Multiple sequence alignment - TraesCS2D01G453300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G453300 chr2D 100.000 2378 0 0 1 2378 562267028 562269405 0.000000e+00 4392.0
1 TraesCS2D01G453300 chr2D 83.682 1863 160 59 1 1790 562234287 562236078 0.000000e+00 1624.0
2 TraesCS2D01G453300 chr2D 82.099 905 74 42 1024 1879 562353697 562354562 0.000000e+00 693.0
3 TraesCS2D01G453300 chr2D 81.047 955 99 40 716 1610 562340676 562341608 0.000000e+00 686.0
4 TraesCS2D01G453300 chr2D 81.798 445 48 24 1944 2378 411688626 411688205 2.260000e-90 342.0
5 TraesCS2D01G453300 chr2D 81.297 401 45 14 871 1244 562307997 562308394 4.970000e-77 298.0
6 TraesCS2D01G453300 chr2D 88.780 205 20 1 1024 1228 563009023 563009224 5.080000e-62 248.0
7 TraesCS2D01G453300 chr2D 89.529 191 17 2 1024 1214 562581341 562581528 3.050000e-59 239.0
8 TraesCS2D01G453300 chr2D 86.404 228 16 6 999 1214 562449271 562449495 3.950000e-58 235.0
9 TraesCS2D01G453300 chr2D 86.099 223 23 6 1024 1244 562850871 562851087 1.420000e-57 233.0
10 TraesCS2D01G453300 chr2D 84.513 226 17 9 605 828 562306430 562306639 8.610000e-50 207.0
11 TraesCS2D01G453300 chr2D 92.000 75 3 2 903 974 562353532 562353606 4.180000e-18 102.0
12 TraesCS2D01G453300 chr2D 100.000 29 0 0 1004 1032 562581309 562581337 1.000000e-03 54.7
13 TraesCS2D01G453300 chr2B 88.097 1361 90 28 1 1314 672022227 672023562 0.000000e+00 1550.0
14 TraesCS2D01G453300 chr2B 83.112 1054 97 38 661 1659 671909881 671910908 0.000000e+00 885.0
15 TraesCS2D01G453300 chr2B 81.667 900 99 28 1024 1879 672059583 672060460 0.000000e+00 688.0
16 TraesCS2D01G453300 chr2B 85.735 687 53 23 1 669 671903542 671904201 0.000000e+00 684.0
17 TraesCS2D01G453300 chr2B 84.235 425 59 8 1959 2378 780205667 780205246 7.910000e-110 407.0
18 TraesCS2D01G453300 chr2B 82.675 456 55 15 1348 1780 672023561 672024015 1.330000e-102 383.0
19 TraesCS2D01G453300 chr2B 88.182 220 18 6 1027 1244 673170725 673170938 3.030000e-64 255.0
20 TraesCS2D01G453300 chr2B 93.023 43 2 1 999 1041 672099029 672099070 7.100000e-06 62.1
21 TraesCS2D01G453300 chr2A 80.932 1846 176 91 1 1756 702939268 702941027 0.000000e+00 1297.0
22 TraesCS2D01G453300 chr2A 78.785 1136 119 60 815 1865 702956670 702957768 0.000000e+00 651.0
23 TraesCS2D01G453300 chr2A 79.944 713 51 36 931 1595 702950939 702951607 7.800000e-120 440.0
24 TraesCS2D01G453300 chr2A 94.054 185 10 1 1607 1790 702953315 702953499 1.800000e-71 279.0
25 TraesCS2D01G453300 chr2A 85.772 246 31 2 1027 1272 703095475 703095716 8.430000e-65 257.0
26 TraesCS2D01G453300 chr2A 85.328 259 24 8 1024 1273 703353853 703354106 3.030000e-64 255.0
27 TraesCS2D01G453300 chr2A 86.547 223 15 6 999 1209 703105816 703106035 5.110000e-57 231.0
28 TraesCS2D01G453300 chr2A 85.965 228 17 5 999 1214 703111023 703111247 1.840000e-56 230.0
29 TraesCS2D01G453300 chr6D 84.199 443 46 21 1943 2378 716991 717416 2.200000e-110 409.0
30 TraesCS2D01G453300 chr1D 84.234 444 45 20 1942 2378 413958219 413957794 2.200000e-110 409.0
31 TraesCS2D01G453300 chr1D 84.783 368 44 10 2015 2378 79781453 79781812 2.250000e-95 359.0
32 TraesCS2D01G453300 chr6A 83.886 422 61 7 1959 2377 4805050 4804633 1.710000e-106 396.0
33 TraesCS2D01G453300 chr3D 83.258 442 50 19 1943 2378 7281015 7281438 3.710000e-103 385.0
34 TraesCS2D01G453300 chr6B 85.269 353 43 6 2034 2378 181834171 181833820 2.910000e-94 355.0
35 TraesCS2D01G453300 chr4A 83.880 366 44 13 2015 2374 741985407 741985763 3.790000e-88 335.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G453300 chr2D 562267028 562269405 2377 False 4392.000000 4392 100.0000 1 2378 1 chr2D.!!$F2 2377
1 TraesCS2D01G453300 chr2D 562234287 562236078 1791 False 1624.000000 1624 83.6820 1 1790 1 chr2D.!!$F1 1789
2 TraesCS2D01G453300 chr2D 562340676 562341608 932 False 686.000000 686 81.0470 716 1610 1 chr2D.!!$F3 894
3 TraesCS2D01G453300 chr2D 562353532 562354562 1030 False 397.500000 693 87.0495 903 1879 2 chr2D.!!$F8 976
4 TraesCS2D01G453300 chr2D 562306430 562308394 1964 False 252.500000 298 82.9050 605 1244 2 chr2D.!!$F7 639
5 TraesCS2D01G453300 chr2B 672022227 672024015 1788 False 966.500000 1550 85.3860 1 1780 2 chr2B.!!$F6 1779
6 TraesCS2D01G453300 chr2B 671909881 671910908 1027 False 885.000000 885 83.1120 661 1659 1 chr2B.!!$F2 998
7 TraesCS2D01G453300 chr2B 672059583 672060460 877 False 688.000000 688 81.6670 1024 1879 1 chr2B.!!$F3 855
8 TraesCS2D01G453300 chr2B 671903542 671904201 659 False 684.000000 684 85.7350 1 669 1 chr2B.!!$F1 668
9 TraesCS2D01G453300 chr2A 702939268 702941027 1759 False 1297.000000 1297 80.9320 1 1756 1 chr2A.!!$F1 1755
10 TraesCS2D01G453300 chr2A 702950939 702957768 6829 False 456.666667 651 84.2610 815 1865 3 chr2A.!!$F6 1050

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
877 7162 0.521659 GGACTTCTTCTCTCGTCGCG 60.522 60.0 0.0 0.0 0.0 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2288 8749 0.03213 TTGTAGCGATGGAGGCGATC 59.968 55.0 0.0 0.0 35.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 4.722700 ACATGTGCGGCCACCTCC 62.723 66.667 2.24 0.00 41.35 4.30
187 188 2.814336 AGAACGGCACCTTGATTTCTTC 59.186 45.455 0.00 0.00 0.00 2.87
308 322 2.520500 TTGGCGAAAAGGCTGGCA 60.521 55.556 3.38 0.00 46.88 4.92
351 365 1.263217 GGTCCGCATTAGTTTATGCCG 59.737 52.381 0.00 0.00 46.40 5.69
435 450 5.856126 TCTTTCGCGCTTATATTATTGGG 57.144 39.130 5.56 0.00 0.00 4.12
