Multiple sequence alignment - TraesCS2D01G454800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G454800 chr2D 100.000 2655 0 0 1 2655 562894661 562897315 0.000000e+00 4903.0
1 TraesCS2D01G454800 chr2D 96.072 942 36 1 1 941 318349615 318350556 0.000000e+00 1533.0
2 TraesCS2D01G454800 chr2D 86.565 655 69 8 963 1615 562858945 562859582 0.000000e+00 704.0
3 TraesCS2D01G454800 chr2D 89.941 507 40 5 963 1463 563008814 563009315 0.000000e+00 643.0
4 TraesCS2D01G454800 chr2D 87.075 147 17 2 2363 2507 87407383 87407529 5.880000e-37 165.0
5 TraesCS2D01G454800 chr2D 88.806 134 10 5 1581 1713 563009378 563009507 2.740000e-35 159.0
6 TraesCS2D01G454800 chr2D 88.095 126 11 4 2141 2262 562859906 562860031 2.130000e-31 147.0
7 TraesCS2D01G454800 chr2D 95.238 42 2 0 1904 1945 544576250 544576209 1.710000e-07 67.6
8 TraesCS2D01G454800 chr1D 96.639 952 31 1 1 951 469096607 469095656 0.000000e+00 1580.0
9 TraesCS2D01G454800 chr1D 95.754 942 39 1 1 941 433908652 433907711 0.000000e+00 1517.0
10 TraesCS2D01G454800 chr1D 91.837 49 4 0 1897 1945 11419334 11419382 4.740000e-08 69.4
11 TraesCS2D01G454800 chr7D 96.199 947 34 2 1 946 565208370 565207425 0.000000e+00 1548.0
12 TraesCS2D01G454800 chr7D 95.643 941 41 0 1 941 586894032 586893092 0.000000e+00 1511.0
13 TraesCS2D01G454800 chr7D 86.826 167 15 7 1938 2100 585713912 585714075 2.100000e-41 180.0
14 TraesCS2D01G454800 chr7D 87.970 133 14 1 2363 2493 123159189 123159057 3.540000e-34 156.0
15 TraesCS2D01G454800 chr7D 85.714 147 14 5 2363 2503 110096725 110096580 5.920000e-32 148.0
16 TraesCS2D01G454800 chr7D 100.000 28 0 0 1904 1931 353943917 353943944 5.000000e-03 52.8
17 TraesCS2D01G454800 chr2A 96.186 944 32 4 1 941 166852375 166851433 0.000000e+00 1541.0
18 TraesCS2D01G454800 chr2A 95.983 946 36 2 1 945 651134206 651133262 0.000000e+00 1535.0
19 TraesCS2D01G454800 chr2A 87.320 694 49 16 963 1629 703400066 703400747 0.000000e+00 758.0
20 TraesCS2D01G454800 chr2A 87.349 664 64 8 963 1624 703381869 703382514 0.000000e+00 743.0
21 TraesCS2D01G454800 chr2A 84.303 739 68 14 965 1694 703402835 703403534 0.000000e+00 678.0
22 TraesCS2D01G454800 chr2A 83.082 662 71 23 1063 1713 703353740 703354371 4.960000e-157 564.0
23 TraesCS2D01G454800 chr2A 88.816 152 13 4 2141 2289 703401842 703401992 1.620000e-42 183.0
24 TraesCS2D01G454800 chr2A 90.511 137 10 3 1940 2074 157931447 157931582 7.550000e-41 178.0
25 TraesCS2D01G454800 chr2A 86.928 153 15 5 2141 2289 703403873 703404024 1.630000e-37 167.0
26 TraesCS2D01G454800 chr2A 88.000 50 6 0 2066 2115 555883940 555883891 2.850000e-05 60.2
27 TraesCS2D01G454800 chr7A 95.855 941 38 1 1 941 47280722 47281661 0.000000e+00 1520.0
28 TraesCS2D01G454800 chr7A 87.143 70 8 1 2060 2128 74136302 74136371 7.880000e-11 78.7
29 TraesCS2D01G454800 chr5A 95.666 946 39 2 1 945 580928736 580927792 0.000000e+00 1519.0
30 TraesCS2D01G454800 chr5A 91.111 135 9 3 1940 2071 676370310 676370176 2.100000e-41 180.0
31 TraesCS2D01G454800 chr5A 93.750 48 3 0 1898 1945 108623918 108623871 3.670000e-09 73.1
32 TraesCS2D01G454800 chr2B 86.248 669 50 23 963 1629 673241795 673242423 0.000000e+00 688.0
33 TraesCS2D01G454800 chr2B 84.992 653 79 8 963 1615 673227501 673228134 0.000000e+00 645.0
34 TraesCS2D01G454800 chr2B 83.910 665 75 20 1063 1713 673170610 673171256 8.130000e-170 606.0
35 TraesCS2D01G454800 chr2B 85.052 194 16 8 2141 2329 673228458 673228643 4.510000e-43 185.0
36 TraesCS2D01G454800 chr2B 91.176 136 8 4 1941 2073 199013722 199013856 5.840000e-42 182.0
37 TraesCS2D01G454800 chr2B 88.742 151 13 4 2141 2288 673242873 673243022 5.840000e-42 182.0
38 TraesCS2D01G454800 chr5B 92.424 132 8 2 1940 2069 560436740 560436871 1.250000e-43 187.0
39 TraesCS2D01G454800 chr5D 92.366 131 8 2 1940 2068 445810644 445810774 4.510000e-43 185.0
40 TraesCS2D01G454800 chr5D 95.349 43 2 0 1903 1945 181886597 181886639 4.740000e-08 69.4
41 TraesCS2D01G454800 chr5D 95.238 42 2 0 1904 1945 537511233 537511274 1.710000e-07 67.6
42 TraesCS2D01G454800 chr6D 91.667 132 9 2 1943 2072 403312269 403312400 5.840000e-42 182.0
43 TraesCS2D01G454800 chr6D 85.417 144 18 3 2363 2503 17053295 17053152 2.130000e-31 147.0
44 TraesCS2D01G454800 chr6D 85.417 144 17 4 2363 2503 20298179 20298321 2.130000e-31 147.0
45 TraesCS2D01G454800 chr3D 91.667 132 9 2 1942 2071 6168866 6168735 5.840000e-42 182.0
46 TraesCS2D01G454800 chr3D 87.075 147 17 2 2363 2507 459077411 459077265 5.880000e-37 165.0
47 TraesCS2D01G454800 chr3D 95.455 44 2 0 1902 1945 404320770 404320813 1.320000e-08 71.3
48 TraesCS2D01G454800 chr3D 90.196 51 5 0 1896 1946 168289703 168289753 1.710000e-07 67.6
49 TraesCS2D01G454800 chr3D 100.000 28 0 0 1901 1928 311671923 311671896 5.000000e-03 52.8
50 TraesCS2D01G454800 chr4D 89.510 143 11 4 1933 2072 291740600 291740459 7.550000e-41 178.0
51 TraesCS2D01G454800 chr4D 84.000 150 24 0 2363 2512 18773939 18773790 7.660000e-31 145.0
52 TraesCS2D01G454800 chrUn 86.014 143 18 2 2363 2503 47689731 47689589 4.580000e-33 152.0
53 TraesCS2D01G454800 chr7B 86.014 143 18 2 2363 2503 121386264 121386122 4.580000e-33 152.0
54 TraesCS2D01G454800 chr4B 90.566 53 4 1 1903 1954 9464131 9464183 4.740000e-08 69.4
55 TraesCS2D01G454800 chr1B 93.333 45 3 0 1901 1945 50869007 50869051 1.710000e-07 67.6
56 TraesCS2D01G454800 chr3B 88.679 53 5 1 1892 1944 745550935 745550986 2.210000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G454800 chr2D 562894661 562897315 2654 False 4903.0 4903 100.00000 1 2655 1 chr2D.!!$F3 2654
1 TraesCS2D01G454800 chr2D 318349615 318350556 941 False 1533.0 1533 96.07200 1 941 1 chr2D.!!$F2 940
2 TraesCS2D01G454800 chr2D 562858945 562860031 1086 False 425.5 704 87.33000 963 2262 2 chr2D.!!$F4 1299
3 TraesCS2D01G454800 chr2D 563008814 563009507 693 False 401.0 643 89.37350 963 1713 2 chr2D.!!$F5 750
4 TraesCS2D01G454800 chr1D 469095656 469096607 951 True 1580.0 1580 96.63900 1 951 1 chr1D.!!$R2 950
5 TraesCS2D01G454800 chr1D 433907711 433908652 941 True 1517.0 1517 95.75400 1 941 1 chr1D.!!$R1 940
6 TraesCS2D01G454800 chr7D 565207425 565208370 945 True 1548.0 1548 96.19900 1 946 1 chr7D.!!$R3 945
7 TraesCS2D01G454800 chr7D 586893092 586894032 940 True 1511.0 1511 95.64300 1 941 1 chr7D.!!$R4 940
8 TraesCS2D01G454800 chr2A 166851433 166852375 942 True 1541.0 1541 96.18600 1 941 1 chr2A.!!$R1 940
9 TraesCS2D01G454800 chr2A 651133262 651134206 944 True 1535.0 1535 95.98300 1 945 1 chr2A.!!$R3 944
10 TraesCS2D01G454800 chr2A 703381869 703382514 645 False 743.0 743 87.34900 963 1624 1 chr2A.!!$F3 661
11 TraesCS2D01G454800 chr2A 703353740 703354371 631 False 564.0 564 83.08200 1063 1713 1 chr2A.!!$F2 650
12 TraesCS2D01G454800 chr2A 703400066 703404024 3958 False 446.5 758 86.84175 963 2289 4 chr2A.!!$F4 1326
13 TraesCS2D01G454800 chr7A 47280722 47281661 939 False 1520.0 1520 95.85500 1 941 1 chr7A.!!$F1 940
14 TraesCS2D01G454800 chr5A 580927792 580928736 944 True 1519.0 1519 95.66600 1 945 1 chr5A.!!$R2 944
15 TraesCS2D01G454800 chr2B 673170610 673171256 646 False 606.0 606 83.91000 1063 1713 1 chr2B.!!$F2 650
16 TraesCS2D01G454800 chr2B 673241795 673243022 1227 False 435.0 688 87.49500 963 2288 2 chr2B.!!$F4 1325
17 TraesCS2D01G454800 chr2B 673227501 673228643 1142 False 415.0 645 85.02200 963 2329 2 chr2B.!!$F3 1366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
853 861 0.683973 TGCCGACCCAAATGCAAAAT 59.316 45.0 0.0 0.0 0.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2603 5660 0.190815 ACCAGCCTGGGGAAAATGTT 59.809 50.0 16.7 0.0 43.37 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
233 234 4.516698 GTGGACGGCATGATGAATAAGAAT 59.483 41.667 0.00 0.00 0.00 2.40
752 759 1.750399 GGTGCCGGCATGAGACATT 60.750 57.895 35.23 0.00 0.00 2.71
807 814 7.861176 TTATTTAAAAGTTGAATGCGGACAC 57.139 32.000 0.00 0.00 0.00 3.67
853 861 0.683973 TGCCGACCCAAATGCAAAAT 59.316 45.000 0.00 0.00 0.00 1.82
860 868 1.805869 CCAAATGCAAAATTGGGCGA 58.194 45.000 17.20 0.00 41.93 5.54
941 949 2.703798 CGCCCCATTGGAGTTGCTG 61.704 63.158 3.62 0.00 35.39 4.41
946 954 2.290896 CCCCATTGGAGTTGCTGTTAGA 60.291 50.000 3.62 0.00 35.39 2.10
947 955 3.012518 CCCATTGGAGTTGCTGTTAGAG 58.987 50.000 3.62 0.00 0.00 2.43
948 956 3.307691 CCCATTGGAGTTGCTGTTAGAGA 60.308 47.826 3.62 0.00 0.00 3.10
