Multiple sequence alignment - TraesCS2D01G458300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G458300 chr2D 100.000 5226 0 0 1 5226 565314421 565309196 0.000000e+00 9651.0
1 TraesCS2D01G458300 chr2D 100.000 2266 0 0 5500 7765 565308922 565306657 0.000000e+00 4185.0
2 TraesCS2D01G458300 chr2D 89.460 389 33 5 4628 5010 390624376 390624762 1.170000e-132 484.0
3 TraesCS2D01G458300 chr2D 82.205 517 73 14 7028 7536 29835796 29835291 2.000000e-115 427.0
4 TraesCS2D01G458300 chr2D 82.618 466 64 11 7028 7487 101939196 101938742 5.650000e-106 396.0
5 TraesCS2D01G458300 chr2D 97.647 85 2 0 7681 7765 594555107 594555191 6.280000e-31 147.0
6 TraesCS2D01G458300 chr2D 91.489 94 7 1 6936 7028 539013482 539013389 2.270000e-25 128.0
7 TraesCS2D01G458300 chr2B 97.050 3186 75 9 1830 5010 677348308 677345137 0.000000e+00 5345.0
8 TraesCS2D01G458300 chr2B 91.319 1440 105 16 5500 6930 677344952 677343524 0.000000e+00 1949.0
9 TraesCS2D01G458300 chr2B 90.749 854 46 14 454 1293 677349416 677348582 0.000000e+00 1109.0
10 TraesCS2D01G458300 chr2B 89.300 486 33 11 1 468 677349918 677349434 6.710000e-165 592.0
11 TraesCS2D01G458300 chr2B 82.262 451 66 8 7044 7489 569123483 569123042 2.050000e-100 377.0
12 TraesCS2D01G458300 chr2B 97.706 218 5 0 5009 5226 677345211 677344994 7.360000e-100 375.0
13 TraesCS2D01G458300 chr2B 91.636 275 13 3 1406 1670 677348581 677348307 9.520000e-99 372.0
14 TraesCS2D01G458300 chr2A 97.336 2290 47 11 2728 5010 705826837 705824555 0.000000e+00 3879.0
15 TraesCS2D01G458300 chr2A 94.623 1432 64 7 5500 6920 705824378 705822949 0.000000e+00 2206.0
16 TraesCS2D01G458300 chr2A 91.593 904 53 11 785 1670 705828433 705827535 0.000000e+00 1227.0
17 TraesCS2D01G458300 chr2A 97.724 703 16 0 1982 2684 705827539 705826837 0.000000e+00 1210.0
18 TraesCS2D01G458300 chr2A 84.385 602 59 19 41 630 705829133 705828555 6.810000e-155 558.0
19 TraesCS2D01G458300 chr2A 88.520 392 32 9 4628 5010 180200446 180200059 5.490000e-126 462.0
20 TraesCS2D01G458300 chr2A 83.832 501 66 9 7028 7523 438722114 438722604 5.490000e-126 462.0
21 TraesCS2D01G458300 chr2A 97.717 219 4 1 5009 5226 705824630 705824412 7.360000e-100 375.0
22 TraesCS2D01G458300 chr2A 91.441 222 13 3 5009 5226 180200136 180199917 4.550000e-77 300.0
23 TraesCS2D01G458300 chr2A 90.411 219 19 2 5009 5226 695657205 695657422 3.550000e-73 287.0
24 TraesCS2D01G458300 chr2A 83.810 105 13 1 7582 7682 705822716 705822612 6.410000e-16 97.1
25 TraesCS2D01G458300 chr2A 100.000 28 0 0 1833 1860 705827533 705827506 1.400000e-02 52.8
26 TraesCS2D01G458300 chr1D 90.746 389 28 5 4628 5010 468416188 468416574 5.370000e-141 512.0
27 TraesCS2D01G458300 chr1D 96.429 84 3 0 7682 7765 450517095 450517178 1.050000e-28 139.0
28 TraesCS2D01G458300 chr4A 90.231 389 30 5 4628 5010 677889101 677888715 1.160000e-137 501.0
29 TraesCS2D01G458300 chr4A 88.974 390 34 6 4628 5010 29802689 29802302 2.540000e-129 473.0
30 TraesCS2D01G458300 chr4A 90.541 222 15 3 5009 5226 29802379 29802160 9.860000e-74 289.0
31 TraesCS2D01G458300 chr4A 93.293 164 9 2 1664 1826 517406638 517406476 2.800000e-59 241.0
32 TraesCS2D01G458300 chr6A 89.031 392 30 9 4628 5010 68549202 68549589 2.540000e-129 473.0
33 TraesCS2D01G458300 chr6A 79.798 594 81 25 6935 7523 18603607 18603048 5.650000e-106 396.0
34 TraesCS2D01G458300 chr7A 88.175 389 34 10 4628 5008 104997909 104997525 3.300000e-123 453.0
35 TraesCS2D01G458300 chr7A 81.460 507 80 13 7028 7530 641981480 641980984 3.370000e-108 403.0
36 TraesCS2D01G458300 chr4D 82.072 502 71 13 7028 7522 119360559 119361048 2.020000e-110 411.0
37 TraesCS2D01G458300 chr4D 84.326 319 37 11 7028 7341 118385390 118385080 4.550000e-77 300.0
38 TraesCS2D01G458300 chr3A 81.891 497 74 14 7028 7518 271598706 271599192 9.380000e-109 405.0
39 TraesCS2D01G458300 chr3A 81.319 455 65 18 7076 7523 180421253 180421694 1.240000e-92 351.0
40 TraesCS2D01G458300 chr3A 93.373 166 9 2 1667 1831 585033785 585033621 2.160000e-60 244.0
41 TraesCS2D01G458300 chr3A 85.714 91 9 3 6935 7022 52445412 52445501 8.300000e-15 93.5
42 TraesCS2D01G458300 chr3D 80.165 484 81 9 7043 7521 524664243 524664716 1.600000e-91 348.0
43 TraesCS2D01G458300 chr3D 77.629 523 75 18 6935 7451 607875564 607875078 5.930000e-71 279.0
44 TraesCS2D01G458300 chr1B 82.297 418 58 14 7053 7465 268283762 268284168 1.600000e-91 348.0
45 TraesCS2D01G458300 chr7B 92.202 218 11 3 5009 5222 301890109 301890324 3.520000e-78 303.0
46 TraesCS2D01G458300 chr7B 92.045 176 11 3 1661 1836 618334170 618334342 2.160000e-60 244.0
47 TraesCS2D01G458300 chr7B 92.045 176 11 3 1661 1836 618761193 618761021 2.160000e-60 244.0
48 TraesCS2D01G458300 chr7B 91.477 176 11 3 1661 1836 618850499 618850328 1.010000e-58 239.0
49 TraesCS2D01G458300 chr7B 95.349 86 4 0 7680 7765 713921152 713921237 3.780000e-28 137.0
50 TraesCS2D01G458300 chr7B 95.349 86 4 0 7680 7765 713967044 713967129 3.780000e-28 137.0
51 TraesCS2D01G458300 chr7B 86.957 92 10 1 6935 7024 408823362 408823453 1.380000e-17 102.0
52 TraesCS2D01G458300 chr6D 91.324 219 12 4 5009 5223 393959850 393960065 7.620000e-75 292.0
53 TraesCS2D01G458300 chr6D 92.553 94 6 1 7672 7765 51477873 51477965 4.890000e-27 134.0
54 TraesCS2D01G458300 chr5A 91.284 218 13 3 5009 5222 219234428 219234643 7.620000e-75 292.0
55 TraesCS2D01G458300 chr5A 90.411 219 19 2 5009 5226 401726945 401727162 3.550000e-73 287.0
56 TraesCS2D01G458300 chrUn 92.571 175 7 6 1654 1826 34210739 34210909 6.020000e-61 246.0
57 TraesCS2D01G458300 chr6B 92.982 171 9 3 1657 1826 119526982 119526814 6.020000e-61 246.0
58 TraesCS2D01G458300 chr6B 96.429 84 3 0 7682 7765 170871413 170871496 1.050000e-28 139.0
59 TraesCS2D01G458300 chr5B 92.486 173 9 4 1665 1835 498886149 498885979 2.160000e-60 244.0
60 TraesCS2D01G458300 chr5B 95.349 86 4 0 7680 7765 682524094 682524179 3.780000e-28 137.0
61 TraesCS2D01G458300 chr7D 89.247 186 16 3 1650 1832 296507866 296507682 6.060000e-56 230.0
62 TraesCS2D01G458300 chr7D 96.429 84 3 0 7682 7765 546810605 546810522 1.050000e-28 139.0
63 TraesCS2D01G458300 chr7D 84.270 89 13 1 6935 7022 104189150 104189238 1.390000e-12 86.1
64 TraesCS2D01G458300 chr7D 83.146 89 13 1 6935 7021 69245383 69245295 6.460000e-11 80.5
65 TraesCS2D01G458300 chr5D 96.429 84 3 0 7682 7765 468095395 468095312 1.050000e-28 139.0
66 TraesCS2D01G458300 chr3B 94.203 69 4 0 6936 7004 817421010 817420942 1.070000e-18 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G458300 chr2D 565306657 565314421 7764 True 6918.000000 9651 100.0000 1 7765 2 chr2D.!!$R4 7764
1 TraesCS2D01G458300 chr2D 29835291 29835796 505 True 427.000000 427 82.2050 7028 7536 1 chr2D.!!$R1 508
2 TraesCS2D01G458300 chr2B 677343524 677349918 6394 True 1623.666667 5345 92.9600 1 6930 6 chr2B.!!$R2 6929
3 TraesCS2D01G458300 chr2A 705822612 705829133 6521 True 1200.612500 3879 93.3985 41 7682 8 chr2A.!!$R2 7641
4 TraesCS2D01G458300 chr2A 180199917 180200446 529 True 381.000000 462 89.9805 4628 5226 2 chr2A.!!$R1 598
5 TraesCS2D01G458300 chr4A 29802160 29802689 529 True 381.000000 473 89.7575 4628 5226 2 chr4A.!!$R3 598
6 TraesCS2D01G458300 chr6A 18603048 18603607 559 True 396.000000 396 79.7980 6935 7523 1 chr6A.!!$R1 588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
546 600 0.672342 GGTCATGATCATTGGCTGGC 59.328 55.000 5.16 0.0 0.00 4.85 F
1368 1449 0.307760 GTGAAACGTCTGGTGCTTGG 59.692 55.000 0.00 0.0 0.00 3.61 F
1373 1454 1.194781 ACGTCTGGTGCTTGGAGGAT 61.195 55.000 0.00 0.0 0.00 3.24 F
1494 1583 1.290009 GGTGGCGCTTGCAGATTTT 59.710 52.632 7.64 0.0 41.71 1.82 F
2178 2278 1.576356 CTACTCGCTCATTTCCAGCC 58.424 55.000 0.00 0.0 32.83 4.85 F
3725 3827 5.588648 TCTTTGTTTTCAGTACCTTGTGGAG 59.411 40.000 0.00 0.0 37.04 3.86 F
4769 4876 4.968812 TGTATCCAACAGCAACATGATG 57.031 40.909 0.00 0.0 40.09 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1393 1474 0.405585 CATGACCACCCCCAAAGTCT 59.594 55.000 0.00 0.00 0.00 3.24 R
2178 2278 1.300080 CAAGGGTGCAAAGCCGTTG 60.300 57.895 11.45 11.45 42.76 4.10 R
3127 3227 2.362889 CCACATCCTGCAACCCCC 60.363 66.667 0.00 0.00 0.00 5.40 R
3725 3827 1.009829 CGGAGCTTACACATTCAGGC 58.990 55.000 0.00 0.00 0.00 4.85 R
3860 3962 6.375174 CACCATGGAGTGTTTCAGATATCAAA 59.625 38.462 21.47 0.00 32.89 2.69 R
