Multiple sequence alignment - TraesCS2D01G453500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G453500 chr2D 100.000 2769 0 0 1 2769 562352563 562355331 0.000000e+00 5114.0
1 TraesCS2D01G453500 chr2D 80.999 1121 79 55 704 1758 562340587 562341639 0.000000e+00 767.0
2 TraesCS2D01G453500 chr2D 82.099 905 74 43 1135 2000 562268051 562268906 0.000000e+00 693.0
3 TraesCS2D01G453500 chr2D 81.854 766 74 24 969 1704 562235171 562235901 3.970000e-163 584.0
4 TraesCS2D01G453500 chr2D 87.411 421 24 6 969 1389 562308029 562308420 9.040000e-125 457.0
5 TraesCS2D01G453500 chr2D 88.822 331 29 6 605 934 562306321 562306644 1.540000e-107 399.0
6 TraesCS2D01G453500 chr2D 79.083 545 53 28 1382 1876 562315798 562316331 4.450000e-83 318.0
7 TraesCS2D01G453500 chr2D 92.891 211 15 0 1087 1297 562449260 562449470 9.630000e-80 307.0
8 TraesCS2D01G453500 chr2D 91.441 222 18 1 1087 1308 562581293 562581513 1.250000e-78 303.0
9 TraesCS2D01G453500 chr2D 78.800 500 65 24 1087 1558 562362532 562363018 5.800000e-77 298.0
10 TraesCS2D01G453500 chr2D 83.333 162 16 5 1763 1913 562235920 562236081 3.720000e-29 139.0
11 TraesCS2D01G453500 chr2D 86.957 115 12 1 112 223 562340199 562340313 2.900000e-25 126.0
12 TraesCS2D01G453500 chr2D 92.000 75 3 2 970 1044 562267930 562268001 4.880000e-18 102.0
13 TraesCS2D01G453500 chr2B 86.390 1396 94 31 659 2003 672059113 672060463 0.000000e+00 1437.0
14 TraesCS2D01G453500 chr2B 92.447 609 46 0 2155 2763 706187473 706188081 0.000000e+00 870.0
15 TraesCS2D01G453500 chr2B 83.254 836 69 32 767 1558 671909879 671910687 0.000000e+00 702.0
16 TraesCS2D01G453500 chr2B 82.155 891 77 44 555 1413 672022693 672023533 0.000000e+00 689.0
17 TraesCS2D01G453500 chr2B 89.171 434 34 6 1634 2058 672030829 672031258 1.890000e-146 529.0
18 TraesCS2D01G453500 chr2B 92.405 79 6 0 1479 1557 242549690 242549612 2.250000e-21 113.0
19 TraesCS2D01G453500 chr2B 91.228 57 2 3 2051 2107 40858778 40858831 1.060000e-09 75.0
20 TraesCS2D01G453500 chr2A 83.198 1482 122 56 557 1986 702956362 702957768 0.000000e+00 1240.0
21 TraesCS2D01G453500 chr2A 76.918 1382 180 69 555 1876 702939725 702941027 0.000000e+00 656.0
22 TraesCS2D01G453500 chr2A 85.900 617 41 17 1103 1704 702951021 702951606 1.410000e-172 616.0
23 TraesCS2D01G453500 chr2A 84.490 245 18 13 565 806 702948694 702948921 9.980000e-55 224.0
24 TraesCS2D01G453500 chr2A 90.625 96 9 0 112 207 702956097 702956192 8.050000e-26 128.0
25 TraesCS2D01G453500 chr2A 79.870 154 23 3 1418 1563 703095769 703095922 3.770000e-19 106.0
26 TraesCS2D01G453500 chr2A 97.436 39 1 0 811 849 702948905 702948943 1.780000e-07 67.6
27 TraesCS2D01G453500 chr6D 98.211 615 11 0 2155 2769 386436575 386435961 0.000000e+00 1075.0
28 TraesCS2D01G453500 chr6D 92.683 615 44 1 2155 2769 412482000 412481387 0.000000e+00 885.0
29 TraesCS2D01G453500 chr6D 96.000 50 1 1 2043 2092 313153074 313153026 2.290000e-11 80.5
30 TraesCS2D01G453500 chr4D 97.886 615 13 0 2155 2769 95047715 95048329 0.000000e+00 1064.0
31 TraesCS2D01G453500 chr4D 90.816 98 9 0 1 98 370368067 370368164 6.220000e-27 132.0
32 TraesCS2D01G453500 chr4D 92.188 64 2 3 2054 2115 121077002 121076940 1.370000e-13 87.9
33 TraesCS2D01G453500 chr4D 89.062 64 2 3 2048 2107 111940960 111941022 1.060000e-09 75.0
34 TraesCS2D01G453500 chr1B 96.242 612 23 0 2155 2766 558510932 558511543 0.000000e+00 1003.0
35 TraesCS2D01G453500 chr1B 90.476 84 8 0 1475 1558 575123182 575123265 8.110000e-21 111.0
36 TraesCS2D01G453500 chr5A 95.942 616 24 1 2155 2769 479400400 479399785 0.000000e+00 998.0
37 TraesCS2D01G453500 chr5A 93.496 615 39 1 2155 2769 524060681 524060068 0.000000e+00 913.0
38 TraesCS2D01G453500 chr5A 94.340 53 2 1 2051 2103 622779224 622779173 2.290000e-11 80.5
39 TraesCS2D01G453500 chr7D 95.772 615 26 0 2155 2769 192079028 192078414 0.000000e+00 992.0
40 TraesCS2D01G453500 chr6A 95.425 612 25 1 2155 2766 23429421 23430029 0.000000e+00 972.0
41 TraesCS2D01G453500 chr5D 85.455 220 8 8 221 433 526822870 526823072 1.010000e-49 207.0
42 TraesCS2D01G453500 chr3D 89.247 93 10 0 1471 1563 66247606 66247698 1.740000e-22 117.0
43 TraesCS2D01G453500 chr3B 87.755 98 12 0 1 98 713201344 713201247 6.270000e-22 115.0
44 TraesCS2D01G453500 chr3B 96.078 51 0 1 2052 2102 829248447 829248495 6.360000e-12 82.4
45 TraesCS2D01G453500 chr3B 94.231 52 3 0 2041 2092 828548590 828548641 2.290000e-11 80.5
46 TraesCS2D01G453500 chr7B 96.491 57 1 1 2051 2106 648760058 648760002 2.940000e-15 93.5
47 TraesCS2D01G453500 chr7B 79.798 99 16 3 3 98 721809912 721810009 4.950000e-08 69.4
48 TraesCS2D01G453500 chr1D 88.406 69 2 6 2025 2091 415628129 415628065 8.220000e-11 78.7
49 TraesCS2D01G453500 chr4B 95.238 42 2 0 2 43 497237733 497237692 1.780000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G453500 chr2D 562352563 562355331 2768 False 5114.000000 5114 100.000000 1 2769 1 chr2D.!!$F2 2768
1 TraesCS2D01G453500 chr2D 562340199 562341639 1440 False 446.500000 767 83.978000 112 1758 2 chr2D.!!$F9 1646
2 TraesCS2D01G453500 chr2D 562306321 562308420 2099 False 428.000000 457 88.116500 605 1389 2 chr2D.!!$F8 784
3 TraesCS2D01G453500 chr2D 562267930 562268906 976 False 397.500000 693 87.049500 970 2000 2 chr2D.!!$F7 1030
4 TraesCS2D01G453500 chr2D 562235171 562236081 910 False 361.500000 584 82.593500 969 1913 2 chr2D.!!$F6 944
5 TraesCS2D01G453500 chr2D 562315798 562316331 533 False 318.000000 318 79.083000 1382 1876 1 chr2D.!!$F1 494
6 TraesCS2D01G453500 chr2B 672059113 672060463 1350 False 1437.000000 1437 86.390000 659 2003 1 chr2B.!!$F5 1344
7 TraesCS2D01G453500 chr2B 706187473 706188081 608 False 870.000000 870 92.447000 2155 2763 1 chr2B.!!$F6 608
8 TraesCS2D01G453500 chr2B 671909879 671910687 808 False 702.000000 702 83.254000 767 1558 1 chr2B.!!$F2 791
9 TraesCS2D01G453500 chr2B 672022693 672023533 840 False 689.000000 689 82.155000 555 1413 1 chr2B.!!$F3 858
10 TraesCS2D01G453500 chr2A 702956097 702957768 1671 False 684.000000 1240 86.911500 112 1986 2 chr2A.!!$F4 1874
11 TraesCS2D01G453500 chr2A 702939725 702941027 1302 False 656.000000 656 76.918000 555 1876 1 chr2A.!!$F1 1321
12 TraesCS2D01G453500 chr2A 702948694 702951606 2912 False 302.533333 616 89.275333 565 1704 3 chr2A.!!$F3 1139
13 TraesCS2D01G453500 chr6D 386435961 386436575 614 True 1075.000000 1075 98.211000 2155 2769 1 chr6D.!!$R2 614
14 TraesCS2D01G453500 chr6D 412481387 412482000 613 True 885.000000 885 92.683000 2155 2769 1 chr6D.!!$R3 614
15 TraesCS2D01G453500 chr4D 95047715 95048329 614 False 1064.000000 1064 97.886000 2155 2769 1 chr4D.!!$F1 614
16 TraesCS2D01G453500 chr1B 558510932 558511543 611 False 1003.000000 1003 96.242000 2155 2766 1 chr1B.!!$F1 611
17 TraesCS2D01G453500 chr5A 479399785 479400400 615 True 998.000000 998 95.942000 2155 2769 1 chr5A.!!$R1 614
18 TraesCS2D01G453500 chr5A 524060068 524060681 613 True 913.000000 913 93.496000 2155 2769 1 chr5A.!!$R2 614
19 TraesCS2D01G453500 chr7D 192078414 192079028 614 True 992.000000 992 95.772000 2155 2769 1 chr7D.!!$R1 614
20 TraesCS2D01G453500 chr6A 23429421 23430029 608 False 972.000000 972 95.425000 2155 2766 1 chr6A.!!$F1 611

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 313 0.040067 ACCAGTCGGTTACGTCGTTC 60.04 55.0 1.78 0.0 46.31 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2077 5620 0.234884 CCTCCGTGTCAAAAACGCTC 59.765 55.0 0.0 0.0 39.69 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.987404 CTTTCCCTCCAACGCTGG 58.013 61.111 0.00 0.00 45.08 4.85
30 31 4.135493 GCTGGAGCGCGTCGAAAC 62.135 66.667 8.43 0.00 0.00 2.78
48 49 4.074634 GTCCCGCGCGCGTTAAAA 62.075 61.111 45.51 25.94 37.81 1.52
49 50 3.344215 TCCCGCGCGCGTTAAAAA 61.344 55.556 45.51 24.23 37.81 1.94
50 51 3.160756 CCCGCGCGCGTTAAAAAC 61.161 61.111 45.51 11.65 37.81 2.43
51 52 2.127534 CCGCGCGCGTTAAAAACT 60.128 55.556 45.51 0.00 37.81 2.66
52 53 2.135591 CCGCGCGCGTTAAAAACTC 61.136 57.895 45.51 10.04 37.81 3.01
53 54 2.466099 CGCGCGCGTTAAAAACTCG 61.466 57.895 42.49 18.55 42.10 4.18
54 55 1.154800 GCGCGCGTTAAAAACTCGA 60.155 52.632 32.35 0.00 41.77 4.04
55 56 0.517742 GCGCGCGTTAAAAACTCGAT 60.518 50.000 32.35 0.00 41.77 3.59
56 57 1.860709 CGCGCGTTAAAAACTCGATT 58.139 45.000 24.19 0.00 41.77 3.34