950 958 4.154918 CCATTGGAGTTGCTGTTAGAGAAC 59.845 45.833 0.00 0.00 36.00 3.01
951 959 4.415881 TTGGAGTTGCTGTTAGAGAACA 57.584 40.909 0.00 0.00 43.41 3.18
1004 1012 1.371183 CTCCGCTTCACCCAACTCA 59.629 57.895 0.00 0.00 0.00 3.41
1019 1027 1.343069 ACTCACTCGCTTCCCTCTTT 58.657 50.000 0.00 0.00 0.00 2.52
1032 1045 2.107366 CCCTCTTTCTCTGTCTCCCTC 58.893 57.143 0.00 0.00 0.00 4.30
1033 1046 2.292192 CCCTCTTTCTCTGTCTCCCTCT 60.292 54.545 0.00 0.00 0.00 3.69
1046 1068 1.133809 TCCCTCTCCCCACACCAAAG 61.134 60.000 0.00 0.00 0.00 2.77
1047 1069 1.303643 CCTCTCCCCACACCAAAGC 60.304 63.158 0.00 0.00 0.00 3.51
1048 1070 1.455849 CTCTCCCCACACCAAAGCA 59.544 57.895 0.00 0.00 0.00 3.91
1049 1071 0.607489 CTCTCCCCACACCAAAGCAG 60.607 60.000 0.00 0.00 0.00 4.24
1050 1072 2.203480 TCCCCACACCAAAGCAGC 60.203 61.111 0.00 0.00 0.00 5.25
1051 1073 2.521465 CCCCACACCAAAGCAGCA 60.521 61.111 0.00 0.00 0.00 4.41
1083 1107 1.035139 CACCACAAAGCCAAGCTCTT 58.965 50.000 0.00 0.00 38.25 2.85
1302 1343 3.857854 CGCCACGAGCAGATGCAC 61.858 66.667 7.68 0.00 45.16 4.57
1389 4160 1.449246 GCGCTGGCATCAAGAGTCT 60.449 57.895 0.00 0.00 39.62 3.24
1458 4229 4.837972 AGAGTAGAGTTTGGCTTGAATCC 58.162 43.478 0.00 0.00 0.00 3.01
1499 4274 0.315568 ATCTGGCGATACGAAGGAGC 59.684 55.000 0.00 0.00 0.00 4.70
1508 4283 0.809385 TACGAAGGAGCTTGGTCTCG 59.191 55.000 9.00 9.00 34.49 4.04
1511 4286 0.739112 GAAGGAGCTTGGTCTCGCTG 60.739 60.000 0.00 0.00 36.45 5.18
1522 4301 2.497675 TGGTCTCGCTGCTTTATCTCTT 59.502 45.455 0.00 0.00 0.00 2.85
1549 4328 1.066502 GCAGGAGAGGAAGTGAAGGAC 60.067 57.143 0.00 0.00 0.00 3.85
1550 4329 2.251818 CAGGAGAGGAAGTGAAGGACA 58.748 52.381 0.00 0.00 0.00 4.02
1551 4330 2.836981 CAGGAGAGGAAGTGAAGGACAT 59.163 50.000 0.00 0.00 0.00 3.06
1552 4331 4.026744 CAGGAGAGGAAGTGAAGGACATA 58.973 47.826 0.00 0.00 0.00 2.29
1560 4343 7.955185 AGAGGAAGTGAAGGACATATCTATCAT 59.045 37.037 0.00 0.00 0.00 2.45
1572 4355 8.256605 GGACATATCTATCATAGTTCATGTGCT 58.743 37.037 14.44 0.00 35.96 4.40
1573 4356 8.999220 ACATATCTATCATAGTTCATGTGCTG 57.001 34.615 7.38 0.00 35.96 4.41
1574 4357 8.810041 ACATATCTATCATAGTTCATGTGCTGA 58.190 33.333 7.38 0.00 35.96 4.26
1575 4358 9.303537 CATATCTATCATAGTTCATGTGCTGAG 57.696 37.037 0.00 0.00 34.68 3.35
1576 4359 6.094193 TCTATCATAGTTCATGTGCTGAGG 57.906 41.667 0.00 0.00 34.68 3.86
1577 4360 2.910199 TCATAGTTCATGTGCTGAGGC 58.090 47.619 0.00 0.00 34.68 4.70
1578 4361 2.236893 TCATAGTTCATGTGCTGAGGCA 59.763 45.455 0.00 0.00 38.60 4.75
1624 4407 0.605589 CACTGGACGCTTCCTTCTCT 59.394 55.000 11.01 0.00 43.31 3.10
1629 4412 1.003233 ACGCTTCCTTCTCTTGGCC 60.003 57.895 0.00 0.00 0.00 5.36
1637 4420 1.535444 TTCTCTTGGCCCCGACTGA 60.535 57.895 0.00 0.00 0.00 3.41
1645 4428 1.376037 GCCCCGACTGACTCCTTTG 60.376 63.158 0.00 0.00 0.00 2.77
1659 4486 0.947244 CCTTTGTGCCTCTGTGTGTC 59.053 55.000 0.00 0.00 0.00 3.67
1713 4559 6.972328 GTGCAACACCATATGTAAATCGAAAT 59.028 34.615 1.24 0.00 42.31 2.17
1716 4562 7.700234 GCAACACCATATGTAAATCGAAATCAA 59.300 33.333 1.24 0.00 42.31 2.57
1717 4563 9.009327 CAACACCATATGTAAATCGAAATCAAC 57.991 33.333 1.24 0.00 42.31 3.18
1718 4564 7.703328 ACACCATATGTAAATCGAAATCAACC 58.297 34.615 1.24 0.00 40.88 3.77
1722 4586 8.194104 CCATATGTAAATCGAAATCAACCCAAA 58.806 33.333 1.24 0.00 0.00 3.28
1739 4610 1.991965 CAAATTTTTGGCCACCGATCG 59.008 47.619 3.88 8.51 34.59 3.69
1744 4615 3.599285 TTGGCCACCGATCGTGACC 62.599 63.158 15.09 14.03 46.20 4.02
1759 4633 2.926200 CGTGACCTGTCTGAGCTTTATG 59.074 50.000 0.00 0.00 0.00 1.90
1761 4636 4.319177 GTGACCTGTCTGAGCTTTATGTT 58.681 43.478 0.00 0.00 0.00 2.71
1763 4638 5.239525 GTGACCTGTCTGAGCTTTATGTTTT 59.760 40.000 0.00 0.00 0.00 2.43
1764 4639 5.470098 TGACCTGTCTGAGCTTTATGTTTTC 59.530 40.000 0.00 0.00 0.00 2.29
1765 4640 4.452455 ACCTGTCTGAGCTTTATGTTTTCG 59.548 41.667 0.00 0.00 0.00 3.46
1766 4641 4.690748 CCTGTCTGAGCTTTATGTTTTCGA 59.309 41.667 0.00 0.00 0.00 3.71
1769 4644 5.931724 TGTCTGAGCTTTATGTTTTCGATCA 59.068 36.000 0.00 0.00 0.00 2.92
1770 4645 6.426633 TGTCTGAGCTTTATGTTTTCGATCAA 59.573 34.615 0.00 0.00 0.00 2.57
1771 4646 7.119699 TGTCTGAGCTTTATGTTTTCGATCAAT 59.880 33.333 0.00 0.00 0.00 2.57
1772 4647 7.637907 GTCTGAGCTTTATGTTTTCGATCAATC 59.362 37.037 0.00 0.00 0.00 2.67
1773 4648 7.334171 TCTGAGCTTTATGTTTTCGATCAATCA 59.666 33.333 0.00 0.00 0.00 2.57
1774 4649 7.988737 TGAGCTTTATGTTTTCGATCAATCAT 58.011 30.769 0.00 0.00 0.00 2.45
1775 4650 9.108284 TGAGCTTTATGTTTTCGATCAATCATA 57.892 29.630 0.00 0.00 0.00 2.15
1782 4722 5.215160 GTTTTCGATCAATCATATGCACCC 58.785 41.667 0.00 0.00 0.00 4.61
1784 4724 4.356405 TCGATCAATCATATGCACCCTT 57.644 40.909 0.00 0.00 0.00 3.95
1793 4733 5.290493 TCATATGCACCCTTAAATCTCGT 57.710 39.130 0.00 0.00 0.00 4.18
1797 4737 2.280628 GCACCCTTAAATCTCGTCAGG 58.719 52.381 0.00 0.00 0.00 3.86
1799 4739 1.906574 ACCCTTAAATCTCGTCAGGCA 59.093 47.619 0.00 0.00 0.00 4.75
1801 4741 2.939103 CCCTTAAATCTCGTCAGGCAAG 59.061 50.000 0.00 0.00 0.00 4.01
1802 4742 3.600388 CCTTAAATCTCGTCAGGCAAGT 58.400 45.455 0.00 0.00 0.00 3.16
1806 4746 3.678056 AATCTCGTCAGGCAAGTACAA 57.322 42.857 0.00 0.00 0.00 2.41
1807 4747 2.433868 TCTCGTCAGGCAAGTACAAC 57.566 50.000 0.00 0.00 0.00 3.32
1808 4748 1.684450 TCTCGTCAGGCAAGTACAACA 59.316 47.619 0.00 0.00 0.00 3.33
1810 4750 3.067106 CTCGTCAGGCAAGTACAACATT 58.933 45.455 0.00 0.00 0.00 2.71
1811 4751 4.021807 TCTCGTCAGGCAAGTACAACATTA 60.022 41.667 0.00 0.00 0.00 1.90
1812 4752 4.827692 TCGTCAGGCAAGTACAACATTAT 58.172 39.130 0.00 0.00 0.00 1.28
1813 4753 4.629634 TCGTCAGGCAAGTACAACATTATG 59.370 41.667 0.00 0.00 0.00 1.90
1814 4754 4.662145 GTCAGGCAAGTACAACATTATGC 58.338 43.478 0.00 0.00 0.00 3.14
1815 4755 4.396166 GTCAGGCAAGTACAACATTATGCT 59.604 41.667 0.00 0.00 34.37 3.79
1816 4756 5.584649 GTCAGGCAAGTACAACATTATGCTA 59.415 40.000 0.00 0.00 34.37 3.49
1817 4757 6.260936 GTCAGGCAAGTACAACATTATGCTAT 59.739 38.462 0.00 0.00 34.37 2.97
1818 4758 7.441157 GTCAGGCAAGTACAACATTATGCTATA 59.559 37.037 0.00 0.00 34.37 1.31
1819 4759 7.441157 TCAGGCAAGTACAACATTATGCTATAC 59.559 37.037 0.00 0.00 34.37 1.47
1820 4760 7.226523 CAGGCAAGTACAACATTATGCTATACA 59.773 37.037 0.00 0.00 34.37 2.29
1821 4761 7.773224 AGGCAAGTACAACATTATGCTATACAA 59.227 33.333 0.00 0.00 34.37 2.41
1870 4921 4.433674 CGTCGTTTCGCTATGAATCAAACA 60.434 41.667 0.00 0.00 36.22 2.83
1872 4923 6.507299 CGTCGTTTCGCTATGAATCAAACATA 60.507 38.462 0.00 0.00 36.22 2.29
1874 4925 5.611596 CGTTTCGCTATGAATCAAACATACG 59.388 40.000 0.00 0.00 36.22 3.06
1875 4926 5.651172 TTCGCTATGAATCAAACATACGG 57.349 39.130 0.00 0.00 32.08 4.02
1876 4927 4.689071 TCGCTATGAATCAAACATACGGT 58.311 39.130 0.00 0.00 32.08 4.83
1877 4928 5.113383 TCGCTATGAATCAAACATACGGTT 58.887 37.500 0.00 0.00 42.98 4.44
1884 4935 3.341857 TCAAACATACGGTTGTGCAAC 57.658 42.857 6.52 6.52 40.35 4.17
1902 4953 7.537715 TGTGCAACATTCCTCTGTTAATTATG 58.462 34.615 0.00 0.00 45.67 1.90
1903 4954 7.176515 TGTGCAACATTCCTCTGTTAATTATGT 59.823 33.333 0.00 0.00 45.67 2.29
1904 4955 8.673711 GTGCAACATTCCTCTGTTAATTATGTA 58.326 33.333 0.00 0.00 37.25 2.29
1905 4956 8.673711 TGCAACATTCCTCTGTTAATTATGTAC 58.326 33.333 0.00 0.00 37.25 2.90
1906 4957 8.893727 GCAACATTCCTCTGTTAATTATGTACT 58.106 33.333 0.00 0.00 37.25 2.73
1908 4959 9.614792 AACATTCCTCTGTTAATTATGTACTCC 57.385 33.333 0.00 0.00 37.58 3.85
1909 4960 8.211629 ACATTCCTCTGTTAATTATGTACTCCC 58.788 37.037 0.00 0.00 0.00 4.30
1910 4961 7.989947 TTCCTCTGTTAATTATGTACTCCCT 57.010 36.000 0.00 0.00 0.00 4.20
1911 4962 7.598759 TCCTCTGTTAATTATGTACTCCCTC 57.401 40.000 0.00 0.00 0.00 4.30
1912 4963 6.553852 TCCTCTGTTAATTATGTACTCCCTCC 59.446 42.308 0.00 0.00 0.00 4.30
1913 4964 6.401047 TCTGTTAATTATGTACTCCCTCCG 57.599 41.667 0.00 0.00 0.00 4.63
1914 4965 5.895534 TCTGTTAATTATGTACTCCCTCCGT 59.104 40.000 0.00 0.00 0.00 4.69
1915 4966 6.381994 TCTGTTAATTATGTACTCCCTCCGTT 59.618 38.462 0.00 0.00 0.00 4.44
1916 4967 6.576185 TGTTAATTATGTACTCCCTCCGTTC 58.424 40.000 0.00 0.00 0.00 3.95
1917 4968 4.317671 AATTATGTACTCCCTCCGTTCG 57.682 45.455 0.00 0.00 0.00 3.95
1918 4969 2.715749 TATGTACTCCCTCCGTTCGA 57.284 50.000 0.00 0.00 0.00 3.71
1919 4970 1.843368 ATGTACTCCCTCCGTTCGAA 58.157 50.000 0.00 0.00 0.00 3.71
1920 4971 1.619654 TGTACTCCCTCCGTTCGAAA 58.380 50.000 0.00 0.00 0.00 3.46
1921 4972 1.962807 TGTACTCCCTCCGTTCGAAAA 59.037 47.619 0.00 0.00 0.00 2.29
