 40.909 0.00 0.00 29.87 4.40
3794 6990 4.570772 TGTACTTCAGAGTTTTGACAGTGC 59.429 41.667 0.00 0.00 37.33 4.40
3795 6991 6.662414 TTGTACTTCAGAGTTTTGACAGTG 57.338 37.500 0.00 0.00 37.33 3.66
3796 6992 7.865706 ATTTGTACTTCAGAGTTTTGACAGT 57.134 32.000 0.00 0.00 37.33 3.55
3797 6993 9.013490 CAAATTTGTACTTCAGAGTTTTGACAG 57.987 33.333 10.15 0.00 37.33 3.51
3798 6994 8.519526 ACAAATTTGTACTTCAGAGTTTTGACA 58.480 29.630 22.10 0.00 40.16 3.58
3799 6995 8.911247 ACAAATTTGTACTTCAGAGTTTTGAC 57.089 30.769 22.10 0.00 40.16 3.18
3803 6999 9.403583 TCCTAACAAATTTGTACTTCAGAGTTT 57.596 29.630 23.53 6.61 41.31 2.66
3804 7000 8.974060 TCCTAACAAATTTGTACTTCAGAGTT 57.026 30.769 23.53 7.10 41.31 3.01
3805 7001 8.974060 TTCCTAACAAATTTGTACTTCAGAGT 57.026 30.769 23.53 7.80 41.31 3.24
3806 7002 9.665264 GTTTCCTAACAAATTTGTACTTCAGAG 57.335 33.333 23.53 11.69 41.31 3.35
4005 7275 1.225704 CCTCCATGGACAGAAGGGC 59.774 63.158 11.44 0.00 38.35 5.19
4071 7397 4.698201 TTACATTCAGGTTCAGGTGTCA 57.302 40.909 0.00 0.00 0.00 3.58
4259 7604 1.072965 ACTCAAAGTCCAAGGCTCCAG 59.927 52.381 0.00 0.00 0.00 3.86
4260 7605 1.140312 ACTCAAAGTCCAAGGCTCCA 58.860 50.000 0.00 0.00 0.00 3.86
4299 7644 3.958147 AAGTGCACGCCCCTGATCG 62.958 63.158 12.01 0.00 0.00 3.69
4308 7653 2.111756 CTGAAACTCAAAAGTGCACGC 58.888 47.619 12.01 0.00 35.36 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.