57 58 2.227556 CGCGCGTTAAAAACTCGATTT 58.772 42.857 24.19 0.00 41.77 2.17
58 59 3.397441 CGCGCGTTAAAAACTCGATTTA 58.603 40.909 24.19 0.00 41.77 1.40
59 60 3.231401 CGCGCGTTAAAAACTCGATTTAC 59.769 43.478 24.19 0.00 41.77 2.01
60 61 3.535674 GCGCGTTAAAAACTCGATTTACC 59.464 43.478 8.43 0.00 41.77 2.85
61 62 3.769964 CGCGTTAAAAACTCGATTTACCG 59.230 43.478 0.00 3.46 41.77 4.02
62 63 3.535674 GCGTTAAAAACTCGATTTACCGC 59.464 43.478 13.57 13.57 43.37 5.68
63 64 4.700332 CGTTAAAAACTCGATTTACCGCA 58.300 39.130 0.00 0.00 0.00 5.69
64 65 4.546941 CGTTAAAAACTCGATTTACCGCAC 59.453 41.667 0.00 0.00 0.00 5.34
65 66 2.867456 AAAACTCGATTTACCGCACG 57.133 45.000 0.00 0.00 0.00 5.34
66 67 0.441145 AAACTCGATTTACCGCACGC 59.559 50.000 0.00 0.00 0.00 5.34
67 68 1.680105 AACTCGATTTACCGCACGCG 61.680 55.000 3.53 3.53 39.44 6.01
68 69 3.472542 CTCGATTTACCGCACGCGC 62.473 63.158 5.73 0.00 38.24 6.86
87 88 3.977244 CCTTTTGCCGCGGCTGTT 61.977 61.111 45.79 0.00 42.51 3.16
88 89 2.730604 CTTTTGCCGCGGCTGTTG 60.731 61.111 45.79 29.93 42.51 3.33
89 90 4.277593 TTTTGCCGCGGCTGTTGG 62.278 61.111 45.79 12.08 42.51 3.77
94 95 3.197790 CCGCGGCTGTTGGAGATG 61.198 66.667 14.67 0.00 0.00 2.90
95 96 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
96 97 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
97 98 2.467826 GCGGCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 0.00 4.26
98 99 2.169789 CGGCTGTTGGAGATGCTCG 61.170 63.158 0.00 0.00 0.00 5.03
99 100 1.817099 GGCTGTTGGAGATGCTCGG 60.817 63.158 0.00 0.00 0.00 4.63
100 101 1.219124 GCTGTTGGAGATGCTCGGA 59.781 57.895 0.00 0.00 0.00 4.55
101 102 0.809241 GCTGTTGGAGATGCTCGGAG 60.809 60.000 0.00 0.00 0.00 4.63
102 103 0.809241 CTGTTGGAGATGCTCGGAGC 60.809 60.000 22.78 22.78 42.82 4.70
103 104 1.522580 GTTGGAGATGCTCGGAGCC 60.523 63.158 26.00 12.41 41.51 4.70
104 105 3.081311 TTGGAGATGCTCGGAGCCG 62.081 63.158 26.00 1.74 41.51 5.52
105 106 4.959596 GGAGATGCTCGGAGCCGC 62.960 72.222 26.00 17.51 41.51 6.53
106 107 4.212913 GAGATGCTCGGAGCCGCA 62.213 66.667 26.00 10.15 41.51 5.69
107 108 3.512223 GAGATGCTCGGAGCCGCAT 62.512 63.158 26.00 14.59 44.38 4.73
108 109 3.040763 GATGCTCGGAGCCGCATC 61.041 66.667 26.00 18.82 46.95 3.91
109 110 4.615815 ATGCTCGGAGCCGCATCC 62.616 66.667 26.00 0.00 41.51 3.51
116 117 1.026718 CGGAGCCGCATCCTTTTTCT 61.027 55.000 0.00 0.00 37.20 2.52
153 154 2.047274 CTGGGTGCACGAATCGGT 60.047 61.111 11.45 0.00 0.00 4.69
196 197 2.034305 GGGACAAGATCTATACGCGTGT 59.966 50.000 24.59 19.31 0.00 4.49
199 200 4.537965 GACAAGATCTATACGCGTGTCAT 58.462 43.478 24.59 10.44 35.20 3.06
214 255 0.107945 GTCATGCTCCCAGTGTCTCC 60.108 60.000 0.00 0.00 0.00 3.71
223 264 0.171455 CCAGTGTCTCCGCTACTGTC 59.829 60.000 0.00 0.00 40.04 3.51
225 266 1.542030 CAGTGTCTCCGCTACTGTCTT 59.458 52.381 0.00 0.00 37.59 3.01
226 267 1.542030 AGTGTCTCCGCTACTGTCTTG 59.458 52.381 0.00 0.00 0.00 3.02
227 268 1.269998 GTGTCTCCGCTACTGTCTTGT 59.730 52.381 0.00 0.00 0.00 3.16
228 269 1.269723 TGTCTCCGCTACTGTCTTGTG 59.730 52.381 0.00 0.00 0.00 3.33
229 270 1.269998 GTCTCCGCTACTGTCTTGTGT 59.730 52.381 0.00 0.00 0.00 3.72
230 271 2.486982 GTCTCCGCTACTGTCTTGTGTA 59.513 50.000 0.00 0.00 0.00 2.90
231 272 2.747989 TCTCCGCTACTGTCTTGTGTAG 59.252 50.000 0.00 0.00 39.15 2.74
232 273 2.488545 CTCCGCTACTGTCTTGTGTAGT 59.511 50.000 0.00 0.00 38.59 2.73
233 274 2.228103 TCCGCTACTGTCTTGTGTAGTG 59.772 50.000 0.00 0.00 43.13 2.74
234 275 2.596452 CGCTACTGTCTTGTGTAGTGG 58.404 52.381 0.00 0.00 41.13 4.00
235 276 2.338500 GCTACTGTCTTGTGTAGTGGC 58.662 52.381 0.00 0.00 40.73 5.01
236 277 2.028930 GCTACTGTCTTGTGTAGTGGCT 60.029 50.000 0.00 0.00 43.09 4.75
237 278 3.192844 GCTACTGTCTTGTGTAGTGGCTA 59.807 47.826 0.00 0.00 43.09 3.93
238 279 4.142138 GCTACTGTCTTGTGTAGTGGCTAT 60.142 45.833 0.00 0.00 43.09 2.97
239 280 4.193826 ACTGTCTTGTGTAGTGGCTATG 57.806 45.455 0.00 0.00 0.00 2.23
240 281 2.932614 CTGTCTTGTGTAGTGGCTATGC 59.067 50.000 0.00 0.00 0.00 3.14
255 296 4.580868 GGCTATGCCTCTATTTAAGGACC 58.419 47.826 0.73 0.00 46.69 4.46
256 297 4.041691 GGCTATGCCTCTATTTAAGGACCA 59.958 45.833 0.73 0.00 46.69 4.02
257 298 5.241662 GCTATGCCTCTATTTAAGGACCAG 58.758 45.833 0.00 0.00 35.83 4.00
258 299 5.221742 GCTATGCCTCTATTTAAGGACCAGT 60.222 44.000 0.00 0.00 35.83 4.00
259 300 4.755266 TGCCTCTATTTAAGGACCAGTC 57.245 45.455 0.00 0.00 35.83 3.51
260 301 3.132289 TGCCTCTATTTAAGGACCAGTCG 59.868 47.826 0.00 0.00 35.83 4.18
261 302 3.492829 GCCTCTATTTAAGGACCAGTCGG 60.493 52.174 0.00 0.00 35.83 4.79
270 311 3.749981 ACCAGTCGGTTACGTCGT 58.250 55.556 2.21 2.21 46.31 4.34
271 312 2.032981 ACCAGTCGGTTACGTCGTT 58.967 52.632 1.78 0.00 46.31 3.85
272 313 0.040067 ACCAGTCGGTTACGTCGTTC 60.040 55.000 1.78 0.00 46.31 3.95
273 314 0.730494 CCAGTCGGTTACGTCGTTCC 60.730 60.000 1.78 6.21 41.85 3.62
274 315 1.061799 CAGTCGGTTACGTCGTTCCG 61.062 60.000 25.25 25.25 43.65 4.30
275 316 2.126888 TCGGTTACGTCGTTCCGC 60.127 61.111 25.92 7.80 42.28 5.54
276 317 2.126734 CGGTTACGTCGTTCCGCT 60.127 61.111 21.88 0.00 36.68 5.52
277 318 2.148365 CGGTTACGTCGTTCCGCTC 61.148 63.158 21.88 2.13 36.68 5.03
278 319 2.148365 GGTTACGTCGTTCCGCTCG 61.148 63.158 1.78 0.00 0.00 5.03
279 320 1.441016 GTTACGTCGTTCCGCTCGT 60.441 57.895 1.78 10.20 39.28 4.18
280 321 0.179225 GTTACGTCGTTCCGCTCGTA 60.179 55.000 1.78 8.75 37.89 3.43
281 322 0.515127 TTACGTCGTTCCGCTCGTAA 59.485 50.000 1.78 16.04 41.82 3.18
282 323 0.515127 TACGTCGTTCCGCTCGTAAA 59.485 50.000 1.78 0.00 36.89 2.01
283 324 0.109597 ACGTCGTTCCGCTCGTAAAT 60.110 50.000 0.00 0.00 36.14 1.40
284 325 0.986992 CGTCGTTCCGCTCGTAAATT 59.013 50.000 0.00 0.00 0.00 1.82
285 326 2.176369 CGTCGTTCCGCTCGTAAATTA 58.824 47.619 0.00 0.00 0.00 1.40
286 327 2.593775 CGTCGTTCCGCTCGTAAATTAA 59.406 45.455 0.00 0.00 0.00 1.40
287 328 3.300754 CGTCGTTCCGCTCGTAAATTAAG 60.301 47.826 0.00 0.00 0.00 1.85
288 329 3.609807 GTCGTTCCGCTCGTAAATTAAGT 59.390 43.478 0.00 0.00 0.00 2.24
289 330 3.853671 TCGTTCCGCTCGTAAATTAAGTC 59.146 43.478 0.00 0.00 0.00 3.01
290 331 3.609373 CGTTCCGCTCGTAAATTAAGTCA 59.391 43.478 0.00 0.00 0.00 3.41
291 332 4.090354 CGTTCCGCTCGTAAATTAAGTCAA 59.910 41.667 0.00 0.00 0.00 3.18
292 333 5.220340 CGTTCCGCTCGTAAATTAAGTCAAT 60.220 40.000 0.00 0.00 0.00 2.57
293 334 5.712217 TCCGCTCGTAAATTAAGTCAATG 57.288 39.130 0.00 0.00 0.00 2.82
294 335 5.412640 TCCGCTCGTAAATTAAGTCAATGA 58.587 37.500 0.00 0.00 0.00 2.57
295 336 5.290158 TCCGCTCGTAAATTAAGTCAATGAC 59.710 40.000 5.02 5.02 0.00 3.06
296 337 5.291128 CCGCTCGTAAATTAAGTCAATGACT 59.709 40.000 10.56 10.56 45.64 3.41
297 338 6.474427 CCGCTCGTAAATTAAGTCAATGACTA 59.526 38.462 17.04 1.96 42.59 2.59
298 339 7.328112 CGCTCGTAAATTAAGTCAATGACTAC 58.672 38.462 17.04 8.83 42.59 2.73
299 340 7.220300 CGCTCGTAAATTAAGTCAATGACTACT 59.780 37.037 17.04 4.52 42.59 2.57
300 341 8.321716 GCTCGTAAATTAAGTCAATGACTACTG 58.678 37.037 17.04 6.75 42.59 2.74
301 342 8.181487 TCGTAAATTAAGTCAATGACTACTGC 57.819 34.615 17.04 2.86 42.59 4.40
302 343 7.815549 TCGTAAATTAAGTCAATGACTACTGCA 59.184 33.333 17.04 0.00 42.59 4.41
303 344 8.604035 CGTAAATTAAGTCAATGACTACTGCAT 58.396 33.333 17.04 2.21 42.59 3.96
304 345 9.708222 GTAAATTAAGTCAATGACTACTGCATG 57.292 33.333 17.04 0.00 42.59 4.06
305 346 7.928307 AATTAAGTCAATGACTACTGCATGT 57.072 32.000 17.04 0.68 42.59 3.21
306 347 6.968131 TTAAGTCAATGACTACTGCATGTC 57.032 37.500 17.04 7.44 42.59 3.06
307 348 3.515630 AGTCAATGACTACTGCATGTCG 58.484 45.455 15.09 0.05 41.51 4.35
308 349 3.056536 AGTCAATGACTACTGCATGTCGT 60.057 43.478 15.09 6.79 41.51 4.34
309 350 3.061295 GTCAATGACTACTGCATGTCGTG 59.939 47.826 6.07 9.47 36.10 4.35
321 362 3.933155 CATGTCGTGCTCAATAAGGAC 57.067 47.619 0.00 0.00 42.56 3.85
322 363 2.380084 TGTCGTGCTCAATAAGGACC 57.620 50.000 0.00 0.00 43.02 4.46
323 364 1.621317 TGTCGTGCTCAATAAGGACCA 59.379 47.619 0.00 0.00 43.02 4.02
324 365 2.037902 TGTCGTGCTCAATAAGGACCAA 59.962 45.455 0.00 0.00 43.02 3.67
325 366 3.270877 GTCGTGCTCAATAAGGACCAAT 58.729 45.455 0.00 0.00 43.02 3.16
326 367 3.309954 GTCGTGCTCAATAAGGACCAATC 59.690 47.826 0.00 0.00 43.02 2.67
327 368 2.285220 CGTGCTCAATAAGGACCAATCG 59.715 50.000 0.00 0.00 43.02 3.34
328 369 2.614057 GTGCTCAATAAGGACCAATCGG 59.386 50.000 0.00 0.00 40.27 4.18
340 381 3.713826 ACCAATCGGTTATCTGTGGTT 57.286 42.857 0.00 0.00 46.31 3.67