1922 4973 2.364970 TGTACTCCCTCCGTTCGAAAAA 59.635 45.455 0.00 0.00 0.00 1.94
1923 4974 2.165319 ACTCCCTCCGTTCGAAAAAG 57.835 50.000 0.00 0.00 0.00 2.27
1924 4975 0.796927 CTCCCTCCGTTCGAAAAAGC 59.203 55.000 0.00 0.00 0.00 3.51
1925 4976 0.395312 TCCCTCCGTTCGAAAAAGCT 59.605 50.000 0.00 0.00 0.00 3.74
1926 4977 1.202722 TCCCTCCGTTCGAAAAAGCTT 60.203 47.619 0.00 0.00 0.00 3.74
1927 4978 1.069227 CCCTCCGTTCGAAAAAGCTTG 60.069 52.381 0.00 0.00 0.00 4.01
1928 4979 1.602377 CCTCCGTTCGAAAAAGCTTGT 59.398 47.619 0.00 0.00 0.00 3.16
1929 4980 2.349532 CCTCCGTTCGAAAAAGCTTGTC 60.350 50.000 0.00 0.00 0.00 3.18
1930 4981 1.600485 TCCGTTCGAAAAAGCTTGTCC 59.400 47.619 0.00 0.00 0.00 4.02
1931 4982 1.658968 CGTTCGAAAAAGCTTGTCCG 58.341 50.000 0.00 0.00 0.00 4.79
1932 4983 1.004292 CGTTCGAAAAAGCTTGTCCGT 60.004 47.619 0.00 0.00 0.00 4.69
1933 4984 2.636519 GTTCGAAAAAGCTTGTCCGTC 58.363 47.619 0.00 0.00 0.00 4.79
1934 4985 1.942677 TCGAAAAAGCTTGTCCGTCA 58.057 45.000 0.00 0.00 0.00 4.35
1935 4986 2.281517 TCGAAAAAGCTTGTCCGTCAA 58.718 42.857 0.00 0.00 34.61 3.18
1936 4987 2.678836 TCGAAAAAGCTTGTCCGTCAAA 59.321 40.909 0.00 0.00 35.48 2.69
1937 4988 3.314080 TCGAAAAAGCTTGTCCGTCAAAT 59.686 39.130 0.00 0.00 35.48 2.32
1938 4989 3.421888 CGAAAAAGCTTGTCCGTCAAATG 59.578 43.478 0.00 0.00 35.48 2.32
1939 4990 4.606961 GAAAAAGCTTGTCCGTCAAATGA 58.393 39.130 0.00 0.00 35.48 2.57
1940 4991 4.647424 AAAAGCTTGTCCGTCAAATGAA 57.353 36.364 0.00 0.00 35.48 2.57
1941 4992 4.853924 AAAGCTTGTCCGTCAAATGAAT 57.146 36.364 0.00 0.00 35.48 2.57
1942 4993 3.837213 AGCTTGTCCGTCAAATGAATG 57.163 42.857 0.00 0.00 35.48 2.67
1943 4994 3.149196 AGCTTGTCCGTCAAATGAATGT 58.851 40.909 0.00 0.00 35.48 2.71
1944 4995 4.323417 AGCTTGTCCGTCAAATGAATGTA 58.677 39.130 0.00 0.00 35.48 2.29
1945 4996 4.154195 AGCTTGTCCGTCAAATGAATGTAC 59.846 41.667 0.00 0.00 35.48 2.90
1946 4997 4.154195 GCTTGTCCGTCAAATGAATGTACT 59.846 41.667 0.00 0.00 35.48 2.73
1947 4998 5.671329 GCTTGTCCGTCAAATGAATGTACTC 60.671 44.000 0.00 0.00 35.48 2.59
1948 4999 4.250464 TGTCCGTCAAATGAATGTACTCC 58.750 43.478 0.00 0.00 0.00 3.85
1949 5000 3.621715 GTCCGTCAAATGAATGTACTCCC 59.378 47.826 0.00 0.00 0.00 4.30
1950 5001 3.517901 TCCGTCAAATGAATGTACTCCCT 59.482 43.478 0.00 0.00 0.00 4.20
1951 5002 3.871594 CCGTCAAATGAATGTACTCCCTC 59.128 47.826 0.00 0.00 0.00 4.30
1952 5003 3.871594 CGTCAAATGAATGTACTCCCTCC 59.128 47.826 0.00 0.00 0.00 4.30
1953 5004 4.622933 CGTCAAATGAATGTACTCCCTCCA 60.623 45.833 0.00 0.00 0.00 3.86
1954 5005 5.440610 GTCAAATGAATGTACTCCCTCCAT 58.559 41.667 0.00 0.00 0.00 3.41
1955 5006 5.529060 GTCAAATGAATGTACTCCCTCCATC 59.471 44.000 0.00 0.00 0.00 3.51
1956 5007 5.429762 TCAAATGAATGTACTCCCTCCATCT 59.570 40.000 0.00 0.00 0.00 2.90
1957 5008 5.983333 AATGAATGTACTCCCTCCATCTT 57.017 39.130 0.00 0.00 0.00 2.40
1958 5009 7.127186 TCAAATGAATGTACTCCCTCCATCTTA 59.873 37.037 0.00 0.00 0.00 2.10
1959 5010 7.451731 AATGAATGTACTCCCTCCATCTTAA 57.548 36.000 0.00 0.00 0.00 1.85
1960 5011 6.884472 TGAATGTACTCCCTCCATCTTAAA 57.116 37.500 0.00 0.00 0.00 1.52
1961 5012 7.265599 TGAATGTACTCCCTCCATCTTAAAA 57.734 36.000 0.00 0.00 0.00 1.52
1962 5013 7.872138 TGAATGTACTCCCTCCATCTTAAAAT 58.128 34.615 0.00 0.00 0.00 1.82
1963 5014 8.336235 TGAATGTACTCCCTCCATCTTAAAATT 58.664 33.333 0.00 0.00 0.00 1.82
1964 5015 8.753497 AATGTACTCCCTCCATCTTAAAATTC 57.247 34.615 0.00 0.00 0.00 2.17
1965 5016 7.510675 TGTACTCCCTCCATCTTAAAATTCT 57.489 36.000 0.00 0.00 0.00 2.40
1966 5017 7.928873 TGTACTCCCTCCATCTTAAAATTCTT 58.071 34.615 0.00 0.00 0.00 2.52
1967 5018 7.829211 TGTACTCCCTCCATCTTAAAATTCTTG 59.171 37.037 0.00 0.00 0.00 3.02
1968 5019 6.794534 ACTCCCTCCATCTTAAAATTCTTGT 58.205 36.000 0.00 0.00 0.00 3.16
1969 5020 6.887002 ACTCCCTCCATCTTAAAATTCTTGTC 59.113 38.462 0.00 0.00 0.00 3.18
1970 5021 7.032598 TCCCTCCATCTTAAAATTCTTGTCT 57.967 36.000 0.00 0.00 0.00 3.41
1971 5022 7.470192 TCCCTCCATCTTAAAATTCTTGTCTT 58.530 34.615 0.00 0.00 0.00 3.01
1972 5023 8.611257 TCCCTCCATCTTAAAATTCTTGTCTTA 58.389 33.333 0.00 0.00 0.00 2.10
1973 5024 8.897752 CCCTCCATCTTAAAATTCTTGTCTTAG 58.102 37.037 0.00 0.00 0.00 2.18
1974 5025 9.672673 CCTCCATCTTAAAATTCTTGTCTTAGA 57.327 33.333 0.00 0.00 0.00 2.10
2024 5075 9.578439 AGTTACGTTTTAGTGTTAGATACATCC 57.422 33.333 0.00 0.00 39.39 3.51
2025 5076 8.526681 GTTACGTTTTAGTGTTAGATACATCCG 58.473 37.037 0.00 0.00 39.39 4.18
2026 5077 6.624423 ACGTTTTAGTGTTAGATACATCCGT 58.376 36.000 0.00 0.00 39.39 4.69
2027 5078 7.761409 ACGTTTTAGTGTTAGATACATCCGTA 58.239 34.615 0.00 0.00 39.39 4.02
2028 5079 8.408601 ACGTTTTAGTGTTAGATACATCCGTAT 58.591 33.333 0.00 0.00 41.16 3.06
2029 5080 8.688184 CGTTTTAGTGTTAGATACATCCGTATG 58.312 37.037 0.00 0.00 38.48 2.39
2045 5096 9.661563 ACATCCGTATGTAAAAATCTAAGACAA 57.338 29.630 0.00 0.00 44.66 3.18
2048 5099 9.932207 TCCGTATGTAAAAATCTAAGACAAGAA 57.068 29.630 0.00 0.00 0.00 2.52
2059 5110 9.720769 AAATCTAAGACAAGAATTTTAGGACGA 57.279 29.630 0.00 0.00 0.00 4.20
2060 5111 9.720769 AATCTAAGACAAGAATTTTAGGACGAA 57.279 29.630 0.00 0.00 0.00 3.85
2061 5112 8.758633 TCTAAGACAAGAATTTTAGGACGAAG 57.241 34.615 0.00 0.00 0.00 3.79
2062 5113 6.803154 AAGACAAGAATTTTAGGACGAAGG 57.197 37.500 0.00 0.00 0.00 3.46
2063 5114 5.246307 AGACAAGAATTTTAGGACGAAGGG 58.754 41.667 0.00 0.00 0.00 3.95
2064 5115 5.012768 AGACAAGAATTTTAGGACGAAGGGA 59.987 40.000 0.00 0.00 0.00 4.20
2065 5116 5.246307 ACAAGAATTTTAGGACGAAGGGAG 58.754 41.667 0.00 0.00 0.00 4.30
2066 5117 5.221864 ACAAGAATTTTAGGACGAAGGGAGT 60.222 40.000 0.00 0.00 0.00 3.85
2067 5118 6.013984 ACAAGAATTTTAGGACGAAGGGAGTA 60.014 38.462 0.00 0.00 0.00 2.59
2068 5119 6.809976 AGAATTTTAGGACGAAGGGAGTAT 57.190 37.500 0.00 0.00 0.00 2.12
2069 5120 6.818233 AGAATTTTAGGACGAAGGGAGTATC 58.182 40.000 0.00 0.00 0.00 2.24
2070 5121 6.612049 AGAATTTTAGGACGAAGGGAGTATCT 59.388 38.462 0.00 0.00 33.73 1.98
2071 5122 7.783596 AGAATTTTAGGACGAAGGGAGTATCTA 59.216 37.037 0.00 0.00 33.73 1.98
2072 5123 6.956202 TTTTAGGACGAAGGGAGTATCTAG 57.044 41.667 0.00 0.00 33.73 2.43
2073 5124 2.866351 AGGACGAAGGGAGTATCTAGC 58.134 52.381 0.00 0.00 33.73 3.42
2074 5125 2.175069 AGGACGAAGGGAGTATCTAGCA 59.825 50.000 0.00 0.00 33.73 3.49
2075 5126 2.293955 GGACGAAGGGAGTATCTAGCAC 59.706 54.545 0.00 0.00 33.73 4.40
2076 5127 2.293955 GACGAAGGGAGTATCTAGCACC 59.706 54.545 0.00 0.00 33.73 5.01
2077 5128 2.307768 CGAAGGGAGTATCTAGCACCA 58.692 52.381 0.00 0.00 33.73 4.17
2078 5129 2.693591 CGAAGGGAGTATCTAGCACCAA 59.306 50.000 0.00 0.00 33.73 3.67
2079 5130 3.132289 CGAAGGGAGTATCTAGCACCAAA 59.868 47.826 0.00 0.00 33.73 3.28
2080 5131 4.202264 CGAAGGGAGTATCTAGCACCAAAT 60.202 45.833 0.00 0.00 33.73 2.32
2081 5132 5.685075 CGAAGGGAGTATCTAGCACCAAATT 60.685 44.000 0.00 0.00 33.73 1.82
2082 5133 6.462487 CGAAGGGAGTATCTAGCACCAAATTA 60.462 42.308 0.00 0.00 33.73 1.40
2083 5134 6.426646 AGGGAGTATCTAGCACCAAATTAG 57.573 41.667 0.00 0.00 33.73 1.73
2084 5135 5.905913 AGGGAGTATCTAGCACCAAATTAGT 59.094 40.000 0.00 0.00 33.73 2.24
2085 5136 5.992217 GGGAGTATCTAGCACCAAATTAGTG 59.008 44.000 4.54 4.54 34.99 2.74
2086 5137 6.408206 GGGAGTATCTAGCACCAAATTAGTGT 60.408 42.308 9.55 1.56 34.58 3.55
2087 5138 7.048512 GGAGTATCTAGCACCAAATTAGTGTT 58.951 38.462 9.55 6.73 34.58 3.32
2088 5139 8.202137 GGAGTATCTAGCACCAAATTAGTGTTA 58.798 37.037 9.55 7.40 34.58 2.41
2089 5140 9.250624 GAGTATCTAGCACCAAATTAGTGTTAG 57.749 37.037 18.60 18.60 45.27 2.34
2117 5168 6.796785 ATTCATTTGAGGGATAAACTTGGG 57.203 37.500 0.00 0.00 0.00 4.12
2118 5169 5.528600 TCATTTGAGGGATAAACTTGGGA 57.471 39.130 0.00 0.00 0.00 4.37
2119 5170 5.261216 TCATTTGAGGGATAAACTTGGGAC 58.739 41.667 0.00 0.00 0.00 4.46
2120 5171 4.733077 TTTGAGGGATAAACTTGGGACA 57.267 40.909 0.00 0.00 0.00 4.02
2135 5186 3.556999 TGGGACAAATTTTTCGGACAGA 58.443 40.909 0.00 0.00 31.92 3.41
2136 5187 3.568007 TGGGACAAATTTTTCGGACAGAG 59.432 43.478 0.00 0.00 31.92 3.35
2137 5188 3.057526 GGGACAAATTTTTCGGACAGAGG 60.058 47.826 0.00 0.00 0.00 3.69
2138 5189 3.057526 GGACAAATTTTTCGGACAGAGGG 60.058 47.826 0.00 0.00 0.00 4.30
2139 5190 3.818773 GACAAATTTTTCGGACAGAGGGA 59.181 43.478 0.00 0.00 0.00 4.20
2149 5200 1.285373 GGACAGAGGGAGTAGACAGGA 59.715 57.143 0.00 0.00 0.00 3.86
2196 5249 8.754230 AGAAGATTCCAACTTAGTTACGTTAC 57.246 34.615 0.00 0.00 0.00 2.50
2198 5251 9.846248 GAAGATTCCAACTTAGTTACGTTACTA 57.154 33.333 10.23 10.23 0.00 1.82