450 465 8.747538 ATATTATTGGGGCGAATATTTAGTCC 57.252 34.615 6.89 6.89 0.00 3.85
633 682 2.300850 TACGTTGCTATCGGTGGCCC 62.301 60.000 0.00 0.00 0.00 5.80
775 825 1.668751 GAGCCCGCGAATAATGAAACA 59.331 47.619 8.23 0.00 0.00 2.83
779 829 3.788797 GCCCGCGAATAATGAAACAGAAG 60.789 47.826 8.23 0.00 0.00 2.85
877 7162 0.521659 GGACTTCTTCTCTCGTCGCG 60.522 60.000 0.00 0.00 0.00 5.87
917 7229 2.497675 CGCAGGCATATATACCCAGACT 59.502 50.000 0.00 0.00 0.00 3.24
952 7269 3.319972 AGCACAGCAAACACTCAATCAAT 59.680 39.130 0.00 0.00 0.00 2.57
980 7297 2.730604 CGGCGCACCAAAAGCAAG 60.731 61.111 10.83 0.00 34.57 4.01
1109 7475 3.445450 AGCGACATCTTCATGTACAGAGT 59.555 43.478 0.33 0.00 43.79 3.24
1289 7673 3.254654 CGGCATGCTCCGTACGTG 61.255 66.667 18.92 6.48 44.18 4.49
1307 7691 1.135859 GTGCTTGAGCCAACAAGATCG 60.136 52.381 16.43 0.00 46.85 3.69
1354 7741 3.197790 CAACTGATCAGCGCGGGG 61.198 66.667 22.83 0.00 0.00 5.73
1392 7784 1.798813 GGTTGAAGAATCAAGACGCGT 59.201 47.619 13.85 13.85 45.88 6.01
1406 7802 1.591594 CGCGTGTCACTGGAGTTGT 60.592 57.895 0.00 0.00 0.00 3.32
1452 7857 0.476771 ACCGGTCAAGTGATTTGGGT 59.523 50.000 0.00 0.00 37.39 4.51
1553 7980 1.077858 GCCCCTCAGCTCTCCTTTG 60.078 63.158 0.00 0.00 0.00 2.77
1558 7985 2.072298 CCTCAGCTCTCCTTTGTTTCG 58.928 52.381 0.00 0.00 0.00 3.46
1559 7986 2.072298 CTCAGCTCTCCTTTGTTTCGG 58.928 52.381 0.00 0.00 0.00 4.30
1560 7987 0.519077 CAGCTCTCCTTTGTTTCGGC 59.481 55.000 0.00 0.00 0.00 5.54
1561 7988 0.108585 AGCTCTCCTTTGTTTCGGCA 59.891 50.000 0.00 0.00 0.00 5.69
1562 7989 1.168714 GCTCTCCTTTGTTTCGGCAT 58.831 50.000 0.00 0.00 0.00 4.40
1622 8075 5.560760 GCACTTTCACTGTCAATCGAATGAA 60.561 40.000 4.38 0.00 0.00 2.57
1718 8177 5.525199 GTTGGATGTTTACCACACGATTTT 58.475 37.500 0.00 0.00 38.61 1.82
1790 8249 5.599999 ACTAATCTGATGGCTAAACTCGT 57.400 39.130 0.00 0.00 0.00 4.18
1791 8250 5.352284 ACTAATCTGATGGCTAAACTCGTG 58.648 41.667 0.00 0.00 0.00 4.35
1800 8260 3.065648 TGGCTAAACTCGTGGACAAAAAC 59.934 43.478 0.00 0.00 0.00 2.43
1804 8264 6.134061 GCTAAACTCGTGGACAAAAACTAAG 58.866 40.000 0.00 0.00 0.00 2.18
1813 8273 5.236695 GTGGACAAAAACTAAGACAGTCTCC 59.763 44.000 2.72 0.00 36.04 3.71
1814 8274 5.104693 TGGACAAAAACTAAGACAGTCTCCA 60.105 40.000 2.72 0.03 36.04 3.86
1829 8290 3.701542 AGTCTCCATCGACTAAGCATCAA 59.298 43.478 0.00 0.00 42.19 2.57
1841 8302 5.615289 ACTAAGCATCAACAAGACAACTCT 58.385 37.500 0.00 0.00 0.00 3.24
1845 8306 4.449068 AGCATCAACAAGACAACTCTTACG 59.551 41.667 0.00 0.00 34.74 3.18
1848 8309 4.365723 TCAACAAGACAACTCTTACGGTC 58.634 43.478 0.00 0.00 34.74 4.79
1852 8313 4.022503 ACAAGACAACTCTTACGGTCCTAC 60.023 45.833 0.00 0.00 34.74 3.18
1869 8330 4.695928 GTCCTACTTTTGGCCTTGAGTTAG 59.304 45.833 3.32 0.00 0.00 2.34
1870 8331 4.010349 CCTACTTTTGGCCTTGAGTTAGG 58.990 47.826 3.32 3.42 38.40 2.69
1879 8340 5.332743 TGGCCTTGAGTTAGGAATTTCAAT 58.667 37.500 3.32 0.00 37.50 2.57
1880 8341 5.779771 TGGCCTTGAGTTAGGAATTTCAATT 59.220 36.000 3.32 0.00 37.50 2.32
1881 8342 6.071391 TGGCCTTGAGTTAGGAATTTCAATTC 60.071 38.462 3.32 3.97 43.12 2.17
1891 8352 4.870221 GAATTTCAATTCCCTGCAATGC 57.130 40.909 0.00 0.00 39.04 3.56
1892 8353 4.510571 GAATTTCAATTCCCTGCAATGCT 58.489 39.130 6.82 0.00 39.04 3.79
1893 8354 3.322211 TTTCAATTCCCTGCAATGCTG 57.678 42.857 6.82 5.88 0.00 4.41
1894 8355 1.927487 TCAATTCCCTGCAATGCTGT 58.073 45.000 6.82 0.00 0.00 4.40
1895 8356 2.250031 TCAATTCCCTGCAATGCTGTT 58.750 42.857 6.82 0.00 0.00 3.16
1896 8357 2.028839 TCAATTCCCTGCAATGCTGTTG 60.029 45.455 6.82 6.80 0.00 3.33
1897 8358 1.636148 ATTCCCTGCAATGCTGTTGT 58.364 45.000 6.82 0.00 0.00 3.32
1898 8359 1.412079 TTCCCTGCAATGCTGTTGTT 58.588 45.000 6.82 0.00 0.00 2.83
1899 8360 1.412079 TCCCTGCAATGCTGTTGTTT 58.588 45.000 6.82 0.00 0.00 2.83
1900 8361 1.761784 TCCCTGCAATGCTGTTGTTTT 59.238 42.857 6.82 0.00 0.00 2.43
1901 8362 1.868498 CCCTGCAATGCTGTTGTTTTG 59.132 47.619 6.82 0.00 0.00 2.44
1902 8363 1.262151 CCTGCAATGCTGTTGTTTTGC 59.738 47.619 6.82 0.00 43.60 3.68
1903 8364 0.928922 TGCAATGCTGTTGTTTTGCG 59.071 45.000 6.82 0.00 45.66 4.85
1904 8365 0.929615 GCAATGCTGTTGTTTTGCGT 59.070 45.000 0.00 0.00 35.62 5.24
1905 8366 2.123342 GCAATGCTGTTGTTTTGCGTA 58.877 42.857 0.00 0.00 35.62 4.42
1906 8367 2.730928 GCAATGCTGTTGTTTTGCGTAT 59.269 40.909 0.00 0.00 35.62 3.06
1907 8368 3.184178 GCAATGCTGTTGTTTTGCGTATT 59.816 39.130 0.00 0.00 35.62 1.89
1908 8369 4.690096 CAATGCTGTTGTTTTGCGTATTG 58.310 39.130 0.00 0.00 0.00 1.90
1909 8370 3.428746 TGCTGTTGTTTTGCGTATTGT 57.571 38.095 0.00 0.00 0.00 2.71
1910 8371 3.111838 TGCTGTTGTTTTGCGTATTGTG 58.888 40.909 0.00 0.00 0.00 3.33
1911 8372 3.112580 GCTGTTGTTTTGCGTATTGTGT 58.887 40.909 0.00 0.00 0.00 3.72
1912 8373 3.061271 GCTGTTGTTTTGCGTATTGTGTG 60.061 43.478 0.00 0.00 0.00 3.82
1913 8374 4.098055 TGTTGTTTTGCGTATTGTGTGT 57.902 36.364 0.00 0.00 0.00 3.72
1914 8375 3.854240 TGTTGTTTTGCGTATTGTGTGTG 59.146 39.130 0.00 0.00 0.00 3.82
1915 8376 3.071786 TGTTTTGCGTATTGTGTGTGG 57.928 42.857 0.00 0.00 0.00 4.17
1916 8377 2.423892 TGTTTTGCGTATTGTGTGTGGT 59.576 40.909 0.00 0.00 0.00 4.16
1917 8378 2.765108 TTTGCGTATTGTGTGTGGTG 57.235 45.000 0.00 0.00 0.00 4.17
1918 8379 0.947960 TTGCGTATTGTGTGTGGTGG 59.052 50.000 0.00 0.00 0.00 4.61
1919 8380 0.106894 TGCGTATTGTGTGTGGTGGA 59.893 50.000 0.00 0.00 0.00 4.02
1920 8381 0.796312 GCGTATTGTGTGTGGTGGAG 59.204 55.000 0.00 0.00 0.00 3.86
1921 8382 0.796312 CGTATTGTGTGTGGTGGAGC 59.204 55.000 0.00 0.00 0.00 4.70