341 382 4.028993 ACCAATCGGTTATCTGTGGTTT 57.971 40.909 0.00 0.00 46.31 3.27
342 383 5.168647 ACCAATCGGTTATCTGTGGTTTA 57.831 39.130 0.00 0.00 46.31 2.01
343 384 5.751586 ACCAATCGGTTATCTGTGGTTTAT 58.248 37.500 0.00 0.00 46.31 1.40
344 385 5.820947 ACCAATCGGTTATCTGTGGTTTATC 59.179 40.000 0.00 0.00 46.31 1.75
345 386 5.050363 CCAATCGGTTATCTGTGGTTTATCG 60.050 44.000 0.00 0.00 0.00 2.92
346 387 4.724074 TCGGTTATCTGTGGTTTATCGT 57.276 40.909 0.00 0.00 0.00 3.73
347 388 5.833406 TCGGTTATCTGTGGTTTATCGTA 57.167 39.130 0.00 0.00 0.00 3.43
348 389 5.581605 TCGGTTATCTGTGGTTTATCGTAC 58.418 41.667 0.00 0.00 0.00 3.67
349 390 5.125257 TCGGTTATCTGTGGTTTATCGTACA 59.875 40.000 0.00 0.00 0.00 2.90
350 391 5.806502 CGGTTATCTGTGGTTTATCGTACAA 59.193 40.000 0.00 0.00 0.00 2.41
351 392 6.477688 CGGTTATCTGTGGTTTATCGTACAAT 59.522 38.462 0.00 0.00 0.00 2.71
352 393 7.306399 CGGTTATCTGTGGTTTATCGTACAATC 60.306 40.741 0.00 0.00 0.00 2.67
353 394 7.709613 GGTTATCTGTGGTTTATCGTACAATCT 59.290 37.037 0.00 0.00 0.00 2.40
354 395 8.753175 GTTATCTGTGGTTTATCGTACAATCTC 58.247 37.037 0.00 0.00 0.00 2.75
355 396 5.657474 TCTGTGGTTTATCGTACAATCTCC 58.343 41.667 0.00 0.00 0.00 3.71
356 397 5.186215 TCTGTGGTTTATCGTACAATCTCCA 59.814 40.000 0.00 0.00 0.00 3.86
357 398 5.172934 TGTGGTTTATCGTACAATCTCCAC 58.827 41.667 12.85 12.85 41.83 4.02
358 399 5.172934 GTGGTTTATCGTACAATCTCCACA 58.827 41.667 14.09 0.00 41.34 4.17
359 400 5.640357 GTGGTTTATCGTACAATCTCCACAA 59.360 40.000 14.09 0.00 41.34 3.33
360 401 5.640357 TGGTTTATCGTACAATCTCCACAAC 59.360 40.000 0.00 0.00 0.00 3.32
361 402 5.873164 GGTTTATCGTACAATCTCCACAACT 59.127 40.000 0.00 0.00 0.00 3.16
362 403 6.183360 GGTTTATCGTACAATCTCCACAACTG 60.183 42.308 0.00 0.00 0.00 3.16
363 404 2.683968 TCGTACAATCTCCACAACTGC 58.316 47.619 0.00 0.00 0.00 4.40
364 405 2.036604 TCGTACAATCTCCACAACTGCA 59.963 45.455 0.00 0.00 0.00 4.41
365 406 2.157668 CGTACAATCTCCACAACTGCAC 59.842 50.000 0.00 0.00 0.00 4.57
366 407 2.346766 ACAATCTCCACAACTGCACA 57.653 45.000 0.00 0.00 0.00 4.57
367 408 2.653726 ACAATCTCCACAACTGCACAA 58.346 42.857 0.00 0.00 0.00 3.33
368 409 2.358898 ACAATCTCCACAACTGCACAAC 59.641 45.455 0.00 0.00 0.00 3.32
369 410 2.620115 CAATCTCCACAACTGCACAACT 59.380 45.455 0.00 0.00 0.00 3.16
370 411 1.667236 TCTCCACAACTGCACAACTG 58.333 50.000 0.00 0.00 0.00 3.16
371 412 0.664761 CTCCACAACTGCACAACTGG 59.335 55.000 0.00 0.00 0.00 4.00
372 413 0.254462 TCCACAACTGCACAACTGGA 59.746 50.000 0.00 0.00 0.00 3.86
373 414 0.381801 CCACAACTGCACAACTGGAC 59.618 55.000 0.00 0.00 0.00 4.02
374 415 1.382522 CACAACTGCACAACTGGACT 58.617 50.000 0.00 0.00 0.00 3.85
375 416 2.560504 CACAACTGCACAACTGGACTA 58.439 47.619 0.00 0.00 0.00 2.59
376 417 2.287915 CACAACTGCACAACTGGACTAC 59.712 50.000 0.00 0.00 0.00 2.73
377 418 1.873591 CAACTGCACAACTGGACTACC 59.126 52.381 0.00 0.00 0.00 3.18
378 419 1.128200 ACTGCACAACTGGACTACCA 58.872 50.000 0.00 0.00 44.76 3.25
379 420 1.202651 ACTGCACAACTGGACTACCAC 60.203 52.381 0.00 0.00 41.77 4.16
380 421 1.070758 CTGCACAACTGGACTACCACT 59.929 52.381 0.00 0.00 41.77 4.00
381 422 1.070134 TGCACAACTGGACTACCACTC 59.930 52.381 0.00 0.00 41.77 3.51
382 423 1.070134 GCACAACTGGACTACCACTCA 59.930 52.381 0.00 0.00 41.77 3.41
383 424 2.484770 GCACAACTGGACTACCACTCAA 60.485 50.000 0.00 0.00 41.77 3.02
384 425 3.807209 GCACAACTGGACTACCACTCAAT 60.807 47.826 0.00 0.00 41.77 2.57
385 426 4.389374 CACAACTGGACTACCACTCAATT 58.611 43.478 0.00 0.00 41.77 2.32
386 427 4.821805 CACAACTGGACTACCACTCAATTT 59.178 41.667 0.00 0.00 41.77 1.82
387 428 5.299279 CACAACTGGACTACCACTCAATTTT 59.701 40.000 0.00 0.00 41.77 1.82
388 429 6.485313 CACAACTGGACTACCACTCAATTTTA 59.515 38.462 0.00 0.00 41.77 1.52
389 430 6.710744 ACAACTGGACTACCACTCAATTTTAG 59.289 38.462 0.00 0.00 41.77 1.85
390 431 5.246307 ACTGGACTACCACTCAATTTTAGC 58.754 41.667 0.00 0.00 41.77 3.09
391 432 4.250464 TGGACTACCACTCAATTTTAGCG 58.750 43.478 0.00 0.00 41.77 4.26
392 433 3.063588 GGACTACCACTCAATTTTAGCGC 59.936 47.826 0.00 0.00 35.97 5.92
393 434 2.671396 ACTACCACTCAATTTTAGCGCG 59.329 45.455 0.00 0.00 0.00 6.86
394 435 1.519408 ACCACTCAATTTTAGCGCGT 58.481 45.000 8.43 0.00 0.00 6.01
395 436 1.463444 ACCACTCAATTTTAGCGCGTC 59.537 47.619 8.43 0.00 0.00 5.19
396 437 1.526986 CCACTCAATTTTAGCGCGTCG 60.527 52.381 8.43 0.00 0.00 5.12
397 438 1.388768 CACTCAATTTTAGCGCGTCGA 59.611 47.619 8.43 0.00 0.00 4.20
398 439 2.063266 ACTCAATTTTAGCGCGTCGAA 58.937 42.857 8.43 0.00 0.00 3.71
399 440 2.671396 ACTCAATTTTAGCGCGTCGAAT 59.329 40.909 8.43 0.47 0.00 3.34
400 441 3.124636 ACTCAATTTTAGCGCGTCGAATT 59.875 39.130 8.43 6.99 0.00 2.17
401 442 3.666001 TCAATTTTAGCGCGTCGAATTC 58.334 40.909 8.43 0.00 0.00 2.17
402 443 2.732001 ATTTTAGCGCGTCGAATTCC 57.268 45.000 8.43 0.00 0.00 3.01
403 444 1.430479 TTTTAGCGCGTCGAATTCCA 58.570 45.000 8.43 0.00 0.00 3.53
404 445 0.717224 TTTAGCGCGTCGAATTCCAC 59.283 50.000 8.43 0.00 0.00 4.02
405 446 1.407721 TTAGCGCGTCGAATTCCACG 61.408 55.000 19.53 19.53 39.09 4.94
406 447 2.255994 TAGCGCGTCGAATTCCACGA 62.256 55.000 26.50 6.71 38.32 4.35
413 454 0.238025 TCGAATTCCACGACGAACGA 59.762 50.000 0.00 0.00 45.77 3.85
414 455 0.361184 CGAATTCCACGACGAACGAC 59.639 55.000 0.00 0.00 45.77 4.34
415 456 1.694639 GAATTCCACGACGAACGACT 58.305 50.000 0.00 0.00 45.77 4.18
416 457 1.385743 GAATTCCACGACGAACGACTG 59.614 52.381 0.00 3.04 45.77 3.51
417 458 0.388134 ATTCCACGACGAACGACTGG 60.388 55.000 0.00 10.55 45.77 4.00
418 459 1.727511 TTCCACGACGAACGACTGGT 61.728 55.000 0.00 0.00 45.77 4.00
419 460 0.884259 TCCACGACGAACGACTGGTA 60.884 55.000 0.00 1.35 45.77 3.25
420 461 0.169672 CCACGACGAACGACTGGTAT 59.830 55.000 0.00 0.00 45.77 2.73
421 462 1.256652 CACGACGAACGACTGGTATG 58.743 55.000 0.00 0.00 45.77 2.39
422 463 0.169672 ACGACGAACGACTGGTATGG 59.830 55.000 0.00 0.00 45.77 2.74
423 464 0.448990 CGACGAACGACTGGTATGGA 59.551 55.000 0.14 0.00 45.77 3.41
424 465 1.135603 CGACGAACGACTGGTATGGAA 60.136 52.381 0.14 0.00 45.77 3.53
425 466 2.479049 CGACGAACGACTGGTATGGAAT 60.479 50.000 0.14 0.00 45.77 3.01
426 467 3.114065 GACGAACGACTGGTATGGAATC 58.886 50.000 0.14 0.00 0.00 2.52
427 468 2.494471 ACGAACGACTGGTATGGAATCA 59.506 45.455 0.14 0.00 0.00 2.57
428 469 3.056393 ACGAACGACTGGTATGGAATCAA 60.056 43.478 0.14 0.00 0.00 2.57
429 470 3.930229 CGAACGACTGGTATGGAATCAAA 59.070 43.478 0.00 0.00 0.00 2.69
430 471 4.032900 CGAACGACTGGTATGGAATCAAAG 59.967 45.833 0.00 0.00 0.00 2.77
431 472 4.553330 ACGACTGGTATGGAATCAAAGT 57.447 40.909 0.00 0.00 0.00 2.66
432 473 4.504858 ACGACTGGTATGGAATCAAAGTC 58.495 43.478 0.00 0.00 0.00 3.01
433 474 4.020573 ACGACTGGTATGGAATCAAAGTCA 60.021 41.667 0.00 0.00 33.75 3.41
434 475 5.118990 CGACTGGTATGGAATCAAAGTCAT 58.881 41.667 0.00 0.00 33.75 3.06
435 476 5.007039 CGACTGGTATGGAATCAAAGTCATG 59.993 44.000 0.00 0.00 33.75 3.07
436 477 6.065976 ACTGGTATGGAATCAAAGTCATGA 57.934 37.500 0.00 0.00 0.00 3.07
437 478 6.484288 ACTGGTATGGAATCAAAGTCATGAA 58.516 36.000 0.00 0.00 32.06 2.57
438 479 6.600822 ACTGGTATGGAATCAAAGTCATGAAG 59.399 38.462 0.00 0.00 32.06 3.02
439 480 5.887598 TGGTATGGAATCAAAGTCATGAAGG 59.112 40.000 0.00 0.00 32.06 3.46
440 481 6.122277 GGTATGGAATCAAAGTCATGAAGGA 58.878 40.000 0.00 0.00 32.06 3.36
441 482 6.603201 GGTATGGAATCAAAGTCATGAAGGAA 59.397 38.462 0.00 0.00 32.06 3.36
442 483 7.122650 GGTATGGAATCAAAGTCATGAAGGAAA 59.877 37.037 0.00 0.00 32.06 3.13
443 484 7.729124 ATGGAATCAAAGTCATGAAGGAAAT 57.271 32.000 0.00 0.00 32.06 2.17
444 485 8.827832 ATGGAATCAAAGTCATGAAGGAAATA 57.172 30.769 0.00 0.00 32.06 1.40
445 486 8.055279 TGGAATCAAAGTCATGAAGGAAATAC 57.945 34.615 0.00 0.00 32.06 1.89
446 487 7.122650 TGGAATCAAAGTCATGAAGGAAATACC 59.877 37.037 0.00 0.00 39.35 2.73
447 488 7.122650 GGAATCAAAGTCATGAAGGAAATACCA 59.877 37.037 0.00 0.00 42.04 3.25
448 489 6.817765 TCAAAGTCATGAAGGAAATACCAC 57.182 37.500 0.00 0.00 42.04 4.16
449 490 5.411361 TCAAAGTCATGAAGGAAATACCACG 59.589 40.000 0.00 0.00 42.04 4.94
450 491 4.819105 AGTCATGAAGGAAATACCACGA 57.181 40.909 0.00 0.00 42.04 4.35
451 492 5.359194 AGTCATGAAGGAAATACCACGAT 57.641 39.130 0.00 0.00 42.04 3.73
452 493 5.118990 AGTCATGAAGGAAATACCACGATG 58.881 41.667 0.00 0.00 42.04 3.84
453 494 5.104941 AGTCATGAAGGAAATACCACGATGA 60.105 40.000 0.00 0.00 42.04 2.92