2202 5255 9.987272 ATTCCAACTTAGTTACGTTACTAAACT 57.013 29.630 23.01 15.14 39.43 2.66
2225 5279 3.103742 ACAGCAAAAGGTGGGAAAAAGA 58.896 40.909 0.00 0.00 0.00 2.52
2289 5346 7.693952 TGCTGTTGATATAACGATTTTCCTTC 58.306 34.615 0.00 0.00 0.00 3.46
2290 5347 6.846283 GCTGTTGATATAACGATTTTCCTTCG 59.154 38.462 0.00 0.00 42.20 3.79
2298 5355 0.446616 GATTTTCCTTCGTGTCCCGC 59.553 55.000 0.00 0.00 36.19 6.13
2301 5358 0.899720 TTTCCTTCGTGTCCCGCTAT 59.100 50.000 0.00 0.00 36.19 2.97
2311 5368 2.866762 GTGTCCCGCTATTCAAGATGAC 59.133 50.000 0.00 0.00 0.00 3.06
2322 5379 7.173907 CGCTATTCAAGATGACAGGGATTTAAT 59.826 37.037 0.00 0.00 0.00 1.40
2329 5386 9.565090 CAAGATGACAGGGATTTAATTCTATGA 57.435 33.333 8.40 0.00 0.00 2.15
2331 5388 9.956640 AGATGACAGGGATTTAATTCTATGATC 57.043 33.333 8.40 0.00 0.00 2.92
2332 5389 9.171877 GATGACAGGGATTTAATTCTATGATCC 57.828 37.037 0.00 0.00 36.40 3.36
2333 5390 7.161404 TGACAGGGATTTAATTCTATGATCCG 58.839 38.462 0.00 0.00 37.69 4.18
2334 5391 7.079451 ACAGGGATTTAATTCTATGATCCGT 57.921 36.000 0.00 0.00 37.69 4.69
2335 5392 7.369803 CAGGGATTTAATTCTATGATCCGTG 57.630 40.000 8.43 8.43 42.63 4.94
2336 5393 7.316393 AGGGATTTAATTCTATGATCCGTGA 57.684 36.000 0.00 0.00 37.69 4.35
2337 5394 7.922382 AGGGATTTAATTCTATGATCCGTGAT 58.078 34.615 0.00 0.00 37.69 3.06
2338 5395 8.043710 AGGGATTTAATTCTATGATCCGTGATC 58.956 37.037 6.87 6.87 37.69 2.92
2339 5396 7.010552 GGGATTTAATTCTATGATCCGTGATCG 59.989 40.741 8.68 0.00 41.51 3.69
2340 5397 6.706055 TTTAATTCTATGATCCGTGATCGC 57.294 37.500 0.00 0.00 41.51 4.58
2341 5398 2.724977 TTCTATGATCCGTGATCGCC 57.275 50.000 0.00 0.00 41.51 5.54
2342 5399 1.911057 TCTATGATCCGTGATCGCCT 58.089 50.000 0.00 0.00 41.51 5.52
2343 5400 1.541588 TCTATGATCCGTGATCGCCTG 59.458 52.381 0.00 0.00 41.51 4.85
2344 5401 0.603065 TATGATCCGTGATCGCCTGG 59.397 55.000 0.00 0.00 41.51 4.45
2345 5402 2.663188 GATCCGTGATCGCCTGGC 60.663 66.667 9.11 9.11 35.54 4.85
2346 5403 4.241555 ATCCGTGATCGCCTGGCC 62.242 66.667 14.12 0.00 35.54 5.36
2348 5405 4.552365 CCGTGATCGCCTGGCCAT 62.552 66.667 14.12 5.61 35.54 4.40
2349 5406 3.274586 CGTGATCGCCTGGCCATG 61.275 66.667 14.12 4.20 0.00 3.66
2350 5407 3.589881 GTGATCGCCTGGCCATGC 61.590 66.667 21.93 21.93 0.00 4.06
2351 5408 4.112433 TGATCGCCTGGCCATGCA 62.112 61.111 29.18 17.97 0.00 3.96
2352 5409 2.829914 GATCGCCTGGCCATGCAA 60.830 61.111 29.18 15.05 0.00 4.08
2353 5410 2.831742 ATCGCCTGGCCATGCAAG 60.832 61.111 29.18 16.05 0.00 4.01
2362 5419 3.759581 CTGGCCATGCAAGGATATTAGT 58.240 45.455 13.26 0.00 0.00 2.24
2363 5420 4.910195 CTGGCCATGCAAGGATATTAGTA 58.090 43.478 13.26 0.00 0.00 1.82
2364 5421 5.503927 CTGGCCATGCAAGGATATTAGTAT 58.496 41.667 13.26 0.00 0.00 2.12
2365 5422 6.634889 TGGCCATGCAAGGATATTAGTATA 57.365 37.500 13.26 0.00 0.00 1.47
2366 5423 7.026697 TGGCCATGCAAGGATATTAGTATAA 57.973 36.000 13.26 0.00 0.00 0.98
2367 5424 7.112122 TGGCCATGCAAGGATATTAGTATAAG 58.888 38.462 13.26 0.00 0.00 1.73
2368 5425 7.112779 GGCCATGCAAGGATATTAGTATAAGT 58.887 38.462 13.26 0.00 0.00 2.24
2369 5426 7.281100 GGCCATGCAAGGATATTAGTATAAGTC 59.719 40.741 13.26 0.00 0.00 3.01
2370 5427 7.824289 GCCATGCAAGGATATTAGTATAAGTCA 59.176 37.037 13.26 0.00 0.00 3.41
2371 5428 9.896645 CCATGCAAGGATATTAGTATAAGTCAT 57.103 33.333 0.35 0.00 0.00 3.06
2404 5461 9.422196 GATTTTAATATAGACAACACACGAAGC 57.578 33.333 0.00 0.00 0.00 3.86
2405 5462 7.892778 TTTAATATAGACAACACACGAAGCA 57.107 32.000 0.00 0.00 0.00 3.91
2406 5463 7.892778 TTAATATAGACAACACACGAAGCAA 57.107 32.000 0.00 0.00 0.00 3.91
2407 5464 6.795098 AATATAGACAACACACGAAGCAAA 57.205 33.333 0.00 0.00 0.00 3.68
2408 5465 6.985188 ATATAGACAACACACGAAGCAAAT 57.015 33.333 0.00 0.00 0.00 2.32
2409 5466 5.689383 ATAGACAACACACGAAGCAAATT 57.311 34.783 0.00 0.00 0.00 1.82
2410 5467 3.694734 AGACAACACACGAAGCAAATTG 58.305 40.909 0.00 0.00 0.00 2.32
2411 5468 3.376859 AGACAACACACGAAGCAAATTGA 59.623 39.130 0.00 0.00 0.00 2.57
2412 5469 3.694734 ACAACACACGAAGCAAATTGAG 58.305 40.909 0.00 0.00 0.00 3.02
2413 5470 3.128589 ACAACACACGAAGCAAATTGAGT 59.871 39.130 0.00 0.00 0.00 3.41
2414 5471 3.338818 ACACACGAAGCAAATTGAGTG 57.661 42.857 0.00 3.72 34.22 3.51
2415 5472 2.942376 ACACACGAAGCAAATTGAGTGA 59.058 40.909 14.45 0.00 33.03 3.41
2416 5473 3.376859 ACACACGAAGCAAATTGAGTGAA 59.623 39.130 14.45 0.00 33.03 3.18
2417 5474 3.725740 CACACGAAGCAAATTGAGTGAAC 59.274 43.478 14.45 0.00 33.03 3.18
2418 5475 3.243068 ACACGAAGCAAATTGAGTGAACC 60.243 43.478 14.45 0.00 33.03 3.62
2419 5476 3.003689 CACGAAGCAAATTGAGTGAACCT 59.996 43.478 0.00 0.00 31.32 3.50
2420 5477 4.213270 CACGAAGCAAATTGAGTGAACCTA 59.787 41.667 0.00 0.00 31.32 3.08
2421 5478 4.213482 ACGAAGCAAATTGAGTGAACCTAC 59.787 41.667 0.00 0.00 0.00 3.18
2422 5479 4.213270 CGAAGCAAATTGAGTGAACCTACA 59.787 41.667 0.00 0.00 0.00 2.74
2423 5480 5.438761 AAGCAAATTGAGTGAACCTACAC 57.561 39.130 0.00 0.00 40.60 2.90
2472 5529 9.725019 TCATATGTAGTTTGTGTTGAAATCTCT 57.275 29.630 1.90 0.00 0.00 3.10
2514 5571 3.124578 GGGGGAGTACTACTCTACGAG 57.875 57.143 14.61 0.00 44.46 4.18
2515 5572 2.437651 GGGGGAGTACTACTCTACGAGT 59.562 54.545 14.61 1.82 44.46 4.18
2516 5573 3.118075 GGGGGAGTACTACTCTACGAGTT 60.118 52.174 14.61 0.00 44.46 3.01
2517 5574 4.522114 GGGGAGTACTACTCTACGAGTTT 58.478 47.826 14.61 0.00 44.46 2.66
2518 5575 4.946772 GGGGAGTACTACTCTACGAGTTTT 59.053 45.833 14.61 0.00 44.46 2.43
2519 5576 5.163673 GGGGAGTACTACTCTACGAGTTTTG 60.164 48.000 14.61 0.00 44.46 2.44
2520 5577 5.414144 GGGAGTACTACTCTACGAGTTTTGT 59.586 44.000 14.61 2.91 44.46 2.83
2521 5578 6.072230 GGGAGTACTACTCTACGAGTTTTGTT 60.072 42.308 14.61 0.00 44.46 2.83
2522 5579 7.119846 GGGAGTACTACTCTACGAGTTTTGTTA 59.880 40.741 14.61 0.00 44.46 2.41
2523 5580 8.507249 GGAGTACTACTCTACGAGTTTTGTTAA 58.493 37.037 14.61 0.00 44.46 2.01
2524 5581 9.323963 GAGTACTACTCTACGAGTTTTGTTAAC 57.676 37.037 8.74 0.00 40.28 2.01
2525 5582 8.012241 AGTACTACTCTACGAGTTTTGTTAACG 58.988 37.037 1.45 0.00 40.28 3.18
2526 5583 6.959361 ACTACTCTACGAGTTTTGTTAACGA 58.041 36.000 1.45 0.00 40.28 3.85
2527 5584 6.853362 ACTACTCTACGAGTTTTGTTAACGAC 59.147 38.462 1.45 0.07 40.28 4.34
2528 5585 4.978580 ACTCTACGAGTTTTGTTAACGACC 59.021 41.667 0.26 0.00 40.28 4.79
2529 5586 4.930963 TCTACGAGTTTTGTTAACGACCA 58.069 39.130 0.26 0.00 0.00 4.02
2530 5587 5.531634 TCTACGAGTTTTGTTAACGACCAT 58.468 37.500 0.26 0.00 0.00 3.55
2531 5588 5.984926 TCTACGAGTTTTGTTAACGACCATT 59.015 36.000 0.26 0.00 0.00 3.16
2532 5589 5.488645 ACGAGTTTTGTTAACGACCATTT 57.511 34.783 0.26 0.00 0.00 2.32
2533 5590 5.504392 ACGAGTTTTGTTAACGACCATTTC 58.496 37.500 0.26 0.00 0.00 2.17
2534 5591 5.295045 ACGAGTTTTGTTAACGACCATTTCT 59.705 36.000 0.26 0.00 0.00 2.52
2535 5592 5.619607 CGAGTTTTGTTAACGACCATTTCTG 59.380 40.000 0.26 0.00 0.00 3.02
2569 5626 9.816354 AATATTCTCAAAATAAAATCCCGTTGG 57.184 29.630 0.00 0.00 0.00 3.77
2570 5627 6.658188 TTCTCAAAATAAAATCCCGTTGGT 57.342 33.333 0.00 0.00 0.00 3.67
2571 5628 7.762588 TTCTCAAAATAAAATCCCGTTGGTA 57.237 32.000 0.00 0.00 0.00 3.25
2572 5629 7.762588 TCTCAAAATAAAATCCCGTTGGTAA 57.237 32.000 0.00 0.00 0.00 2.85
2573 5630 8.179509 TCTCAAAATAAAATCCCGTTGGTAAA 57.820 30.769 0.00 0.00 0.00 2.01
2574 5631 8.808092 TCTCAAAATAAAATCCCGTTGGTAAAT 58.192 29.630 0.00 0.00 0.00 1.40
2575 5632 8.764524 TCAAAATAAAATCCCGTTGGTAAATG 57.235 30.769 0.00 0.00 0.00 2.32
2576 5633 7.332182 TCAAAATAAAATCCCGTTGGTAAATGC 59.668 33.333 0.00 0.00 0.00 3.56
2577 5634 5.923733 ATAAAATCCCGTTGGTAAATGCA 57.076 34.783 0.00 0.00 0.00 3.96
2578 5635 4.817318 AAAATCCCGTTGGTAAATGCAT 57.183 36.364 0.00 0.00 0.00 3.96
2579 5636 5.923733 AAAATCCCGTTGGTAAATGCATA 57.076 34.783 0.00 0.00 0.00 3.14
2580 5637 5.923733 AAATCCCGTTGGTAAATGCATAA 57.076 34.783 0.00 0.00 0.00 1.90
2581 5638 5.514274 AATCCCGTTGGTAAATGCATAAG 57.486 39.130 0.00 0.00 0.00 1.73
2582 5639 4.223556 TCCCGTTGGTAAATGCATAAGA 57.776 40.909 0.00 0.00 0.00 2.10
2583 5640 4.196193 TCCCGTTGGTAAATGCATAAGAG 58.804 43.478 0.00 0.00 0.00 2.85
2584 5641 4.080807 TCCCGTTGGTAAATGCATAAGAGA 60.081 41.667 0.00 0.00 0.00 3.10
2585 5642 4.638421 CCCGTTGGTAAATGCATAAGAGAA 59.362 41.667 0.00 0.00 0.00 2.87
2586 5643 5.124776 CCCGTTGGTAAATGCATAAGAGAAA 59.875 40.000 0.00 0.00 0.00 2.52
2587 5644 6.349777 CCCGTTGGTAAATGCATAAGAGAAAA 60.350 38.462 0.00 0.00 0.00 2.29