5012 5124 0.039617 GCAATTACGTGGCTTGTGCA 60.040 50.000 0.00 0.00 41.91 4.57 R
7004 7145 0.101219 CATCTCACGGAGCGATGTCA 59.899 55.000 0.00 0.00 32.07 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 79 9.631452 CTTTTCTTGAAAGAGACATTATTTCCC 57.369 33.333 0.00 0.00 46.24 3.97
240 251 9.258629 TCCAGAGAAACATGATATTTTGGAATT 57.741 29.630 0.00 0.00 0.00 2.17
281 292 8.806429 ACATCAAGTATGTCATGGAATTGTTA 57.194 30.769 0.00 0.00 46.15 2.41
282 293 8.677300 ACATCAAGTATGTCATGGAATTGTTAC 58.323 33.333 0.00 0.00 46.15 2.50
331 351 8.984764 CATTTATGATTCAAAATATGTGGCTGG 58.015 33.333 0.00 0.00 0.00 4.85
399 419 9.499479 GACATTAGATGGTTCATGATCTACATT 57.501 33.333 0.00 0.00 32.14 2.71
411 431 8.407457 TCATGATCTACATTTCAACTTACGTC 57.593 34.615 0.00 0.00 37.07 4.34
460 512 7.171630 AGAGTTAGATACACACGAGGAAAAT 57.828 36.000 0.00 0.00 0.00 1.82
493 545 8.644318 AATTTCTTTGAGATGATTAATGCAGC 57.356 30.769 0.00 0.00 0.00 5.25
501 553 5.597806 AGATGATTAATGCAGCCAAACATG 58.402 37.500 0.00 0.00 0.00 3.21
509 563 1.086696 CAGCCAAACATGGGTACTCG 58.913 55.000 0.00 0.00 37.62 4.18
512 566 2.004733 GCCAAACATGGGTACTCGTAC 58.995 52.381 0.00 0.00 35.40 3.67
545 599 2.228059 GAGGTCATGATCATTGGCTGG 58.772 52.381 9.06 0.00 0.00 4.85
546 600 0.672342 GGTCATGATCATTGGCTGGC 59.328 55.000 5.16 0.00 0.00 4.85
702 756 9.847224 ATATAAAATGACACGGTAGAATCCTTT 57.153 29.630 0.00 0.00 0.00 3.11
703 757 6.894339 AAAATGACACGGTAGAATCCTTTT 57.106 33.333 0.00 0.00 0.00 2.27
749 803 3.994392 ACATTCATTATATCCGTCGGCAC 59.006 43.478 6.34 0.00 0.00 5.01
753 807 4.329392 TCATTATATCCGTCGGCACTCTA 58.671 43.478 6.34 0.00 0.00 2.43
755 825 4.696899 TTATATCCGTCGGCACTCTATG 57.303 45.455 6.34 0.00 0.00 2.23
762 832 2.096980 CGTCGGCACTCTATGTAAGACA 59.903 50.000 0.00 0.00 32.26 3.41
772 842 6.372659 CACTCTATGTAAGACATTTTGGCAGT 59.627 38.462 0.00 0.00 39.88 4.40
773 843 6.372659 ACTCTATGTAAGACATTTTGGCAGTG 59.627 38.462 0.00 0.00 39.88 3.66
774 844 6.237901 TCTATGTAAGACATTTTGGCAGTGT 58.762 36.000 0.00 2.51 39.88 3.55
775 845 7.390823 TCTATGTAAGACATTTTGGCAGTGTA 58.609 34.615 0.00 0.00 39.88 2.90
776 846 5.682943 TGTAAGACATTTTGGCAGTGTAC 57.317 39.130 2.84 0.00 0.00 2.90
777 847 3.896648 AAGACATTTTGGCAGTGTACG 57.103 42.857 2.84 0.00 0.00 3.67
973 1050 1.826487 GACTCTCTCCGCTCCCTCC 60.826 68.421 0.00 0.00 0.00 4.30
1015 1092 3.402681 CCATGGTGGAGAGGCGGT 61.403 66.667 2.57 0.00 40.96 5.68
1265 1342 2.497770 GACGGTATGTGGTCCCGG 59.502 66.667 0.00 0.00 45.85 5.73
1293 1370 1.878088 CTCTCCGATCGAATTCCGGTA 59.122 52.381 18.66 0.00 43.40 4.02
1295 1372 1.607628 CTCCGATCGAATTCCGGTACT 59.392 52.381 18.66 0.00 43.40 2.73
1303 1384 1.003928 GAATTCCGGTACTGGGGTGTT 59.996 52.381 20.89 10.14 0.00 3.32
1319 1400 3.585428 TTGGTTGGATGGCCGGGT 61.585 61.111 2.18 0.00 36.79 5.28
1321 1402 3.068064 GGTTGGATGGCCGGGTTG 61.068 66.667 2.18 0.00 36.79 3.77
1337 1418 1.279846 GGTTGGGGGTTCGATCACTTA 59.720 52.381 0.00 0.00 0.00 2.24
1356 1437 4.700213 ACTTAGGGGATGAATTGTGAAACG 59.300 41.667 0.00 0.00 42.39 3.60
1368 1449 0.307760 GTGAAACGTCTGGTGCTTGG 59.692 55.000 0.00 0.00 0.00 3.61
1373 1454 1.194781 ACGTCTGGTGCTTGGAGGAT 61.195 55.000 0.00 0.00 0.00 3.24
1393 1474 3.744238 TGAGTGAATTTGGTCTCGTCA 57.256 42.857 0.00 0.00 0.00 4.35
1394 1475 3.653344 TGAGTGAATTTGGTCTCGTCAG 58.347 45.455 0.00 0.00 0.00 3.51
1395 1476 3.320826 TGAGTGAATTTGGTCTCGTCAGA 59.679 43.478 0.00 0.00 0.00 3.27
1488 1577 4.892965 AACTGGGTGGCGCTTGCA 62.893 61.111 7.64 0.00 41.71 4.08
1494 1583 1.290009 GGTGGCGCTTGCAGATTTT 59.710 52.632 7.64 0.00 41.71 1.82
1626 1725 5.731599 TTCGTTTTTGCAATTTTCAGCAT 57.268 30.435 0.00 0.00 40.94 3.79
1642 1741 6.839124 TTCAGCATTCAAATTGGTAGACAT 57.161 33.333 0.00 0.00 0.00 3.06
1668 1767 8.807118 TGACTATCTTCTGTTGAGACTAAATGT 58.193 33.333 0.00 0.00 0.00 2.71
1673 1772 7.603651 TCTTCTGTTGAGACTAAATGTACTCC 58.396 38.462 0.00 0.00 0.00 3.85
1674 1773 6.282199 TCTGTTGAGACTAAATGTACTCCC 57.718 41.667 0.00 0.00 0.00 4.30
1675 1774 6.017192 TCTGTTGAGACTAAATGTACTCCCT 58.983 40.000 0.00 0.00 0.00 4.20
1676 1775 6.037786 TGTTGAGACTAAATGTACTCCCTG 57.962 41.667 0.00 0.00 0.00 4.45
1677 1776 5.046591 TGTTGAGACTAAATGTACTCCCTGG 60.047 44.000 0.00 0.00 0.00 4.45
1678 1777 4.030913 TGAGACTAAATGTACTCCCTGGG 58.969 47.826 6.33 6.33 0.00 4.45
1679 1778 4.031611 GAGACTAAATGTACTCCCTGGGT 58.968 47.826 13.56 0.00 0.00 4.51
1680 1779 4.436079 AGACTAAATGTACTCCCTGGGTT 58.564 43.478 13.56 3.64 0.00 4.11
1681 1780 4.470304 AGACTAAATGTACTCCCTGGGTTC 59.530 45.833 13.56 2.73 0.00 3.62
1682 1781 3.522343 ACTAAATGTACTCCCTGGGTTCC 59.478 47.826 13.56 0.16 0.00 3.62
1683 1782 2.361085 AATGTACTCCCTGGGTTCCT 57.639 50.000 13.56 0.00 0.00 3.36
1684 1783 3.502051 AATGTACTCCCTGGGTTCCTA 57.498 47.619 13.56 0.00 0.00 2.94
1685 1784 3.502051 ATGTACTCCCTGGGTTCCTAA 57.498 47.619 13.56 0.00 0.00 2.69
1686 1785 3.278987 TGTACTCCCTGGGTTCCTAAA 57.721 47.619 13.56 0.00 0.00 1.85
1687 1786 3.810623 TGTACTCCCTGGGTTCCTAAAT 58.189 45.455 13.56 0.00 0.00 1.40
1688 1787 4.962839 TGTACTCCCTGGGTTCCTAAATA 58.037 43.478 13.56 0.00 0.00 1.40
1689 1788 5.544682 TGTACTCCCTGGGTTCCTAAATAT 58.455 41.667 13.56 0.00 0.00 1.28
1690 1789 6.695624 TGTACTCCCTGGGTTCCTAAATATA 58.304 40.000 13.56 0.00 0.00 0.86
1691 1790 7.140990 TGTACTCCCTGGGTTCCTAAATATAA 58.859 38.462 13.56 0.00 0.00 0.98
1692 1791 6.765355 ACTCCCTGGGTTCCTAAATATAAG 57.235 41.667 13.56 0.00 0.00 1.73
1693 1792 6.218053 ACTCCCTGGGTTCCTAAATATAAGT 58.782 40.000 13.56 0.60 0.00 2.24
1694 1793 6.329460 ACTCCCTGGGTTCCTAAATATAAGTC 59.671 42.308 13.56 0.00 0.00 3.01
1695 1794 6.458784 TCCCTGGGTTCCTAAATATAAGTCT 58.541 40.000 13.56 0.00 0.00 3.24
1696 1795 6.912561 TCCCTGGGTTCCTAAATATAAGTCTT 59.087 38.462 13.56 0.00 0.00 3.01
1697 1796 7.407918 TCCCTGGGTTCCTAAATATAAGTCTTT 59.592 37.037 13.56 0.00 0.00 2.52
1698 1797 8.059461 CCCTGGGTTCCTAAATATAAGTCTTTT 58.941 37.037 3.97 0.00 0.00 2.27
1699 1798 9.121658 CCTGGGTTCCTAAATATAAGTCTTTTC 57.878 37.037 0.00 0.00 0.00 2.29
1700 1799 9.681062 CTGGGTTCCTAAATATAAGTCTTTTCA 57.319 33.333 0.00 0.00 0.00 2.69
1701 1800 9.681062 TGGGTTCCTAAATATAAGTCTTTTCAG 57.319 33.333 0.00 0.00 0.00 3.02
1702 1801 9.901172 GGGTTCCTAAATATAAGTCTTTTCAGA 57.099 33.333 0.00 0.00 0.00 3.27
1714 1813 6.672266 AGTCTTTTCAGAGATTCCACTACA 57.328 37.500 0.00 0.00 0.00 2.74
1715 1814 7.067496 AGTCTTTTCAGAGATTCCACTACAA 57.933 36.000 0.00 0.00 0.00 2.41
1716 1815 7.509546 AGTCTTTTCAGAGATTCCACTACAAA 58.490 34.615 0.00 0.00 0.00 2.83
1717 1816 7.442666 AGTCTTTTCAGAGATTCCACTACAAAC 59.557 37.037 0.00 0.00 0.00 2.93
1718 1817 7.442666 GTCTTTTCAGAGATTCCACTACAAACT 59.557 37.037 0.00 0.00 0.00 2.66
1719 1818 8.647796 TCTTTTCAGAGATTCCACTACAAACTA 58.352 33.333 0.00 0.00 0.00 2.24
1720 1819 8.603242 TTTTCAGAGATTCCACTACAAACTAC 57.397 34.615 0.00 0.00 0.00 2.73
1721 1820 6.911250 TCAGAGATTCCACTACAAACTACA 57.089 37.500 0.00 0.00 0.00 2.74
1722 1821 7.482169 TCAGAGATTCCACTACAAACTACAT 57.518 36.000 0.00 0.00 0.00 2.29
1723 1822 8.589701 TCAGAGATTCCACTACAAACTACATA 57.410 34.615 0.00 0.00 0.00 2.29
1724 1823 8.467598 TCAGAGATTCCACTACAAACTACATAC 58.532 37.037 0.00 0.00 0.00 2.39
1725 1824 7.432545 CAGAGATTCCACTACAAACTACATACG 59.567 40.741 0.00 0.00 0.00 3.06
1726 1825 6.570692 AGATTCCACTACAAACTACATACGG 58.429 40.000 0.00 0.00 0.00 4.02
1727 1826 5.981088 TTCCACTACAAACTACATACGGA 57.019 39.130 0.00 0.00 0.00 4.69
1728 1827 6.534475 TTCCACTACAAACTACATACGGAT 57.466 37.500 0.00 0.00 0.00 4.18
1729 1828 5.898174 TCCACTACAAACTACATACGGATG 58.102 41.667 5.94 5.94 39.16 3.51
1731 1830 6.602803 TCCACTACAAACTACATACGGATGTA 59.397 38.462 19.32 19.32 44.77 2.29
1732 1831 7.286087 TCCACTACAAACTACATACGGATGTAT 59.714 37.037 20.64 8.38 45.42 2.29
1733 1832 8.570488 CCACTACAAACTACATACGGATGTATA 58.430 37.037 20.64 9.08 45.42 1.47
1771 1870 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
1772 1871 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
1773 1872 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
1774 1873 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
1775 1874 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
1776 1875 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