454 495 5.584649 GTCATGAAGGAAATACCACGATGAA 59.415 40.000 0.00 0.00 42.04 2.57
455 496 6.260936 GTCATGAAGGAAATACCACGATGAAT 59.739 38.462 0.00 0.00 42.04 2.57
456 497 6.828273 TCATGAAGGAAATACCACGATGAATT 59.172 34.615 0.00 0.00 42.04 2.17
457 498 6.677781 TGAAGGAAATACCACGATGAATTC 57.322 37.500 0.00 0.00 42.04 2.17
458 499 5.588648 TGAAGGAAATACCACGATGAATTCC 59.411 40.000 2.27 0.00 42.04 3.01
459 500 5.110814 AGGAAATACCACGATGAATTCCA 57.889 39.130 2.27 0.00 42.04 3.53
460 501 4.881850 AGGAAATACCACGATGAATTCCAC 59.118 41.667 2.27 0.00 42.04 4.02
461 502 4.260620 GGAAATACCACGATGAATTCCACG 60.261 45.833 16.07 16.07 35.92 4.94
462 503 3.812156 ATACCACGATGAATTCCACGA 57.188 42.857 21.83 5.92 0.00 4.35
463 504 1.722011 ACCACGATGAATTCCACGAC 58.278 50.000 21.83 2.58 0.00 4.34
464 505 0.645355 CCACGATGAATTCCACGACG 59.355 55.000 21.83 13.71 0.00 5.12
465 506 1.624487 CACGATGAATTCCACGACGA 58.376 50.000 21.83 0.00 0.00 4.20
466 507 1.989864 CACGATGAATTCCACGACGAA 59.010 47.619 21.83 0.00 0.00 3.85
467 508 1.990563 ACGATGAATTCCACGACGAAC 59.009 47.619 21.83 0.00 0.00 3.95
469 510 2.256174 GATGAATTCCACGACGAACGA 58.744 47.619 0.00 0.00 45.77 3.85
470 511 2.137129 TGAATTCCACGACGAACGAA 57.863 45.000 0.00 0.00 45.77 3.85
471 512 1.788308 TGAATTCCACGACGAACGAAC 59.212 47.619 0.00 0.00 45.77 3.95
472 513 0.780002 AATTCCACGACGAACGAACG 59.220 50.000 0.00 8.74 45.77 3.95
476 517 1.475810 CACGACGAACGAACGACAC 59.524 57.895 18.82 3.88 45.77 3.67
491 532 4.969196 CACGGTGCTGCCTGTCGT 62.969 66.667 0.00 0.00 34.25 4.34
493 534 4.662961 CGGTGCTGCCTGTCGTCA 62.663 66.667 0.00 0.00 34.25 4.35
495 536 1.218047 GGTGCTGCCTGTCGTCATA 59.782 57.895 0.00 0.00 0.00 2.15
503 544 2.849966 CTGTCGTCATAGCGCGCAC 61.850 63.158 35.10 21.40 0.00 5.34
504 545 3.960998 GTCGTCATAGCGCGCACG 61.961 66.667 35.10 31.53 44.07 5.34
633 773 1.064017 TCCCAACAGCCCATGGTATTC 60.064 52.381 11.73 0.00 34.79 1.75
774 919 1.067974 CACTTCGCCCGGACATACATA 59.932 52.381 0.73 0.00 0.00 2.29
798 975 4.712873 GTCGTTTTCGCCGCCGTG 62.713 66.667 0.00 0.00 43.73 4.94
862 1039 4.988598 CGTGCCGTGGTTGGAGCT 62.989 66.667 0.00 0.00 0.00 4.09
864 1041 3.555324 TGCCGTGGTTGGAGCTCA 61.555 61.111 17.19 0.00 0.00 4.26
905 2295 0.541863 CCTCGTCCATGGTTAGCCTT 59.458 55.000 12.58 0.00 35.27 4.35
979 3756 1.903860 GTGCCCGTCCCATATATACCA 59.096 52.381 0.00 0.00 0.00 3.25
1014 4411 0.740737 GGTTCAGCACAGCAAACACT 59.259 50.000 8.73 0.00 31.33 3.55
1073 4482 0.807667 CCACTGCAAGCTAGCTACGG 60.808 60.000 19.70 19.81 37.60 4.02
1395 4835 2.508663 GTCACGAGCTAACCGGCC 60.509 66.667 0.00 0.00 0.00 6.13
1430 4877 2.232941 GGGTACGTCCAACAAGATCTGA 59.767 50.000 0.00 0.00 38.11 3.27
1440 4890 3.111853 ACAAGATCTGAGTGCACGAAA 57.888 42.857 12.01 0.00 0.00 3.46
1469 4919 1.003355 CCGTGGCCAACTGATCAGT 60.003 57.895 22.89 22.89 44.94 3.41
1564 5026 2.512286 CATGTGCCGCCGATCAGT 60.512 61.111 0.00 0.00 0.00 3.41
1600 5088 4.252073 CTGGATCTGAAGAAGTCAACCAG 58.748 47.826 0.00 0.00 41.40 4.00
1845 5386 6.774354 TGTCTACCACACGATTTAAAACTC 57.226 37.500 0.00 0.00 0.00 3.01
1913 5455 1.480954 TCTGATGGCTAAACTCGGTCC 59.519 52.381 0.00 0.00 0.00 4.46
1962 5504 6.531594 CGACTAAAGCATCATCAAGACAACTA 59.468 38.462 0.00 0.00 0.00 2.24
1963 5505 7.063426 CGACTAAAGCATCATCAAGACAACTAA 59.937 37.037 0.00 0.00 0.00 2.24
1965 5507 8.671921 ACTAAAGCATCATCAAGACAACTAATG 58.328 33.333 0.00 0.00 0.00 1.90
1991 5534 5.061179 GTCTAGTTTTGGCCTTGAGTTACA 58.939 41.667 3.32 0.00 0.00 2.41
2003 5546 7.084486 GGCCTTGAGTTACAAATTTCAACTAG 58.916 38.462 12.50 8.75 38.08 2.57
2004 5547 6.582672 GCCTTGAGTTACAAATTTCAACTAGC 59.417 38.462 12.50 10.26 38.08 3.42
2005 5548 7.522236 GCCTTGAGTTACAAATTTCAACTAGCT 60.522 37.037 12.50 0.00 38.08 3.32
2006 5549 7.805071 CCTTGAGTTACAAATTTCAACTAGCTG 59.195 37.037 12.50 0.00 38.08 4.24
2007 5550 6.668323 TGAGTTACAAATTTCAACTAGCTGC 58.332 36.000 12.50 0.00 32.79 5.25
2008 5551 6.262049 TGAGTTACAAATTTCAACTAGCTGCA 59.738 34.615 12.50 5.89 32.79 4.41
2009 5552 6.438763 AGTTACAAATTTCAACTAGCTGCAC 58.561 36.000 11.32 0.00 30.89 4.57
2010 5553 4.243007 ACAAATTTCAACTAGCTGCACC 57.757 40.909 1.02 0.00 0.00 5.01
2011 5554 3.236816 CAAATTTCAACTAGCTGCACCG 58.763 45.455 1.02 0.00 0.00 4.94
2012 5555 0.804989 ATTTCAACTAGCTGCACCGC 59.195 50.000 1.02 0.00 0.00 5.68
2013 5556 0.250295 TTTCAACTAGCTGCACCGCT 60.250 50.000 5.70 5.70 43.83 5.52
2014 5557 0.950555 TTCAACTAGCTGCACCGCTG 60.951 55.000 10.53 3.84 41.12 5.18
2015 5558 1.374631 CAACTAGCTGCACCGCTGA 60.375 57.895 10.53 0.00 41.12 4.26
2016 5559 0.950555 CAACTAGCTGCACCGCTGAA 60.951 55.000 10.53 0.00 41.12 3.02
2017 5560 0.250295 AACTAGCTGCACCGCTGAAA 60.250 50.000 10.53 0.00 41.12 2.69
2018 5561 0.036010 ACTAGCTGCACCGCTGAAAT 60.036 50.000 10.53 0.00 41.12 2.17
2019 5562 1.207089 ACTAGCTGCACCGCTGAAATA 59.793 47.619 10.53 0.00 41.12 1.40
2020 5563 2.279741 CTAGCTGCACCGCTGAAATAA 58.720 47.619 10.53 0.00 41.12 1.40
2021 5564 0.804989 AGCTGCACCGCTGAAATAAC 59.195 50.000 1.02 0.00 39.16 1.89
2022 5565 0.521242 GCTGCACCGCTGAAATAACG 60.521 55.000 0.00 0.00 0.00 3.18
2023 5566 0.796312 CTGCACCGCTGAAATAACGT 59.204 50.000 0.00 0.00 0.00 3.99
2024 5567 1.196808 CTGCACCGCTGAAATAACGTT 59.803 47.619 5.88 5.88 0.00 3.99
2025 5568 1.069568 TGCACCGCTGAAATAACGTTG 60.070 47.619 11.99 0.00 0.00 4.10
2026 5569 1.069500 GCACCGCTGAAATAACGTTGT 60.069 47.619 11.99 0.00 0.00 3.32
2027 5570 2.603652 GCACCGCTGAAATAACGTTGTT 60.604 45.455 11.99 7.93 0.00 2.83
2028 5571 3.623863 CACCGCTGAAATAACGTTGTTT 58.376 40.909 21.03 21.03 0.00 2.83
2029 5572 4.039032 CACCGCTGAAATAACGTTGTTTT 58.961 39.130 21.66 15.56 0.00 2.43
2030 5573 4.501198 CACCGCTGAAATAACGTTGTTTTT 59.499 37.500 21.66 13.33 0.00 1.94
2031 5574 4.736307 ACCGCTGAAATAACGTTGTTTTTC 59.264 37.500 21.66 19.84 0.00 2.29
2032 5575 4.147479 CCGCTGAAATAACGTTGTTTTTCC 59.853 41.667 21.66 11.41 0.00 3.13
2033 5576 4.143906 CGCTGAAATAACGTTGTTTTTCCG 60.144 41.667 21.66 18.57 0.00 4.30
2034 5577 4.736307 GCTGAAATAACGTTGTTTTTCCGT 59.264 37.500 21.66 1.05 36.17 4.69
2035 5578 5.908499 GCTGAAATAACGTTGTTTTTCCGTA 59.092 36.000 21.66 7.60 33.88 4.02
2036 5579 6.579666 GCTGAAATAACGTTGTTTTTCCGTAT 59.420 34.615 21.66 0.00 33.88 3.06
2037 5580 7.113825 GCTGAAATAACGTTGTTTTTCCGTATT 59.886 33.333 21.66 2.52 33.88 1.89
2038 5581 8.271231 TGAAATAACGTTGTTTTTCCGTATTG 57.729 30.769 21.66 0.00 33.88 1.90
2039 5582 7.914346 TGAAATAACGTTGTTTTTCCGTATTGT 59.086 29.630 21.66 0.00 33.88 2.71
2040 5583 7.611821 AATAACGTTGTTTTTCCGTATTGTG 57.388 32.000 11.99 0.00 33.88 3.33
2041 5584 4.619437 ACGTTGTTTTTCCGTATTGTGT 57.381 36.364 0.00 0.00 32.22 3.72
2042 5585 4.344448 ACGTTGTTTTTCCGTATTGTGTG 58.656 39.130 0.00 0.00 32.22 3.82
2043 5586 4.142643 ACGTTGTTTTTCCGTATTGTGTGT 60.143 37.500 0.00 0.00 32.22 3.72
2044 5587 4.435231 CGTTGTTTTTCCGTATTGTGTGTC 59.565 41.667 0.00 0.00 0.00 3.67
2045 5588 5.333513 GTTGTTTTTCCGTATTGTGTGTCA 58.666 37.500 0.00 0.00 0.00 3.58
2046 5589 5.163302 TGTTTTTCCGTATTGTGTGTCAG 57.837 39.130 0.00 0.00 0.00 3.51
2047 5590 4.876679 TGTTTTTCCGTATTGTGTGTCAGA 59.123 37.500 0.00 0.00 0.00 3.27
2048 5591 5.529430 TGTTTTTCCGTATTGTGTGTCAGAT 59.471 36.000 0.00 0.00 0.00 2.90
2049 5592 5.605564 TTTTCCGTATTGTGTGTCAGATG 57.394 39.130 0.00 0.00 0.00 2.90
2050 5593 3.953712 TCCGTATTGTGTGTCAGATGT 57.046 42.857 0.00 0.00 0.00 3.06
2051 5594 4.265904 TCCGTATTGTGTGTCAGATGTT 57.734 40.909 0.00 0.00 0.00 2.71
2052 5595 5.394224 TCCGTATTGTGTGTCAGATGTTA 57.606 39.130 0.00 0.00 0.00 2.41
2053 5596 5.972935 TCCGTATTGTGTGTCAGATGTTAT 58.027 37.500 0.00 0.00 0.00 1.89
2054 5597 7.102847 TCCGTATTGTGTGTCAGATGTTATA 57.897 36.000 0.00 0.00 0.00 0.98
2055 5598 6.976349 TCCGTATTGTGTGTCAGATGTTATAC 59.024 38.462 0.00 0.00 0.00 1.47
2056 5599 6.978659 CCGTATTGTGTGTCAGATGTTATACT 59.021 38.462 0.00 0.00 0.00 2.12
2057 5600 7.167635 CCGTATTGTGTGTCAGATGTTATACTC 59.832 40.741 0.00 0.00 0.00 2.59
2058 5601 7.167635 CGTATTGTGTGTCAGATGTTATACTCC 59.832 40.741 0.00 0.00 0.00 3.85
2059 5602 5.339008 TGTGTGTCAGATGTTATACTCCC 57.661 43.478 0.00 0.00 0.00 4.30
2060 5603 5.023452 TGTGTGTCAGATGTTATACTCCCT 58.977 41.667 0.00 0.00 0.00 4.20
2061 5604 5.127194 TGTGTGTCAGATGTTATACTCCCTC 59.873 44.000 0.00 0.00 0.00 4.30
2062 5605 4.649674 TGTGTCAGATGTTATACTCCCTCC 59.350 45.833 0.00 0.00 0.00 4.30