1922 8383 1.608025 CGTATTGTGTGTGGTGGAGCT 60.608 52.381 0.00 0.00 0.00 4.09
1923 8384 2.076863 GTATTGTGTGTGGTGGAGCTC 58.923 52.381 4.71 4.71 0.00 4.09
1924 8385 0.473755 ATTGTGTGTGGTGGAGCTCA 59.526 50.000 17.19 0.00 0.00 4.26
1925 8386 0.463654 TTGTGTGTGGTGGAGCTCAC 60.464 55.000 17.19 11.54 45.34 3.51
1926 8387 1.956170 GTGTGTGGTGGAGCTCACG 60.956 63.158 17.19 0.00 46.96 4.35
1927 8388 3.044305 GTGTGGTGGAGCTCACGC 61.044 66.667 17.19 12.00 46.96 5.34
1936 8397 3.983494 AGCTCACGCTGTGCTCGT 61.983 61.111 8.19 0.00 42.81 4.18
1950 8411 3.586100 TGCTCGTGCATAGTGTTAGAA 57.414 42.857 8.30 0.00 45.31 2.10
1951 8412 3.920446 TGCTCGTGCATAGTGTTAGAAA 58.080 40.909 8.30 0.00 45.31 2.52
1952 8413 3.926527 TGCTCGTGCATAGTGTTAGAAAG 59.073 43.478 8.30 0.00 45.31 2.62
1953 8414 3.927142 GCTCGTGCATAGTGTTAGAAAGT 59.073 43.478 4.26 0.00 39.41 2.66
1954 8415 5.100259 GCTCGTGCATAGTGTTAGAAAGTA 58.900 41.667 4.26 0.00 39.41 2.24
1955 8416 5.749109 GCTCGTGCATAGTGTTAGAAAGTAT 59.251 40.000 4.26 0.00 39.41 2.12
1956 8417 6.916387 GCTCGTGCATAGTGTTAGAAAGTATA 59.084 38.462 4.26 0.00 39.41 1.47
1957 8418 7.595502 GCTCGTGCATAGTGTTAGAAAGTATAT 59.404 37.037 4.26 0.00 39.41 0.86
1958 8419 9.464714 CTCGTGCATAGTGTTAGAAAGTATATT 57.535 33.333 0.00 0.00 0.00 1.28
1959 8420 9.244799 TCGTGCATAGTGTTAGAAAGTATATTG 57.755 33.333 0.00 0.00 0.00 1.90
1960 8421 9.031360 CGTGCATAGTGTTAGAAAGTATATTGT 57.969 33.333 0.00 0.00 0.00 2.71
1967 8428 9.918630 AGTGTTAGAAAGTATATTGTAACGTGT 57.081 29.630 0.00 0.00 40.19 4.49
1968 8429 9.947897 GTGTTAGAAAGTATATTGTAACGTGTG 57.052 33.333 0.00 0.00 40.19 3.82
1969 8430 9.695526 TGTTAGAAAGTATATTGTAACGTGTGT 57.304 29.630 0.00 0.00 40.19 3.72
1986 8447 6.304788 CGTGTGTACGGTACAAGTATAAAC 57.695 41.667 21.61 8.19 46.23 2.01
1987 8448 6.086222 CGTGTGTACGGTACAAGTATAAACT 58.914 40.000 21.61 0.00 46.23 2.66
1988 8449 6.032775 CGTGTGTACGGTACAAGTATAAACTG 59.967 42.308 21.61 2.27 46.23 3.16
1989 8450 6.863126 GTGTGTACGGTACAAGTATAAACTGT 59.137 38.462 21.61 0.00 40.93 3.55
1990 8451 6.862608 TGTGTACGGTACAAGTATAAACTGTG 59.137 38.462 21.61 0.00 40.93 3.66
1991 8452 6.863126 GTGTACGGTACAAGTATAAACTGTGT 59.137 38.462 21.61 0.00 40.93 3.72
1992 8453 8.020819 GTGTACGGTACAAGTATAAACTGTGTA 58.979 37.037 21.61 0.00 40.93 2.90
1993 8454 8.020819 TGTACGGTACAAGTATAAACTGTGTAC 58.979 37.037 18.11 15.19 42.22 2.90
1994 8455 6.980593 ACGGTACAAGTATAAACTGTGTACA 58.019 36.000 20.05 0.00 43.23 2.90
1995 8456 7.605449 ACGGTACAAGTATAAACTGTGTACAT 58.395 34.615 20.05 12.07 43.23 2.29
1996 8457 7.543172 ACGGTACAAGTATAAACTGTGTACATG 59.457 37.037 20.05 16.51 43.23 3.21
1997 8458 7.463648 CGGTACAAGTATAAACTGTGTACATGC 60.464 40.741 20.05 0.00 43.23 4.06
1998 8459 6.403333 ACAAGTATAAACTGTGTACATGCG 57.597 37.500 0.00 0.00 35.62 4.73
1999 8460 5.929992 ACAAGTATAAACTGTGTACATGCGT 59.070 36.000 0.00 0.00 35.62 5.24
2000 8461 7.092079 ACAAGTATAAACTGTGTACATGCGTA 58.908 34.615 0.00 0.00 35.62 4.42
2001 8462 7.274904 ACAAGTATAAACTGTGTACATGCGTAG 59.725 37.037 0.00 0.00 35.62 3.51
2002 8463 7.092137 AGTATAAACTGTGTACATGCGTAGA 57.908 36.000 0.00 0.00 33.57 2.59
2003 8464 7.713750 AGTATAAACTGTGTACATGCGTAGAT 58.286 34.615 0.00 0.00 33.57 1.98
2004 8465 6.828502 ATAAACTGTGTACATGCGTAGATG 57.171 37.500 0.00 0.00 0.00 2.90
2005 8466 4.450082 AACTGTGTACATGCGTAGATGA 57.550 40.909 0.00 0.00 0.00 2.92
2006 8467 4.450082 ACTGTGTACATGCGTAGATGAA 57.550 40.909 0.00 0.00 0.00 2.57
2007 8468 4.424626 ACTGTGTACATGCGTAGATGAAG 58.575 43.478 0.00 0.00 0.00 3.02
2008 8469 4.082190 ACTGTGTACATGCGTAGATGAAGT 60.082 41.667 0.00 0.00 0.00 3.01
2009 8470 4.816392 TGTGTACATGCGTAGATGAAGTT 58.184 39.130 0.00 0.00 0.00 2.66
2010 8471 5.956642 TGTGTACATGCGTAGATGAAGTTA 58.043 37.500 0.00 0.00 0.00 2.24
2011 8472 6.033966 TGTGTACATGCGTAGATGAAGTTAG 58.966 40.000 0.00 0.00 0.00 2.34
2012 8473 5.041287 TGTACATGCGTAGATGAAGTTAGC 58.959 41.667 0.00 0.00 0.00 3.09
2013 8474 4.123497 ACATGCGTAGATGAAGTTAGCA 57.877 40.909 0.00 0.00 37.54 3.49
2014 8475 4.697514 ACATGCGTAGATGAAGTTAGCAT 58.302 39.130 0.00 0.00 43.52 3.79
2015 8476 5.118990 ACATGCGTAGATGAAGTTAGCATT 58.881 37.500 0.00 0.00 41.21 3.56
2016 8477 5.007039 ACATGCGTAGATGAAGTTAGCATTG 59.993 40.000 0.00 0.00 41.21 2.82
2017 8478 3.309682 TGCGTAGATGAAGTTAGCATTGC 59.690 43.478 0.00 0.00 0.00 3.56
2018 8479 3.602491 GCGTAGATGAAGTTAGCATTGCG 60.602 47.826 2.38 0.00 0.00 4.85
2019 8480 3.551890 CGTAGATGAAGTTAGCATTGCGT 59.448 43.478 2.38 0.00 0.00 5.24
2020 8481 4.548916 CGTAGATGAAGTTAGCATTGCGTG 60.549 45.833 2.38 0.00 0.00 5.34
2028 8489 3.735894 GCATTGCGTGCGTTGTAC 58.264 55.556 0.00 0.00 45.23 2.90
2029 8490 1.206578 GCATTGCGTGCGTTGTACT 59.793 52.632 0.00 0.00 45.23 2.73
2030 8491 0.789383 GCATTGCGTGCGTTGTACTC 60.789 55.000 0.00 0.00 45.23 2.59
2031 8492 0.790207 CATTGCGTGCGTTGTACTCT 59.210 50.000 0.00 0.00 0.00 3.24
2032 8493 1.989864 CATTGCGTGCGTTGTACTCTA 59.010 47.619 0.00 0.00 0.00 2.43
2033 8494 1.693467 TTGCGTGCGTTGTACTCTAG 58.307 50.000 0.00 0.00 0.00 2.43
2034 8495 0.109458 TGCGTGCGTTGTACTCTAGG 60.109 55.000 0.00 0.00 0.00 3.02
2035 8496 0.109412 GCGTGCGTTGTACTCTAGGT 60.109 55.000 0.00 0.00 0.00 3.08
2036 8497 1.614385 CGTGCGTTGTACTCTAGGTG 58.386 55.000 0.00 0.00 0.00 4.00
2037 8498 1.731424 CGTGCGTTGTACTCTAGGTGG 60.731 57.143 0.00 0.00 0.00 4.61
2038 8499 1.271656 GTGCGTTGTACTCTAGGTGGT 59.728 52.381 0.00 0.00 0.00 4.16
2039 8500 1.965643 TGCGTTGTACTCTAGGTGGTT 59.034 47.619 0.00 0.00 0.00 3.67