1777 1876 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1778 1877 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1779 1878 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1780 1879 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1781 1880 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1782 1881 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1783 1882 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
1784 1883 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
1785 1884 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
1786 1885 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
1787 1886 5.648178 TTTGCTCCGTATGTAGTCACTTA 57.352 39.130 0.00 0.00 0.00 2.24
1788 1887 5.847111 TTGCTCCGTATGTAGTCACTTAT 57.153 39.130 0.00 0.00 0.00 1.73
1789 1888 5.847111 TGCTCCGTATGTAGTCACTTATT 57.153 39.130 0.00 0.00 0.00 1.40
1790 1889 5.588240 TGCTCCGTATGTAGTCACTTATTG 58.412 41.667 0.00 0.00 0.00 1.90
1791 1890 5.358725 TGCTCCGTATGTAGTCACTTATTGA 59.641 40.000 0.00 0.00 0.00 2.57
1792 1891 6.127563 TGCTCCGTATGTAGTCACTTATTGAA 60.128 38.462 0.00 0.00 35.39 2.69
1793 1892 6.755141 GCTCCGTATGTAGTCACTTATTGAAA 59.245 38.462 0.00 0.00 35.39 2.69
1794 1893 7.438459 GCTCCGTATGTAGTCACTTATTGAAAT 59.562 37.037 0.00 0.00 35.39 2.17
1795 1894 8.867112 TCCGTATGTAGTCACTTATTGAAATC 57.133 34.615 0.00 0.00 35.39 2.17
1796 1895 8.692710 TCCGTATGTAGTCACTTATTGAAATCT 58.307 33.333 0.00 0.00 35.39 2.40
1797 1896 8.969267 CCGTATGTAGTCACTTATTGAAATCTC 58.031 37.037 0.00 0.00 35.39 2.75
1798 1897 9.737427 CGTATGTAGTCACTTATTGAAATCTCT 57.263 33.333 0.00 0.00 35.39 3.10
1842 1941 9.301897 GGAATGGAGGAAATATTAAACAGCTAT 57.698 33.333 0.00 0.00 0.00 2.97
1893 1992 9.747898 ATATGTTATTTCCCTGTACTTTGTTCA 57.252 29.630 0.00 0.00 0.00 3.18
2082 2182 2.653702 GATCGGCCATCCCTCGAG 59.346 66.667 5.13 5.13 36.34 4.04
2112 2212 3.638160 AGAGAGAGCATCCTGATTCTGAC 59.362 47.826 0.00 0.00 33.66 3.51
2178 2278 1.576356 CTACTCGCTCATTTCCAGCC 58.424 55.000 0.00 0.00 32.83 4.85
2703 2803 7.332213 TCAGACATGTTTGAATGAAGAAACA 57.668 32.000 16.17 0.00 44.07 2.83
3399 3500 7.272731 GCGATGGTATTTACTTTGTTTCCTTTC 59.727 37.037 0.00 0.00 0.00 2.62
3725 3827 5.588648 TCTTTGTTTTCAGTACCTTGTGGAG 59.411 40.000 0.00 0.00 37.04 3.86
3860 3962 8.997734 ACTATAAATGAAGACCAGAGGAAGAAT 58.002 33.333 0.00 0.00 0.00 2.40
4516 4621 8.870160 AGCTAAGATATTGCATTCTATCGATC 57.130 34.615 0.00 0.00 31.68 3.69
4582 4687 6.578944 TGAAACTGCTAACTTGTGTTCTCTA 58.421 36.000 0.00 0.00 37.59 2.43
4703 4809 7.093201 TGGGAAGGTAGGTGTAGTAGTTTTATG 60.093 40.741 0.00 0.00 0.00 1.90
4769 4876 4.968812 TGTATCCAACAGCAACATGATG 57.031 40.909 0.00 0.00 40.09 3.07
4994 5106 9.899661 TGCACATATACTTAGGTTTTCAGTATT 57.100 29.630 0.00 0.00 35.70 1.89
5014 5126 7.533426 AGTATTTCACTGTCAATTTCATCTGC 58.467 34.615 0.00 0.00 35.62 4.26
5015 5127 5.771153 TTTCACTGTCAATTTCATCTGCA 57.229 34.783 0.00 0.00 0.00 4.41
5016 5128 4.754372 TCACTGTCAATTTCATCTGCAC 57.246 40.909 0.00 0.00 0.00 4.57
5017 5129 4.136051 TCACTGTCAATTTCATCTGCACA 58.864 39.130 0.00 0.00 0.00 4.57
5018 5130 4.579753 TCACTGTCAATTTCATCTGCACAA 59.420 37.500 0.00 0.00 0.00 3.33
5019 5131 4.915667 CACTGTCAATTTCATCTGCACAAG 59.084 41.667 0.00 0.00 0.00 3.16
5020 5132 3.904571 TGTCAATTTCATCTGCACAAGC 58.095 40.909 0.00 0.00 42.57 4.01
5021 5133 3.248266 GTCAATTTCATCTGCACAAGCC 58.752 45.455 0.00 0.00 41.13 4.35
5022 5134 2.892215 TCAATTTCATCTGCACAAGCCA 59.108 40.909 0.00 0.00 41.13 4.75
5023 5135 2.991190 CAATTTCATCTGCACAAGCCAC 59.009 45.455 0.00 0.00 41.13 5.01
5024 5136 0.592637 TTTCATCTGCACAAGCCACG 59.407 50.000 0.00 0.00 41.13 4.94
5025 5137 0.534877 TTCATCTGCACAAGCCACGT 60.535 50.000 0.00 0.00 41.13 4.49
5026 5138 0.320050 TCATCTGCACAAGCCACGTA 59.680 50.000 0.00 0.00 41.13 3.57
5027 5139 1.155889 CATCTGCACAAGCCACGTAA 58.844 50.000 0.00 0.00 41.13 3.18
5028 5140 1.739466 CATCTGCACAAGCCACGTAAT 59.261 47.619 0.00 0.00 41.13 1.89
5029 5141 1.890876 TCTGCACAAGCCACGTAATT 58.109 45.000 0.00 0.00 41.13 1.40
5030 5142 1.535028 TCTGCACAAGCCACGTAATTG 59.465 47.619 0.00 0.00 41.13 2.32
5031 5143 0.039617 TGCACAAGCCACGTAATTGC 60.040 50.000 6.50 2.63 41.13 3.56
5032 5144 0.732538 GCACAAGCCACGTAATTGCC 60.733 55.000 6.50 0.00 33.58 4.52
5033 5145 0.595588 CACAAGCCACGTAATTGCCA 59.404 50.000 6.50 0.00 0.00 4.92
5034 5146 1.202114 CACAAGCCACGTAATTGCCAT 59.798 47.619 6.50 0.00 0.00 4.40
5035 5147 1.202114 ACAAGCCACGTAATTGCCATG 59.798 47.619 6.50 0.00 0.00 3.66
5036 5148 1.472082 CAAGCCACGTAATTGCCATGA 59.528 47.619 0.00 0.00 0.00 3.07
5037 5149 1.832883 AGCCACGTAATTGCCATGAA 58.167 45.000 0.00 0.00 0.00 2.57
5038 5150 2.166829 AGCCACGTAATTGCCATGAAA 58.833 42.857 0.00 0.00 0.00 2.69
5039 5151 2.760092 AGCCACGTAATTGCCATGAAAT 59.240 40.909 0.00 0.00 0.00 2.17
5040 5152 3.951037 AGCCACGTAATTGCCATGAAATA 59.049 39.130 0.00 0.00 0.00 1.40
5041 5153 4.584325 AGCCACGTAATTGCCATGAAATAT 59.416 37.500 0.00 0.00 0.00 1.28
5042 5154 4.681025 GCCACGTAATTGCCATGAAATATG 59.319 41.667 0.00 0.00 0.00 1.78
5043 5155 4.681025 CCACGTAATTGCCATGAAATATGC 59.319 41.667 0.00 0.00 0.00 3.14
5044 5156 5.280164 CACGTAATTGCCATGAAATATGCA 58.720 37.500 0.00 0.00 32.29 3.96
5045 5157 5.173673 CACGTAATTGCCATGAAATATGCAC 59.826 40.000 0.00 0.00 33.66 4.57
5046 5158 5.163571 ACGTAATTGCCATGAAATATGCACA 60.164 36.000 0.00 0.00 33.66 4.57
5047 5159 5.921976 CGTAATTGCCATGAAATATGCACAT 59.078 36.000 0.00 0.00 33.66 3.21
5048 5160 7.083230 CGTAATTGCCATGAAATATGCACATA 58.917 34.615 0.00 0.00 33.66 2.29
5049 5161 7.756272 CGTAATTGCCATGAAATATGCACATAT 59.244 33.333 0.00 0.00 33.66 1.78
5051 5163 8.991243 AATTGCCATGAAATATGCACATATAC 57.009 30.769 3.65 3.10 33.66 1.47
5052 5164 7.764141 TTGCCATGAAATATGCACATATACT 57.236 32.000 3.65 0.00 33.66 2.12
5053 5165 7.764141 TGCCATGAAATATGCACATATACTT 57.236 32.000 3.65 0.00 33.86 2.24
5054 5166 8.860780 TGCCATGAAATATGCACATATACTTA 57.139 30.769 3.65 0.00 33.86 2.24
5055 5167 8.949177 TGCCATGAAATATGCACATATACTTAG 58.051 33.333 3.65 0.00 33.86 2.18
5056 5168 8.400947 GCCATGAAATATGCACATATACTTAGG 58.599 37.037 3.65 5.60 33.86 2.69
5057 5169 9.453572 CCATGAAATATGCACATATACTTAGGT 57.546 33.333 3.65 0.00 33.86 3.08
5064 5176 6.677781 TGCACATATACTTAGGTTTTCAGC 57.322 37.500 0.00 0.00 0.00 4.26
5584 5699 4.080751 GGGTTAAGTGATAACAGCCAGGTA 60.081 45.833 1.32 0.00 44.77 3.08
5754 5869 1.605710 CCTGGCCGATTTGATAAGCTG 59.394 52.381 0.00 0.00 0.00 4.24
5755 5870 2.292267 CTGGCCGATTTGATAAGCTGT 58.708 47.619 0.00 0.00 0.00 4.40
5757 5872 2.423185 TGGCCGATTTGATAAGCTGTTG 59.577 45.455 0.00 0.00 0.00 3.33
5821 5936 5.162075 AGTCATCGGTAGTTCTTTCTTTCG 58.838 41.667 0.00 0.00 0.00 3.46
5911 6026 3.181479 ACAGACTCGCAAGTACAAACTCA 60.181 43.478 0.00 0.00 35.28 3.41
5988 6103 7.449395 ACTGGTGCTGATATTTATGCATTATGT 59.551 33.333 3.54 0.00 37.76 2.29
6069 6184 6.071447 TGCTGCCACATTATGTTTTTCATAGT 60.071 34.615 0.00 0.00 39.73 2.12
6087 6202 0.861837 GTTGTGCTCTGTCGGACTTG 59.138 55.000 9.88 2.77 0.00 3.16
6090 6205 0.671781 GTGCTCTGTCGGACTTGCAT 60.672 55.000 19.56 0.00 32.98 3.96
6121 6236 0.668535 AGGTCAAAACGCTTGAAGCC 59.331 50.000 12.13 0.00 38.18 4.35
6157 6272 2.811317 GACGCCGGTGCAGAAGAG 60.811 66.667 16.69 0.00 37.32 2.85
6256 6371 5.523916 CGGTCATATCTTGGGAGTTTAACTG 59.476 44.000 0.93 0.00 0.00 3.16
6263 6378 4.658901 TCTTGGGAGTTTAACTGGTTCTCT 59.341 41.667 0.93 0.00 0.00 3.10
6297 6412 4.535425 GGTGATATCTCGCCGTCG 57.465 61.111 3.98 0.00 41.99 5.12
6570 6685 0.948623 TTGACCTCGTGTTGGATGCG 60.949 55.000 0.00 0.00 0.00 4.73
6574 6689 2.434185 TCGTGTTGGATGCGCCTC 60.434 61.111 4.18 3.99 37.63 4.70
6635 6750 5.474876 AGCAGGGATGTAAAACTCTGAAAAG 59.525 40.000 0.00 0.00 0.00 2.27
6644 6759 7.970384 TGTAAAACTCTGAAAAGTACTGTGTG 58.030 34.615 0.00 0.00 0.00 3.82
6671 6810 5.238650 ACCGAATTTTGAGAAGTAGGTTGTG 59.761 40.000 0.00 0.00 0.00 3.33
6672 6811 5.147162 CGAATTTTGAGAAGTAGGTTGTGC 58.853 41.667 0.00 0.00 0.00 4.57
6677 6816 4.471904 TGAGAAGTAGGTTGTGCATAGG 57.528 45.455 0.00 0.00 0.00 2.57
6694 6833 5.583061 TGCATAGGTTAATAAAGTGTGACGG 59.417 40.000 0.00 0.00 0.00 4.79
6695 6834 5.503520 GCATAGGTTAATAAAGTGTGACGGC 60.504 44.000 0.00 0.00 0.00 5.68
6696 6835 4.010667 AGGTTAATAAAGTGTGACGGCA 57.989 40.909 0.00 0.00 0.00 5.69
6714 6853 7.376866 GTGACGGCATCATAAGTTCAATAAATG 59.623 37.037 0.00 0.00 40.28 2.32