2063 5606 3.889538 TGTCAGATGTTATACTCCCTCCG 59.110 47.826 0.00 0.00 0.00 4.63
2064 5607 3.890147 GTCAGATGTTATACTCCCTCCGT 59.110 47.826 0.00 0.00 0.00 4.69
2065 5608 4.023021 GTCAGATGTTATACTCCCTCCGTC 60.023 50.000 0.00 0.00 0.00 4.79
2066 5609 3.256136 CAGATGTTATACTCCCTCCGTCC 59.744 52.174 0.00 0.00 0.00 4.79
2067 5610 2.077687 TGTTATACTCCCTCCGTCCC 57.922 55.000 0.00 0.00 0.00 4.46
2068 5611 1.288633 TGTTATACTCCCTCCGTCCCA 59.711 52.381 0.00 0.00 0.00 4.37
2069 5612 2.090943 TGTTATACTCCCTCCGTCCCAT 60.091 50.000 0.00 0.00 0.00 4.00
2070 5613 3.140707 TGTTATACTCCCTCCGTCCCATA 59.859 47.826 0.00 0.00 0.00 2.74
2071 5614 4.154942 GTTATACTCCCTCCGTCCCATAA 58.845 47.826 0.00 0.00 0.00 1.90
2072 5615 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
2073 5616 4.687262 ATACTCCCTCCGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
2074 5617 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2075 5618 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2076 5619 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2077 5620 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2078 5621 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2079 5622 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
2080 5623 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
2081 5624 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
2082 5625 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
2083 5626 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
2084 5627 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
2085 5628 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
2086 5629 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
2087 5630 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
2088 5631 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
2089 5632 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
2090 5633 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
2091 5634 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
2092 5635 7.582679 CCATAATATAAGAGCGTTTTTGACACG 59.417 37.037 0.00 0.00 40.75 4.49
2093 5636 3.806316 ATAAGAGCGTTTTTGACACGG 57.194 42.857 0.00 0.00 38.13 4.94
2094 5637 1.658994 AAGAGCGTTTTTGACACGGA 58.341 45.000 0.00 0.00 38.13 4.69
2095 5638 1.217882 AGAGCGTTTTTGACACGGAG 58.782 50.000 0.00 0.00 38.13 4.63
2096 5639 0.234884 GAGCGTTTTTGACACGGAGG 59.765 55.000 0.00 0.00 38.13 4.30
2097 5640 1.164041 AGCGTTTTTGACACGGAGGG 61.164 55.000 0.00 0.00 38.13 4.30
2098 5641 1.161563 GCGTTTTTGACACGGAGGGA 61.162 55.000 0.00 0.00 38.13 4.20
2099 5642 0.865769 CGTTTTTGACACGGAGGGAG 59.134 55.000 0.00 0.00 33.86 4.30
2100 5643 1.808891 CGTTTTTGACACGGAGGGAGT 60.809 52.381 0.00 0.00 33.86 3.85
2101 5644 2.546373 CGTTTTTGACACGGAGGGAGTA 60.546 50.000 0.00 0.00 33.86 2.59
2102 5645 3.671716 GTTTTTGACACGGAGGGAGTAT 58.328 45.455 0.00 0.00 0.00 2.12
2103 5646 3.604875 TTTTGACACGGAGGGAGTATC 57.395 47.619 0.00 0.00 0.00 2.24
2104 5647 2.526888 TTGACACGGAGGGAGTATCT 57.473 50.000 0.00 0.00 33.73 1.98
2105 5648 2.526888 TGACACGGAGGGAGTATCTT 57.473 50.000 0.00 0.00 33.73 2.40
2106 5649 2.100197 TGACACGGAGGGAGTATCTTG 58.900 52.381 0.00 0.00 33.73 3.02
2107 5650 0.824759 ACACGGAGGGAGTATCTTGC 59.175 55.000 0.00 0.00 33.73 4.01
2108 5651 1.115467 CACGGAGGGAGTATCTTGCT 58.885 55.000 0.00 0.00 33.73 3.91
2109 5652 1.482593 CACGGAGGGAGTATCTTGCTT 59.517 52.381 0.00 0.00 33.73 3.91
2110 5653 2.693591 CACGGAGGGAGTATCTTGCTTA 59.306 50.000 0.00 0.00 33.73 3.09
2111 5654 2.694109 ACGGAGGGAGTATCTTGCTTAC 59.306 50.000 0.00 0.00 33.73 2.34
2112 5655 2.693591 CGGAGGGAGTATCTTGCTTACA 59.306 50.000 0.00 0.00 33.73 2.41
2113 5656 3.243569 CGGAGGGAGTATCTTGCTTACAG 60.244 52.174 0.00 0.00 33.73 2.74
2114 5657 3.493524 GGAGGGAGTATCTTGCTTACAGC 60.494 52.174 0.00 0.00 37.16 4.40
2115 5658 2.101582 AGGGAGTATCTTGCTTACAGCG 59.898 50.000 0.00 0.00 38.87 5.18
2116 5659 2.100916 GGGAGTATCTTGCTTACAGCGA 59.899 50.000 0.00 0.00 38.87 4.93
2123 5666 2.543777 TTGCTTACAGCGAGACCTTT 57.456 45.000 0.00 0.00 46.26 3.11
2124 5667 2.543777 TGCTTACAGCGAGACCTTTT 57.456 45.000 0.00 0.00 46.26 2.27
2125 5668 2.846193 TGCTTACAGCGAGACCTTTTT 58.154 42.857 0.00 0.00 46.26 1.94
2177 5720 2.046314 CGGGCCAGACGGTTTCAT 60.046 61.111 4.39 0.00 33.28 2.57
2273 5816 0.250124 CACACGGCAAACCTCCACTA 60.250 55.000 0.00 0.00 0.00 2.74
2334 5877 1.383109 TGCTGAGGGGATCACCGAT 60.383 57.895 8.77 0.00 41.60 4.18
2432 5975 1.940613 GAACAAGCTTGTCTCCAACGT 59.059 47.619 31.20 13.99 41.31 3.99
2449 5992 1.321016 CGTGCAAAGTGCTTTCATCG 58.679 50.000 1.43 0.00 45.31 3.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.135493 GTTTCGACGCGCTCCAGC 62.135 66.667 5.73 0.00 37.78 4.85
14 15 3.827784 CGTTTCGACGCGCTCCAG 61.828 66.667 5.73 0.00 0.00 3.86
15 16 4.634133 ACGTTTCGACGCGCTCCA 62.634 61.111 5.73 0.00 36.44 3.86
16 17 3.824510 GACGTTTCGACGCGCTCC 61.825 66.667 5.73 0.00 36.44 4.70
17 18 3.824510 GGACGTTTCGACGCGCTC 61.825 66.667 5.73 1.80 36.44 5.03
36 37 3.335335 CGAGTTTTTAACGCGCGC 58.665 55.556 32.58 23.91 46.72 6.86
41 42 4.546941 GTGCGGTAAATCGAGTTTTTAACG 59.453 41.667 18.47 18.47 46.97 3.18
42 43 4.546941 CGTGCGGTAAATCGAGTTTTTAAC 59.453 41.667 2.37 0.00 0.00 2.01
43 44 4.700332 CGTGCGGTAAATCGAGTTTTTAA 58.300 39.130 2.37 0.00 0.00 1.52
44 45 3.423384 GCGTGCGGTAAATCGAGTTTTTA 60.423 43.478 2.37 0.00 0.00 1.52
45 46 2.663606 GCGTGCGGTAAATCGAGTTTTT 60.664 45.455 2.37 0.00 0.00 1.94
46 47 1.136169 GCGTGCGGTAAATCGAGTTTT 60.136 47.619 2.37 0.00 0.00 2.43
47 48 0.441145 GCGTGCGGTAAATCGAGTTT 59.559 50.000 2.37 0.82 0.00 2.66
48 49 1.680105 CGCGTGCGGTAAATCGAGTT 61.680 55.000 6.30 2.72 35.56 3.01
49 50 2.156446 CGCGTGCGGTAAATCGAGT 61.156 57.895 6.30 0.00 35.56 4.18
50 51 2.613486 CGCGTGCGGTAAATCGAG 59.387 61.111 6.30 0.00 35.56 4.04
51 52 3.547313 GCGCGTGCGGTAAATCGA 61.547 61.111 16.70 0.00 40.19 3.59
77 78 3.197790 CATCTCCAACAGCCGCGG 61.198 66.667 24.05 24.05 0.00 6.46
78 79 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
79 80 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
80 81 2.169789 CGAGCATCTCCAACAGCCG 61.170 63.158 0.00 0.00 0.00 5.52
81 82 1.817099 CCGAGCATCTCCAACAGCC 60.817 63.158 0.00 0.00 0.00 4.85
82 83 0.809241 CTCCGAGCATCTCCAACAGC 60.809 60.000 0.00 0.00 0.00 4.40
83 84 0.809241 GCTCCGAGCATCTCCAACAG 60.809 60.000 15.78 0.00 41.89 3.16
84 85 1.219124 GCTCCGAGCATCTCCAACA 59.781 57.895 15.78 0.00 41.89 3.33
85 86 1.522580 GGCTCCGAGCATCTCCAAC 60.523 63.158 21.76 0.00 44.75 3.77
86 87 2.903357 GGCTCCGAGCATCTCCAA 59.097 61.111 21.76 0.00 44.75 3.53
87 88 3.531207 CGGCTCCGAGCATCTCCA 61.531 66.667 21.76 0.00 44.75 3.86
88 89 4.959596 GCGGCTCCGAGCATCTCC 62.960 72.222 21.76 3.27 44.75 3.71
89 90 4.212913 TGCGGCTCCGAGCATCTC 62.213 66.667 21.76 7.87 44.75 2.75
94 95 4.537433 AAGGATGCGGCTCCGAGC 62.537 66.667 12.27 12.27 42.83 5.03
95 96 1.026718 AAAAAGGATGCGGCTCCGAG 61.027 55.000 13.11 0.00 42.83 4.63
96 97 1.002624 AAAAAGGATGCGGCTCCGA 60.003 52.632 13.11 0.00 42.83 4.55
97 98 1.026718 AGAAAAAGGATGCGGCTCCG 61.027 55.000 3.56 3.56 40.46 4.63
98 99 0.453390 CAGAAAAAGGATGCGGCTCC 59.547 55.000 0.00 5.96 35.37 4.70
99 100 0.179153 GCAGAAAAAGGATGCGGCTC 60.179 55.000 0.00 0.00 0.00 4.70
100 101 1.885871 GCAGAAAAAGGATGCGGCT 59.114 52.632 0.00 0.00 0.00 5.52
101 102 4.483711 GCAGAAAAAGGATGCGGC 57.516 55.556 0.00 0.00 0.00 6.53
104 105 3.119495 ACCATTACGCAGAAAAAGGATGC 60.119 43.478 0.00 0.00 36.60 3.91
105 106 4.701956 ACCATTACGCAGAAAAAGGATG 57.298 40.909 0.00 0.00 0.00 3.51
106 107 5.010282 AGAACCATTACGCAGAAAAAGGAT 58.990 37.500 0.00 0.00 0.00 3.24
107 108 4.394729 AGAACCATTACGCAGAAAAAGGA 58.605 39.130 0.00 0.00 0.00 3.36
108 109 4.455877 AGAGAACCATTACGCAGAAAAAGG 59.544 41.667 0.00 0.00 0.00 3.11
109 110 5.385617 CAGAGAACCATTACGCAGAAAAAG 58.614 41.667 0.00 0.00 0.00 2.27
110 111 4.320202 GCAGAGAACCATTACGCAGAAAAA 60.320 41.667 0.00 0.00 0.00 1.94
116 117 0.739462 CCGCAGAGAACCATTACGCA 60.739 55.000 0.00 0.00 0.00 5.24
147 148 1.665442 GCCCACAAGCAAACCGATT 59.335 52.632 0.00 0.00 0.00 3.34
148 149 2.625823 CGCCCACAAGCAAACCGAT 61.626 57.895 0.00 0.00 0.00 4.18
153 154 3.604667 CCTGCGCCCACAAGCAAA 61.605 61.111 4.18 0.00 43.31 3.68
196 197 1.607801 CGGAGACACTGGGAGCATGA 61.608 60.000 0.00 0.00 0.00 3.07