2040 8501 2.366266 TGCGTTGTACTCTAGGTGGTTT 59.634 45.455 0.00 0.00 0.00 3.27
2041 8502 3.573538 TGCGTTGTACTCTAGGTGGTTTA 59.426 43.478 0.00 0.00 0.00 2.01
2042 8503 4.171754 GCGTTGTACTCTAGGTGGTTTAG 58.828 47.826 0.00 0.00 0.00 1.85
2043 8504 4.741342 CGTTGTACTCTAGGTGGTTTAGG 58.259 47.826 0.00 0.00 0.00 2.69
2044 8505 4.219288 CGTTGTACTCTAGGTGGTTTAGGT 59.781 45.833 0.00 0.00 0.00 3.08
2045 8506 5.279156 CGTTGTACTCTAGGTGGTTTAGGTT 60.279 44.000 0.00 0.00 0.00 3.50
2046 8507 6.528321 GTTGTACTCTAGGTGGTTTAGGTTT 58.472 40.000 0.00 0.00 0.00 3.27
2047 8508 6.752285 TGTACTCTAGGTGGTTTAGGTTTT 57.248 37.500 0.00 0.00 0.00 2.43
2048 8509 6.527423 TGTACTCTAGGTGGTTTAGGTTTTG 58.473 40.000 0.00 0.00 0.00 2.44
2049 8510 5.641789 ACTCTAGGTGGTTTAGGTTTTGT 57.358 39.130 0.00 0.00 0.00 2.83
2050 8511 6.009908 ACTCTAGGTGGTTTAGGTTTTGTT 57.990 37.500 0.00 0.00 0.00 2.83
2051 8512 5.826208 ACTCTAGGTGGTTTAGGTTTTGTTG 59.174 40.000 0.00 0.00 0.00 3.33
2052 8513 6.003859 TCTAGGTGGTTTAGGTTTTGTTGA 57.996 37.500 0.00 0.00 0.00 3.18
2053 8514 6.059484 TCTAGGTGGTTTAGGTTTTGTTGAG 58.941 40.000 0.00 0.00 0.00 3.02
2054 8515 3.958147 AGGTGGTTTAGGTTTTGTTGAGG 59.042 43.478 0.00 0.00 0.00 3.86
2055 8516 3.702548 GGTGGTTTAGGTTTTGTTGAGGT 59.297 43.478 0.00 0.00 0.00 3.85
2056 8517 4.202080 GGTGGTTTAGGTTTTGTTGAGGTC 60.202 45.833 0.00 0.00 0.00 3.85
2057 8518 3.628487 TGGTTTAGGTTTTGTTGAGGTCG 59.372 43.478 0.00 0.00 0.00 4.79
2058 8519 3.878699 GGTTTAGGTTTTGTTGAGGTCGA 59.121 43.478 0.00 0.00 0.00 4.20
2059 8520 4.517832 GGTTTAGGTTTTGTTGAGGTCGAT 59.482 41.667 0.00 0.00 0.00 3.59
2060 8521 5.334646 GGTTTAGGTTTTGTTGAGGTCGATC 60.335 44.000 0.00 0.00 0.00 3.69
2061 8522 2.779506 AGGTTTTGTTGAGGTCGATCC 58.220 47.619 0.00 0.00 0.00 3.36
2077 8538 8.287439 AGGTCGATCCTTATCTGTATAGATTG 57.713 38.462 7.34 1.91 45.67 2.67
2078 8539 7.891183 AGGTCGATCCTTATCTGTATAGATTGT 59.109 37.037 7.34 0.00 45.67 2.71
2079 8540 8.524487 GGTCGATCCTTATCTGTATAGATTGTT 58.476 37.037 7.34 0.00 40.79 2.83
2082 8543 9.509855 CGATCCTTATCTGTATAGATTGTTAGC 57.490 37.037 7.34 0.00 40.79 3.09
2089 8550 7.898014 TCTGTATAGATTGTTAGCTTGAGGA 57.102 36.000 0.00 0.00 0.00 3.71
2090 8551 8.484214 TCTGTATAGATTGTTAGCTTGAGGAT 57.516 34.615 0.00 0.00 0.00 3.24
2091 8552 8.363390 TCTGTATAGATTGTTAGCTTGAGGATG 58.637 37.037 0.00 0.00 0.00 3.51
2092 8553 8.250143 TGTATAGATTGTTAGCTTGAGGATGA 57.750 34.615 0.00 0.00 0.00 2.92
2093 8554 8.704668 TGTATAGATTGTTAGCTTGAGGATGAA 58.295 33.333 0.00 0.00 0.00 2.57
2094 8555 9.717942 GTATAGATTGTTAGCTTGAGGATGAAT 57.282 33.333 0.00 0.00 0.00 2.57
2095 8556 8.845413 ATAGATTGTTAGCTTGAGGATGAATC 57.155 34.615 0.00 0.00 0.00 2.52
2096 8557 6.897986 AGATTGTTAGCTTGAGGATGAATCT 58.102 36.000 0.00 0.00 0.00 2.40
2097 8558 8.027524 AGATTGTTAGCTTGAGGATGAATCTA 57.972 34.615 0.00 0.00 0.00 1.98
2098 8559 8.149647 AGATTGTTAGCTTGAGGATGAATCTAG 58.850 37.037 0.00 0.00 0.00 2.43
2099 8560 6.798427 TGTTAGCTTGAGGATGAATCTAGT 57.202 37.500 0.00 0.00 0.00 2.57
2100 8561 7.898014 TGTTAGCTTGAGGATGAATCTAGTA 57.102 36.000 0.00 0.00 0.00 1.82
2101 8562 8.306313 TGTTAGCTTGAGGATGAATCTAGTAA 57.694 34.615 0.00 0.00 0.00 2.24
2102 8563 8.198109 TGTTAGCTTGAGGATGAATCTAGTAAC 58.802 37.037 0.00 0.00 0.00 2.50
2103 8564 6.798427 AGCTTGAGGATGAATCTAGTAACA 57.202 37.500 0.00 0.00 0.00 2.41
2104 8565 7.187824 AGCTTGAGGATGAATCTAGTAACAA 57.812 36.000 0.00 0.00 0.00 2.83
2105 8566 7.044798 AGCTTGAGGATGAATCTAGTAACAAC 58.955 38.462 0.00 0.00 0.00 3.32
2106 8567 6.258947 GCTTGAGGATGAATCTAGTAACAACC 59.741 42.308 0.00 0.00 0.00 3.77
2107 8568 7.496346 TTGAGGATGAATCTAGTAACAACCT 57.504 36.000 11.64 11.64 38.03 3.50
2108 8569 8.603898 TTGAGGATGAATCTAGTAACAACCTA 57.396 34.615 11.73 0.67 36.08 3.08
2109 8570 8.603898 TGAGGATGAATCTAGTAACAACCTAA 57.396 34.615 11.73 5.44 36.08 2.69
2110 8571 9.042450 TGAGGATGAATCTAGTAACAACCTAAA 57.958 33.333 11.73 4.86 36.08 1.85
2111 8572 9.315525 GAGGATGAATCTAGTAACAACCTAAAC 57.684 37.037 11.73 1.86 36.08 2.01
2112 8573 8.265764 AGGATGAATCTAGTAACAACCTAAACC 58.734 37.037 10.68 0.00 34.64 3.27
2113 8574 8.044908 GGATGAATCTAGTAACAACCTAAACCA 58.955 37.037 0.00 0.00 0.00 3.67
2114 8575 8.788325 ATGAATCTAGTAACAACCTAAACCAC 57.212 34.615 0.00 0.00 0.00 4.16
2115 8576 7.163441 TGAATCTAGTAACAACCTAAACCACC 58.837 38.462 0.00 0.00 0.00 4.61
2116 8577 6.947376 ATCTAGTAACAACCTAAACCACCT 57.053 37.500 0.00 0.00 0.00 4.00
2117 8578 8.439964 AATCTAGTAACAACCTAAACCACCTA 57.560 34.615 0.00 0.00 0.00 3.08
2118 8579 7.232118 TCTAGTAACAACCTAAACCACCTAC 57.768 40.000 0.00 0.00 0.00 3.18
2119 8580 5.233083 AGTAACAACCTAAACCACCTACC 57.767 43.478 0.00 0.00 0.00 3.18
2120 8581 2.845363 ACAACCTAAACCACCTACCG 57.155 50.000 0.00 0.00 0.00 4.02
2121 8582 2.049372 ACAACCTAAACCACCTACCGT 58.951 47.619 0.00 0.00 0.00 4.83
2122 8583 3.238597 ACAACCTAAACCACCTACCGTA 58.761 45.455 0.00 0.00 0.00 4.02
2123 8584 3.840078 ACAACCTAAACCACCTACCGTAT 59.160 43.478 0.00 0.00 0.00 3.06
2124 8585 5.022787 ACAACCTAAACCACCTACCGTATA 58.977 41.667 0.00 0.00 0.00 1.47
2125 8586 5.483583 ACAACCTAAACCACCTACCGTATAA 59.516 40.000 0.00 0.00 0.00 0.98
2126 8587 6.156775 ACAACCTAAACCACCTACCGTATAAT 59.843 38.462 0.00 0.00 0.00 1.28
2127 8588 6.410942 ACCTAAACCACCTACCGTATAATC 57.589 41.667 0.00 0.00 0.00 1.75
2128 8589 6.138967 ACCTAAACCACCTACCGTATAATCT 58.861 40.000 0.00 0.00 0.00 2.40
2129 8590 7.297614 ACCTAAACCACCTACCGTATAATCTA 58.702 38.462 0.00 0.00 0.00 1.98