6728 6867 8.216423 AGTTCAATAAATGCAGTCAGGATCTAT 58.784 33.333 0.00 0.00 0.00 1.98
6731 6870 7.443272 TCAATAAATGCAGTCAGGATCTATGTG 59.557 37.037 0.00 0.00 0.00 3.21
6984 7125 5.705905 GTCCTACTACTCAGTTTTGCCATTT 59.294 40.000 0.00 0.00 36.14 2.32
6995 7136 6.533367 TCAGTTTTGCCATTTGAAGTTACAAC 59.467 34.615 0.00 0.00 0.00 3.32
7000 7141 4.099266 TGCCATTTGAAGTTACAACTGCTT 59.901 37.500 1.87 0.00 39.66 3.91
7003 7144 6.699642 GCCATTTGAAGTTACAACTGCTTAAA 59.300 34.615 1.87 0.00 39.66 1.52
7004 7145 7.384932 GCCATTTGAAGTTACAACTGCTTAAAT 59.615 33.333 1.87 0.00 39.66 1.40
7005 7146 8.702438 CCATTTGAAGTTACAACTGCTTAAATG 58.298 33.333 13.84 13.84 39.66 2.32
7006 7147 9.462174 CATTTGAAGTTACAACTGCTTAAATGA 57.538 29.630 14.86 0.00 39.66 2.57
7007 7148 8.850454 TTTGAAGTTACAACTGCTTAAATGAC 57.150 30.769 1.87 0.00 39.66 3.06
7008 7149 7.561021 TGAAGTTACAACTGCTTAAATGACA 57.439 32.000 1.87 0.00 39.66 3.58
7009 7150 8.165239 TGAAGTTACAACTGCTTAAATGACAT 57.835 30.769 1.87 0.00 39.66 3.06
7010 7151 8.289618 TGAAGTTACAACTGCTTAAATGACATC 58.710 33.333 1.87 0.00 39.66 3.06
7011 7152 6.831769 AGTTACAACTGCTTAAATGACATCG 58.168 36.000 0.00 0.00 37.98 3.84
7012 7153 4.083581 ACAACTGCTTAAATGACATCGC 57.916 40.909 0.00 0.00 0.00 4.58
7013 7154 3.753272 ACAACTGCTTAAATGACATCGCT 59.247 39.130 0.00 0.00 0.00 4.93
7014 7155 4.142816 ACAACTGCTTAAATGACATCGCTC 60.143 41.667 0.00 0.00 0.00 5.03
7015 7156 2.939103 ACTGCTTAAATGACATCGCTCC 59.061 45.455 0.00 0.00 0.00 4.70
7016 7157 1.933181 TGCTTAAATGACATCGCTCCG 59.067 47.619 0.00 0.00 0.00 4.63
7017 7158 1.933853 GCTTAAATGACATCGCTCCGT 59.066 47.619 0.00 0.00 0.00 4.69
7018 7159 2.285834 GCTTAAATGACATCGCTCCGTG 60.286 50.000 0.00 0.00 0.00 4.94
7019 7160 2.951457 TAAATGACATCGCTCCGTGA 57.049 45.000 0.00 0.00 0.00 4.35
7020 7161 1.645034 AAATGACATCGCTCCGTGAG 58.355 50.000 0.00 0.00 0.00 3.51
7021 7162 0.817654 AATGACATCGCTCCGTGAGA 59.182 50.000 5.24 0.00 0.00 3.27
7022 7163 1.035923 ATGACATCGCTCCGTGAGAT 58.964 50.000 5.24 0.00 35.58 2.75
7024 7165 3.622756 CATCGCTCCGTGAGATGC 58.377 61.111 5.24 0.00 43.78 3.91
7025 7166 1.067084 CATCGCTCCGTGAGATGCT 59.933 57.895 5.24 0.00 43.78 3.79
7026 7167 0.529337 CATCGCTCCGTGAGATGCTT 60.529 55.000 5.24 0.00 43.78 3.91
7032 7173 3.198068 GCTCCGTGAGATGCTTAAATGA 58.802 45.455 5.24 0.00 0.00 2.57
7038 7179 4.521943 GTGAGATGCTTAAATGACATCGC 58.478 43.478 0.00 0.00 43.91 4.58
7041 7182 4.701765 AGATGCTTAAATGACATCGCTCT 58.298 39.130 0.00 0.00 43.91 4.09
7063 7204 5.706833 TCTGTGAGATGCTTGCTCAAAAATA 59.293 36.000 0.00 0.00 43.39 1.40
7065 7206 4.790140 GTGAGATGCTTGCTCAAAAATACG 59.210 41.667 0.00 0.00 43.39 3.06
7109 7250 6.458206 GCCATCGTTTCATTAGATGTTTGCTA 60.458 38.462 4.33 0.00 39.89 3.49
7139 7280 6.577103 TGCCTCTAGAGATTGTTATTGTCAG 58.423 40.000 21.76 0.09 0.00 3.51
7146 7287 9.388506 CTAGAGATTGTTATTGTCAGGTCAAAT 57.611 33.333 0.00 0.00 0.00 2.32
7170 7311 7.315247 TCCGTTGACCATTTTATATGACAAG 57.685 36.000 0.00 0.00 0.00 3.16
7186 7327 8.747538 ATATGACAAGAATACCCCTAAAACAC 57.252 34.615 0.00 0.00 0.00 3.32
7187 7328 5.942961 TGACAAGAATACCCCTAAAACACA 58.057 37.500 0.00 0.00 0.00 3.72
7188 7329 5.766174 TGACAAGAATACCCCTAAAACACAC 59.234 40.000 0.00 0.00 0.00 3.82
7189 7330 5.697067 ACAAGAATACCCCTAAAACACACA 58.303 37.500 0.00 0.00 0.00 3.72
7190 7331 6.311735 ACAAGAATACCCCTAAAACACACAT 58.688 36.000 0.00 0.00 0.00 3.21
7191 7332 7.463431 ACAAGAATACCCCTAAAACACACATA 58.537 34.615 0.00 0.00 0.00 2.29
7202 7343 4.488126 AAACACACATACACATGTCAGC 57.512 40.909 0.00 0.00 43.73 4.26
7207 7348 3.193263 CACATACACATGTCAGCTCTCC 58.807 50.000 0.00 0.00 43.73 3.71
7208 7349 2.159184 ACATACACATGTCAGCTCTCCG 60.159 50.000 0.00 0.00 41.75 4.63
7216 7357 2.723273 TGTCAGCTCTCCGTATCTCAA 58.277 47.619 0.00 0.00 0.00 3.02
7217 7358 3.291584 TGTCAGCTCTCCGTATCTCAAT 58.708 45.455 0.00 0.00 0.00 2.57
7219 7360 4.887655 TGTCAGCTCTCCGTATCTCAATAA 59.112 41.667 0.00 0.00 0.00 1.40
7221 7362 5.009210 GTCAGCTCTCCGTATCTCAATAAGT 59.991 44.000 0.00 0.00 0.00 2.24
7222 7363 5.009110 TCAGCTCTCCGTATCTCAATAAGTG 59.991 44.000 0.00 0.00 0.00 3.16
7223 7364 4.890581 AGCTCTCCGTATCTCAATAAGTGT 59.109 41.667 0.00 0.00 0.00 3.55
7224 7365 4.979197 GCTCTCCGTATCTCAATAAGTGTG 59.021 45.833 0.00 0.00 0.00 3.82
7227 7372 4.028131 TCCGTATCTCAATAAGTGTGGGT 58.972 43.478 0.00 0.00 0.00 4.51
7246 7391 2.028020 GGTCCCACTTGTCAGGAGTAAG 60.028 54.545 0.00 0.00 0.00 2.34
7252 7397 1.728971 CTTGTCAGGAGTAAGCAAGCG 59.271 52.381 0.00 0.00 31.72 4.68
7253 7398 0.037326 TGTCAGGAGTAAGCAAGCGG 60.037 55.000 0.00 0.00 0.00 5.52
7274 7419 9.797556 AAGCGGATAATTTTACAGGAAAATAAC 57.202 29.630 3.60 0.00 45.21 1.89
7289 7434 5.639082 GGAAAATAACAAAGCTGTTGGGATG 59.361 40.000 11.59 0.00 45.53 3.51
7292 7437 6.610075 AATAACAAAGCTGTTGGGATGAAT 57.390 33.333 11.59 0.00 45.53 2.57
7297 7442 1.358787 AGCTGTTGGGATGAATTGGGA 59.641 47.619 0.00 0.00 0.00 4.37
7304 7449 3.070543 TGGGATGAATTGGGACCCATAT 58.929 45.455 15.83 6.11 44.50 1.78
7343 7488 2.048603 GGGGAGCTGACATGTTGGC 61.049 63.158 13.72 13.72 0.00 4.52
7348 7493 0.251922 AGCTGACATGTTGGCCCATT 60.252 50.000 16.68 0.67 0.00 3.16
7358 7503 6.139671 ACATGTTGGCCCATTGGTATTTATA 58.860 36.000 0.00 0.00 0.00 0.98
7362 7507 6.266558 TGTTGGCCCATTGGTATTTATATCAC 59.733 38.462 0.00 0.00 0.00 3.06
7416 7561 4.022068 CAGTAATGGTGTTCAGTGGCATTT 60.022 41.667 0.00 0.00 0.00 2.32
7470 7615 5.776173 TTTTGAGCCGTTGAAATTCCTAA 57.224 34.783 0.00 0.00 0.00 2.69
7472 7617 5.560966 TTGAGCCGTTGAAATTCCTAATC 57.439 39.130 0.00 0.00 0.00 1.75
7474 7619 3.606687 AGCCGTTGAAATTCCTAATCGT 58.393 40.909 0.00 0.00 0.00 3.73
7491 7636 3.308438 TCGTAAAACTGAGTAGTGGGC 57.692 47.619 0.00 0.00 37.19 5.36
7498 7643 0.687354 CTGAGTAGTGGGCCACAACT 59.313 55.000 36.28 19.92 36.74 3.16
7499 7644 1.899814 CTGAGTAGTGGGCCACAACTA 59.100 52.381 36.28 18.83 36.74 2.24
7500 7645 2.301870 CTGAGTAGTGGGCCACAACTAA 59.698 50.000 36.28 18.43 36.74 2.24
7545 7690 7.322664 CCATTGTTTTAACATGCCTAATCACT 58.677 34.615 0.00 0.00 38.95 3.41
7548 7693 8.856153 TTGTTTTAACATGCCTAATCACTAGA 57.144 30.769 0.00 0.00 38.95 2.43
7550 7695 8.318412 TGTTTTAACATGCCTAATCACTAGAGA 58.682 33.333 0.00 0.00 33.17 3.10
7555 7700 8.814038 AACATGCCTAATCACTAGAGAAAAAT 57.186 30.769 0.00 0.00 0.00 1.82
7559 7704 7.509546 TGCCTAATCACTAGAGAAAAATAGGG 58.490 38.462 16.17 6.28 0.00 3.53
7560 7705 7.127339 TGCCTAATCACTAGAGAAAAATAGGGT 59.873 37.037 16.17 0.00 0.00 4.34
7561 7706 7.442666 GCCTAATCACTAGAGAAAAATAGGGTG 59.557 40.741 16.17 0.00 0.00 4.61
7563 7708 9.757227 CTAATCACTAGAGAAAAATAGGGTGAG 57.243 37.037 0.00 0.00 36.22 3.51
7575 7720 8.679344 AAAAATAGGGTGAGGGACAAAATAAT 57.321 30.769 0.00 0.00 0.00 1.28
7576 7721 9.777008 AAAAATAGGGTGAGGGACAAAATAATA 57.223 29.630 0.00 0.00 0.00 0.98
7578 7723 9.777008 AAATAGGGTGAGGGACAAAATAATAAA 57.223 29.630 0.00 0.00 0.00 1.40
7579 7724 9.777008 AATAGGGTGAGGGACAAAATAATAAAA 57.223 29.630 0.00 0.00 0.00 1.52
7627 7948 7.953005 TGAAAATGCATAGGGAGTTCAAATA 57.047 32.000 0.00 0.00 0.00 1.40
7630 7951 4.437682 TGCATAGGGAGTTCAAATAGGG 57.562 45.455 0.00 0.00 0.00 3.53
7648 7973 4.415224 AGGGGAGAGTTTACCTCAGTTA 57.585 45.455 0.00 0.00 43.12 2.24
7649 7974 4.095211 AGGGGAGAGTTTACCTCAGTTAC 58.905 47.826 0.00 0.00 43.12 2.50
7650 7975 4.095211 GGGGAGAGTTTACCTCAGTTACT 58.905 47.826 0.00 0.00 43.12 2.24
7655 7980 6.606395 GGAGAGTTTACCTCAGTTACTATGGA 59.394 42.308 9.24 0.00 43.12 3.41
7660 7985 3.693807 ACCTCAGTTACTATGGACGTGA 58.306 45.455 0.00 0.00 0.00 4.35
7661 7986 3.695060 ACCTCAGTTACTATGGACGTGAG 59.305 47.826 0.00 0.00 0.00 3.51
7668 7993 0.101399 CTATGGACGTGAGCGAGCTT 59.899 55.000 0.00 0.00 42.00 3.74
7672 7997 0.714439 GGACGTGAGCGAGCTTTTAC 59.286 55.000 0.00 0.00 42.00 2.01
7674 7999 0.032952 ACGTGAGCGAGCTTTTACCA 59.967 50.000 0.00 0.00 42.00 3.25
7678 8003 3.555956 CGTGAGCGAGCTTTTACCATTAT 59.444 43.478 0.00 0.00 41.33 1.28
7682 8007 3.560068 AGCGAGCTTTTACCATTATTCGG 59.440 43.478 0.00 0.00 0.00 4.30
7683 8008 3.848554 GCGAGCTTTTACCATTATTCGGC 60.849 47.826 0.00 0.00 0.00 5.54
7684 8009 3.311322 CGAGCTTTTACCATTATTCGGCA 59.689 43.478 0.00 0.00 0.00 5.69
7685 8010 4.201871 CGAGCTTTTACCATTATTCGGCAA 60.202 41.667 0.00 0.00 0.00 4.52
7686 8011 5.646606 GAGCTTTTACCATTATTCGGCAAA 58.353 37.500 0.00 0.00 0.00 3.68