2588 5645 6.526674 CCGTTGGTAAATGCATAAGAGAAAAC 59.473 38.462 0.00 0.00 0.00 2.43
2589 5646 7.081349 CGTTGGTAAATGCATAAGAGAAAACA 58.919 34.615 0.00 0.00 0.00 2.83
2590 5647 7.593273 CGTTGGTAAATGCATAAGAGAAAACAA 59.407 33.333 0.00 0.00 0.00 2.83
2591 5648 9.255304 GTTGGTAAATGCATAAGAGAAAACAAA 57.745 29.630 0.00 0.00 0.00 2.83
2592 5649 9.995003 TTGGTAAATGCATAAGAGAAAACAAAT 57.005 25.926 0.00 0.00 0.00 2.32
2593 5650 9.421806 TGGTAAATGCATAAGAGAAAACAAATG 57.578 29.630 0.00 0.00 0.00 2.32
2594 5651 9.423061 GGTAAATGCATAAGAGAAAACAAATGT 57.577 29.630 0.00 0.00 0.00 2.71
2597 5654 6.768029 TGCATAAGAGAAAACAAATGTTGC 57.232 33.333 0.00 0.00 38.44 4.17
2598 5655 6.279123 TGCATAAGAGAAAACAAATGTTGCA 58.721 32.000 0.00 0.00 38.44 4.08
2599 5656 6.760298 TGCATAAGAGAAAACAAATGTTGCAA 59.240 30.769 0.00 0.00 38.44 4.08
2600 5657 7.065283 GCATAAGAGAAAACAAATGTTGCAAC 58.935 34.615 22.83 22.83 38.44 4.17
2601 5658 7.042523 GCATAAGAGAAAACAAATGTTGCAACT 60.043 33.333 28.61 12.75 38.44 3.16
2602 5659 6.651755 AAGAGAAAACAAATGTTGCAACTG 57.348 33.333 28.61 20.88 38.44 3.16
2603 5660 5.964758 AGAGAAAACAAATGTTGCAACTGA 58.035 33.333 28.61 11.56 38.44 3.41
2604 5661 6.397272 AGAGAAAACAAATGTTGCAACTGAA 58.603 32.000 28.61 10.80 38.44 3.02
2605 5662 6.311200 AGAGAAAACAAATGTTGCAACTGAAC 59.689 34.615 28.61 4.73 38.44 3.18
2606 5663 5.931146 AGAAAACAAATGTTGCAACTGAACA 59.069 32.000 28.61 10.94 38.44 3.18
2607 5664 6.594937 AGAAAACAAATGTTGCAACTGAACAT 59.405 30.769 28.61 12.86 44.21 2.71
2612 5669 5.989551 AATGTTGCAACTGAACATTTTCC 57.010 34.783 28.61 0.00 46.90 3.13
2613 5670 3.791245 TGTTGCAACTGAACATTTTCCC 58.209 40.909 28.61 0.00 0.00 3.97
2614 5671 3.130633 GTTGCAACTGAACATTTTCCCC 58.869 45.455 22.36 0.00 0.00 4.81
2615 5672 2.392662 TGCAACTGAACATTTTCCCCA 58.607 42.857 0.00 0.00 0.00 4.96
2616 5673 2.364970 TGCAACTGAACATTTTCCCCAG 59.635 45.455 0.00 0.00 0.00 4.45
2617 5674 2.289010 GCAACTGAACATTTTCCCCAGG 60.289 50.000 0.00 0.00 0.00 4.45
2618 5675 1.632589 ACTGAACATTTTCCCCAGGC 58.367 50.000 0.00 0.00 0.00 4.85
2619 5676 1.147817 ACTGAACATTTTCCCCAGGCT 59.852 47.619 0.00 0.00 0.00 4.58
2620 5677 1.547372 CTGAACATTTTCCCCAGGCTG 59.453 52.381 7.75 7.75 0.00 4.85
2621 5678 0.897621 GAACATTTTCCCCAGGCTGG 59.102 55.000 27.04 27.04 37.25 4.85
2622 5679 0.190815 AACATTTTCCCCAGGCTGGT 59.809 50.000 30.68 9.61 35.17 4.00
2623 5680 0.542702 ACATTTTCCCCAGGCTGGTG 60.543 55.000 30.68 21.39 35.17 4.17
2624 5681 0.251742 CATTTTCCCCAGGCTGGTGA 60.252 55.000 30.68 23.51 35.17 4.02
2625 5682 0.712380 ATTTTCCCCAGGCTGGTGAT 59.288 50.000 30.68 14.21 35.17 3.06
2626 5683 0.039618 TTTTCCCCAGGCTGGTGATC 59.960 55.000 30.68 0.00 35.17 2.92
2627 5684 2.196997 TTTCCCCAGGCTGGTGATCG 62.197 60.000 30.68 15.56 35.17 3.69
2628 5685 3.402681 CCCCAGGCTGGTGATCGT 61.403 66.667 30.68 0.00 35.17 3.73
2629 5686 2.124983 CCCAGGCTGGTGATCGTG 60.125 66.667 30.68 10.91 35.17 4.35
2630 5687 2.124983 CCAGGCTGGTGATCGTGG 60.125 66.667 25.74 0.00 31.35 4.94
2631 5688 2.659063 CCAGGCTGGTGATCGTGGA 61.659 63.158 25.74 0.00 39.79 4.02
2632 5689 1.296392 CAGGCTGGTGATCGTGGAA 59.704 57.895 6.61 0.00 0.00 3.53
2633 5690 1.021390 CAGGCTGGTGATCGTGGAAC 61.021 60.000 6.61 0.00 0.00 3.62
2646 5703 2.094762 GTGGAACGAATGGTACTGCT 57.905 50.000 0.00 0.00 0.00 4.24
2647 5704 3.241067 GTGGAACGAATGGTACTGCTA 57.759 47.619 0.00 0.00 0.00 3.49
2648 5705 2.928116 GTGGAACGAATGGTACTGCTAC 59.072 50.000 0.00 0.00 0.00 3.58
2649 5706 2.563620 TGGAACGAATGGTACTGCTACA 59.436 45.455 0.00 0.00 0.00 2.74
2650 5707 2.928116 GGAACGAATGGTACTGCTACAC 59.072 50.000 0.00 0.00 0.00 2.90
2651 5708 2.273370 ACGAATGGTACTGCTACACG 57.727 50.000 0.00 0.00 0.00 4.49
2652 5709 1.814394 ACGAATGGTACTGCTACACGA 59.186 47.619 0.00 0.00 0.00 4.35
2653 5710 2.426024 ACGAATGGTACTGCTACACGAT 59.574 45.455 0.00 0.00 0.00 3.73
2654 5711 3.119245 ACGAATGGTACTGCTACACGATT 60.119 43.478 0.00 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
233 234 0.616111 GCTCCTCCTCCCTTGAGTCA 60.616 60.000 0.00 0.00 36.86 3.41
941 949 6.096987 TGGTGATGGACTATCTGTTCTCTAAC 59.903 42.308 0.15 0.00 36.71 2.34
946 954 8.907829 ATATATGGTGATGGACTATCTGTTCT 57.092 34.615 0.15 0.00 36.71 3.01
948 956 8.982723 GGTATATATGGTGATGGACTATCTGTT 58.017 37.037 0.15 0.00 36.71 3.16
950 958 7.255625 CCGGTATATATGGTGATGGACTATCTG 60.256 44.444 0.00 0.00 36.71 2.90
951 959 6.778069 CCGGTATATATGGTGATGGACTATCT 59.222 42.308 0.00 0.00 36.71 1.98
952 960 6.776116 TCCGGTATATATGGTGATGGACTATC 59.224 42.308 0.00 0.00 36.29 2.08
953 961 6.679542 TCCGGTATATATGGTGATGGACTAT 58.320 40.000 0.00 0.00 0.00 2.12
954 962 6.082228 TCCGGTATATATGGTGATGGACTA 57.918 41.667 0.00 0.00 0.00 2.59
955 963 4.942944 TCCGGTATATATGGTGATGGACT 58.057 43.478 0.00 0.00 0.00 3.85
956 964 4.441634 GCTCCGGTATATATGGTGATGGAC 60.442 50.000 0.00 0.00 0.00 4.02
957 965 3.704566 GCTCCGGTATATATGGTGATGGA 59.295 47.826 0.00 0.00 0.00 3.41
958 966 3.181465 GGCTCCGGTATATATGGTGATGG 60.181 52.174 0.00 0.00 0.00 3.51
959 967 3.706594 AGGCTCCGGTATATATGGTGATG 59.293 47.826 0.00 0.66 0.00 3.07
960 968 3.995636 AGGCTCCGGTATATATGGTGAT 58.004 45.455 0.00 0.00 0.00 3.06
961 969 3.468071 AGGCTCCGGTATATATGGTGA 57.532 47.619 0.00 0.00 0.00 4.02
1004 1012 1.548269 CAGAGAAAGAGGGAAGCGAGT 59.452 52.381 0.00 0.00 0.00 4.18
1019 1027 0.851332 TGGGGAGAGGGAGACAGAGA 60.851 60.000 0.00 0.00 0.00 3.10
1032 1045 2.270986 GCTGCTTTGGTGTGGGGAG 61.271 63.158 0.00 0.00 0.00 4.30
1033 1046 2.203480 GCTGCTTTGGTGTGGGGA 60.203 61.111 0.00 0.00 0.00 4.81
1046 1068 3.103911 CGCTTGCTTGCTTGCTGC 61.104 61.111 0.00 0.00 43.25 5.25
1047 1069 3.103911 GCGCTTGCTTGCTTGCTG 61.104 61.111 0.00 0.00 35.07 4.41
1048 1070 3.598715 TGCGCTTGCTTGCTTGCT 61.599 55.556 9.73 0.00 40.12 3.91
1049 1071 3.400590 GTGCGCTTGCTTGCTTGC 61.401 61.111 9.73 0.00 40.12 4.01
1050 1072 2.732094 GGTGCGCTTGCTTGCTTG 60.732 61.111 9.73 0.00 40.12 4.01
1051 1073 3.218470 TGGTGCGCTTGCTTGCTT 61.218 55.556 9.73 0.00 40.12 3.91
1083 1107 2.408050 GAGTTTCGAGCAAAGCTGAGA 58.592 47.619 0.00 0.00 39.88 3.27
1145 1183 2.350522 GCTCCGCATCAAAGAAGAAGA 58.649 47.619 0.00 0.00 0.00 2.87
1228 1269 0.108662 ATGAAGATGTCGCTGTCGCA 60.109 50.000 0.00 0.00 35.30 5.10
1389 4160 3.998672 GCGACGGACACCTTCCCA 61.999 66.667 0.00 0.00 42.27 4.37
1499 4274 2.863137 GAGATAAAGCAGCGAGACCAAG 59.137 50.000 0.00 0.00 0.00 3.61
1508 4283 2.613133 CTCAGGCAAGAGATAAAGCAGC 59.387 50.000 1.17 0.00 37.87 5.25
1511 4286 2.636830 TGCTCAGGCAAGAGATAAAGC 58.363 47.619 10.65 0.00 46.36 3.51
1531 4310 2.704190 TGTCCTTCACTTCCTCTCCT 57.296 50.000 0.00 0.00 0.00 3.69
1549 4328 9.303537 CTCAGCACATGAACTATGATAGATATG 57.696 37.037 6.45 9.44 39.21 1.78
1550 4329 8.476447 CCTCAGCACATGAACTATGATAGATAT 58.524 37.037 6.45 0.00 39.21 1.63
1551 4330 7.578380 GCCTCAGCACATGAACTATGATAGATA 60.578 40.741 6.45 0.00 40.14 1.98
1552 4331 6.699366 CCTCAGCACATGAACTATGATAGAT 58.301 40.000 6.45 0.00 39.21 1.98
1560 4343 1.625315 ACTGCCTCAGCACATGAACTA 59.375 47.619 0.00 0.00 46.52 2.24
1572 4355 3.385384 CGGAGCCTCACTGCCTCA 61.385 66.667 0.00 0.00 31.88 3.86
1573 4356 4.154347 CCGGAGCCTCACTGCCTC 62.154 72.222 0.00 0.00 31.88 4.70
1615 4398 1.537889 TCGGGGCCAAGAGAAGGAA 60.538 57.895 4.39 0.00 0.00 3.36
1624 4407 3.319198 GGAGTCAGTCGGGGCCAA 61.319 66.667 4.39 0.00 0.00 4.52
1629 4412 0.951040 GCACAAAGGAGTCAGTCGGG 60.951 60.000 0.00 0.00 0.00 5.14
1637 4420 0.839946 ACACAGAGGCACAAAGGAGT 59.160 50.000 0.00 0.00 0.00 3.85
1645 4428 1.668419 ACAAAGACACACAGAGGCAC 58.332 50.000 0.00 0.00 0.00 5.01
1687 4519 4.938226 TCGATTTACATATGGTGTTGCACA 59.062 37.500 7.80 0.00 42.29 4.57
1722 4586 0.525761 CACGATCGGTGGCCAAAAAT 59.474 50.000 20.98 0.00 43.16 1.82
1734 4605 0.524392 GCTCAGACAGGTCACGATCG 60.524 60.000 14.88 14.88 0.00 3.69
1739 4610 3.931578 ACATAAAGCTCAGACAGGTCAC 58.068 45.455 1.84 0.00 30.18 3.67
1744 4615 5.845985 TCGAAAACATAAAGCTCAGACAG 57.154 39.130 0.00 0.00 0.00 3.51
1759 4633 5.009010 AGGGTGCATATGATTGATCGAAAAC 59.991 40.000 6.97 0.00 0.00 2.43
1761 4636 4.717877 AGGGTGCATATGATTGATCGAAA 58.282 39.130 6.97 0.00 0.00 3.46
1763 4638 4.356405 AAGGGTGCATATGATTGATCGA 57.644 40.909 6.97 0.00 0.00 3.59
1764 4639 6.558771 TTTAAGGGTGCATATGATTGATCG 57.441 37.500 6.97 0.00 0.00 3.69
1765 4640 8.345724 AGATTTAAGGGTGCATATGATTGATC 57.654 34.615 6.97 0.00 0.00 2.92
1766 4641 7.120285 CGAGATTTAAGGGTGCATATGATTGAT 59.880 37.037 6.97 0.00 0.00 2.57