2130 8591 7.952368 ACCTAAACCACCTACCGTATAATCTAT 59.048 37.037 0.00 0.00 0.00 1.98
2131 8592 9.466497 CCTAAACCACCTACCGTATAATCTATA 57.534 37.037 0.00 0.00 0.00 1.31
2133 8594 7.709149 AACCACCTACCGTATAATCTATACC 57.291 40.000 0.00 0.00 38.19 2.73
2134 8595 5.882557 ACCACCTACCGTATAATCTATACCG 59.117 44.000 0.00 0.00 38.19 4.02
2135 8596 5.220931 CCACCTACCGTATAATCTATACCGC 60.221 48.000 0.00 0.00 38.19 5.68
2136 8597 5.587844 CACCTACCGTATAATCTATACCGCT 59.412 44.000 0.00 0.00 38.19 5.52
2137 8598 6.763135 CACCTACCGTATAATCTATACCGCTA 59.237 42.308 0.00 0.00 38.19 4.26
2138 8599 7.443575 CACCTACCGTATAATCTATACCGCTAT 59.556 40.741 0.00 0.00 38.19 2.97
2139 8600 8.651389 ACCTACCGTATAATCTATACCGCTATA 58.349 37.037 0.00 0.00 38.19 1.31
2140 8601 9.664332 CCTACCGTATAATCTATACCGCTATAT 57.336 37.037 0.00 0.00 38.19 0.86
2150 8611 9.938280 AATCTATACCGCTATATAAACAAGCAA 57.062 29.630 0.00 0.00 35.98 3.91
2152 8613 9.366216 TCTATACCGCTATATAAACAAGCAATG 57.634 33.333 0.00 0.00 35.98 2.82
2153 8614 5.108385 ACCGCTATATAAACAAGCAATGC 57.892 39.130 0.00 0.00 35.98 3.56
2154 8615 4.151070 CCGCTATATAAACAAGCAATGCG 58.849 43.478 0.00 0.00 35.98 4.73
2155 8616 4.319477 CCGCTATATAAACAAGCAATGCGT 60.319 41.667 0.00 0.00 38.32 5.24
2156 8617 4.840772 CGCTATATAAACAAGCAATGCGTC 59.159 41.667 0.00 0.00 35.98 5.19
2157 8618 5.147162 GCTATATAAACAAGCAATGCGTCC 58.853 41.667 0.00 0.00 36.26 4.79
2158 8619 2.939460 ATAAACAAGCAATGCGTCCC 57.061 45.000 0.00 0.00 0.00 4.46
2159 8620 1.904287 TAAACAAGCAATGCGTCCCT 58.096 45.000 0.00 0.00 0.00 4.20
2160 8621 0.314935 AAACAAGCAATGCGTCCCTG 59.685 50.000 0.00 0.00 0.00 4.45
2161 8622 2.146073 AACAAGCAATGCGTCCCTGC 62.146 55.000 0.00 0.00 36.29 4.85
2163 8624 1.026182 CAAGCAATGCGTCCCTGCTA 61.026 55.000 4.07 0.00 45.50 3.49
2164 8625 0.322456 AAGCAATGCGTCCCTGCTAA 60.322 50.000 4.07 0.00 45.50 3.09
2165 8626 1.026718 AGCAATGCGTCCCTGCTAAC 61.027 55.000 1.68 0.00 44.44 2.34
2166 8627 1.715585 CAATGCGTCCCTGCTAACG 59.284 57.895 0.00 0.00 41.68 3.18
2171 8632 2.589890 CGTCCCTGCTAACGCATAC 58.410 57.895 0.00 0.00 46.74 2.39
2172 8633 1.206745 CGTCCCTGCTAACGCATACG 61.207 60.000 0.00 0.00 46.74 3.06
2173 8634 1.227147 TCCCTGCTAACGCATACGC 60.227 57.895 0.00 0.00 46.74 4.42
2174 8635 1.227263 CCCTGCTAACGCATACGCT 60.227 57.895 0.00 0.00 46.74 5.07
2175 8636 0.810031 CCCTGCTAACGCATACGCTT 60.810 55.000 0.00 0.00 46.74 4.68
2176 8637 0.577269 CCTGCTAACGCATACGCTTC 59.423 55.000 0.00 0.00 46.74 3.86
2177 8638 1.277326 CTGCTAACGCATACGCTTCA 58.723 50.000 0.00 0.00 46.74 3.02
2178 8639 1.658596 CTGCTAACGCATACGCTTCAA 59.341 47.619 0.00 0.00 46.74 2.69
2179 8640 1.392168 TGCTAACGCATACGCTTCAAC 59.608 47.619 0.00 0.00 45.53 3.18
2180 8641 1.267383 GCTAACGCATACGCTTCAACC 60.267 52.381 0.00 0.00 45.53 3.77
2181 8642 1.996898 CTAACGCATACGCTTCAACCA 59.003 47.619 0.00 0.00 45.53 3.67
2182 8643 0.515564 AACGCATACGCTTCAACCAC 59.484 50.000 0.00 0.00 45.53 4.16
2183 8644 0.320421 ACGCATACGCTTCAACCACT 60.320 50.000 0.00 0.00 45.53 4.00
2184 8645 0.796312 CGCATACGCTTCAACCACTT 59.204 50.000 0.00 0.00 35.30 3.16
2185 8646 1.196808 CGCATACGCTTCAACCACTTT 59.803 47.619 0.00 0.00 35.30 2.66
2186 8647 2.350388 CGCATACGCTTCAACCACTTTT 60.350 45.455 0.00 0.00 35.30 2.27
2187 8648 3.120477 CGCATACGCTTCAACCACTTTTA 60.120 43.478 0.00 0.00 35.30 1.52
2188 8649 4.156182 GCATACGCTTCAACCACTTTTAC 58.844 43.478 0.00 0.00 34.30 2.01
2189 8650 4.319911 GCATACGCTTCAACCACTTTTACA 60.320 41.667 0.00 0.00 34.30 2.41
2190 8651 5.619086 GCATACGCTTCAACCACTTTTACAT 60.619 40.000 0.00 0.00 34.30 2.29
2191 8652 4.223320 ACGCTTCAACCACTTTTACATG 57.777 40.909 0.00 0.00 0.00 3.21
2192 8653 3.004315 ACGCTTCAACCACTTTTACATGG 59.996 43.478 0.00 0.00 42.13 3.66
2202 8663 6.124088 CCACTTTTACATGGTATTCAGAGC 57.876 41.667 0.00 0.00 0.00 4.09
2203 8664 5.066505 CCACTTTTACATGGTATTCAGAGCC 59.933 44.000 0.00 0.00 0.00 4.70
2204 8665 5.882557 CACTTTTACATGGTATTCAGAGCCT 59.117 40.000 0.00 0.00 0.00 4.58
2205 8666 7.047891 CACTTTTACATGGTATTCAGAGCCTA 58.952 38.462 0.00 0.00 0.00 3.93
2206 8667 7.552687 CACTTTTACATGGTATTCAGAGCCTAA 59.447 37.037 0.00 0.00 0.00 2.69
2207 8668 8.107095 ACTTTTACATGGTATTCAGAGCCTAAA 58.893 33.333 0.00 0.00 0.00 1.85
2208 8669 7.859325 TTTACATGGTATTCAGAGCCTAAAC 57.141 36.000 0.00 0.00 0.00 2.01
2209 8670 5.700402 ACATGGTATTCAGAGCCTAAACT 57.300 39.130 0.00 0.00 0.00 2.66
2210 8671 5.675538 ACATGGTATTCAGAGCCTAAACTC 58.324 41.667 0.00 0.00 36.91 3.01
2212 8673 6.611642 ACATGGTATTCAGAGCCTAAACTCTA 59.388 38.462 0.00 0.00 45.33 2.43
2213 8674 6.716934 TGGTATTCAGAGCCTAAACTCTAG 57.283 41.667 0.00 0.00 45.33 2.43
2214 8675 5.069251 TGGTATTCAGAGCCTAAACTCTAGC 59.931 44.000 0.00 0.00 45.33 3.42
2215 8676 5.069251 GGTATTCAGAGCCTAAACTCTAGCA 59.931 44.000 0.00 0.00 45.33 3.49
2216 8677 4.457834 TTCAGAGCCTAAACTCTAGCAC 57.542 45.455 0.00 0.00 45.33 4.40
2217 8678 3.431415 TCAGAGCCTAAACTCTAGCACA 58.569 45.455 0.00 0.00 45.33 4.57
2218 8679 4.026744 TCAGAGCCTAAACTCTAGCACAT 58.973 43.478 0.00 0.00 45.33 3.21
2219 8680 4.098654 TCAGAGCCTAAACTCTAGCACATC 59.901 45.833 0.00 0.00 45.33 3.06
2220 8681 4.099266 CAGAGCCTAAACTCTAGCACATCT 59.901 45.833 0.00 0.00 45.33 2.90
2221 8682 5.300539 CAGAGCCTAAACTCTAGCACATCTA 59.699 44.000 0.00 0.00 45.33 1.98
2222 8683 5.894393 AGAGCCTAAACTCTAGCACATCTAA 59.106 40.000 0.00 0.00 45.25 2.10
2223 8684 6.381420 AGAGCCTAAACTCTAGCACATCTAAA 59.619 38.462 0.00 0.00 45.25 1.85