7687 8012 6.220726 AGCTTTTACCATTATTCGGCAAAT 57.779 33.333 0.00 0.00 0.00 2.32
7688 8013 6.639563 AGCTTTTACCATTATTCGGCAAATT 58.360 32.000 0.00 0.00 0.00 1.82
7689 8014 7.102993 AGCTTTTACCATTATTCGGCAAATTT 58.897 30.769 0.00 0.00 0.00 1.82
7690 8015 7.064490 AGCTTTTACCATTATTCGGCAAATTTG 59.936 33.333 14.03 14.03 0.00 2.32
7691 8016 7.064016 GCTTTTACCATTATTCGGCAAATTTGA 59.936 33.333 22.31 0.76 0.00 2.69
7692 8017 7.820044 TTTACCATTATTCGGCAAATTTGAC 57.180 32.000 22.31 18.50 0.00 3.18
7693 8018 5.398603 ACCATTATTCGGCAAATTTGACA 57.601 34.783 23.49 5.65 35.35 3.58
7694 8019 5.788450 ACCATTATTCGGCAAATTTGACAA 58.212 33.333 23.49 16.08 35.35 3.18
7695 8020 6.405538 ACCATTATTCGGCAAATTTGACAAT 58.594 32.000 23.49 20.84 35.35 2.71
7696 8021 6.878389 ACCATTATTCGGCAAATTTGACAATT 59.122 30.769 23.49 9.46 35.35 2.32
7697 8022 7.390162 ACCATTATTCGGCAAATTTGACAATTT 59.610 29.630 23.49 7.76 42.37 1.82
7698 8023 8.235905 CCATTATTCGGCAAATTTGACAATTTT 58.764 29.630 23.49 9.98 40.09 1.82
7699 8024 9.053135 CATTATTCGGCAAATTTGACAATTTTG 57.947 29.630 23.49 22.48 40.09 2.44
7700 8025 6.857777 ATTCGGCAAATTTGACAATTTTGA 57.142 29.167 27.56 8.73 40.09 2.69
7701 8026 5.649602 TCGGCAAATTTGACAATTTTGAC 57.350 34.783 27.56 25.28 40.09 3.18
7702 8027 4.509600 TCGGCAAATTTGACAATTTTGACC 59.490 37.500 27.56 24.76 40.09 4.02
7703 8028 4.511082 CGGCAAATTTGACAATTTTGACCT 59.489 37.500 27.56 0.56 40.09 3.85
7704 8029 5.558653 CGGCAAATTTGACAATTTTGACCTG 60.559 40.000 27.56 20.36 40.09 4.00
7705 8030 5.296531 GGCAAATTTGACAATTTTGACCTGT 59.703 36.000 27.56 0.00 40.09 4.00
7706 8031 6.193761 GCAAATTTGACAATTTTGACCTGTG 58.806 36.000 27.56 10.22 40.09 3.66
7707 8032 6.717413 CAAATTTGACAATTTTGACCTGTGG 58.283 36.000 22.40 2.00 40.09 4.17
7708 8033 5.867903 ATTTGACAATTTTGACCTGTGGA 57.132 34.783 0.00 0.00 0.00 4.02
7709 8034 4.647424 TTGACAATTTTGACCTGTGGAC 57.353 40.909 0.00 0.00 0.00 4.02
7710 8035 2.616376 TGACAATTTTGACCTGTGGACG 59.384 45.455 0.00 0.00 0.00 4.79
7711 8036 2.875933 GACAATTTTGACCTGTGGACGA 59.124 45.455 0.00 0.00 0.00 4.20
7712 8037 3.283751 ACAATTTTGACCTGTGGACGAA 58.716 40.909 0.00 0.00 0.00 3.85
7713 8038 3.697045 ACAATTTTGACCTGTGGACGAAA 59.303 39.130 0.00 4.51 35.83 3.46
7714 8039 4.340950 ACAATTTTGACCTGTGGACGAAAT 59.659 37.500 7.94 7.94 40.96 2.17
7715 8040 4.766404 ATTTTGACCTGTGGACGAAATC 57.234 40.909 7.94 0.00 37.02 2.17
7716 8041 2.920724 TTGACCTGTGGACGAAATCA 57.079 45.000 0.00 0.00 0.00 2.57
7717 8042 2.920724 TGACCTGTGGACGAAATCAA 57.079 45.000 0.00 0.00 0.00 2.57
7718 8043 3.417069 TGACCTGTGGACGAAATCAAT 57.583 42.857 0.00 0.00 0.00 2.57
7719 8044 3.750371 TGACCTGTGGACGAAATCAATT 58.250 40.909 0.00 0.00 0.00 2.32
7720 8045 3.751175 TGACCTGTGGACGAAATCAATTC 59.249 43.478 0.00 0.00 34.52 2.17
7721 8046 3.750371 ACCTGTGGACGAAATCAATTCA 58.250 40.909 0.00 0.00 37.96 2.57
7722 8047 3.502211 ACCTGTGGACGAAATCAATTCAC 59.498 43.478 0.00 0.00 37.96 3.18
7723 8048 3.501828 CCTGTGGACGAAATCAATTCACA 59.498 43.478 0.00 0.00 37.96 3.58
7724 8049 4.378770 CCTGTGGACGAAATCAATTCACAG 60.379 45.833 12.88 12.88 45.71 3.66
7725 8050 4.384940 TGTGGACGAAATCAATTCACAGA 58.615 39.130 0.00 0.00 37.96 3.41
7726 8051 4.819088 TGTGGACGAAATCAATTCACAGAA 59.181 37.500 0.00 0.00 37.96 3.02
7727 8052 5.473162 TGTGGACGAAATCAATTCACAGAAT 59.527 36.000 0.00 0.00 37.96 2.40
7728 8053 5.796935 GTGGACGAAATCAATTCACAGAATG 59.203 40.000 0.00 0.00 37.96 2.67
7729 8054 5.704978 TGGACGAAATCAATTCACAGAATGA 59.295 36.000 0.00 0.00 36.47 2.57
7737 8062 1.522668 TTCACAGAATGAACTGCCCG 58.477 50.000 0.00 0.00 42.62 6.13
7738 8063 0.396435 TCACAGAATGAACTGCCCGT 59.604 50.000 0.00 0.00 39.69 5.28
7739 8064 0.518636 CACAGAATGAACTGCCCGTG 59.481 55.000 0.00 0.00 39.69 4.94
7740 8065 0.396435 ACAGAATGAACTGCCCGTGA 59.604 50.000 0.00 0.00 39.69 4.35
7741 8066 1.202758 ACAGAATGAACTGCCCGTGAA 60.203 47.619 0.00 0.00 39.69 3.18
7742 8067 1.879380 CAGAATGAACTGCCCGTGAAA 59.121 47.619 0.00 0.00 39.69 2.69
7743 8068 1.880027 AGAATGAACTGCCCGTGAAAC 59.120 47.619 0.00 0.00 0.00 2.78
7744 8069 1.880027 GAATGAACTGCCCGTGAAACT 59.120 47.619 0.00 0.00 31.75 2.66
7745 8070 2.851263 ATGAACTGCCCGTGAAACTA 57.149 45.000 0.00 0.00 31.75 2.24
7746 8071 2.851263 TGAACTGCCCGTGAAACTAT 57.149 45.000 0.00 0.00 31.75 2.12
7747 8072 3.134574 TGAACTGCCCGTGAAACTATT 57.865 42.857 0.00 0.00 31.75 1.73
7748 8073 3.482436 TGAACTGCCCGTGAAACTATTT 58.518 40.909 0.00 0.00 31.75 1.40
7749 8074 3.500680 TGAACTGCCCGTGAAACTATTTC 59.499 43.478 0.00 0.00 40.08 2.17
7750 8075 3.134574 ACTGCCCGTGAAACTATTTCA 57.865 42.857 0.00 0.00 46.68 2.69
7759 8084 3.591023 TGAAACTATTTCACGCCGATGA 58.409 40.909 0.00 0.00 44.21 2.92
7760 8085 3.369756 TGAAACTATTTCACGCCGATGAC 59.630 43.478 0.00 0.00 44.21 3.06
7761 8086 1.935933 ACTATTTCACGCCGATGACC 58.064 50.000 0.00 0.00 0.00 4.02
7762 8087 1.480954 ACTATTTCACGCCGATGACCT 59.519 47.619 0.00 0.00 0.00 3.85
7763 8088 2.093658 ACTATTTCACGCCGATGACCTT 60.094 45.455 0.00 0.00 0.00 3.50
7764 8089 1.821216 ATTTCACGCCGATGACCTTT 58.179 45.000 0.00 0.00 0.00 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 41 8.525290 TCTTTCAAGAAAAGGAAAGTGAGATT 57.475 30.769 12.28 0.00 46.29 2.40
50 52 9.631452 GGAAATAATGTCTCTTTCAAGAAAAGG 57.369 33.333 0.00 0.00 43.88 3.11
162 170 3.670055 CCGTGAATGTTTTCAAGATGCAC 59.330 43.478 0.00 0.00 43.29 4.57
263 274 8.395633 GTTAGGTGTAACAATTCCATGACATAC 58.604 37.037 0.00 0.00 39.98 2.39
267 278 8.038944 TCTAGTTAGGTGTAACAATTCCATGAC 58.961 37.037 0.00 0.00 41.06 3.06
282 293 9.436957 AATGTGACACTTAATTCTAGTTAGGTG 57.563 33.333 7.20 11.53 43.36 4.00
331 351 3.508840 CCGCCCGTGGATGCTTTC 61.509 66.667 0.00 0.00 0.00 2.62
361 381 5.899547 ACCATCTAATGTCTGACCTATGACA 59.100 40.000 5.17 0.00 45.56 3.58
443 463 5.856126 TGTCAATTTTCCTCGTGTGTATC 57.144 39.130 0.00 0.00 0.00 2.24
493 545 2.094597 TCGTACGAGTACCCATGTTTGG 60.095 50.000 15.28 0.00 43.23 3.28
501 553 0.678048 AGGTGGTCGTACGAGTACCC 60.678 60.000 31.64 24.09 34.02 3.69
545 599 2.227388 CCTTTGAATCCATATGCTCCGC 59.773 50.000 0.00 0.00 0.00 5.54
546 600 3.743521 TCCTTTGAATCCATATGCTCCG 58.256 45.455 0.00 0.00 0.00 4.63
734 788 4.077108 ACATAGAGTGCCGACGGATATAA 58.923 43.478 20.50 0.00 0.00 0.98
749 803 6.372659 ACACTGCCAAAATGTCTTACATAGAG 59.627 38.462 0.00 0.00 37.97 2.43
753 807 5.106712 CGTACACTGCCAAAATGTCTTACAT 60.107 40.000 0.00 0.00 41.31 2.29
755 825 4.378046 CCGTACACTGCCAAAATGTCTTAC 60.378 45.833 0.00 0.00 0.00 2.34
762 832 1.153353 CGTCCGTACACTGCCAAAAT 58.847 50.000 0.00 0.00 0.00 1.82
772 842 2.836262 ACCAAATCAAACGTCCGTACA 58.164 42.857 0.00 0.00 0.00 2.90
773 843 3.248125 TCAACCAAATCAAACGTCCGTAC 59.752 43.478 0.00 0.00 0.00 3.67
774 844 3.464907 TCAACCAAATCAAACGTCCGTA 58.535 40.909 0.00 0.00 0.00 4.02
775 845 2.289547 CTCAACCAAATCAAACGTCCGT 59.710 45.455 0.00 0.00 0.00 4.69
776 846 2.289547 ACTCAACCAAATCAAACGTCCG 59.710 45.455 0.00 0.00 0.00 4.79
777 847 3.314080 TCACTCAACCAAATCAAACGTCC 59.686 43.478 0.00 0.00 0.00 4.79
1293 1370 0.178964 CATCCAACCAACACCCCAGT 60.179 55.000 0.00 0.00 0.00 4.00
1295 1372 1.154921 CCATCCAACCAACACCCCA 59.845 57.895 0.00 0.00 0.00 4.96
1303 1384 3.585428 AACCCGGCCATCCAACCA 61.585 61.111 2.24 0.00 0.00 3.67
1319 1400 1.557832 CCTAAGTGATCGAACCCCCAA 59.442 52.381 0.00 0.00 0.00 4.12
1321 1402 0.468648 CCCTAAGTGATCGAACCCCC 59.531 60.000 0.00 0.00 0.00 5.40
1337 1418 3.081804 GACGTTTCACAATTCATCCCCT 58.918 45.455 0.00 0.00 0.00 4.79
1356 1437 0.615331 TCATCCTCCAAGCACCAGAC 59.385 55.000 0.00 0.00 0.00 3.51
1368 1449 3.868077 CGAGACCAAATTCACTCATCCTC 59.132 47.826 0.00 0.00 0.00 3.71
1373 1454 3.320826 TCTGACGAGACCAAATTCACTCA 59.679 43.478 0.00 0.00 0.00 3.41
1393 1474 0.405585 CATGACCACCCCCAAAGTCT 59.594 55.000 0.00 0.00 0.00 3.24
1394 1475 1.250840 GCATGACCACCCCCAAAGTC 61.251 60.000 0.00 0.00 0.00 3.01
1395 1476 1.228862 GCATGACCACCCCCAAAGT 60.229 57.895 0.00 0.00 0.00 2.66
1396 1477 1.077265 AGCATGACCACCCCCAAAG 59.923 57.895 0.00 0.00 0.00 2.77
1398 1479 2.440147 CAGCATGACCACCCCCAA 59.560 61.111 0.00 0.00 39.69 4.12
1399 1480 4.365111 GCAGCATGACCACCCCCA 62.365 66.667 0.00 0.00 39.69 4.96
1400 1481 3.667217 ATGCAGCATGACCACCCCC 62.667 63.158 7.23 0.00 39.69 5.40
1401 1482 2.043652 ATGCAGCATGACCACCCC 60.044 61.111 7.23 0.00 39.69 4.95