1769 4644 6.299141 ACGAGATTTAAGGGTGCATATGATT 58.701 36.000 6.97 0.00 0.00 2.57
1770 4645 5.869579 ACGAGATTTAAGGGTGCATATGAT 58.130 37.500 6.97 0.00 0.00 2.45
1771 4646 5.163353 TGACGAGATTTAAGGGTGCATATGA 60.163 40.000 6.97 0.00 0.00 2.15
1772 4647 5.056480 TGACGAGATTTAAGGGTGCATATG 58.944 41.667 0.00 0.00 0.00 1.78
1773 4648 5.290493 TGACGAGATTTAAGGGTGCATAT 57.710 39.130 0.00 0.00 0.00 1.78
1774 4649 4.442893 CCTGACGAGATTTAAGGGTGCATA 60.443 45.833 0.00 0.00 0.00 3.14
1775 4650 3.535561 CTGACGAGATTTAAGGGTGCAT 58.464 45.455 0.00 0.00 0.00 3.96
1782 4722 5.168569 TGTACTTGCCTGACGAGATTTAAG 58.831 41.667 0.00 0.00 33.49 1.85
1784 4724 4.794278 TGTACTTGCCTGACGAGATTTA 57.206 40.909 0.00 0.00 33.49 1.40
1793 4733 4.588899 AGCATAATGTTGTACTTGCCTGA 58.411 39.130 0.00 0.00 0.00 3.86
1797 4737 8.993852 CTTGTATAGCATAATGTTGTACTTGC 57.006 34.615 0.00 0.00 29.32 4.01
1813 4753 0.579156 GCTGTCTGCGCTTGTATAGC 59.421 55.000 9.73 7.55 46.83 2.97
1831 4771 1.184481 CGACGTAATCTCGTTAAGCGC 59.816 52.381 0.00 0.00 44.21 5.92
1839 4779 1.531912 AGCGAAACGACGTAATCTCG 58.468 50.000 0.00 8.94 37.17 4.04
1840 4780 4.277258 TCATAGCGAAACGACGTAATCTC 58.723 43.478 0.00 0.00 35.59 2.75
1841 4781 4.282950 TCATAGCGAAACGACGTAATCT 57.717 40.909 0.00 0.00 35.59 2.40
1842 4782 5.172591 TGATTCATAGCGAAACGACGTAATC 59.827 40.000 0.00 4.24 37.12 1.75
1844 4784 4.413969 TGATTCATAGCGAAACGACGTAA 58.586 39.130 0.00 0.00 37.12 3.18
1852 4903 5.583061 ACCGTATGTTTGATTCATAGCGAAA 59.417 36.000 0.00 0.00 37.12 3.46
1857 4908 5.965334 GCACAACCGTATGTTTGATTCATAG 59.035 40.000 0.00 0.00 34.00 2.23
1870 4921 2.747446 GAGGAATGTTGCACAACCGTAT 59.253 45.455 10.82 0.00 40.46 3.06
1872 4923 0.951558 GAGGAATGTTGCACAACCGT 59.048 50.000 10.82 0.00 40.46 4.83
1874 4925 1.956477 ACAGAGGAATGTTGCACAACC 59.044 47.619 10.82 0.00 40.46 3.77
1875 4926 3.715628 AACAGAGGAATGTTGCACAAC 57.284 42.857 6.57 6.57 41.76 3.32
1876 4927 6.403866 AATTAACAGAGGAATGTTGCACAA 57.596 33.333 2.48 0.00 43.14 3.33
1877 4928 7.176515 ACATAATTAACAGAGGAATGTTGCACA 59.823 33.333 2.48 0.00 43.14 4.57
1884 4935 8.432805 AGGGAGTACATAATTAACAGAGGAATG 58.567 37.037 0.00 0.00 0.00 2.67
1899 4950 2.715749 TCGAACGGAGGGAGTACATA 57.284 50.000 0.00 0.00 0.00 2.29
1902 4953 2.730550 TTTTCGAACGGAGGGAGTAC 57.269 50.000 0.00 0.00 0.00 2.73
1903 4954 2.611224 GCTTTTTCGAACGGAGGGAGTA 60.611 50.000 0.00 0.00 0.00 2.59
1904 4955 1.876837 GCTTTTTCGAACGGAGGGAGT 60.877 52.381 0.00 0.00 0.00 3.85
1905 4956 0.796927 GCTTTTTCGAACGGAGGGAG 59.203 55.000 0.00 0.00 0.00 4.30
1906 4957 0.395312 AGCTTTTTCGAACGGAGGGA 59.605 50.000 0.00 0.00 0.00 4.20
1907 4958 1.069227 CAAGCTTTTTCGAACGGAGGG 60.069 52.381 0.00 0.00 0.00 4.30
1908 4959 1.602377 ACAAGCTTTTTCGAACGGAGG 59.398 47.619 0.00 0.00 0.00 4.30
1909 4960 2.349532 GGACAAGCTTTTTCGAACGGAG 60.350 50.000 0.00 0.00 0.00 4.63
1910 4961 1.600485 GGACAAGCTTTTTCGAACGGA 59.400 47.619 0.00 0.00 0.00 4.69
1911 4962 1.659211 CGGACAAGCTTTTTCGAACGG 60.659 52.381 7.56 0.00 0.00 4.44
1912 4963 1.004292 ACGGACAAGCTTTTTCGAACG 60.004 47.619 19.83 9.63 0.00 3.95
1913 4964 2.031191 TGACGGACAAGCTTTTTCGAAC 59.969 45.455 19.83 12.78 0.00 3.95
1914 4965 2.281517 TGACGGACAAGCTTTTTCGAA 58.718 42.857 19.83 4.97 0.00 3.71
1915 4966 1.942677 TGACGGACAAGCTTTTTCGA 58.057 45.000 19.83 0.00 0.00 3.71
1916 4967 2.748461 TTGACGGACAAGCTTTTTCG 57.252 45.000 11.74 11.74 34.20 3.46
1917 4968 4.606961 TCATTTGACGGACAAGCTTTTTC 58.393 39.130 0.00 0.00 39.77 2.29
1918 4969 4.647424 TCATTTGACGGACAAGCTTTTT 57.353 36.364 0.00 0.00 39.77 1.94
1919 4970 4.647424 TTCATTTGACGGACAAGCTTTT 57.353 36.364 0.00 0.00 39.77 2.27
1920 4971 4.037923 ACATTCATTTGACGGACAAGCTTT 59.962 37.500 0.00 0.00 39.77 3.51
1921 4972 3.569701 ACATTCATTTGACGGACAAGCTT 59.430 39.130 0.00 0.00 39.77 3.74
1922 4973 3.149196 ACATTCATTTGACGGACAAGCT 58.851 40.909 0.00 0.00 39.77 3.74
1923 4974 3.559238 ACATTCATTTGACGGACAAGC 57.441 42.857 0.00 0.00 39.77 4.01
1924 4975 5.163854 GGAGTACATTCATTTGACGGACAAG 60.164 44.000 0.00 0.00 39.77 3.16
1925 4976 4.693566 GGAGTACATTCATTTGACGGACAA 59.306 41.667 0.00 0.00 36.65 3.18
1926 4977 4.250464 GGAGTACATTCATTTGACGGACA 58.750 43.478 0.00 0.00 0.00 4.02
1927 4978 3.621715 GGGAGTACATTCATTTGACGGAC 59.378 47.826 0.00 0.00 0.00 4.79
1928 4979 3.517901 AGGGAGTACATTCATTTGACGGA 59.482 43.478 0.00 0.00 0.00 4.69
1929 4980 3.871594 GAGGGAGTACATTCATTTGACGG 59.128 47.826 0.00 0.00 0.00 4.79
1930 4981 3.871594 GGAGGGAGTACATTCATTTGACG 59.128 47.826 0.00 0.00 0.00 4.35
1931 4982 4.843728 TGGAGGGAGTACATTCATTTGAC 58.156 43.478 0.00 0.00 0.00 3.18
1932 4983 5.429762 AGATGGAGGGAGTACATTCATTTGA 59.570 40.000 0.00 0.00 0.00 2.69
1933 4984 5.688807 AGATGGAGGGAGTACATTCATTTG 58.311 41.667 0.00 0.00 0.00 2.32
1934 4985 5.983333 AGATGGAGGGAGTACATTCATTT 57.017 39.130 0.00 0.00 0.00 2.32
1935 4986 5.983333 AAGATGGAGGGAGTACATTCATT 57.017 39.130 0.00 0.00 0.00 2.57
1936 4987 7.451731 TTTAAGATGGAGGGAGTACATTCAT 57.548 36.000 0.00 0.00 0.00 2.57
1937 4988 6.884472 TTTAAGATGGAGGGAGTACATTCA 57.116 37.500 0.00 0.00 0.00 2.57
1938 4989 8.753497 AATTTTAAGATGGAGGGAGTACATTC 57.247 34.615 0.00 0.00 0.00 2.67
1939 4990 8.560903 AGAATTTTAAGATGGAGGGAGTACATT 58.439 33.333 0.00 0.00 0.00 2.71
1940 4991 8.107196 AGAATTTTAAGATGGAGGGAGTACAT 57.893 34.615 0.00 0.00 0.00 2.29
1941 4992 7.510675 AGAATTTTAAGATGGAGGGAGTACA 57.489 36.000 0.00 0.00 0.00 2.90
1942 4993 7.829706 ACAAGAATTTTAAGATGGAGGGAGTAC 59.170 37.037 0.00 0.00 0.00 2.73
1943 4994 7.928873 ACAAGAATTTTAAGATGGAGGGAGTA 58.071 34.615 0.00 0.00 0.00 2.59
1944 4995 6.794534 ACAAGAATTTTAAGATGGAGGGAGT 58.205 36.000 0.00 0.00 0.00 3.85
1945 4996 7.115414 AGACAAGAATTTTAAGATGGAGGGAG 58.885 38.462 0.00 0.00 0.00 4.30
1946 4997 7.032598 AGACAAGAATTTTAAGATGGAGGGA 57.967 36.000 0.00 0.00 0.00 4.20
1947 4998 7.709149 AAGACAAGAATTTTAAGATGGAGGG 57.291 36.000 0.00 0.00 0.00 4.30
1948 4999 9.672673 TCTAAGACAAGAATTTTAAGATGGAGG 57.327 33.333 0.00 0.00 0.00 4.30
1998 5049 9.578439 GGATGTATCTAACACTAAAACGTAACT 57.422 33.333 0.00 0.00 42.09 2.24
1999 5050 8.526681 CGGATGTATCTAACACTAAAACGTAAC 58.473 37.037 0.00 0.00 42.09 2.50
2000 5051 8.243426 ACGGATGTATCTAACACTAAAACGTAA 58.757 33.333 0.00 0.00 42.09 3.18
2001 5052 7.761409 ACGGATGTATCTAACACTAAAACGTA 58.239 34.615 0.00 0.00 42.09 3.57
2002 5053 6.624423 ACGGATGTATCTAACACTAAAACGT 58.376 36.000 0.00 0.00 42.09 3.99
2003 5054 8.688184 CATACGGATGTATCTAACACTAAAACG 58.312 37.037 0.00 0.00 42.09 3.60
2004 5055 9.525409 ACATACGGATGTATCTAACACTAAAAC 57.475 33.333 12.79 0.00 44.77 2.43
2022 5073 9.932207 TTCTTGTCTTAGATTTTTACATACGGA 57.068 29.630 0.00 0.00 0.00 4.69
2033 5084 9.720769 TCGTCCTAAAATTCTTGTCTTAGATTT 57.279 29.630 0.00 0.00 0.00 2.17
2034 5085 9.720769 TTCGTCCTAAAATTCTTGTCTTAGATT 57.279 29.630 0.00 0.00 0.00 2.40
2035 5086 9.372369 CTTCGTCCTAAAATTCTTGTCTTAGAT 57.628 33.333 0.00 0.00 0.00 1.98
2036 5087 7.817962 CCTTCGTCCTAAAATTCTTGTCTTAGA 59.182 37.037 0.00 0.00 0.00 2.10
2037 5088 7.064728 CCCTTCGTCCTAAAATTCTTGTCTTAG 59.935 40.741 0.00 0.00 0.00 2.18
2038 5089 6.877322 CCCTTCGTCCTAAAATTCTTGTCTTA 59.123 38.462 0.00 0.00 0.00 2.10
2039 5090 5.705905 CCCTTCGTCCTAAAATTCTTGTCTT 59.294 40.000 0.00 0.00 0.00 3.01
2040 5091 5.012768 TCCCTTCGTCCTAAAATTCTTGTCT 59.987 40.000 0.00 0.00 0.00 3.41
2041 5092 5.243207 TCCCTTCGTCCTAAAATTCTTGTC 58.757 41.667 0.00 0.00 0.00 3.18
2042 5093 5.221864 ACTCCCTTCGTCCTAAAATTCTTGT 60.222 40.000 0.00 0.00 0.00 3.16
2043 5094 5.246307 ACTCCCTTCGTCCTAAAATTCTTG 58.754 41.667 0.00 0.00 0.00 3.02
2044 5095 5.500546 ACTCCCTTCGTCCTAAAATTCTT 57.499 39.130 0.00 0.00 0.00 2.52
2045 5096 6.612049 AGATACTCCCTTCGTCCTAAAATTCT 59.388 38.462 0.00 0.00 0.00 2.40
2046 5097 6.818233 AGATACTCCCTTCGTCCTAAAATTC 58.182 40.000 0.00 0.00 0.00 2.17
2047 5098 6.809976 AGATACTCCCTTCGTCCTAAAATT 57.190 37.500 0.00 0.00 0.00 1.82
2048 5099 6.015265 GCTAGATACTCCCTTCGTCCTAAAAT 60.015 42.308 0.00 0.00 0.00 1.82
2049 5100 5.301298 GCTAGATACTCCCTTCGTCCTAAAA 59.699 44.000 0.00 0.00 0.00 1.52
2050 5101 4.826183 GCTAGATACTCCCTTCGTCCTAAA 59.174 45.833 0.00 0.00 0.00 1.85
2051 5102 4.141321 TGCTAGATACTCCCTTCGTCCTAA 60.141 45.833 0.00 0.00 0.00 2.69
2052 5103 3.393609 TGCTAGATACTCCCTTCGTCCTA 59.606 47.826 0.00 0.00 0.00 2.94
2053 5104 2.175069 TGCTAGATACTCCCTTCGTCCT 59.825 50.000 0.00 0.00 0.00 3.85