2224 8685 6.947464 AGCCTAAACTCTAGCACATCTAAAA 58.053 36.000 0.00 0.00 0.00 1.52
2225 8686 6.819146 AGCCTAAACTCTAGCACATCTAAAAC 59.181 38.462 0.00 0.00 0.00 2.43
2226 8687 6.037281 GCCTAAACTCTAGCACATCTAAAACC 59.963 42.308 0.00 0.00 0.00 3.27
2227 8688 6.539103 CCTAAACTCTAGCACATCTAAAACCC 59.461 42.308 0.00 0.00 0.00 4.11
2228 8689 5.499004 AACTCTAGCACATCTAAAACCCA 57.501 39.130 0.00 0.00 0.00 4.51
2229 8690 5.700402 ACTCTAGCACATCTAAAACCCAT 57.300 39.130 0.00 0.00 0.00 4.00
2230 8691 5.675538 ACTCTAGCACATCTAAAACCCATC 58.324 41.667 0.00 0.00 0.00 3.51
2231 8692 5.189736 ACTCTAGCACATCTAAAACCCATCA 59.810 40.000 0.00 0.00 0.00 3.07
2232 8693 5.428253 TCTAGCACATCTAAAACCCATCAC 58.572 41.667 0.00 0.00 0.00 3.06
2233 8694 3.356290 AGCACATCTAAAACCCATCACC 58.644 45.455 0.00 0.00 0.00 4.02
2234 8695 3.088532 GCACATCTAAAACCCATCACCA 58.911 45.455 0.00 0.00 0.00 4.17
2235 8696 3.701040 GCACATCTAAAACCCATCACCAT 59.299 43.478 0.00 0.00 0.00 3.55
2236 8697 4.440525 GCACATCTAAAACCCATCACCATG 60.441 45.833 0.00 0.00 0.00 3.66
2244 8705 3.286404 CCATCACCATGGCCTCAAA 57.714 52.632 13.04 0.00 43.55 2.69
2245 8706 0.819582 CCATCACCATGGCCTCAAAC 59.180 55.000 13.04 0.00 43.55 2.93
2246 8707 1.617804 CCATCACCATGGCCTCAAACT 60.618 52.381 13.04 0.00 43.55 2.66
2247 8708 1.747355 CATCACCATGGCCTCAAACTC 59.253 52.381 13.04 0.00 0.00 3.01
2248 8709 0.038166 TCACCATGGCCTCAAACTCC 59.962 55.000 13.04 0.00 0.00 3.85
2249 8710 1.002134 ACCATGGCCTCAAACTCCG 60.002 57.895 13.04 0.00 0.00 4.63
2250 8711 2.409870 CCATGGCCTCAAACTCCGC 61.410 63.158 3.32 0.00 0.00 5.54
2251 8712 2.044946 ATGGCCTCAAACTCCGCC 60.045 61.111 3.32 0.00 41.99 6.13
2253 8714 3.056328 GGCCTCAAACTCCGCCAC 61.056 66.667 0.00 0.00 41.25 5.01
2254 8715 3.056328 GCCTCAAACTCCGCCACC 61.056 66.667 0.00 0.00 0.00 4.61
2255 8716 2.742372 CCTCAAACTCCGCCACCG 60.742 66.667 0.00 0.00 0.00 4.94
2256 8717 3.423154 CTCAAACTCCGCCACCGC 61.423 66.667 0.00 0.00 0.00 5.68
2279 8740 2.825836 CCGCACCAGCCCTCATTC 60.826 66.667 0.00 0.00 37.52 2.67
2280 8741 2.825836 CGCACCAGCCCTCATTCC 60.826 66.667 0.00 0.00 37.52 3.01
2281 8742 2.440980 GCACCAGCCCTCATTCCC 60.441 66.667 0.00 0.00 33.58 3.97
2282 8743 3.089838 CACCAGCCCTCATTCCCA 58.910 61.111 0.00 0.00 0.00 4.37
2283 8744 1.616921 CACCAGCCCTCATTCCCAT 59.383 57.895 0.00 0.00 0.00 4.00
2284 8745 0.466922 CACCAGCCCTCATTCCCATC 60.467 60.000 0.00 0.00 0.00 3.51
2285 8746 1.228063 CCAGCCCTCATTCCCATCG 60.228 63.158 0.00 0.00 0.00 3.84
2286 8747 1.895707 CAGCCCTCATTCCCATCGC 60.896 63.158 0.00 0.00 0.00 4.58
2287 8748 2.595754 GCCCTCATTCCCATCGCC 60.596 66.667 0.00 0.00 0.00 5.54
2288 8749 2.281070 CCCTCATTCCCATCGCCG 60.281 66.667 0.00 0.00 0.00 6.46
2289 8750 2.807107 CCCTCATTCCCATCGCCGA 61.807 63.158 0.00 0.00 0.00 5.54
2290 8751 1.372683 CCTCATTCCCATCGCCGAT 59.627 57.895 0.00 0.00 0.00 4.18
2291 8752 0.671781 CCTCATTCCCATCGCCGATC 60.672 60.000 0.00 0.00 0.00 3.69
2292 8753 1.006220 TCATTCCCATCGCCGATCG 60.006 57.895 8.51 8.51 40.15 3.69
2293 8754 2.357517 ATTCCCATCGCCGATCGC 60.358 61.111 10.32 4.45 38.27 4.58
2294 8755 3.883744 ATTCCCATCGCCGATCGCC 62.884 63.158 10.32 0.00 38.27 5.54
2298 8759 4.284860 CATCGCCGATCGCCTCCA 62.285 66.667 10.32 0.00 38.27 3.86
2299 8760 3.306311 ATCGCCGATCGCCTCCAT 61.306 61.111 10.32 0.00 38.27 3.41
2300 8761 3.288308 ATCGCCGATCGCCTCCATC 62.288 63.158 10.32 0.00 38.27 3.51
2303 8764 3.983494 CCGATCGCCTCCATCGCT 61.983 66.667 10.32 0.00 41.55 4.93
2304 8765 2.626780 CCGATCGCCTCCATCGCTA 61.627 63.158 10.32 0.00 41.55 4.26
2305 8766 1.442857 CGATCGCCTCCATCGCTAC 60.443 63.158 0.26 0.00 36.98 3.58
2306 8767 1.660355 GATCGCCTCCATCGCTACA 59.340 57.895 0.00 0.00 0.00 2.74
2307 8768 0.032130 GATCGCCTCCATCGCTACAA 59.968 55.000 0.00 0.00 0.00 2.41
2308 8769 0.249489 ATCGCCTCCATCGCTACAAC 60.249 55.000 0.00 0.00 0.00 3.32
2309 8770 1.141881 CGCCTCCATCGCTACAACT 59.858 57.895 0.00 0.00 0.00 3.16
2310 8771 0.460284 CGCCTCCATCGCTACAACTT 60.460 55.000 0.00 0.00 0.00 2.66
2311 8772 1.291132 GCCTCCATCGCTACAACTTC 58.709 55.000 0.00 0.00 0.00 3.01
2312 8773 1.941325 CCTCCATCGCTACAACTTCC 58.059 55.000 0.00 0.00 0.00 3.46
2313 8774 1.482593 CCTCCATCGCTACAACTTCCT 59.517 52.381 0.00 0.00 0.00 3.36
2314 8775 2.544685 CTCCATCGCTACAACTTCCTG 58.455 52.381 0.00 0.00 0.00 3.86
2315 8776 1.207089 TCCATCGCTACAACTTCCTGG 59.793 52.381 0.00 0.00 0.00 4.45
2316 8777 1.066143 CCATCGCTACAACTTCCTGGT 60.066 52.381 0.00 0.00 0.00 4.00
2317 8778 2.002586 CATCGCTACAACTTCCTGGTG 58.997 52.381 0.00 0.00 39.79 4.17
2321 8782 4.579127 ACAACTTCCTGGTGTGGC 57.421 55.556 0.00 0.00 46.28 5.01
2322 8783 1.612513 ACAACTTCCTGGTGTGGCA 59.387 52.632 0.00 0.00 46.28 4.92
2323 8784 0.185901 ACAACTTCCTGGTGTGGCAT 59.814 50.000 0.00 0.00 46.28 4.40
2324 8785 0.599558 CAACTTCCTGGTGTGGCATG 59.400 55.000 0.00 0.00 0.00 4.06
2325 8786 1.181098 AACTTCCTGGTGTGGCATGC 61.181 55.000 9.90 9.90 0.00 4.06
2326 8787 2.283101 TTCCTGGTGTGGCATGCC 60.283 61.111 30.54 30.54 0.00 4.40
2327 8788 3.884704 TTCCTGGTGTGGCATGCCC 62.885 63.158 33.44 23.83 34.56 5.36
2328 8789 4.682334 CCTGGTGTGGCATGCCCA 62.682 66.667 33.44 26.07 42.79 5.36
2335 8796 4.992740 TGGCATGCCCAAGCGGTT 62.993 61.111 33.44 0.00 41.82 4.44
2336 8797 4.440127 GGCATGCCCAAGCGGTTG 62.440 66.667 27.24 20.18 44.31 3.77
2347 8808 2.126346 GCGGTTGCTGCCATCAAC 60.126 61.111 2.85 2.85 42.13 3.18
2348 8809 2.629656 GCGGTTGCTGCCATCAACT 61.630 57.895 10.85 0.00 42.40 3.16