199 200 2.781431 TAGCGGAGACACTGGGAGCA 62.781 60.000 0.00 0.00 0.00 4.26
214 255 2.596452 CCACTACACAAGACAGTAGCG 58.404 52.381 0.00 0.00 41.01 4.26
234 275 5.221742 ACTGGTCCTTAAATAGAGGCATAGC 60.222 44.000 0.00 0.00 34.17 2.97
235 276 6.426646 ACTGGTCCTTAAATAGAGGCATAG 57.573 41.667 0.00 0.00 34.17 2.23
236 277 5.010719 CGACTGGTCCTTAAATAGAGGCATA 59.989 44.000 0.00 0.00 34.17 3.14
237 278 4.202264 CGACTGGTCCTTAAATAGAGGCAT 60.202 45.833 0.00 0.00 34.17 4.40
238 279 3.132289 CGACTGGTCCTTAAATAGAGGCA 59.868 47.826 0.00 0.00 34.17 4.75
239 280 3.492829 CCGACTGGTCCTTAAATAGAGGC 60.493 52.174 0.00 0.00 34.17 4.70
240 281 4.323553 CCGACTGGTCCTTAAATAGAGG 57.676 50.000 0.00 0.00 35.53 3.69
254 295 0.730494 GGAACGACGTAACCGACTGG 60.730 60.000 0.00 0.00 42.84 4.00
255 296 2.716988 GGAACGACGTAACCGACTG 58.283 57.895 0.00 0.00 37.88 3.51
269 310 5.520022 TTGACTTAATTTACGAGCGGAAC 57.480 39.130 0.00 0.00 0.00 3.62
270 311 5.870433 TCATTGACTTAATTTACGAGCGGAA 59.130 36.000 0.00 0.00 0.00 4.30
271 312 5.290158 GTCATTGACTTAATTTACGAGCGGA 59.710 40.000 9.59 0.00 0.00 5.54
272 313 5.291128 AGTCATTGACTTAATTTACGAGCGG 59.709 40.000 13.61 0.00 40.28 5.52
273 314 6.332504 AGTCATTGACTTAATTTACGAGCG 57.667 37.500 13.61 0.00 40.28 5.03
274 315 8.321716 CAGTAGTCATTGACTTAATTTACGAGC 58.678 37.037 23.53 0.00 40.28 5.03
275 316 8.321716 GCAGTAGTCATTGACTTAATTTACGAG 58.678 37.037 23.53 13.09 40.28 4.18
276 317 7.815549 TGCAGTAGTCATTGACTTAATTTACGA 59.184 33.333 23.53 0.48 40.28 3.43
277 318 7.959733 TGCAGTAGTCATTGACTTAATTTACG 58.040 34.615 23.53 11.71 40.28 3.18
278 319 9.708222 CATGCAGTAGTCATTGACTTAATTTAC 57.292 33.333 23.53 14.39 40.28 2.01
279 320 9.448438 ACATGCAGTAGTCATTGACTTAATTTA 57.552 29.630 23.53 2.68 40.28 1.40
280 321 8.340618 ACATGCAGTAGTCATTGACTTAATTT 57.659 30.769 23.53 2.10 40.28 1.82
281 322 7.201556 CGACATGCAGTAGTCATTGACTTAATT 60.202 37.037 23.53 1.90 40.28 1.40
282 323 6.256539 CGACATGCAGTAGTCATTGACTTAAT 59.743 38.462 23.53 8.22 40.28 1.40
283 324 5.576774 CGACATGCAGTAGTCATTGACTTAA 59.423 40.000 23.53 4.92 40.28 1.85
284 325 5.102313 CGACATGCAGTAGTCATTGACTTA 58.898 41.667 23.53 8.01 40.28 2.24
285 326 3.928992 CGACATGCAGTAGTCATTGACTT 59.071 43.478 23.53 4.92 40.28 3.01
286 327 3.056536 ACGACATGCAGTAGTCATTGACT 60.057 43.478 22.16 22.16 45.54 3.41
287 328 3.061295 CACGACATGCAGTAGTCATTGAC 59.939 47.826 8.82 8.82 33.51 3.18
288 329 3.253230 CACGACATGCAGTAGTCATTGA 58.747 45.455 14.57 0.00 33.51 2.57
289 330 3.646491 CACGACATGCAGTAGTCATTG 57.354 47.619 14.57 8.44 33.51 2.82
301 342 2.609459 GGTCCTTATTGAGCACGACATG 59.391 50.000 0.00 0.00 33.04 3.21
302 343 2.236146 TGGTCCTTATTGAGCACGACAT 59.764 45.455 0.00 0.00 37.80 3.06
303 344 1.621317 TGGTCCTTATTGAGCACGACA 59.379 47.619 0.00 0.00 37.80 4.35
304 345 2.380084 TGGTCCTTATTGAGCACGAC 57.620 50.000 0.00 0.00 37.80 4.34
305 346 3.531538 GATTGGTCCTTATTGAGCACGA 58.468 45.455 0.00 0.00 42.03 4.35
306 347 2.285220 CGATTGGTCCTTATTGAGCACG 59.715 50.000 0.00 0.00 42.03 5.34
307 348 2.614057 CCGATTGGTCCTTATTGAGCAC 59.386 50.000 0.00 0.00 42.03 4.40
308 349 2.917933 CCGATTGGTCCTTATTGAGCA 58.082 47.619 0.00 0.00 40.73 4.26
321 362 5.050363 CGATAAACCACAGATAACCGATTGG 60.050 44.000 0.00 0.00 42.84 3.16
322 363 5.522460 ACGATAAACCACAGATAACCGATTG 59.478 40.000 0.00 0.00 0.00 2.67
323 364 5.667466 ACGATAAACCACAGATAACCGATT 58.333 37.500 0.00 0.00 0.00 3.34
324 365 5.272283 ACGATAAACCACAGATAACCGAT 57.728 39.130 0.00 0.00 0.00 4.18
325 366 4.724074 ACGATAAACCACAGATAACCGA 57.276 40.909 0.00 0.00 0.00 4.69
326 367 5.342433 TGTACGATAAACCACAGATAACCG 58.658 41.667 0.00 0.00 0.00 4.44
327 368 7.709613 AGATTGTACGATAAACCACAGATAACC 59.290 37.037 0.00 0.00 0.00 2.85
328 369 8.644318 AGATTGTACGATAAACCACAGATAAC 57.356 34.615 0.00 0.00 0.00 1.89
329 370 7.924412 GGAGATTGTACGATAAACCACAGATAA 59.076 37.037 0.00 0.00 0.00 1.75
330 371 7.068962 TGGAGATTGTACGATAAACCACAGATA 59.931 37.037 9.81 0.00 0.00 1.98
331 372 6.127168 TGGAGATTGTACGATAAACCACAGAT 60.127 38.462 9.81 0.00 0.00 2.90
332 373 5.186215 TGGAGATTGTACGATAAACCACAGA 59.814 40.000 9.81 0.00 0.00 3.41
333 374 5.291128 GTGGAGATTGTACGATAAACCACAG 59.709 44.000 25.12 0.00 42.90 3.66
334 375 5.172934 GTGGAGATTGTACGATAAACCACA 58.827 41.667 25.12 8.56 42.90 4.17
335 376 5.172934 TGTGGAGATTGTACGATAAACCAC 58.827 41.667 24.22 24.22 43.43 4.16
336 377 5.408880 TGTGGAGATTGTACGATAAACCA 57.591 39.130 9.81 9.81 0.00 3.67
337 378 5.873164 AGTTGTGGAGATTGTACGATAAACC 59.127 40.000 0.00 1.24 0.00 3.27
338 379 6.672357 GCAGTTGTGGAGATTGTACGATAAAC 60.672 42.308 0.00 0.00 0.00 2.01
339 380 5.350365 GCAGTTGTGGAGATTGTACGATAAA 59.650 40.000 0.00 0.00 0.00 1.40
340 381 4.868171 GCAGTTGTGGAGATTGTACGATAA 59.132 41.667 0.00 0.00 0.00 1.75
341 382 4.081917 TGCAGTTGTGGAGATTGTACGATA 60.082 41.667 0.00 0.00 0.00 2.92
342 383 3.262420 GCAGTTGTGGAGATTGTACGAT 58.738 45.455 0.00 0.00 0.00 3.73
343 384 2.036604 TGCAGTTGTGGAGATTGTACGA 59.963 45.455 0.00 0.00 0.00 3.43
344 385 2.157668 GTGCAGTTGTGGAGATTGTACG 59.842 50.000 0.00 0.00 0.00 3.67
345 386 3.138304 TGTGCAGTTGTGGAGATTGTAC 58.862 45.455 0.00 0.00 0.00 2.90
346 387 3.483808 TGTGCAGTTGTGGAGATTGTA 57.516 42.857 0.00 0.00 0.00 2.41
347 388 2.346766 TGTGCAGTTGTGGAGATTGT 57.653 45.000 0.00 0.00 0.00 2.71
348 389 2.620115 AGTTGTGCAGTTGTGGAGATTG 59.380 45.455 0.00 0.00 0.00 2.67
349 390 2.620115 CAGTTGTGCAGTTGTGGAGATT 59.380 45.455 0.00 0.00 0.00 2.40
350 391 2.224606 CAGTTGTGCAGTTGTGGAGAT 58.775 47.619 0.00 0.00 0.00 2.75
351 392 1.667236 CAGTTGTGCAGTTGTGGAGA 58.333 50.000 0.00 0.00 0.00 3.71
352 393 0.664761 CCAGTTGTGCAGTTGTGGAG 59.335 55.000 0.00 0.00 0.00 3.86
353 394 0.254462 TCCAGTTGTGCAGTTGTGGA 59.746 50.000 4.10 4.10 0.00 4.02
354 395 0.381801 GTCCAGTTGTGCAGTTGTGG 59.618 55.000 0.00 0.00 0.00 4.17
355 396 1.382522 AGTCCAGTTGTGCAGTTGTG 58.617 50.000 0.00 0.00 0.00 3.33
356 397 2.561569 GTAGTCCAGTTGTGCAGTTGT 58.438 47.619 0.00 0.00 0.00 3.32
357 398 1.873591 GGTAGTCCAGTTGTGCAGTTG 59.126 52.381 0.00 0.00 0.00 3.16
358 399 1.488812 TGGTAGTCCAGTTGTGCAGTT 59.511 47.619 0.00 0.00 39.03 3.16
359 400 1.128200 TGGTAGTCCAGTTGTGCAGT 58.872 50.000 0.00 0.00 39.03 4.40
360 401 1.070758 AGTGGTAGTCCAGTTGTGCAG 59.929 52.381 0.00 0.00 44.20 4.41
361 402 1.070134 GAGTGGTAGTCCAGTTGTGCA 59.930 52.381 0.00 0.00 46.31 4.57
362 403 1.070134 TGAGTGGTAGTCCAGTTGTGC 59.930 52.381 0.00 0.00 46.31 4.57
363 404 3.469008 TTGAGTGGTAGTCCAGTTGTG 57.531 47.619 0.00 0.00 46.31 3.33
364 405 4.706842 AATTGAGTGGTAGTCCAGTTGT 57.293 40.909 0.00 0.00 46.31 3.32
365 406 6.348540 GCTAAAATTGAGTGGTAGTCCAGTTG 60.349 42.308 0.00 0.00 46.31 3.16
366 407 5.705905 GCTAAAATTGAGTGGTAGTCCAGTT 59.294 40.000 0.00 0.00 46.31 3.16
368 409 4.330074 CGCTAAAATTGAGTGGTAGTCCAG 59.670 45.833 0.00 0.00 45.24 3.86
369 410 4.250464 CGCTAAAATTGAGTGGTAGTCCA 58.750 43.478 0.00 0.00 42.05 4.02
370 411 3.063588 GCGCTAAAATTGAGTGGTAGTCC 59.936 47.826 0.00 0.00 0.00 3.85
371 412 3.241995 CGCGCTAAAATTGAGTGGTAGTC 60.242 47.826 5.56 0.00 0.00 2.59
372 413 2.671396 CGCGCTAAAATTGAGTGGTAGT 59.329 45.455 5.56 0.00 0.00 2.73
373 414 2.671396 ACGCGCTAAAATTGAGTGGTAG 59.329 45.455 5.73 0.00 0.00 3.18
374 415 2.669434 GACGCGCTAAAATTGAGTGGTA 59.331 45.455 5.73 0.00 0.00 3.25
375 416 1.463444 GACGCGCTAAAATTGAGTGGT 59.537 47.619 5.73 0.00 0.00 4.16
376 417 1.526986 CGACGCGCTAAAATTGAGTGG 60.527 52.381 5.73 0.00 0.00 4.00
377 418 1.388768 TCGACGCGCTAAAATTGAGTG 59.611 47.619 5.73 0.00 0.00 3.51
378 419 1.705256 TCGACGCGCTAAAATTGAGT 58.295 45.000 5.73 0.00 0.00 3.41
379 420 2.780361 TTCGACGCGCTAAAATTGAG 57.220 45.000 5.73 0.00 0.00 3.02
380 421 3.484557 GGAATTCGACGCGCTAAAATTGA 60.485 43.478 5.73 0.00 0.00 2.57
381 422 2.776225 GGAATTCGACGCGCTAAAATTG 59.224 45.455 5.73 0.00 0.00 2.32
382 423 2.417239 TGGAATTCGACGCGCTAAAATT 59.583 40.909 5.73 7.55 0.00 1.82
383 424 2.004017 TGGAATTCGACGCGCTAAAAT 58.996 42.857 5.73 0.00 0.00 1.82
384 425 1.127213 GTGGAATTCGACGCGCTAAAA 59.873 47.619 5.73 0.00 0.00 1.52
385 426 0.717224 GTGGAATTCGACGCGCTAAA 59.283 50.000 5.73 0.00 0.00 1.85
386 427 1.407721 CGTGGAATTCGACGCGCTAA 61.408 55.000 26.30 0.00 40.81 3.09
387 428 1.870458 CGTGGAATTCGACGCGCTA 60.870 57.895 26.30 0.00 40.81 4.26
388 429 3.179265 CGTGGAATTCGACGCGCT 61.179 61.111 26.30 0.00 40.81 5.92