1452 1533 9.263446 ACCCAGTTCATCTACAGTTATTAACTA 57.737 33.333 8.71 0.00 40.46 2.24
1454 1535 7.280205 CCACCCAGTTCATCTACAGTTATTAAC 59.720 40.741 0.00 0.00 0.00 2.01
1462 1551 1.740380 CGCCACCCAGTTCATCTACAG 60.740 57.143 0.00 0.00 0.00 2.74
1494 1583 3.825014 ACTACAGCTCGGTCAGACTAAAA 59.175 43.478 0.00 0.00 0.00 1.52
1506 1595 5.239744 AGTGAATACCTATGACTACAGCTCG 59.760 44.000 0.00 0.00 0.00 5.03
1626 1725 9.383519 GAAGATAGTCATGTCTACCAATTTGAA 57.616 33.333 1.61 0.00 0.00 2.69
1642 1741 8.807118 ACATTTAGTCTCAACAGAAGATAGTCA 58.193 33.333 0.00 0.00 0.00 3.41
1668 1767 7.375890 ACTTATATTTAGGAACCCAGGGAGTA 58.624 38.462 14.54 0.00 0.00 2.59
1669 1768 6.218053 ACTTATATTTAGGAACCCAGGGAGT 58.782 40.000 14.54 0.00 0.00 3.85
1670 1769 6.559157 AGACTTATATTTAGGAACCCAGGGAG 59.441 42.308 14.54 0.00 0.00 4.30
1671 1770 6.458784 AGACTTATATTTAGGAACCCAGGGA 58.541 40.000 14.54 0.00 0.00 4.20
1672 1771 6.765355 AGACTTATATTTAGGAACCCAGGG 57.235 41.667 2.85 2.85 0.00 4.45
1673 1772 9.121658 GAAAAGACTTATATTTAGGAACCCAGG 57.878 37.037 0.00 0.00 0.00 4.45
1674 1773 9.681062 TGAAAAGACTTATATTTAGGAACCCAG 57.319 33.333 0.00 0.00 0.00 4.45
1675 1774 9.681062 CTGAAAAGACTTATATTTAGGAACCCA 57.319 33.333 0.00 0.00 0.00 4.51
1676 1775 9.901172 TCTGAAAAGACTTATATTTAGGAACCC 57.099 33.333 0.00 0.00 0.00 4.11
1688 1787 8.816894 TGTAGTGGAATCTCTGAAAAGACTTAT 58.183 33.333 0.00 0.00 0.00 1.73
1689 1788 8.190326 TGTAGTGGAATCTCTGAAAAGACTTA 57.810 34.615 0.00 0.00 0.00 2.24
1690 1789 7.067496 TGTAGTGGAATCTCTGAAAAGACTT 57.933 36.000 0.00 0.00 0.00 3.01
1691 1790 6.672266 TGTAGTGGAATCTCTGAAAAGACT 57.328 37.500 0.00 0.00 0.00 3.24
1692 1791 7.442666 AGTTTGTAGTGGAATCTCTGAAAAGAC 59.557 37.037 0.00 0.00 0.00 3.01
1693 1792 7.509546 AGTTTGTAGTGGAATCTCTGAAAAGA 58.490 34.615 0.00 0.00 0.00 2.52
1694 1793 7.736447 AGTTTGTAGTGGAATCTCTGAAAAG 57.264 36.000 0.00 0.00 0.00 2.27
1695 1794 8.208224 TGTAGTTTGTAGTGGAATCTCTGAAAA 58.792 33.333 0.00 0.00 0.00 2.29
1696 1795 7.732025 TGTAGTTTGTAGTGGAATCTCTGAAA 58.268 34.615 0.00 0.00 0.00 2.69
1697 1796 7.297936 TGTAGTTTGTAGTGGAATCTCTGAA 57.702 36.000 0.00 0.00 0.00 3.02
1698 1797 6.911250 TGTAGTTTGTAGTGGAATCTCTGA 57.089 37.500 0.00 0.00 0.00 3.27
1699 1798 7.432545 CGTATGTAGTTTGTAGTGGAATCTCTG 59.567 40.741 0.00 0.00 0.00 3.35
1700 1799 7.416438 CCGTATGTAGTTTGTAGTGGAATCTCT 60.416 40.741 0.00 0.00 0.00 3.10
1701 1800 6.696148 CCGTATGTAGTTTGTAGTGGAATCTC 59.304 42.308 0.00 0.00 0.00 2.75
1702 1801 6.379133 TCCGTATGTAGTTTGTAGTGGAATCT 59.621 38.462 0.00 0.00 0.00 2.40
1703 1802 6.567050 TCCGTATGTAGTTTGTAGTGGAATC 58.433 40.000 0.00 0.00 0.00 2.52
1704 1803 6.534475 TCCGTATGTAGTTTGTAGTGGAAT 57.466 37.500 0.00 0.00 0.00 3.01
1705 1804 5.981088 TCCGTATGTAGTTTGTAGTGGAA 57.019 39.130 0.00 0.00 0.00 3.53
1706 1805 5.419788 ACATCCGTATGTAGTTTGTAGTGGA 59.580 40.000 0.00 0.00 44.66 4.02
1707 1806 5.657474 ACATCCGTATGTAGTTTGTAGTGG 58.343 41.667 0.00 0.00 44.66 4.00
1749 1848 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
1750 1849 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
1751 1850 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1752 1851 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1753 1852 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1754 1853 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1755 1854 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1756 1855 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1757 1856 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1758 1857 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1759 1858 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1760 1859 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
1761 1860 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
1762 1861 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
1763 1862 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
1764 1863 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
1765 1864 4.530710 AAGTGACTACATACGGAGCAAA 57.469 40.909 0.00 0.00 0.00 3.68
1766 1865 5.847111 ATAAGTGACTACATACGGAGCAA 57.153 39.130 0.00 0.00 0.00 3.91
1767 1866 5.358725 TCAATAAGTGACTACATACGGAGCA 59.641 40.000 0.00 0.00 0.00 4.26
1768 1867 5.828747 TCAATAAGTGACTACATACGGAGC 58.171 41.667 0.00 0.00 0.00 4.70
1769 1868 8.873215 ATTTCAATAAGTGACTACATACGGAG 57.127 34.615 0.00 0.00 35.39 4.63
1770 1869 8.692710 AGATTTCAATAAGTGACTACATACGGA 58.307 33.333 0.00 0.00 35.39 4.69
1771 1870 8.873215 AGATTTCAATAAGTGACTACATACGG 57.127 34.615 0.00 0.00 35.39 4.02
1772 1871 9.737427 AGAGATTTCAATAAGTGACTACATACG 57.263 33.333 0.00 0.00 35.39 3.06
1813 1912 9.131791 GCTGTTTAATATTTCCTCCATTCCTAA 57.868 33.333 0.00 0.00 0.00 2.69
1814 1913 8.502738 AGCTGTTTAATATTTCCTCCATTCCTA 58.497 33.333 0.00 0.00 0.00 2.94
1815 1914 7.357471 AGCTGTTTAATATTTCCTCCATTCCT 58.643 34.615 0.00 0.00 0.00 3.36
1816 1915 7.588497 AGCTGTTTAATATTTCCTCCATTCC 57.412 36.000 0.00 0.00 0.00 3.01
1828 1927 9.799106 ACCTGCAGATTAATAGCTGTTTAATAT 57.201 29.630 17.39 9.58 39.95 1.28
1842 1941 1.838112 CCCAAGCACCTGCAGATTAA 58.162 50.000 17.39 0.00 45.16 1.40
1999 2099 1.467734 CTTCACAAGCACCTGCAGATC 59.532 52.381 17.39 3.35 45.16 2.75
2082 2182 1.412343 GGATGCTCTCTCTTGGACTCC 59.588 57.143 0.00 0.00 0.00 3.85
2112 2212 1.783250 AAGAGGTTGAGGCCACAGGG 61.783 60.000 5.01 0.00 37.18 4.45
2178 2278 1.300080 CAAGGGTGCAAAGCCGTTG 60.300 57.895 11.45 11.45 42.76 4.10
2664 2764 6.064060 ACATGTCTGAATGAAGAAAAGTGGA 58.936 36.000 0.00 0.00 0.00 4.02
3127 3227 2.362889 CCACATCCTGCAACCCCC 60.363 66.667 0.00 0.00 0.00 5.40
3725 3827 1.009829 CGGAGCTTACACATTCAGGC 58.990 55.000 0.00 0.00 0.00 4.85
3860 3962 6.375174 CACCATGGAGTGTTTCAGATATCAAA 59.625 38.462 21.47 0.00 32.89 2.69
4537 4642 5.136828 TCAAACCAAATGAACCAGCTTCTA 58.863 37.500 0.00 0.00 0.00 2.10
4703 4809 8.278408 GGAATGAAAACTCAATTCAAGAAAAGC 58.722 33.333 0.00 0.00 39.98 3.51
4769 4876 3.944015 AGAAAACATCCTAGTGAGCATGC 59.056 43.478 10.51 10.51 0.00 4.06
4992 5104 6.154445 GTGCAGATGAAATTGACAGTGAAAT 58.846 36.000 0.00 0.00 0.00 2.17
4993 5105 5.067544 TGTGCAGATGAAATTGACAGTGAAA 59.932 36.000 0.00 0.00 0.00 2.69
4994 5106 4.579753 TGTGCAGATGAAATTGACAGTGAA 59.420 37.500 0.00 0.00 0.00 3.18
4995 5107 4.136051 TGTGCAGATGAAATTGACAGTGA 58.864 39.130 0.00 0.00 0.00 3.41
4996 5108 4.492791 TGTGCAGATGAAATTGACAGTG 57.507 40.909 0.00 0.00 0.00 3.66
4997 5109 4.558095 GCTTGTGCAGATGAAATTGACAGT 60.558 41.667 0.43 0.00 39.41 3.55
4998 5110 3.918591 GCTTGTGCAGATGAAATTGACAG 59.081 43.478 0.43 0.00 39.41 3.51
4999 5111 3.305539 GGCTTGTGCAGATGAAATTGACA 60.306 43.478 0.43 0.00 41.91 3.58
5000 5112 3.248266 GGCTTGTGCAGATGAAATTGAC 58.752 45.455 0.43 0.00 41.91 3.18
5001 5113 2.892215 TGGCTTGTGCAGATGAAATTGA 59.108 40.909 0.43 0.00 41.91 2.57
5002 5114 2.991190 GTGGCTTGTGCAGATGAAATTG 59.009 45.455 0.43 0.00 41.91 2.32
5003 5115 2.352030 CGTGGCTTGTGCAGATGAAATT 60.352 45.455 0.43 0.00 41.91 1.82
5004 5116 1.200716 CGTGGCTTGTGCAGATGAAAT 59.799 47.619 0.43 0.00 41.91 2.17
5005 5117 0.592637 CGTGGCTTGTGCAGATGAAA 59.407 50.000 0.43 0.00 41.91 2.69
5006 5118 0.534877 ACGTGGCTTGTGCAGATGAA 60.535 50.000 0.43 0.00 41.91 2.57
5007 5119 0.320050 TACGTGGCTTGTGCAGATGA 59.680 50.000 0.00 0.00 41.91 2.92
5008 5120 1.155889 TTACGTGGCTTGTGCAGATG 58.844 50.000 0.00 0.00 41.91 2.90
5009 5121 2.113860 ATTACGTGGCTTGTGCAGAT 57.886 45.000 0.00 0.00 41.91 2.90
5010 5122 1.535028 CAATTACGTGGCTTGTGCAGA 59.465 47.619 0.00 0.00 41.91 4.26
5011 5123 1.967762 CAATTACGTGGCTTGTGCAG 58.032 50.000 0.00 0.00 41.91 4.41
5012 5124 0.039617 GCAATTACGTGGCTTGTGCA 60.040 50.000 0.00 0.00 41.91 4.57
5013 5125 0.732538 GGCAATTACGTGGCTTGTGC 60.733 55.000 0.00 0.00 40.77 4.57
5014 5126 0.595588 TGGCAATTACGTGGCTTGTG 59.404 50.000 0.00 0.00 44.15 3.33
5015 5127 1.202114 CATGGCAATTACGTGGCTTGT 59.798 47.619 0.00 0.00 44.15 3.16
5016 5128 1.472082 TCATGGCAATTACGTGGCTTG 59.528 47.619 0.00 2.49 45.27 4.01
5017 5129 1.832883 TCATGGCAATTACGTGGCTT 58.167 45.000 0.00 0.00 44.15 4.35
5018 5130 1.832883 TTCATGGCAATTACGTGGCT 58.167 45.000 0.00 0.00 44.15 4.75
5019 5131 2.645730 TTTCATGGCAATTACGTGGC 57.354 45.000 0.00 0.00 44.09 5.01
5020 5132 4.681025 GCATATTTCATGGCAATTACGTGG 59.319 41.667 0.00 0.00 0.00 4.94