2349 8810 1.210931 CGGTTGCTGCCATCAACTG 59.789 57.895 10.85 8.43 42.40 3.16
2350 8811 1.080298 GGTTGCTGCCATCAACTGC 60.080 57.895 10.85 0.00 42.40 4.40
2351 8812 1.443194 GTTGCTGCCATCAACTGCG 60.443 57.895 4.23 0.00 40.31 5.18
2352 8813 3.271706 TTGCTGCCATCAACTGCGC 62.272 57.895 0.00 0.00 35.00 6.09
2353 8814 4.487412 GCTGCCATCAACTGCGCC 62.487 66.667 4.18 0.00 0.00 6.53
2354 8815 3.818787 CTGCCATCAACTGCGCCC 61.819 66.667 4.18 0.00 0.00 6.13
2355 8816 4.657408 TGCCATCAACTGCGCCCA 62.657 61.111 4.18 0.00 0.00 5.36
2356 8817 3.372730 GCCATCAACTGCGCCCAA 61.373 61.111 4.18 0.00 0.00 4.12
2357 8818 2.568090 CCATCAACTGCGCCCAAC 59.432 61.111 4.18 0.00 0.00 3.77
2358 8819 1.973281 CCATCAACTGCGCCCAACT 60.973 57.895 4.18 0.00 0.00 3.16
2359 8820 1.503542 CATCAACTGCGCCCAACTC 59.496 57.895 4.18 0.00 0.00 3.01
2360 8821 1.073025 ATCAACTGCGCCCAACTCA 59.927 52.632 4.18 0.00 0.00 3.41
2361 8822 0.322816 ATCAACTGCGCCCAACTCAT 60.323 50.000 4.18 0.00 0.00 2.90
2362 8823 0.955428 TCAACTGCGCCCAACTCATC 60.955 55.000 4.18 0.00 0.00 2.92
2363 8824 0.957395 CAACTGCGCCCAACTCATCT 60.957 55.000 4.18 0.00 0.00 2.90
2364 8825 0.674895 AACTGCGCCCAACTCATCTC 60.675 55.000 4.18 0.00 0.00 2.75
2365 8826 1.817099 CTGCGCCCAACTCATCTCC 60.817 63.158 4.18 0.00 0.00 3.71
2366 8827 2.249413 CTGCGCCCAACTCATCTCCT 62.249 60.000 4.18 0.00 0.00 3.69
2367 8828 1.078143 GCGCCCAACTCATCTCCTT 60.078 57.895 0.00 0.00 0.00 3.36
2368 8829 1.092345 GCGCCCAACTCATCTCCTTC 61.092 60.000 0.00 0.00 0.00 3.46
2369 8830 0.250234 CGCCCAACTCATCTCCTTCA 59.750 55.000 0.00 0.00 0.00 3.02
2370 8831 1.134280 CGCCCAACTCATCTCCTTCAT 60.134 52.381 0.00 0.00 0.00 2.57
2371 8832 2.570135 GCCCAACTCATCTCCTTCATC 58.430 52.381 0.00 0.00 0.00 2.92
2372 8833 2.092753 GCCCAACTCATCTCCTTCATCA 60.093 50.000 0.00 0.00 0.00 3.07
2373 8834 3.623203 GCCCAACTCATCTCCTTCATCAA 60.623 47.826 0.00 0.00 0.00 2.57
2374 8835 4.789807 CCCAACTCATCTCCTTCATCAAT 58.210 43.478 0.00 0.00 0.00 2.57
2375 8836 4.820716 CCCAACTCATCTCCTTCATCAATC 59.179 45.833 0.00 0.00 0.00 2.67
2376 8837 4.820716 CCAACTCATCTCCTTCATCAATCC 59.179 45.833 0.00 0.00 0.00 3.01
2377 8838 5.434408 CAACTCATCTCCTTCATCAATCCA 58.566 41.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.299926 AGACGCACGAACCTGTCAC 60.300 57.895 0.00 0.00 33.83 3.67
71 72 1.148273 TGAACAGTGTGGAGGTGGC 59.852 57.895 0.00 0.00 0.00 5.01
79 80 1.019673 AGCAGCTTGTGAACAGTGTG 58.980 50.000 0.00 0.00 0.00 3.82
187 188 5.299279 TGCCCACTTTGAGAAAAGAAAGTAG 59.701 40.000 5.27 0.00 39.79 2.57
308 322 4.622220 CGTATTAGGGCCCATAATTAGCGT 60.622 45.833 27.56 0.25 0.00 5.07
351 365 0.107831 TACATCATTAGGCGGCCACC 59.892 55.000 23.09 0.00 0.00 4.61
435 450 5.164080 CGAAAGATCGGACTAAATATTCGCC 60.164 44.000 0.00 0.00 45.32 5.54
655 705 3.334691 ACGACAGGAACCATGTTATGTG 58.665 45.455 0.00 0.00 0.00 3.21
769 819 1.442769 GATGGAGCGCTTCTGTTTCA 58.557 50.000 18.47 0.00 0.00 2.69
775 825 1.680522 ATGGACGATGGAGCGCTTCT 61.681 55.000 18.47 1.83 33.86 2.85
862 7108 1.919956 GACCCGCGACGAGAGAAGAA 61.920 60.000 8.23 0.00 0.00 2.52
901 7187 5.746990 AACTGGAGTCTGGGTATATATGC 57.253 43.478 0.00 0.00 0.00 3.14
917 7229 1.679139 CTGTGCTGAACCAAACTGGA 58.321 50.000 0.00 0.00 40.96 3.86
980 7297 0.160182 CGTGTTTTCGTGCTACGTCC 59.840 55.000 0.00 0.00 43.14 4.79
1109 7475 3.535629 CTGCAGAAGGGCGTGTCCA 62.536 63.158 8.42 0.00 36.21 4.02
1277 7661 1.080772 CTCAAGCACGTACGGAGCA 60.081 57.895 28.42 13.18 0.00 4.26
1289 7673 0.449388 CCGATCTTGTTGGCTCAAGC 59.551 55.000 14.68 0.00 42.90 4.01
1360 7747 1.416401 TCTTCAACCAAGGCGAGTCTT 59.584 47.619 0.00 0.00 32.22 3.01
1392 7784 1.472552 CCGTGAACAACTCCAGTGACA 60.473 52.381 0.00 0.00 0.00 3.58
1398 7790 1.227823 CCTGCCGTGAACAACTCCA 60.228 57.895 0.00 0.00 0.00 3.86
1433 7838 0.476771 ACCCAAATCACTTGACCGGT 59.523 50.000 6.92 6.92 37.17 5.28
1452 7857 2.546778 CTCCTTTCCGCTGCGTTTATA 58.453 47.619 21.59 0.86 0.00 0.98
1553 7980 3.189287 AGAACTGACATCAATGCCGAAAC 59.811 43.478 0.00 0.00 0.00 2.78
1558 7985 4.877823 TCATACAGAACTGACATCAATGCC 59.122 41.667 8.87 0.00 0.00 4.40
1559 7986 5.814188 TCTCATACAGAACTGACATCAATGC 59.186 40.000 8.87 0.00 0.00 3.56
1560 7987 6.018913 GCTCTCATACAGAACTGACATCAATG 60.019 42.308 8.87 3.34 0.00 2.82
1561 7988 6.047870 GCTCTCATACAGAACTGACATCAAT 58.952 40.000 8.87 0.00 0.00 2.57
1562 7989 5.414360 GCTCTCATACAGAACTGACATCAA 58.586 41.667 8.87 0.00 0.00 2.57
1740 8199 2.818751 TCAGTTTTTGACACCCCAGT 57.181 45.000 0.00 0.00 0.00 4.00
1790 8249 5.104693 TGGAGACTGTCTTAGTTTTTGTCCA 60.105 40.000 12.27 7.77 40.53 4.02
1791 8250 5.365619 TGGAGACTGTCTTAGTTTTTGTCC 58.634 41.667 12.27 5.22 40.53 4.02
1813 8273 4.627035 TGTCTTGTTGATGCTTAGTCGATG 59.373 41.667 0.00 0.00 0.00 3.84
1814 8274 4.820897 TGTCTTGTTGATGCTTAGTCGAT 58.179 39.130 0.00 0.00 0.00 3.59
1829 8290 2.963782 AGGACCGTAAGAGTTGTCTTGT 59.036 45.455 0.00 0.00 43.29 3.16
1841 8302 1.980036 AGGCCAAAAGTAGGACCGTAA 59.020 47.619 5.01 0.00 33.32 3.18
1845 8306 2.224793 ACTCAAGGCCAAAAGTAGGACC 60.225 50.000 5.01 0.00 33.32 4.46
1848 8309 4.010349 CCTAACTCAAGGCCAAAAGTAGG 58.990 47.826 5.01 4.74 0.00 3.18
1852 8313 5.728637 AATTCCTAACTCAAGGCCAAAAG 57.271 39.130 5.01 0.32 36.51 2.27
1870 8331 4.331717 CAGCATTGCAGGGAATTGAAATTC 59.668 41.667 11.91 7.15 43.12 2.17
1879 8340 1.412079 AACAACAGCATTGCAGGGAA 58.588 45.000 11.91 0.00 0.00 3.97
1880 8341 1.412079 AAACAACAGCATTGCAGGGA 58.588 45.000 11.91 0.00 0.00 4.20