2054 5105 2.293955 GTGCTAGATACTCCCTTCGTCC 59.706 54.545 0.00 0.00 0.00 4.79
2055 5106 2.293955 GGTGCTAGATACTCCCTTCGTC 59.706 54.545 0.00 0.00 0.00 4.20
2056 5107 2.308690 GGTGCTAGATACTCCCTTCGT 58.691 52.381 0.00 0.00 0.00 3.85
2057 5108 2.307768 TGGTGCTAGATACTCCCTTCG 58.692 52.381 0.00 0.00 0.00 3.79
2058 5109 4.755266 TTTGGTGCTAGATACTCCCTTC 57.245 45.455 0.00 0.00 0.00 3.46
2059 5110 5.717119 AATTTGGTGCTAGATACTCCCTT 57.283 39.130 0.00 0.00 0.00 3.95
2060 5111 5.905913 ACTAATTTGGTGCTAGATACTCCCT 59.094 40.000 0.00 0.00 0.00 4.20
2061 5112 5.992217 CACTAATTTGGTGCTAGATACTCCC 59.008 44.000 0.00 0.00 0.00 4.30
2062 5113 6.583562 ACACTAATTTGGTGCTAGATACTCC 58.416 40.000 12.28 0.00 38.14 3.85
2063 5114 9.250624 CTAACACTAATTTGGTGCTAGATACTC 57.749 37.037 14.68 0.00 36.21 2.59
2064 5115 8.978472 TCTAACACTAATTTGGTGCTAGATACT 58.022 33.333 17.17 0.00 37.42 2.12
2065 5116 9.765795 ATCTAACACTAATTTGGTGCTAGATAC 57.234 33.333 25.21 0.00 44.35 2.24
2091 5142 9.586732 CCCAAGTTTATCCCTCAAATGAATATA 57.413 33.333 0.00 0.00 0.00 0.86
2092 5143 8.288812 TCCCAAGTTTATCCCTCAAATGAATAT 58.711 33.333 0.00 0.00 0.00 1.28
2093 5144 7.559897 GTCCCAAGTTTATCCCTCAAATGAATA 59.440 37.037 0.00 0.00 0.00 1.75
2094 5145 6.381133 GTCCCAAGTTTATCCCTCAAATGAAT 59.619 38.462 0.00 0.00 0.00 2.57
2095 5146 5.714806 GTCCCAAGTTTATCCCTCAAATGAA 59.285 40.000 0.00 0.00 0.00 2.57
2096 5147 5.222233 TGTCCCAAGTTTATCCCTCAAATGA 60.222 40.000 0.00 0.00 0.00 2.57
2097 5148 5.016173 TGTCCCAAGTTTATCCCTCAAATG 58.984 41.667 0.00 0.00 0.00 2.32
2098 5149 5.269554 TGTCCCAAGTTTATCCCTCAAAT 57.730 39.130 0.00 0.00 0.00 2.32
2099 5150 4.733077 TGTCCCAAGTTTATCCCTCAAA 57.267 40.909 0.00 0.00 0.00 2.69
2100 5151 4.733077 TTGTCCCAAGTTTATCCCTCAA 57.267 40.909 0.00 0.00 0.00 3.02
2101 5152 4.733077 TTTGTCCCAAGTTTATCCCTCA 57.267 40.909 0.00 0.00 0.00 3.86
2102 5153 6.605471 AAATTTGTCCCAAGTTTATCCCTC 57.395 37.500 0.00 0.00 0.00 4.30
2103 5154 7.387265 AAAAATTTGTCCCAAGTTTATCCCT 57.613 32.000 0.00 0.00 0.00 4.20
2104 5155 6.367695 CGAAAAATTTGTCCCAAGTTTATCCC 59.632 38.462 2.68 0.00 0.00 3.85
2105 5156 6.367695 CCGAAAAATTTGTCCCAAGTTTATCC 59.632 38.462 2.68 0.00 0.00 2.59
2106 5157 7.115805 GTCCGAAAAATTTGTCCCAAGTTTATC 59.884 37.037 2.68 0.00 0.00 1.75
2107 5158 6.926826 GTCCGAAAAATTTGTCCCAAGTTTAT 59.073 34.615 2.68 0.00 0.00 1.40
2108 5159 6.127423 TGTCCGAAAAATTTGTCCCAAGTTTA 60.127 34.615 2.68 0.00 0.00 2.01
2109 5160 5.113383 GTCCGAAAAATTTGTCCCAAGTTT 58.887 37.500 2.68 0.00 0.00 2.66
2110 5161 4.160626 TGTCCGAAAAATTTGTCCCAAGTT 59.839 37.500 2.68 0.00 0.00 2.66
2111 5162 3.702045 TGTCCGAAAAATTTGTCCCAAGT 59.298 39.130 2.68 0.00 0.00 3.16
2112 5163 4.037446 TCTGTCCGAAAAATTTGTCCCAAG 59.963 41.667 2.68 0.00 0.00 3.61
2113 5164 3.954904 TCTGTCCGAAAAATTTGTCCCAA 59.045 39.130 2.68 0.00 0.00 4.12
2114 5165 3.556999 TCTGTCCGAAAAATTTGTCCCA 58.443 40.909 2.68 0.00 0.00 4.37
2115 5166 3.057526 CCTCTGTCCGAAAAATTTGTCCC 60.058 47.826 2.68 0.00 0.00 4.46
2116 5167 3.057526 CCCTCTGTCCGAAAAATTTGTCC 60.058 47.826 2.68 0.00 0.00 4.02
2117 5168 3.818773 TCCCTCTGTCCGAAAAATTTGTC 59.181 43.478 0.00 0.00 0.00 3.18
2118 5169 3.821033 CTCCCTCTGTCCGAAAAATTTGT 59.179 43.478 0.00 0.00 0.00 2.83
2119 5170 3.821033 ACTCCCTCTGTCCGAAAAATTTG 59.179 43.478 0.00 0.00 0.00 2.32
2120 5171 4.100279 ACTCCCTCTGTCCGAAAAATTT 57.900 40.909 0.00 0.00 0.00 1.82
2121 5172 3.790089 ACTCCCTCTGTCCGAAAAATT 57.210 42.857 0.00 0.00 0.00 1.82
2122 5173 4.081586 GTCTACTCCCTCTGTCCGAAAAAT 60.082 45.833 0.00 0.00 0.00 1.82
2123 5174 3.257624 GTCTACTCCCTCTGTCCGAAAAA 59.742 47.826 0.00 0.00 0.00 1.94
2124 5175 2.824341 GTCTACTCCCTCTGTCCGAAAA 59.176 50.000 0.00 0.00 0.00 2.29
2125 5176 2.224942 TGTCTACTCCCTCTGTCCGAAA 60.225 50.000 0.00 0.00 0.00 3.46
2126 5177 1.353358 TGTCTACTCCCTCTGTCCGAA 59.647 52.381 0.00 0.00 0.00 4.30
2127 5178 0.989602 TGTCTACTCCCTCTGTCCGA 59.010 55.000 0.00 0.00 0.00 4.55
2128 5179 1.384525 CTGTCTACTCCCTCTGTCCG 58.615 60.000 0.00 0.00 0.00 4.79
2129 5180 1.285373 TCCTGTCTACTCCCTCTGTCC 59.715 57.143 0.00 0.00 0.00 4.02
2130 5181 2.240160 TCTCCTGTCTACTCCCTCTGTC 59.760 54.545 0.00 0.00 0.00 3.51
2131 5182 2.280103 TCTCCTGTCTACTCCCTCTGT 58.720 52.381 0.00 0.00 0.00 3.41
2132 5183 3.221771 CATCTCCTGTCTACTCCCTCTG 58.778 54.545 0.00 0.00 0.00 3.35
2133 5184 2.176798 CCATCTCCTGTCTACTCCCTCT 59.823 54.545 0.00 0.00 0.00 3.69
2134 5185 2.175931 TCCATCTCCTGTCTACTCCCTC 59.824 54.545 0.00 0.00 0.00 4.30
2135 5186 2.091555 GTCCATCTCCTGTCTACTCCCT 60.092 54.545 0.00 0.00 0.00 4.20
2136 5187 2.091555 AGTCCATCTCCTGTCTACTCCC 60.092 54.545 0.00 0.00 0.00 4.30
2137 5188 3.306472 AGTCCATCTCCTGTCTACTCC 57.694 52.381 0.00 0.00 0.00 3.85
2138 5189 3.181480 GCAAGTCCATCTCCTGTCTACTC 60.181 52.174 0.00 0.00 0.00 2.59
2139 5190 2.763448 GCAAGTCCATCTCCTGTCTACT 59.237 50.000 0.00 0.00 0.00 2.57
2149 5200 4.401022 TCAAATCTTGTGCAAGTCCATCT 58.599 39.130 11.17 0.00 39.38 2.90
2191 5244 6.849305 CACCTTTTGCTGTAAGTTTAGTAACG 59.151 38.462 0.00 0.00 39.31 3.18
2196 5249 4.825085 TCCCACCTTTTGCTGTAAGTTTAG 59.175 41.667 0.00 0.00 35.30 1.85
2198 5251 3.637769 TCCCACCTTTTGCTGTAAGTTT 58.362 40.909 0.00 0.00 35.30 2.66
2199 5252 3.306472 TCCCACCTTTTGCTGTAAGTT 57.694 42.857 0.00 0.00 35.30 2.66
2202 5255 4.712337 TCTTTTTCCCACCTTTTGCTGTAA 59.288 37.500 0.00 0.00 0.00 2.41
2225 5279 7.538678 GTGAATGCTTAACGAATCTTTTCATGT 59.461 33.333 0.00 0.00 0.00 3.21
2290 5347 2.866762 GTCATCTTGAATAGCGGGACAC 59.133 50.000 0.00 0.00 0.00 3.67
2291 5348 2.499693 TGTCATCTTGAATAGCGGGACA 59.500 45.455 0.00 0.00 0.00 4.02
2292 5349 3.126831 CTGTCATCTTGAATAGCGGGAC 58.873 50.000 0.00 0.00 0.00 4.46
2293 5350 2.103094 CCTGTCATCTTGAATAGCGGGA 59.897 50.000 0.00 0.00 0.00 5.14
2296 5353 3.459232 TCCCTGTCATCTTGAATAGCG 57.541 47.619 0.00 0.00 0.00 4.26
2311 5368 7.161404 TCACGGATCATAGAATTAAATCCCTG 58.839 38.462 0.00 0.00 33.75 4.45
2322 5379 2.029918 CAGGCGATCACGGATCATAGAA 60.030 50.000 12.45 0.00 38.84 2.10
2325 5382 0.603065 CCAGGCGATCACGGATCATA 59.397 55.000 12.45 0.00 38.84 2.15
2329 5386 4.241555 GGCCAGGCGATCACGGAT 62.242 66.667 5.00 0.00 40.15 4.18
2331 5388 4.552365 ATGGCCAGGCGATCACGG 62.552 66.667 13.05 0.00 40.15 4.94
2332 5389 3.274586 CATGGCCAGGCGATCACG 61.275 66.667 13.05 0.00 42.93 4.35
2333 5390 3.589881 GCATGGCCAGGCGATCAC 61.590 66.667 28.54 0.00 0.00 3.06
2334 5391 3.641925 TTGCATGGCCAGGCGATCA 62.642 57.895 34.60 16.93 41.64 2.92
2335 5392 2.829914 TTGCATGGCCAGGCGATC 60.830 61.111 34.60 11.77 41.64 3.69
2336 5393 2.831742 CTTGCATGGCCAGGCGAT 60.832 61.111 34.60 3.66 41.64 4.58
2338 5395 2.963928 TATCCTTGCATGGCCAGGCG 62.964 60.000 34.60 22.35 40.70 5.52
2339 5396 0.541296 ATATCCTTGCATGGCCAGGC 60.541 55.000 34.60 34.60 40.70 4.85
2340 5397 2.005370 AATATCCTTGCATGGCCAGG 57.995 50.000 14.45 14.45 42.04 4.45
2341 5398 3.759581 ACTAATATCCTTGCATGGCCAG 58.240 45.455 13.05 4.54 0.00 4.85
2342 5399 3.882102 ACTAATATCCTTGCATGGCCA 57.118 42.857 8.56 8.56 0.00 5.36
2343 5400 7.112779 ACTTATACTAATATCCTTGCATGGCC 58.887 38.462 13.75 0.00 0.00 5.36
2344 5401 7.824289 TGACTTATACTAATATCCTTGCATGGC 59.176 37.037 13.75 0.00 0.00 4.40
2345 5402 9.896645 ATGACTTATACTAATATCCTTGCATGG 57.103 33.333 12.41 12.41 0.00 3.66
2378 5435 9.422196 GCTTCGTGTGTTGTCTATATTAAAATC 57.578 33.333 0.00 0.00 0.00 2.17
2379 5436 8.941977 TGCTTCGTGTGTTGTCTATATTAAAAT 58.058 29.630 0.00 0.00 0.00 1.82
2380 5437 8.312896 TGCTTCGTGTGTTGTCTATATTAAAA 57.687 30.769 0.00 0.00 0.00 1.52
2381 5438 7.892778 TGCTTCGTGTGTTGTCTATATTAAA 57.107 32.000 0.00 0.00 0.00 1.52
2382 5439 7.892778 TTGCTTCGTGTGTTGTCTATATTAA 57.107 32.000 0.00 0.00 0.00 1.40
2383 5440 7.892778 TTTGCTTCGTGTGTTGTCTATATTA 57.107 32.000 0.00 0.00 0.00 0.98
2384 5441 6.795098 TTTGCTTCGTGTGTTGTCTATATT 57.205 33.333 0.00 0.00 0.00 1.28
2385 5442 6.985188 ATTTGCTTCGTGTGTTGTCTATAT 57.015 33.333 0.00 0.00 0.00 0.86
2386 5443 6.425417 TCAATTTGCTTCGTGTGTTGTCTATA 59.575 34.615 0.00 0.00 0.00 1.31
2387 5444 5.238432 TCAATTTGCTTCGTGTGTTGTCTAT 59.762 36.000 0.00 0.00 0.00 1.98
2388 5445 4.572795 TCAATTTGCTTCGTGTGTTGTCTA 59.427 37.500 0.00 0.00 0.00 2.59
2389 5446 3.376859 TCAATTTGCTTCGTGTGTTGTCT 59.623 39.130 0.00 0.00 0.00 3.41
2390 5447 3.690422 TCAATTTGCTTCGTGTGTTGTC 58.310 40.909 0.00 0.00 0.00 3.18
2391 5448 3.128589 ACTCAATTTGCTTCGTGTGTTGT 59.871 39.130 0.00 0.00 0.00 3.32