5021 5133 5.173673 GTGCATATTTCATGGCAATTACGTG 59.826 40.000 0.00 0.00 38.10 4.49
5022 5134 5.163571 TGTGCATATTTCATGGCAATTACGT 60.164 36.000 0.00 0.00 38.10 3.57
5023 5135 5.280164 TGTGCATATTTCATGGCAATTACG 58.720 37.500 0.00 0.00 38.10 3.18
5024 5136 8.991243 ATATGTGCATATTTCATGGCAATTAC 57.009 30.769 0.00 0.00 38.10 1.89
5026 5138 8.809066 AGTATATGTGCATATTTCATGGCAATT 58.191 29.630 0.00 0.00 38.10 2.32
5027 5139 8.357290 AGTATATGTGCATATTTCATGGCAAT 57.643 30.769 0.00 0.00 38.10 3.56
5028 5140 7.764141 AGTATATGTGCATATTTCATGGCAA 57.236 32.000 0.00 0.00 38.10 4.52
5029 5141 7.764141 AAGTATATGTGCATATTTCATGGCA 57.236 32.000 0.00 0.00 35.71 4.92
5030 5142 8.400947 CCTAAGTATATGTGCATATTTCATGGC 58.599 37.037 0.00 0.00 35.71 4.40
5031 5143 9.453572 ACCTAAGTATATGTGCATATTTCATGG 57.546 33.333 0.00 9.51 35.71 3.66
5038 5150 9.003658 GCTGAAAACCTAAGTATATGTGCATAT 57.996 33.333 0.31 0.31 37.69 1.78
5039 5151 8.210946 AGCTGAAAACCTAAGTATATGTGCATA 58.789 33.333 0.00 0.00 0.00 3.14
5040 5152 7.056635 AGCTGAAAACCTAAGTATATGTGCAT 58.943 34.615 0.00 0.00 0.00 3.96
5041 5153 6.414732 AGCTGAAAACCTAAGTATATGTGCA 58.585 36.000 0.00 0.00 0.00 4.57
5042 5154 6.927294 AGCTGAAAACCTAAGTATATGTGC 57.073 37.500 0.00 0.00 0.00 4.57
5043 5155 9.774742 GAAAAGCTGAAAACCTAAGTATATGTG 57.225 33.333 0.00 0.00 0.00 3.21
5044 5156 9.515226 TGAAAAGCTGAAAACCTAAGTATATGT 57.485 29.630 0.00 0.00 0.00 2.29
5045 5157 9.774742 GTGAAAAGCTGAAAACCTAAGTATATG 57.225 33.333 0.00 0.00 0.00 1.78
5046 5158 9.740710 AGTGAAAAGCTGAAAACCTAAGTATAT 57.259 29.630 0.00 0.00 0.00 0.86
5047 5159 8.999431 CAGTGAAAAGCTGAAAACCTAAGTATA 58.001 33.333 0.00 0.00 36.12 1.47
5048 5160 7.502561 ACAGTGAAAAGCTGAAAACCTAAGTAT 59.497 33.333 0.00 0.00 37.40 2.12
5049 5161 6.826741 ACAGTGAAAAGCTGAAAACCTAAGTA 59.173 34.615 0.00 0.00 37.40 2.24
5050 5162 5.652452 ACAGTGAAAAGCTGAAAACCTAAGT 59.348 36.000 0.00 0.00 37.40 2.24
5051 5163 6.136541 ACAGTGAAAAGCTGAAAACCTAAG 57.863 37.500 0.00 0.00 37.40 2.18
5052 5164 5.650266 TGACAGTGAAAAGCTGAAAACCTAA 59.350 36.000 0.00 0.00 37.40 2.69
5053 5165 5.189928 TGACAGTGAAAAGCTGAAAACCTA 58.810 37.500 0.00 0.00 37.40 3.08
5054 5166 4.016444 TGACAGTGAAAAGCTGAAAACCT 58.984 39.130 0.00 0.00 37.40 3.50
5055 5167 4.370364 TGACAGTGAAAAGCTGAAAACC 57.630 40.909 0.00 0.00 37.40 3.27
5056 5168 6.892310 AATTGACAGTGAAAAGCTGAAAAC 57.108 33.333 0.00 0.00 37.40 2.43
5057 5169 7.095910 TGAAATTGACAGTGAAAAGCTGAAAA 58.904 30.769 0.00 0.00 37.40 2.29
5058 5170 6.629128 TGAAATTGACAGTGAAAAGCTGAAA 58.371 32.000 0.00 0.00 37.40 2.69
5059 5171 6.206395 TGAAATTGACAGTGAAAAGCTGAA 57.794 33.333 0.00 0.00 37.40 3.02
5060 5172 5.221106 CCTGAAATTGACAGTGAAAAGCTGA 60.221 40.000 0.00 0.00 37.40 4.26
5061 5173 4.980434 CCTGAAATTGACAGTGAAAAGCTG 59.020 41.667 0.00 0.00 39.67 4.24
5062 5174 4.500375 GCCTGAAATTGACAGTGAAAAGCT 60.500 41.667 0.00 0.00 34.04 3.74
5063 5175 3.737774 GCCTGAAATTGACAGTGAAAAGC 59.262 43.478 0.00 4.11 34.04 3.51
5064 5176 5.192327 AGCCTGAAATTGACAGTGAAAAG 57.808 39.130 0.00 0.00 34.04 2.27
5584 5699 6.365970 AGGCATATCGTAGATGAGGAAATT 57.634 37.500 0.00 0.00 45.12 1.82
5706 5821 2.693069 AGTGCAGAATCAAGAAGGTCG 58.307 47.619 0.00 0.00 0.00 4.79
5754 5869 7.749126 GCTTCAGTATTTACACCAATGTACAAC 59.251 37.037 0.00 0.00 41.12 3.32
5755 5870 7.445707 TGCTTCAGTATTTACACCAATGTACAA 59.554 33.333 0.00 0.00 41.12 2.41
5757 5872 7.372451 TGCTTCAGTATTTACACCAATGTAC 57.628 36.000 0.00 0.00 41.12 2.90
5821 5936 2.724174 CGAAACGAACCTGAAATTTGGC 59.276 45.455 0.00 0.00 0.00 4.52
6069 6184 0.880278 GCAAGTCCGACAGAGCACAA 60.880 55.000 0.40 0.00 0.00 3.33
6087 6202 6.593072 GTTTTGACCTTCAAATAAAGCATGC 58.407 36.000 10.51 10.51 44.75 4.06
6090 6205 4.742659 GCGTTTTGACCTTCAAATAAAGCA 59.257 37.500 2.31 0.00 44.75 3.91
6157 6272 3.577649 TCTTCAGTCTCGACAATGACC 57.422 47.619 0.00 0.00 34.02 4.02
6244 6359 8.098912 TGTAATAAGAGAACCAGTTAAACTCCC 58.901 37.037 0.00 0.00 0.00 4.30
6256 6371 5.411669 CCAACACCTGTGTAATAAGAGAACC 59.588 44.000 2.92 0.00 44.13 3.62
6263 6378 4.708576 TCACCCAACACCTGTGTAATAA 57.291 40.909 2.92 0.00 44.13 1.40
6297 6412 2.229792 TGCAACTCCTCCATTGACAAC 58.770 47.619 0.00 0.00 0.00 3.32
6570 6685 4.079253 TGACAAATTCTTAACTGGGAGGC 58.921 43.478 0.00 0.00 0.00 4.70
6574 6689 8.143835 AGAAAACATGACAAATTCTTAACTGGG 58.856 33.333 0.00 0.00 0.00 4.45
6635 6750 6.201425 TCTCAAAATTCGGTTACACACAGTAC 59.799 38.462 0.00 0.00 30.91 2.73
6644 6759 7.041576 ACAACCTACTTCTCAAAATTCGGTTAC 60.042 37.037 0.00 0.00 31.59 2.50
6671 6810 5.503520 GCCGTCACACTTTATTAACCTATGC 60.504 44.000 0.00 0.00 0.00 3.14
6672 6811 5.583061 TGCCGTCACACTTTATTAACCTATG 59.417 40.000 0.00 0.00 0.00 2.23
6677 6816 5.539582 TGATGCCGTCACACTTTATTAAC 57.460 39.130 0.00 0.00 0.00 2.01
6694 6833 7.916977 TGACTGCATTTATTGAACTTATGATGC 59.083 33.333 0.00 0.00 39.15 3.91
6695 6834 9.447040 CTGACTGCATTTATTGAACTTATGATG 57.553 33.333 0.00 0.00 0.00 3.07
6696 6835 8.627403 CCTGACTGCATTTATTGAACTTATGAT 58.373 33.333 0.00 0.00 0.00 2.45
6714 6853 4.399004 AGTTCACATAGATCCTGACTGC 57.601 45.455 0.16 0.00 0.00 4.40
6728 6867 6.201226 TGAACTTTTGCATTGTAGTTCACA 57.799 33.333 20.31 7.94 46.77 3.58
6731 6870 7.985634 TCTTTGAACTTTTGCATTGTAGTTC 57.014 32.000 17.11 17.11 44.14 3.01
6767 6907 8.625786 ATGGGAAAACGTAAAATAGTGTAGTT 57.374 30.769 0.00 0.00 0.00 2.24
6769 6909 8.179615 GGAATGGGAAAACGTAAAATAGTGTAG 58.820 37.037 0.00 0.00 0.00 2.74
6777 6917 6.597832 ATCATGGAATGGGAAAACGTAAAA 57.402 33.333 0.00 0.00 46.73 1.52
6788 6928 2.713167 ACTGGGACTATCATGGAATGGG 59.287 50.000 0.00 0.00 46.73 4.00
6948 7089 7.013823 TGAGTAGTAGGACACAACTAGTAGT 57.986 40.000 0.00 0.00 33.11 2.73
6950 7091 7.013823 ACTGAGTAGTAGGACACAACTAGTA 57.986 40.000 0.00 0.00 34.74 1.82
6984 7125 7.561021 TGTCATTTAAGCAGTTGTAACTTCA 57.439 32.000 0.00 0.00 37.08 3.02
6995 7136 2.033407 CGGAGCGATGTCATTTAAGCAG 60.033 50.000 0.00 0.00 0.00 4.24
7000 7141 2.425668 TCTCACGGAGCGATGTCATTTA 59.574 45.455 0.00 0.00 0.00 1.40
7003 7144 1.035923 ATCTCACGGAGCGATGTCAT 58.964 50.000 0.00 0.00 0.00 3.06
7004 7145 0.101219 CATCTCACGGAGCGATGTCA 59.899 55.000 0.00 0.00 32.07 3.58
7005 7146 1.211818 GCATCTCACGGAGCGATGTC 61.212 60.000 10.45 2.28 37.46 3.06
7006 7147 1.227089 GCATCTCACGGAGCGATGT 60.227 57.895 10.45 0.00 37.46 3.06
7007 7148 0.529337 AAGCATCTCACGGAGCGATG 60.529 55.000 5.93 5.93 38.02 3.84
7008 7149 1.032794 TAAGCATCTCACGGAGCGAT 58.967 50.000 0.00 0.00 0.00 4.58
7009 7150 0.815095 TTAAGCATCTCACGGAGCGA 59.185 50.000 0.00 0.00 0.00 4.93
7010 7151 1.640428 TTTAAGCATCTCACGGAGCG 58.360 50.000 0.00 0.00 0.00 5.03
7011 7152 3.001736 GTCATTTAAGCATCTCACGGAGC 59.998 47.826 0.00 0.00 0.00 4.70
7012 7153 4.183865 TGTCATTTAAGCATCTCACGGAG 58.816 43.478 0.00 0.00 0.00 4.63
7013 7154 4.200838 TGTCATTTAAGCATCTCACGGA 57.799 40.909 0.00 0.00 0.00 4.69
7014 7155 4.318333 CGATGTCATTTAAGCATCTCACGG 60.318 45.833 0.00 0.00 37.46 4.94
7015 7156 4.755388 CGATGTCATTTAAGCATCTCACG 58.245 43.478 0.00 0.00 37.46 4.35
7016 7157 4.272018 AGCGATGTCATTTAAGCATCTCAC 59.728 41.667 0.00 0.00 37.46 3.51
7017 7158 4.445453 AGCGATGTCATTTAAGCATCTCA 58.555 39.130 0.00 0.00 37.46 3.27
7018 7159 4.749099 AGAGCGATGTCATTTAAGCATCTC 59.251 41.667 0.00 0.00 37.46 2.75
7019 7160 4.510711 CAGAGCGATGTCATTTAAGCATCT 59.489 41.667 0.00 0.00 37.46 2.90
7020 7161 4.272018 ACAGAGCGATGTCATTTAAGCATC 59.728 41.667 0.00 0.00 36.57 3.91
7021 7162 4.034858 CACAGAGCGATGTCATTTAAGCAT 59.965 41.667 0.00 0.00 0.00 3.79
7022 7163 3.371898 CACAGAGCGATGTCATTTAAGCA 59.628 43.478 0.00 0.00 0.00 3.91
7023 7164 3.618594 TCACAGAGCGATGTCATTTAAGC 59.381 43.478 0.00 0.00 0.00 3.09
7024 7165 5.105063 TCTCACAGAGCGATGTCATTTAAG 58.895 41.667 0.00 0.00 0.00 1.85
7025 7166 5.072040 TCTCACAGAGCGATGTCATTTAA 57.928 39.130 0.00 0.00 0.00 1.52
7026 7167 4.718940 TCTCACAGAGCGATGTCATTTA 57.281 40.909 0.00 0.00 0.00 1.40
7032 7173 0.822811 AGCATCTCACAGAGCGATGT 59.177 50.000 0.00 0.00 37.46 3.06
7038 7179 2.381725 TGAGCAAGCATCTCACAGAG 57.618 50.000 0.00 0.00 35.81 3.35
7041 7182 4.859304 ATTTTTGAGCAAGCATCTCACA 57.141 36.364 2.64 0.00 39.99 3.58
7119 7260 7.718334 TGACCTGACAATAACAATCTCTAGA 57.282 36.000 0.00 0.00 0.00 2.43
7120 7261 8.777865 TTTGACCTGACAATAACAATCTCTAG 57.222 34.615 0.00 0.00 0.00 2.43