389 430 3.176578 TCGTGGAATTCGACGCGC 61.177 61.111 30.76 9.92 45.54 6.86
390 431 2.687436 GTCGTGGAATTCGACGCG 59.313 61.111 30.76 20.64 45.54 6.01
394 435 0.238025 TCGTTCGTCGTGGAATTCGA 59.762 50.000 0.00 0.00 40.80 3.71
395 436 0.361184 GTCGTTCGTCGTGGAATTCG 59.639 55.000 0.00 0.00 40.80 3.34
396 437 1.385743 CAGTCGTTCGTCGTGGAATTC 59.614 52.381 0.00 0.00 40.80 2.17
397 438 1.415374 CAGTCGTTCGTCGTGGAATT 58.585 50.000 0.00 0.00 40.80 2.17
398 439 0.388134 CCAGTCGTTCGTCGTGGAAT 60.388 55.000 0.00 0.00 37.73 3.01
399 440 1.008194 CCAGTCGTTCGTCGTGGAA 60.008 57.895 0.00 0.00 37.73 3.53
400 441 0.884259 TACCAGTCGTTCGTCGTGGA 60.884 55.000 14.77 0.00 37.73 4.02
401 442 0.169672 ATACCAGTCGTTCGTCGTGG 59.830 55.000 9.38 9.38 40.19 4.94
402 443 1.256652 CATACCAGTCGTTCGTCGTG 58.743 55.000 0.00 0.00 40.80 4.35
403 444 0.169672 CCATACCAGTCGTTCGTCGT 59.830 55.000 0.00 0.00 40.80 4.34
404 445 0.448990 TCCATACCAGTCGTTCGTCG 59.551 55.000 0.00 0.00 41.41 5.12
405 446 2.642139 TTCCATACCAGTCGTTCGTC 57.358 50.000 0.00 0.00 0.00 4.20
406 447 2.494471 TGATTCCATACCAGTCGTTCGT 59.506 45.455 0.00 0.00 0.00 3.85
407 448 3.159353 TGATTCCATACCAGTCGTTCG 57.841 47.619 0.00 0.00 0.00 3.95
408 449 4.935808 ACTTTGATTCCATACCAGTCGTTC 59.064 41.667 0.00 0.00 0.00 3.95
409 450 4.906618 ACTTTGATTCCATACCAGTCGTT 58.093 39.130 0.00 0.00 0.00 3.85
410 451 4.020573 TGACTTTGATTCCATACCAGTCGT 60.021 41.667 0.00 0.00 33.33 4.34
411 452 4.503910 TGACTTTGATTCCATACCAGTCG 58.496 43.478 0.00 0.00 33.33 4.18
412 453 6.115446 TCATGACTTTGATTCCATACCAGTC 58.885 40.000 0.00 0.00 0.00 3.51
413 454 6.065976 TCATGACTTTGATTCCATACCAGT 57.934 37.500 0.00 0.00 0.00 4.00
414 455 6.039047 CCTTCATGACTTTGATTCCATACCAG 59.961 42.308 0.00 0.00 0.00 4.00
415 456 5.887598 CCTTCATGACTTTGATTCCATACCA 59.112 40.000 0.00 0.00 0.00 3.25
416 457 6.122277 TCCTTCATGACTTTGATTCCATACC 58.878 40.000 0.00 0.00 0.00 2.73
417 458 7.630242 TTCCTTCATGACTTTGATTCCATAC 57.370 36.000 0.00 0.00 0.00 2.39
418 459 8.827832 ATTTCCTTCATGACTTTGATTCCATA 57.172 30.769 0.00 0.00 0.00 2.74
419 460 7.729124 ATTTCCTTCATGACTTTGATTCCAT 57.271 32.000 0.00 0.00 0.00 3.41
420 461 7.122650 GGTATTTCCTTCATGACTTTGATTCCA 59.877 37.037 0.00 0.00 0.00 3.53
421 462 7.122650 TGGTATTTCCTTCATGACTTTGATTCC 59.877 37.037 0.00 0.00 37.07 3.01
422 463 7.970614 GTGGTATTTCCTTCATGACTTTGATTC 59.029 37.037 0.00 0.00 37.07 2.52
423 464 7.362056 CGTGGTATTTCCTTCATGACTTTGATT 60.362 37.037 0.00 0.00 37.07 2.57
424 465 6.094048 CGTGGTATTTCCTTCATGACTTTGAT 59.906 38.462 0.00 0.00 37.07 2.57
425 466 5.411361 CGTGGTATTTCCTTCATGACTTTGA 59.589 40.000 0.00 0.00 37.07 2.69
426 467 5.411361 TCGTGGTATTTCCTTCATGACTTTG 59.589 40.000 0.00 0.00 37.07 2.77
427 468 5.556915 TCGTGGTATTTCCTTCATGACTTT 58.443 37.500 0.00 0.00 37.07 2.66
428 469 5.160607 TCGTGGTATTTCCTTCATGACTT 57.839 39.130 0.00 0.00 37.07 3.01
429 470 4.819105 TCGTGGTATTTCCTTCATGACT 57.181 40.909 0.00 0.00 37.07 3.41
430 471 5.116180 TCATCGTGGTATTTCCTTCATGAC 58.884 41.667 0.00 0.00 37.07 3.06
431 472 5.351948 TCATCGTGGTATTTCCTTCATGA 57.648 39.130 0.00 0.00 37.07 3.07
432 473 6.624352 ATTCATCGTGGTATTTCCTTCATG 57.376 37.500 0.00 0.00 37.07 3.07
433 474 6.263168 GGAATTCATCGTGGTATTTCCTTCAT 59.737 38.462 7.93 0.00 37.07 2.57
434 475 5.588648 GGAATTCATCGTGGTATTTCCTTCA 59.411 40.000 7.93 0.00 37.07 3.02
435 476 5.588648 TGGAATTCATCGTGGTATTTCCTTC 59.411 40.000 7.93 0.00 37.07 3.46
436 477 5.357032 GTGGAATTCATCGTGGTATTTCCTT 59.643 40.000 7.93 0.00 37.07 3.36
437 478 4.881850 GTGGAATTCATCGTGGTATTTCCT 59.118 41.667 7.93 0.00 37.07 3.36
438 479 4.260620 CGTGGAATTCATCGTGGTATTTCC 60.261 45.833 7.93 0.00 0.00 3.13
439 480 4.569162 TCGTGGAATTCATCGTGGTATTTC 59.431 41.667 7.93 0.00 0.00 2.17
440 481 4.331717 GTCGTGGAATTCATCGTGGTATTT 59.668 41.667 7.93 0.00 0.00 1.40
441 482 3.869246 GTCGTGGAATTCATCGTGGTATT 59.131 43.478 7.93 0.00 0.00 1.89
442 483 3.454375 GTCGTGGAATTCATCGTGGTAT 58.546 45.455 7.93 0.00 0.00 2.73
443 484 2.732912 CGTCGTGGAATTCATCGTGGTA 60.733 50.000 7.93 0.00 0.00 3.25
444 485 1.722011 GTCGTGGAATTCATCGTGGT 58.278 50.000 7.93 0.00 0.00 4.16
445 486 0.645355 CGTCGTGGAATTCATCGTGG 59.355 55.000 7.93 4.51 0.00 4.94
446 487 1.624487 TCGTCGTGGAATTCATCGTG 58.376 50.000 7.93 8.44 0.00 4.35
447 488 1.990563 GTTCGTCGTGGAATTCATCGT 59.009 47.619 7.93 0.00 0.00 3.73
448 489 1.007422 CGTTCGTCGTGGAATTCATCG 60.007 52.381 7.93 10.97 34.52 3.84
449 490 2.256174 TCGTTCGTCGTGGAATTCATC 58.744 47.619 7.93 0.00 40.80 2.92
450 491 2.357327 TCGTTCGTCGTGGAATTCAT 57.643 45.000 7.93 0.00 40.80 2.57
451 492 1.788308 GTTCGTTCGTCGTGGAATTCA 59.212 47.619 7.93 0.00 40.80 2.57
452 493 1.201629 CGTTCGTTCGTCGTGGAATTC 60.202 52.381 0.00 0.00 40.80 2.17
453 494 0.780002 CGTTCGTTCGTCGTGGAATT 59.220 50.000 0.00 0.00 40.80 2.17
454 495 0.040157 TCGTTCGTTCGTCGTGGAAT 60.040 50.000 0.00 0.00 40.80 3.01
455 496 0.929824 GTCGTTCGTTCGTCGTGGAA 60.930 55.000 0.00 0.00 40.80 3.53
456 497 1.369209 GTCGTTCGTTCGTCGTGGA 60.369 57.895 0.00 0.00 40.80 4.02
457 498 1.655046 TGTCGTTCGTTCGTCGTGG 60.655 57.895 0.00 0.00 40.80 4.94
458 499 1.475810 GTGTCGTTCGTTCGTCGTG 59.524 57.895 0.00 0.00 40.80 4.35
459 500 2.000323 CGTGTCGTTCGTTCGTCGT 61.000 57.895 0.00 0.00 40.80 4.34
460 501 2.690817 CCGTGTCGTTCGTTCGTCG 61.691 63.158 0.00 0.00 41.41 5.12
461 502 1.655350 ACCGTGTCGTTCGTTCGTC 60.655 57.895 2.67 0.00 0.00 4.20
462 503 1.940758 CACCGTGTCGTTCGTTCGT 60.941 57.895 0.00 0.00 0.00 3.85
463 504 2.834560 CACCGTGTCGTTCGTTCG 59.165 61.111 0.00 0.00 0.00 3.95
464 505 1.947642 AGCACCGTGTCGTTCGTTC 60.948 57.895 0.00 0.00 0.00 3.95
465 506 2.105528 AGCACCGTGTCGTTCGTT 59.894 55.556 0.00 0.00 0.00 3.85
466 507 2.657296 CAGCACCGTGTCGTTCGT 60.657 61.111 0.00 0.00 0.00 3.85
467 508 4.059459 GCAGCACCGTGTCGTTCG 62.059 66.667 0.00 0.00 0.00 3.95
468 509 3.712881 GGCAGCACCGTGTCGTTC 61.713 66.667 0.00 0.00 0.00 3.95
469 510 4.235762 AGGCAGCACCGTGTCGTT 62.236 61.111 0.00 0.00 46.52 3.85
470 511 4.969196 CAGGCAGCACCGTGTCGT 62.969 66.667 0.00 0.00 46.52 4.34
471 512 4.969196 ACAGGCAGCACCGTGTCG 62.969 66.667 0.00 0.00 46.52 4.35
472 513 3.044305 GACAGGCAGCACCGTGTC 61.044 66.667 11.78 11.78 46.52 3.67
476 517 2.557059 TATGACGACAGGCAGCACCG 62.557 60.000 0.00 0.00 46.52 4.94
507 548 1.005037 TAGGGAAGTGCAGTGCGTG 60.005 57.895 11.20 0.00 0.00 5.34
508 549 1.293498 CTAGGGAAGTGCAGTGCGT 59.707 57.895 11.20 0.00 0.00 5.24
509 550 1.448540 CCTAGGGAAGTGCAGTGCG 60.449 63.158 11.20 0.00 0.00 5.34
550 592 3.268013 GCTCGCTGCACTTTTCTAAAA 57.732 42.857 0.00 0.00 42.31 1.52
562 688 1.453148 GAACAAACAAATGCTCGCTGC 59.547 47.619 0.00 0.00 43.25 5.25
563 689 2.722629 CTGAACAAACAAATGCTCGCTG 59.277 45.455 0.00 0.00 0.00 5.18
757 901 1.405872 AGTATGTATGTCCGGGCGAA 58.594 50.000 0.00 0.00 0.00 4.70
774 919 1.957695 GGCGAAAACGACGGGAAGT 60.958 57.895 0.00 0.00 0.00 3.01
849 1026 2.107950 TATTTGAGCTCCAACCACGG 57.892 50.000 12.15 0.00 33.85 4.94
852 1029 5.010617 GGTTTCTTTATTTGAGCTCCAACCA 59.989 40.000 12.15 0.00 33.85 3.67
853 1030 5.470368 GGTTTCTTTATTTGAGCTCCAACC 58.530 41.667 12.15 5.83 33.85 3.77
856 1033 4.647611 TCGGTTTCTTTATTTGAGCTCCA 58.352 39.130 12.15 0.00 0.00 3.86
862 1039 3.816523 AGCGGTTCGGTTTCTTTATTTGA 59.183 39.130 0.00 0.00 32.22 2.69
864 1041 3.189910 GGAGCGGTTCGGTTTCTTTATTT 59.810 43.478 0.00 0.00 37.83 1.40
958 3699 2.185387 GGTATATATGGGACGGGCACT 58.815 52.381 0.00 0.00 0.00 4.40
960 3701 2.328992 TGGTATATATGGGACGGGCA 57.671 50.000 0.00 0.00 0.00 5.36
979 3756 3.397849 GAACCAAACTAGGGTCGTCTT 57.602 47.619 0.00 0.00 37.77 3.01
1014 4411 0.991920 GGGAGTGGGAGGTTGATTGA 59.008 55.000 0.00 0.00 0.00 2.57
1044 4445 0.385390 CTTGCAGTGGGTTGTTGGTC 59.615 55.000 0.00 0.00 0.00 4.02
1073 4482 2.887568 CCATGTCGAGCTCGTGCC 60.888 66.667 33.33 22.35 40.80 5.01
1232 4641 4.385405 GGCACTCCTCGCTGCAGT 62.385 66.667 16.64 0.00 34.90 4.40
1430 4877 4.903010 ACGGCGGTTTCGTGCACT 62.903 61.111 16.19 0.00 39.55 4.40
1469 4919 1.824329 GAGTCTCCTCGATCCCGCA 60.824 63.158 0.00 0.00 35.37 5.69
1564 5026 0.846427 ATCCAGTCCAGCCCCTTCAA 60.846 55.000 0.00 0.00 0.00 2.69
1600 5088 3.559238 AATTGCGTGGTGAATCTTGTC 57.441 42.857 0.00 0.00 0.00 3.18
1813 5346 1.274167 GTGTGGTAGACATCCAACGGA 59.726 52.381 0.00 0.00 36.78 4.69