2392 5449 3.483196 CACTCAATTTGCTTCGTGTGTTG 59.517 43.478 0.00 0.00 0.00 3.33
2393 5450 3.376859 TCACTCAATTTGCTTCGTGTGTT 59.623 39.130 0.00 0.00 0.00 3.32
2394 5451 2.942376 TCACTCAATTTGCTTCGTGTGT 59.058 40.909 0.00 0.00 0.00 3.72
2395 5452 3.607422 TCACTCAATTTGCTTCGTGTG 57.393 42.857 0.00 0.00 0.00 3.82
2396 5453 3.243068 GGTTCACTCAATTTGCTTCGTGT 60.243 43.478 0.00 0.00 0.00 4.49
2397 5454 3.003689 AGGTTCACTCAATTTGCTTCGTG 59.996 43.478 0.00 0.00 0.00 4.35
2398 5455 3.214328 AGGTTCACTCAATTTGCTTCGT 58.786 40.909 0.00 0.00 0.00 3.85
2399 5456 3.904136 AGGTTCACTCAATTTGCTTCG 57.096 42.857 0.00 0.00 0.00 3.79
2400 5457 5.239525 AGTGTAGGTTCACTCAATTTGCTTC 59.760 40.000 0.00 0.00 44.07 3.86
2401 5458 5.133221 AGTGTAGGTTCACTCAATTTGCTT 58.867 37.500 0.00 0.00 44.07 3.91
2402 5459 4.718961 AGTGTAGGTTCACTCAATTTGCT 58.281 39.130 0.00 0.00 44.07 3.91
2446 5503 9.725019 AGAGATTTCAACACAAACTACATATGA 57.275 29.630 10.38 0.00 0.00 2.15
2507 5564 4.930963 TGGTCGTTAACAAAACTCGTAGA 58.069 39.130 6.39 0.00 0.00 2.59
2508 5565 5.834239 ATGGTCGTTAACAAAACTCGTAG 57.166 39.130 6.39 0.00 0.00 3.51
2509 5566 6.479660 AGAAATGGTCGTTAACAAAACTCGTA 59.520 34.615 6.39 0.00 0.00 3.43
2510 5567 5.295045 AGAAATGGTCGTTAACAAAACTCGT 59.705 36.000 6.39 0.00 0.00 4.18
2511 5568 5.619607 CAGAAATGGTCGTTAACAAAACTCG 59.380 40.000 6.39 0.00 0.00 4.18
2512 5569 5.912955 CCAGAAATGGTCGTTAACAAAACTC 59.087 40.000 6.39 0.00 0.00 3.01
2513 5570 5.358725 ACCAGAAATGGTCGTTAACAAAACT 59.641 36.000 6.39 0.00 37.74 2.66
2514 5571 5.584442 ACCAGAAATGGTCGTTAACAAAAC 58.416 37.500 6.39 0.55 37.74 2.43
2515 5572 5.838531 ACCAGAAATGGTCGTTAACAAAA 57.161 34.783 6.39 0.00 37.74 2.44
2516 5573 5.838531 AACCAGAAATGGTCGTTAACAAA 57.161 34.783 6.39 0.00 42.20 2.83
2517 5574 5.125739 ACAAACCAGAAATGGTCGTTAACAA 59.874 36.000 6.39 0.00 42.20 2.83
2518 5575 4.641094 ACAAACCAGAAATGGTCGTTAACA 59.359 37.500 6.39 0.00 42.20 2.41
2519 5576 5.177725 ACAAACCAGAAATGGTCGTTAAC 57.822 39.130 0.00 0.00 42.20 2.01
2520 5577 6.939132 TTACAAACCAGAAATGGTCGTTAA 57.061 33.333 0.00 0.00 42.20 2.01
2521 5578 6.939132 TTTACAAACCAGAAATGGTCGTTA 57.061 33.333 0.00 0.00 42.20 3.18
2522 5579 5.838531 TTTACAAACCAGAAATGGTCGTT 57.161 34.783 0.00 0.00 42.20 3.85
2523 5580 7.696992 ATATTTACAAACCAGAAATGGTCGT 57.303 32.000 0.00 4.31 42.20 4.34
2524 5581 8.458843 AGAATATTTACAAACCAGAAATGGTCG 58.541 33.333 0.00 0.00 42.20 4.79
2525 5582 9.788960 GAGAATATTTACAAACCAGAAATGGTC 57.211 33.333 0.00 0.00 42.20 4.02
2526 5583 9.308000 TGAGAATATTTACAAACCAGAAATGGT 57.692 29.630 0.00 0.00 45.55 3.55
2543 5600 9.816354 CCAACGGGATTTTATTTTGAGAATATT 57.184 29.630 0.00 0.00 35.59 1.28
2544 5601 8.977412 ACCAACGGGATTTTATTTTGAGAATAT 58.023 29.630 0.00 0.00 38.05 1.28
2545 5602 8.356000 ACCAACGGGATTTTATTTTGAGAATA 57.644 30.769 0.00 0.00 38.05 1.75
2546 5603 7.239763 ACCAACGGGATTTTATTTTGAGAAT 57.760 32.000 0.00 0.00 38.05 2.40
2547 5604 6.658188 ACCAACGGGATTTTATTTTGAGAA 57.342 33.333 0.00 0.00 38.05 2.87
2548 5605 7.762588 TTACCAACGGGATTTTATTTTGAGA 57.237 32.000 0.00 0.00 38.05 3.27
2549 5606 8.868916 CATTTACCAACGGGATTTTATTTTGAG 58.131 33.333 0.00 0.00 38.05 3.02
2550 5607 7.332182 GCATTTACCAACGGGATTTTATTTTGA 59.668 33.333 0.00 0.00 38.05 2.69
2551 5608 7.118390 TGCATTTACCAACGGGATTTTATTTTG 59.882 33.333 0.00 0.00 38.05 2.44
2552 5609 7.162082 TGCATTTACCAACGGGATTTTATTTT 58.838 30.769 0.00 0.00 38.05 1.82
2553 5610 6.702329 TGCATTTACCAACGGGATTTTATTT 58.298 32.000 0.00 0.00 38.05 1.40
2554 5611 6.287589 TGCATTTACCAACGGGATTTTATT 57.712 33.333 0.00 0.00 38.05 1.40
2555 5612 5.923733 TGCATTTACCAACGGGATTTTAT 57.076 34.783 0.00 0.00 38.05 1.40
2556 5613 5.923733 ATGCATTTACCAACGGGATTTTA 57.076 34.783 0.00 0.00 38.05 1.52
2557 5614 4.817318 ATGCATTTACCAACGGGATTTT 57.183 36.364 0.00 0.00 38.05 1.82
2558 5615 5.654650 TCTTATGCATTTACCAACGGGATTT 59.345 36.000 3.54 0.00 38.05 2.17
2559 5616 5.197451 TCTTATGCATTTACCAACGGGATT 58.803 37.500 3.54 0.00 38.05 3.01
2560 5617 4.787551 TCTTATGCATTTACCAACGGGAT 58.212 39.130 3.54 0.00 38.05 3.85
2561 5618 4.080807 TCTCTTATGCATTTACCAACGGGA 60.081 41.667 3.54 0.00 38.05 5.14
2562 5619 4.196193 TCTCTTATGCATTTACCAACGGG 58.804 43.478 3.54 0.00 41.29 5.28
2563 5620 5.811399 TTCTCTTATGCATTTACCAACGG 57.189 39.130 3.54 0.00 0.00 4.44
2564 5621 7.081349 TGTTTTCTCTTATGCATTTACCAACG 58.919 34.615 3.54 0.00 0.00 4.10
2565 5622 8.810652 TTGTTTTCTCTTATGCATTTACCAAC 57.189 30.769 3.54 0.99 0.00 3.77
2566 5623 9.995003 ATTTGTTTTCTCTTATGCATTTACCAA 57.005 25.926 3.54 0.00 0.00 3.67
2567 5624 9.421806 CATTTGTTTTCTCTTATGCATTTACCA 57.578 29.630 3.54 0.00 0.00 3.25
2568 5625 9.423061 ACATTTGTTTTCTCTTATGCATTTACC 57.577 29.630 3.54 0.00 0.00 2.85
2571 5628 8.284693 GCAACATTTGTTTTCTCTTATGCATTT 58.715 29.630 3.54 0.00 35.83 2.32
2572 5629 7.441760 TGCAACATTTGTTTTCTCTTATGCATT 59.558 29.630 3.54 0.00 35.83 3.56
2573 5630 6.930164 TGCAACATTTGTTTTCTCTTATGCAT 59.070 30.769 3.79 3.79 35.83 3.96
2574 5631 6.279123 TGCAACATTTGTTTTCTCTTATGCA 58.721 32.000 0.00 0.00 35.83 3.96
2575 5632 6.768029 TGCAACATTTGTTTTCTCTTATGC 57.232 33.333 0.00 0.00 35.83 3.14
2576 5633 8.270799 CAGTTGCAACATTTGTTTTCTCTTATG 58.729 33.333 30.11 10.29 35.83 1.90
2577 5634 8.196771 TCAGTTGCAACATTTGTTTTCTCTTAT 58.803 29.630 30.11 1.25 35.83 1.73
2578 5635 7.542890 TCAGTTGCAACATTTGTTTTCTCTTA 58.457 30.769 30.11 0.00 35.83 2.10
2579 5636 6.397272 TCAGTTGCAACATTTGTTTTCTCTT 58.603 32.000 30.11 2.33 35.83 2.85
2580 5637 5.964758 TCAGTTGCAACATTTGTTTTCTCT 58.035 33.333 30.11 2.79 35.83 3.10
2581 5638 6.090628 TGTTCAGTTGCAACATTTGTTTTCTC 59.909 34.615 30.11 8.79 35.83 2.87
2582 5639 5.931146 TGTTCAGTTGCAACATTTGTTTTCT 59.069 32.000 30.11 3.54 35.83 2.52
2583 5640 6.163159 TGTTCAGTTGCAACATTTGTTTTC 57.837 33.333 30.11 11.16 35.83 2.29
2584 5641 6.740411 ATGTTCAGTTGCAACATTTGTTTT 57.260 29.167 30.11 5.09 40.83 2.43
2591 5648 4.379652 GGGAAAATGTTCAGTTGCAACAT 58.620 39.130 30.11 13.51 44.67 2.71
2592 5649 3.431486 GGGGAAAATGTTCAGTTGCAACA 60.431 43.478 30.11 11.60 38.12 3.33
2593 5650 3.130633 GGGGAAAATGTTCAGTTGCAAC 58.869 45.455 22.17 22.17 35.25 4.17
2594 5651 2.768527 TGGGGAAAATGTTCAGTTGCAA 59.231 40.909 0.00 0.00 35.25 4.08
2595 5652 2.364970 CTGGGGAAAATGTTCAGTTGCA 59.635 45.455 0.00 0.00 35.25 4.08
2596 5653 2.289010 CCTGGGGAAAATGTTCAGTTGC 60.289 50.000 0.00 0.00 35.25 4.17
2597 5654 2.289010 GCCTGGGGAAAATGTTCAGTTG 60.289 50.000 0.00 0.00 35.25 3.16
2598 5655 1.970640 GCCTGGGGAAAATGTTCAGTT 59.029 47.619 0.00 0.00 35.25 3.16
2599 5656 1.147817 AGCCTGGGGAAAATGTTCAGT 59.852 47.619 0.00 0.00 35.25 3.41
2600 5657 1.547372 CAGCCTGGGGAAAATGTTCAG 59.453 52.381 0.00 0.00 35.25 3.02
2601 5658 1.631405 CAGCCTGGGGAAAATGTTCA 58.369 50.000 0.00 0.00 35.25 3.18
2602 5659 0.897621 CCAGCCTGGGGAAAATGTTC 59.102 55.000 1.63 0.00 32.67 3.18
2603 5660 0.190815 ACCAGCCTGGGGAAAATGTT 59.809 50.000 16.70 0.00 43.37 2.71
2604 5661 0.542702 CACCAGCCTGGGGAAAATGT 60.543 55.000 16.70 0.00 46.22 2.71
2605 5662 2.279842 CACCAGCCTGGGGAAAATG 58.720 57.895 16.70 0.00 46.22 2.32
2606 5663 4.872293 CACCAGCCTGGGGAAAAT 57.128 55.556 16.70 0.00 46.22 1.82
2611 5668 3.402681 ACGATCACCAGCCTGGGG 61.403 66.667 16.70 12.14 44.11 4.96
2612 5669 2.124983 CACGATCACCAGCCTGGG 60.125 66.667 16.70 4.22 43.37 4.45
2613 5670 2.124983 CCACGATCACCAGCCTGG 60.125 66.667 9.83 9.83 45.02 4.45
2614 5671 1.021390 GTTCCACGATCACCAGCCTG 61.021 60.000 0.00 0.00 0.00 4.85
2615 5672 1.296715 GTTCCACGATCACCAGCCT 59.703 57.895 0.00 0.00 0.00 4.58
2616 5673 2.100631 CGTTCCACGATCACCAGCC 61.101 63.158 0.00 0.00 46.05 4.85
2617 5674 1.080093 TCGTTCCACGATCACCAGC 60.080 57.895 0.00 0.00 46.73 4.85
2626 5683 0.719465 GCAGTACCATTCGTTCCACG 59.281 55.000 0.00 0.00 44.19 4.94
2627 5684 2.094762 AGCAGTACCATTCGTTCCAC 57.905 50.000 0.00 0.00 0.00 4.02
2628 5685 2.563620 TGTAGCAGTACCATTCGTTCCA 59.436 45.455 0.00 0.00 0.00 3.53
2629 5686 2.928116 GTGTAGCAGTACCATTCGTTCC 59.072 50.000 0.00 0.00 0.00 3.62
2630 5687 2.597305 CGTGTAGCAGTACCATTCGTTC 59.403 50.000 0.00 0.00 0.00 3.95
2631 5688 2.229543 TCGTGTAGCAGTACCATTCGTT 59.770 45.455 0.00 0.00 0.00 3.85
2632 5689 1.814394 TCGTGTAGCAGTACCATTCGT 59.186 47.619 0.00 0.00 0.00 3.85
2633 5690 2.554806 TCGTGTAGCAGTACCATTCG 57.445 50.000 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.