7125 7266 6.128007 ACGGATTTGACCTGACAATAACAATC 60.128 38.462 0.00 0.00 0.00 2.67
7146 7287 7.106890 TCTTGTCATATAAAATGGTCAACGGA 58.893 34.615 0.00 0.00 0.00 4.69
7170 7311 6.655848 TGTGTATGTGTGTTTTAGGGGTATTC 59.344 38.462 0.00 0.00 0.00 1.75
7175 7316 4.764823 ACATGTGTATGTGTGTTTTAGGGG 59.235 41.667 0.00 0.00 45.54 4.79
7176 7317 5.957842 ACATGTGTATGTGTGTTTTAGGG 57.042 39.130 0.00 0.00 45.54 3.53
7188 7329 2.159184 ACGGAGAGCTGACATGTGTATG 60.159 50.000 1.15 0.00 40.24 2.39
7189 7330 2.103373 ACGGAGAGCTGACATGTGTAT 58.897 47.619 1.15 0.00 0.00 2.29
7190 7331 1.545841 ACGGAGAGCTGACATGTGTA 58.454 50.000 1.15 0.00 0.00 2.90
7191 7332 1.545841 TACGGAGAGCTGACATGTGT 58.454 50.000 1.15 0.00 0.00 3.72
7202 7343 5.508153 CCCACACTTATTGAGATACGGAGAG 60.508 48.000 0.00 0.00 0.00 3.20
7207 7348 4.369182 GGACCCACACTTATTGAGATACG 58.631 47.826 0.00 0.00 0.00 3.06
7208 7349 4.163458 TGGGACCCACACTTATTGAGATAC 59.837 45.833 9.95 0.00 0.00 2.24
7223 7364 1.074090 TCCTGACAAGTGGGACCCA 60.074 57.895 9.95 9.95 0.00 4.51
7224 7365 1.128188 ACTCCTGACAAGTGGGACCC 61.128 60.000 2.45 2.45 0.00 4.46
7227 7372 1.623811 GCTTACTCCTGACAAGTGGGA 59.376 52.381 0.00 0.00 0.00 4.37
7246 7391 4.893424 TCCTGTAAAATTATCCGCTTGC 57.107 40.909 0.00 0.00 0.00 4.01
7274 7419 3.592059 CCAATTCATCCCAACAGCTTTG 58.408 45.455 0.00 0.00 0.00 2.77
7277 7422 1.358787 TCCCAATTCATCCCAACAGCT 59.641 47.619 0.00 0.00 0.00 4.24
7279 7424 2.102578 GGTCCCAATTCATCCCAACAG 58.897 52.381 0.00 0.00 0.00 3.16
7289 7434 9.143155 ACTACAATAAAATATGGGTCCCAATTC 57.857 33.333 16.55 0.00 36.95 2.17
7292 7437 7.644062 TCACTACAATAAAATATGGGTCCCAA 58.356 34.615 16.55 4.90 36.95 4.12
7304 7449 8.165267 TCCCCCTTTATCTCACTACAATAAAA 57.835 34.615 0.00 0.00 0.00 1.52
7322 7467 0.038744 CAACATGTCAGCTCCCCCTT 59.961 55.000 0.00 0.00 0.00 3.95
7327 7472 2.048603 GGGCCAACATGTCAGCTCC 61.049 63.158 16.87 13.14 0.00 4.70
7358 7503 5.670485 TCTCGTTTGCCATGTTATAGTGAT 58.330 37.500 0.00 0.00 0.00 3.06
7362 7507 7.015226 TCAAATCTCGTTTGCCATGTTATAG 57.985 36.000 0.00 0.00 45.45 1.31
7377 7522 5.689514 CCATTACTGTCTAGCTCAAATCTCG 59.310 44.000 0.00 0.00 0.00 4.04
7388 7533 5.171476 CCACTGAACACCATTACTGTCTAG 58.829 45.833 0.00 0.00 0.00 2.43
7390 7535 3.807209 GCCACTGAACACCATTACTGTCT 60.807 47.826 0.00 0.00 0.00 3.41
7391 7536 2.484264 GCCACTGAACACCATTACTGTC 59.516 50.000 0.00 0.00 0.00 3.51
7395 7540 4.519540 AAATGCCACTGAACACCATTAC 57.480 40.909 0.00 0.00 0.00 1.89
7416 7561 0.167908 CGTTAGGCGCATGCTCAAAA 59.832 50.000 17.13 2.92 42.25 2.44
7429 7574 1.392589 AATGCCATTGCCTCGTTAGG 58.607 50.000 0.00 0.00 46.76 2.69
7456 7601 8.225107 TCAGTTTTACGATTAGGAATTTCAACG 58.775 33.333 0.00 0.00 0.00 4.10
7470 7615 3.369157 GGCCCACTACTCAGTTTTACGAT 60.369 47.826 0.00 0.00 30.46 3.73
7472 7617 2.289195 TGGCCCACTACTCAGTTTTACG 60.289 50.000 0.00 0.00 30.46 3.18
7474 7619 2.706723 TGTGGCCCACTACTCAGTTTTA 59.293 45.455 16.23 0.00 35.11 1.52
7523 7668 8.856153 TCTAGTGATTAGGCATGTTAAAACAA 57.144 30.769 0.00 0.00 43.03 2.83
7545 7690 5.347124 TGTCCCTCACCCTATTTTTCTCTA 58.653 41.667 0.00 0.00 0.00 2.43
7548 7693 5.333566 TTTGTCCCTCACCCTATTTTTCT 57.666 39.130 0.00 0.00 0.00 2.52
7550 7695 8.679344 ATTATTTTGTCCCTCACCCTATTTTT 57.321 30.769 0.00 0.00 0.00 1.94
7555 7700 9.250246 CTTTTTATTATTTTGTCCCTCACCCTA 57.750 33.333 0.00 0.00 0.00 3.53
7578 7723 9.831737 CAAACAATCAAGTCGATCTTATTCTTT 57.168 29.630 0.00 0.00 34.66 2.52
7579 7724 9.219603 TCAAACAATCAAGTCGATCTTATTCTT 57.780 29.630 0.00 0.00 34.66 2.52
7593 7914 7.098477 TCCCTATGCATTTTCAAACAATCAAG 58.902 34.615 3.54 0.00 0.00 3.02
7627 7948 3.277416 AACTGAGGTAAACTCTCCCCT 57.723 47.619 0.00 0.00 46.72 4.79
7630 7951 6.606395 TCCATAGTAACTGAGGTAAACTCTCC 59.394 42.308 0.00 0.00 46.72 3.71
7648 7973 1.032657 AGCTCGCTCACGTCCATAGT 61.033 55.000 0.00 0.00 41.18 2.12
7649 7974 0.101399 AAGCTCGCTCACGTCCATAG 59.899 55.000 0.00 0.00 41.18 2.23
7650 7975 0.530744 AAAGCTCGCTCACGTCCATA 59.469 50.000 0.00 0.00 41.18 2.74
7655 7980 0.032952 TGGTAAAAGCTCGCTCACGT 59.967 50.000 0.00 0.00 41.18 4.49
7660 7985 3.560068 CCGAATAATGGTAAAAGCTCGCT 59.440 43.478 0.00 0.00 0.00 4.93
7661 7986 3.848554 GCCGAATAATGGTAAAAGCTCGC 60.849 47.826 0.00 0.00 0.00 5.03
7668 7993 7.378966 TGTCAAATTTGCCGAATAATGGTAAA 58.621 30.769 13.54 0.00 43.65 2.01
7672 7997 6.907206 ATTGTCAAATTTGCCGAATAATGG 57.093 33.333 13.54 0.00 0.00 3.16
7674 7999 8.997323 TCAAAATTGTCAAATTTGCCGAATAAT 58.003 25.926 17.69 3.88 43.63 1.28
7678 8003 5.007136 GGTCAAAATTGTCAAATTTGCCGAA 59.993 36.000 17.69 6.13 43.63 4.30
7682 8007 6.193761 CACAGGTCAAAATTGTCAAATTTGC 58.806 36.000 17.69 13.41 43.63 3.68
7683 8008 6.538021 TCCACAGGTCAAAATTGTCAAATTTG 59.462 34.615 16.75 16.75 43.63 2.32
7684 8009 6.538381 GTCCACAGGTCAAAATTGTCAAATTT 59.462 34.615 0.00 0.00 45.81 1.82
7685 8010 6.048509 GTCCACAGGTCAAAATTGTCAAATT 58.951 36.000 0.00 0.00 37.61 1.82
7686 8011 5.600696 GTCCACAGGTCAAAATTGTCAAAT 58.399 37.500 0.00 0.00 0.00 2.32
7687 8012 4.439426 CGTCCACAGGTCAAAATTGTCAAA 60.439 41.667 0.00 0.00 0.00 2.69
7688 8013 3.066064 CGTCCACAGGTCAAAATTGTCAA 59.934 43.478 0.00 0.00 0.00 3.18
7689 8014 2.616376 CGTCCACAGGTCAAAATTGTCA 59.384 45.455 0.00 0.00 0.00 3.58
7690 8015 2.875933 TCGTCCACAGGTCAAAATTGTC 59.124 45.455 0.00 0.00 0.00 3.18
7691 8016 2.925724 TCGTCCACAGGTCAAAATTGT 58.074 42.857 0.00 0.00 0.00 2.71
7692 8017 3.980646 TTCGTCCACAGGTCAAAATTG 57.019 42.857 0.00 0.00 0.00 2.32
7693 8018 4.582656 TGATTTCGTCCACAGGTCAAAATT 59.417 37.500 0.00 0.00 0.00 1.82
7694 8019 4.141287 TGATTTCGTCCACAGGTCAAAAT 58.859 39.130 0.00 0.00 0.00 1.82
7695 8020 3.546724 TGATTTCGTCCACAGGTCAAAA 58.453 40.909 0.00 0.00 0.00 2.44
7696 8021 3.201353 TGATTTCGTCCACAGGTCAAA 57.799 42.857 0.00 0.00 0.00 2.69
7697 8022 2.920724 TGATTTCGTCCACAGGTCAA 57.079 45.000 0.00 0.00 0.00 3.18
7698 8023 2.920724 TTGATTTCGTCCACAGGTCA 57.079 45.000 0.00 0.00 0.00 4.02
7699 8024 3.751175 TGAATTGATTTCGTCCACAGGTC 59.249 43.478 0.00 0.00 37.13 3.85
7700 8025 3.502211 GTGAATTGATTTCGTCCACAGGT 59.498 43.478 0.00 0.00 37.13 4.00
7701 8026 3.501828 TGTGAATTGATTTCGTCCACAGG 59.498 43.478 0.00 0.00 37.13 4.00
7702 8027 4.452114 TCTGTGAATTGATTTCGTCCACAG 59.548 41.667 0.00 0.00 46.55 3.66
7703 8028 4.384940 TCTGTGAATTGATTTCGTCCACA 58.615 39.130 0.00 0.00 37.13 4.17
7704 8029 5.356882 TTCTGTGAATTGATTTCGTCCAC 57.643 39.130 0.00 0.00 37.13 4.02
7705 8030 5.704978 TCATTCTGTGAATTGATTTCGTCCA 59.295 36.000 0.00 0.00 37.13 4.02
7706 8031 6.182039 TCATTCTGTGAATTGATTTCGTCC 57.818 37.500 0.00 0.00 37.13 4.79
7718 8043 1.202758 ACGGGCAGTTCATTCTGTGAA 60.203 47.619 0.00 0.00 44.36 3.18
7719 8044 0.396435 ACGGGCAGTTCATTCTGTGA 59.604 50.000 0.00 0.00 37.70 3.58
7720 8045 0.518636 CACGGGCAGTTCATTCTGTG 59.481 55.000 0.00 0.00 37.70 3.66
7721 8046 0.396435 TCACGGGCAGTTCATTCTGT 59.604 50.000 0.00 0.00 37.70 3.41
7722 8047 1.522668 TTCACGGGCAGTTCATTCTG 58.477 50.000 0.00 0.00 38.35 3.02
7723 8048 1.880027 GTTTCACGGGCAGTTCATTCT 59.120 47.619 0.00 0.00 0.00 2.40
7724 8049 1.880027 AGTTTCACGGGCAGTTCATTC 59.120 47.619 0.00 0.00 0.00 2.67
7725 8050 1.981256 AGTTTCACGGGCAGTTCATT 58.019 45.000 0.00 0.00 0.00 2.57
7726 8051 2.851263 TAGTTTCACGGGCAGTTCAT 57.149 45.000 0.00 0.00 0.00 2.57
7727 8052 2.851263 ATAGTTTCACGGGCAGTTCA 57.149 45.000 0.00 0.00 0.00 3.18
7728 8053 3.500680 TGAAATAGTTTCACGGGCAGTTC 59.499 43.478 1.24 0.00 44.21 3.01
7729 8054 3.482436 TGAAATAGTTTCACGGGCAGTT 58.518 40.909 1.24 0.00 44.21 3.16
7730 8055 3.134574 TGAAATAGTTTCACGGGCAGT 57.865 42.857 1.24 0.00 44.21 4.40
7738 8063 3.369756 GTCATCGGCGTGAAATAGTTTCA 59.630 43.478 6.85 1.24 46.68 2.69
7739 8064 3.242316 GGTCATCGGCGTGAAATAGTTTC 60.242 47.826 6.85 0.00 40.08 2.78
7740 8065 2.676342 GGTCATCGGCGTGAAATAGTTT 59.324 45.455 6.85 0.00 0.00 2.66
7741 8066 2.093658 AGGTCATCGGCGTGAAATAGTT 60.094 45.455 6.85 0.00 0.00 2.24
7742 8067 1.480954 AGGTCATCGGCGTGAAATAGT 59.519 47.619 6.85 0.00 0.00 2.12
7743 8068 2.225068 AGGTCATCGGCGTGAAATAG 57.775 50.000 6.85 0.00 0.00 1.73
7744 8069 2.684001 AAGGTCATCGGCGTGAAATA 57.316 45.000 6.85 0.00 0.00 1.40
7745 8070 1.821216 AAAGGTCATCGGCGTGAAAT 58.179 45.000 6.85 0.00 0.00 2.17
7746 8071 3.315765 AAAGGTCATCGGCGTGAAA 57.684 47.368 6.85 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.