1845 5386 4.218417 CACCCCAGGTCTAGAACAAAATTG 59.782 45.833 11.14 0.00 31.02 2.32
1913 5455 7.377397 TCGACCGAGATTGTTTTAATTTTTGTG 59.623 33.333 0.00 0.00 0.00 3.33
1962 5504 3.160679 AGGCCAAAACTAGACTGCATT 57.839 42.857 5.01 0.00 0.00 3.56
1963 5505 2.821969 CAAGGCCAAAACTAGACTGCAT 59.178 45.455 5.01 0.00 0.00 3.96
1965 5507 2.485814 CTCAAGGCCAAAACTAGACTGC 59.514 50.000 5.01 0.00 0.00 4.40
1991 5534 2.351738 GCGGTGCAGCTAGTTGAAATTT 60.352 45.455 14.92 0.00 0.00 1.82
2003 5546 0.521242 CGTTATTTCAGCGGTGCAGC 60.521 55.000 10.38 5.64 37.41 5.25
2004 5547 0.796312 ACGTTATTTCAGCGGTGCAG 59.204 50.000 10.38 0.00 34.79 4.41
2005 5548 1.069568 CAACGTTATTTCAGCGGTGCA 60.070 47.619 10.38 0.00 41.77 4.57
2006 5549 1.602191 CAACGTTATTTCAGCGGTGC 58.398 50.000 10.38 0.00 41.77 5.01
2008 5551 3.974871 AAACAACGTTATTTCAGCGGT 57.025 38.095 0.00 0.00 34.79 5.68
2009 5552 4.147479 GGAAAAACAACGTTATTTCAGCGG 59.853 41.667 23.39 5.63 34.79 5.52
2010 5553 4.143906 CGGAAAAACAACGTTATTTCAGCG 60.144 41.667 23.39 17.90 34.31 5.18
2011 5554 4.736307 ACGGAAAAACAACGTTATTTCAGC 59.264 37.500 23.39 10.86 37.61 4.26
2012 5555 8.414173 CAATACGGAAAAACAACGTTATTTCAG 58.586 33.333 23.39 22.09 41.53 3.02
2013 5556 7.914346 ACAATACGGAAAAACAACGTTATTTCA 59.086 29.630 23.39 11.76 41.53 2.69
2014 5557 8.202697 CACAATACGGAAAAACAACGTTATTTC 58.797 33.333 18.04 18.04 41.53 2.17
2015 5558 7.701501 ACACAATACGGAAAAACAACGTTATTT 59.298 29.630 0.00 0.00 41.53 1.40
2016 5559 7.166142 CACACAATACGGAAAAACAACGTTATT 59.834 33.333 0.00 0.00 41.53 1.40
2017 5560 6.633634 CACACAATACGGAAAAACAACGTTAT 59.366 34.615 0.00 0.00 41.53 1.89
2018 5561 5.964168 CACACAATACGGAAAAACAACGTTA 59.036 36.000 0.00 0.00 41.53 3.18
2019 5562 4.794246 CACACAATACGGAAAAACAACGTT 59.206 37.500 0.00 0.00 41.53 3.99
2020 5563 4.142643 ACACACAATACGGAAAAACAACGT 60.143 37.500 0.00 0.00 43.88 3.99
2021 5564 4.344448 ACACACAATACGGAAAAACAACG 58.656 39.130 0.00 0.00 0.00 4.10
2022 5565 5.333513 TGACACACAATACGGAAAAACAAC 58.666 37.500 0.00 0.00 0.00 3.32
2023 5566 5.354513 TCTGACACACAATACGGAAAAACAA 59.645 36.000 0.00 0.00 0.00 2.83
2024 5567 4.876679 TCTGACACACAATACGGAAAAACA 59.123 37.500 0.00 0.00 0.00 2.83
2025 5568 5.412526 TCTGACACACAATACGGAAAAAC 57.587 39.130 0.00 0.00 0.00 2.43
2026 5569 5.529430 ACATCTGACACACAATACGGAAAAA 59.471 36.000 0.00 0.00 0.00 1.94
2027 5570 5.060506 ACATCTGACACACAATACGGAAAA 58.939 37.500 0.00 0.00 0.00 2.29
2028 5571 4.637276 ACATCTGACACACAATACGGAAA 58.363 39.130 0.00 0.00 0.00 3.13
2029 5572 4.265904 ACATCTGACACACAATACGGAA 57.734 40.909 0.00 0.00 0.00 4.30
2030 5573 3.953712 ACATCTGACACACAATACGGA 57.046 42.857 0.00 0.00 0.00 4.69
2031 5574 6.978659 AGTATAACATCTGACACACAATACGG 59.021 38.462 0.00 0.00 0.00 4.02
2032 5575 7.167635 GGAGTATAACATCTGACACACAATACG 59.832 40.741 0.00 0.00 0.00 3.06
2033 5576 7.438459 GGGAGTATAACATCTGACACACAATAC 59.562 40.741 0.00 0.00 0.00 1.89
2034 5577 7.344612 AGGGAGTATAACATCTGACACACAATA 59.655 37.037 0.00 0.00 0.00 1.90
2035 5578 6.156949 AGGGAGTATAACATCTGACACACAAT 59.843 38.462 0.00 0.00 0.00 2.71
2036 5579 5.483937 AGGGAGTATAACATCTGACACACAA 59.516 40.000 0.00 0.00 0.00 3.33
2037 5580 5.023452 AGGGAGTATAACATCTGACACACA 58.977 41.667 0.00 0.00 0.00 3.72
2038 5581 5.452077 GGAGGGAGTATAACATCTGACACAC 60.452 48.000 0.00 0.00 0.00 3.82
2039 5582 4.649674 GGAGGGAGTATAACATCTGACACA 59.350 45.833 0.00 0.00 0.00 3.72
2040 5583 4.261656 CGGAGGGAGTATAACATCTGACAC 60.262 50.000 0.00 0.00 0.00 3.67
2041 5584 3.889538 CGGAGGGAGTATAACATCTGACA 59.110 47.826 0.00 0.00 0.00 3.58
2042 5585 3.890147 ACGGAGGGAGTATAACATCTGAC 59.110 47.826 0.00 0.00 0.00 3.51
2043 5586 4.142790 GACGGAGGGAGTATAACATCTGA 58.857 47.826 0.00 0.00 0.00 3.27
2044 5587 3.256136 GGACGGAGGGAGTATAACATCTG 59.744 52.174 0.00 0.00 0.00 2.90
2045 5588 3.498334 GGACGGAGGGAGTATAACATCT 58.502 50.000 0.00 0.00 0.00 2.90
2046 5589 2.561858 GGGACGGAGGGAGTATAACATC 59.438 54.545 0.00 0.00 0.00 3.06
2047 5590 2.090943 TGGGACGGAGGGAGTATAACAT 60.091 50.000 0.00 0.00 0.00 2.71
2048 5591 1.288633 TGGGACGGAGGGAGTATAACA 59.711 52.381 0.00 0.00 0.00 2.41
2049 5592 2.077687 TGGGACGGAGGGAGTATAAC 57.922 55.000 0.00 0.00 0.00 1.89
2050 5593 4.474303 TTATGGGACGGAGGGAGTATAA 57.526 45.455 0.00 0.00 0.00 0.98
2051 5594 4.687262 ATTATGGGACGGAGGGAGTATA 57.313 45.455 0.00 0.00 0.00 1.47
2052 5595 3.562108 ATTATGGGACGGAGGGAGTAT 57.438 47.619 0.00 0.00 0.00 2.12
2053 5596 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
2054 5597 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
2055 5598 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2056 5599 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
2057 5600 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
2058 5601 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
2059 5602 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
2060 5603 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
2061 5604 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
2062 5605 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
2063 5606 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
2064 5607 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
2065 5608 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
2066 5609 7.582679 CGTGTCAAAAACGCTCTTATATTATGG 59.417 37.037 0.00 0.00 36.18 2.74
2067 5610 7.582679 CCGTGTCAAAAACGCTCTTATATTATG 59.417 37.037 0.00 0.00 39.69 1.90
2068 5611 7.493320 TCCGTGTCAAAAACGCTCTTATATTAT 59.507 33.333 0.00 0.00 39.69 1.28
2069 5612 6.812656 TCCGTGTCAAAAACGCTCTTATATTA 59.187 34.615 0.00 0.00 39.69 0.98
2070 5613 5.640357 TCCGTGTCAAAAACGCTCTTATATT 59.360 36.000 0.00 0.00 39.69 1.28
2071 5614 5.172934 TCCGTGTCAAAAACGCTCTTATAT 58.827 37.500 0.00 0.00 39.69 0.86
2072 5615 4.558178 TCCGTGTCAAAAACGCTCTTATA 58.442 39.130 0.00 0.00 39.69 0.98
2073 5616 3.395639 TCCGTGTCAAAAACGCTCTTAT 58.604 40.909 0.00 0.00 39.69 1.73
2074 5617 2.798283 CTCCGTGTCAAAAACGCTCTTA 59.202 45.455 0.00 0.00 39.69 2.10
2075 5618 1.597663 CTCCGTGTCAAAAACGCTCTT 59.402 47.619 0.00 0.00 39.69 2.85
2076 5619 1.217882 CTCCGTGTCAAAAACGCTCT 58.782 50.000 0.00 0.00 39.69 4.09
2077 5620 0.234884 CCTCCGTGTCAAAAACGCTC 59.765 55.000 0.00 0.00 39.69 5.03
2078 5621 1.164041 CCCTCCGTGTCAAAAACGCT 61.164 55.000 0.00 0.00 39.69 5.07
2079 5622 1.161563 TCCCTCCGTGTCAAAAACGC 61.162 55.000 0.00 0.00 39.69 4.84
2080 5623 0.865769 CTCCCTCCGTGTCAAAAACG 59.134 55.000 0.00 0.00 40.70 3.60
2081 5624 1.963172 ACTCCCTCCGTGTCAAAAAC 58.037 50.000 0.00 0.00 0.00 2.43
2082 5625 3.581332 AGATACTCCCTCCGTGTCAAAAA 59.419 43.478 0.00 0.00 0.00 1.94
2083 5626 3.170717 AGATACTCCCTCCGTGTCAAAA 58.829 45.455 0.00 0.00 0.00 2.44
2084 5627 2.816411 AGATACTCCCTCCGTGTCAAA 58.184 47.619 0.00 0.00 0.00 2.69
2085 5628 2.496070 CAAGATACTCCCTCCGTGTCAA 59.504 50.000 0.00 0.00 0.00 3.18
2086 5629 2.100197 CAAGATACTCCCTCCGTGTCA 58.900 52.381 0.00 0.00 0.00 3.58
2087 5630 1.202428 GCAAGATACTCCCTCCGTGTC 60.202 57.143 0.00 0.00 0.00 3.67
2088 5631 0.824759 GCAAGATACTCCCTCCGTGT 59.175 55.000 0.00 0.00 0.00 4.49
2089 5632 1.115467 AGCAAGATACTCCCTCCGTG 58.885 55.000 0.00 0.00 0.00 4.94
2090 5633 1.867363 AAGCAAGATACTCCCTCCGT 58.133 50.000 0.00 0.00 0.00 4.69
2091 5634 2.693591 TGTAAGCAAGATACTCCCTCCG 59.306 50.000 0.00 0.00 0.00 4.63
2092 5635 4.329462 CTGTAAGCAAGATACTCCCTCC 57.671 50.000 0.00 0.00 0.00 4.30
2140 5683 1.071605 GGTGCTCTCGCTGTAAACAG 58.928 55.000 5.73 5.73 46.40 3.16
2141 5684 0.320421 GGGTGCTCTCGCTGTAAACA 60.320 55.000 0.00 0.00 36.97 2.83
2142 5685 1.352156 CGGGTGCTCTCGCTGTAAAC 61.352 60.000 0.00 0.00 36.97 2.01
2143 5686 1.080093 CGGGTGCTCTCGCTGTAAA 60.080 57.895 0.00 0.00 36.97 2.01
2144 5687 2.571757 CGGGTGCTCTCGCTGTAA 59.428 61.111 0.00 0.00 36.97 2.41
2145 5688 3.449227 CCGGGTGCTCTCGCTGTA 61.449 66.667 1.65 0.00 36.97 2.74
2177 5720 4.258543 ACAACTCTTGAAGAACAAACCGA 58.741 39.130 0.00 0.00 38.08 4.69
2273 5816 2.954318 ACAATGTTTGCAGAGTTGAGCT 59.046 40.909 8.69 0.00 0.00 4.09
2342 5885 1.684450 TCGCGTGGATGAGGCTAATAA 59.316 47.619 5.77 0.00 33.01 1.40
2449 5992 6.909550 ATTGTCATGGATACTCCTAGTCTC 57.090 41.667 0.00 0.00 37.46 3.36
2710 6254 3.017581 ATCCCCTTGCCGGAAGCT 61.018 61.111 5.05 0.00 44.23 3.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.