1881 8342 1.868498 CAAAACAACAGCATTGCAGGG 59.132 47.619 11.91 2.48 0.00 4.45
1882 8343 1.262151 GCAAAACAACAGCATTGCAGG 59.738 47.619 11.91 5.10 45.61 4.85
1883 8344 1.071107 CGCAAAACAACAGCATTGCAG 60.071 47.619 11.91 5.33 46.40 4.41
1884 8345 0.928922 CGCAAAACAACAGCATTGCA 59.071 45.000 11.91 0.00 46.40 4.08
1885 8346 0.929615 ACGCAAAACAACAGCATTGC 59.070 45.000 0.00 0.00 43.51 3.56
1886 8347 4.208873 ACAATACGCAAAACAACAGCATTG 59.791 37.500 0.00 0.00 31.71 2.82
1887 8348 4.208873 CACAATACGCAAAACAACAGCATT 59.791 37.500 0.00 0.00 0.00 3.56
1888 8349 3.735240 CACAATACGCAAAACAACAGCAT 59.265 39.130 0.00 0.00 0.00 3.79
1889 8350 3.111838 CACAATACGCAAAACAACAGCA 58.888 40.909 0.00 0.00 0.00 4.41
1890 8351 3.061271 CACACAATACGCAAAACAACAGC 60.061 43.478 0.00 0.00 0.00 4.40
1891 8352 4.027783 CACACACAATACGCAAAACAACAG 60.028 41.667 0.00 0.00 0.00 3.16
1892 8353 3.854240 CACACACAATACGCAAAACAACA 59.146 39.130 0.00 0.00 0.00 3.33
1893 8354 3.241784 CCACACACAATACGCAAAACAAC 59.758 43.478 0.00 0.00 0.00 3.32
1894 8355 3.119459 ACCACACACAATACGCAAAACAA 60.119 39.130 0.00 0.00 0.00 2.83
1895 8356 2.423892 ACCACACACAATACGCAAAACA 59.576 40.909 0.00 0.00 0.00 2.83
1896 8357 2.786578 CACCACACACAATACGCAAAAC 59.213 45.455 0.00 0.00 0.00 2.43
1897 8358 2.223595 CCACCACACACAATACGCAAAA 60.224 45.455 0.00 0.00 0.00 2.44
1898 8359 1.335182 CCACCACACACAATACGCAAA 59.665 47.619 0.00 0.00 0.00 3.68
1899 8360 0.947960 CCACCACACACAATACGCAA 59.052 50.000 0.00 0.00 0.00 4.85
1900 8361 0.106894 TCCACCACACACAATACGCA 59.893 50.000 0.00 0.00 0.00 5.24
1901 8362 0.796312 CTCCACCACACACAATACGC 59.204 55.000 0.00 0.00 0.00 4.42
1902 8363 0.796312 GCTCCACCACACACAATACG 59.204 55.000 0.00 0.00 0.00 3.06
1903 8364 2.076863 GAGCTCCACCACACACAATAC 58.923 52.381 0.87 0.00 0.00 1.89
1904 8365 1.696884 TGAGCTCCACCACACACAATA 59.303 47.619 12.15 0.00 0.00 1.90
1905 8366 0.473755 TGAGCTCCACCACACACAAT 59.526 50.000 12.15 0.00 0.00 2.71
1906 8367 0.463654 GTGAGCTCCACCACACACAA 60.464 55.000 12.15 0.00 39.86 3.33
1907 8368 1.146041 GTGAGCTCCACCACACACA 59.854 57.895 12.15 0.00 39.86 3.72
1908 8369 1.956170 CGTGAGCTCCACCACACAC 60.956 63.158 12.15 0.00 42.76 3.82
1909 8370 2.421314 CGTGAGCTCCACCACACA 59.579 61.111 12.15 0.00 42.76 3.72
1931 8392 3.927142 ACTTTCTAACACTATGCACGAGC 59.073 43.478 0.00 0.00 42.57 5.03
1932 8393 9.464714 AATATACTTTCTAACACTATGCACGAG 57.535 33.333 0.00 0.00 0.00 4.18
1933 8394 9.244799 CAATATACTTTCTAACACTATGCACGA 57.755 33.333 0.00 0.00 0.00 4.35
1934 8395 9.031360 ACAATATACTTTCTAACACTATGCACG 57.969 33.333 0.00 0.00 0.00 5.34
1941 8402 9.918630 ACACGTTACAATATACTTTCTAACACT 57.081 29.630 0.00 0.00 0.00 3.55
1942 8403 9.947897 CACACGTTACAATATACTTTCTAACAC 57.052 33.333 0.00 0.00 0.00 3.32
1943 8404 9.695526 ACACACGTTACAATATACTTTCTAACA 57.304 29.630 0.00 0.00 0.00 2.41
1946 8407 9.489393 CGTACACACGTTACAATATACTTTCTA 57.511 33.333 0.00 0.00 43.31 2.10
1947 8408 7.485913 CCGTACACACGTTACAATATACTTTCT 59.514 37.037 0.00 0.00 46.96 2.52
1948 8409 7.273381 ACCGTACACACGTTACAATATACTTTC 59.727 37.037 0.00 0.00 46.96 2.62
1949 8410 7.090173 ACCGTACACACGTTACAATATACTTT 58.910 34.615 0.00 0.00 46.96 2.66
1950 8411 6.620678 ACCGTACACACGTTACAATATACTT 58.379 36.000 0.00 0.00 46.96 2.24
1951 8412 6.194796 ACCGTACACACGTTACAATATACT 57.805 37.500 0.00 0.00 46.96 2.12
1952 8413 7.363589 GTACCGTACACACGTTACAATATAC 57.636 40.000 3.69 0.00 46.96 1.47
1959 8420 3.628017 ACTTGTACCGTACACACGTTAC 58.372 45.455 11.00 0.00 46.96 2.50
1960 8421 3.980646 ACTTGTACCGTACACACGTTA 57.019 42.857 11.00 0.00 46.96 3.18
1961 8422 2.869233 ACTTGTACCGTACACACGTT 57.131 45.000 11.00 0.00 46.96 3.99
1962 8423 5.621197 TTATACTTGTACCGTACACACGT 57.379 39.130 11.00 10.72 46.96 4.49
1963 8424 6.032775 CAGTTTATACTTGTACCGTACACACG 59.967 42.308 11.00 5.73 39.21 4.49
1964 8425 6.863126 ACAGTTTATACTTGTACCGTACACAC 59.137 38.462 11.00 0.98 38.63 3.82
1965 8426 6.862608 CACAGTTTATACTTGTACCGTACACA 59.137 38.462 11.00 0.62 38.63 3.72
1966 8427 6.863126 ACACAGTTTATACTTGTACCGTACAC 59.137 38.462 11.00 0.00 38.63 2.90
1967 8428 6.980593 ACACAGTTTATACTTGTACCGTACA 58.019 36.000 7.32 7.32 36.79 2.90
1968 8429 8.020819 TGTACACAGTTTATACTTGTACCGTAC 58.979 37.037 21.35 1.40 41.65 3.67
1969 8430 8.105097 TGTACACAGTTTATACTTGTACCGTA 57.895 34.615 21.35 10.88 41.65 4.02
1970 8431 6.980593 TGTACACAGTTTATACTTGTACCGT 58.019 36.000 21.35 0.00 41.65 4.83
1971 8432 7.463648 GCATGTACACAGTTTATACTTGTACCG 60.464 40.741 21.35 17.13 41.65 4.02
1972 8433 7.463648 CGCATGTACACAGTTTATACTTGTACC 60.464 40.741 21.35 13.18 41.65 3.34
1973 8434 7.062605 ACGCATGTACACAGTTTATACTTGTAC 59.937 37.037 19.53 19.53 42.05 2.90
1974 8435 7.092079 ACGCATGTACACAGTTTATACTTGTA 58.908 34.615 0.00 5.13 32.10 2.41
1975 8436 5.929992 ACGCATGTACACAGTTTATACTTGT 59.070 36.000 0.00 6.46 33.37 3.16
1976 8437 6.403333 ACGCATGTACACAGTTTATACTTG 57.597 37.500 0.00 0.00 30.26 3.16
1977 8438 7.541162 TCTACGCATGTACACAGTTTATACTT 58.459 34.615 0.00 0.00 30.26 2.24
1978 8439 7.092137 TCTACGCATGTACACAGTTTATACT 57.908 36.000 0.00 0.00 34.00 2.12
1979 8440 7.646526 TCATCTACGCATGTACACAGTTTATAC 59.353 37.037 0.00 0.00 0.00 1.47
1980 8441 7.708998 TCATCTACGCATGTACACAGTTTATA 58.291 34.615 0.00 0.00 0.00 0.98
1981 8442 6.569780 TCATCTACGCATGTACACAGTTTAT 58.430 36.000 0.00 0.00 0.00 1.40
1982 8443 5.956642 TCATCTACGCATGTACACAGTTTA 58.043 37.500 0.00 0.00 0.00 2.01
1983 8444 4.816392 TCATCTACGCATGTACACAGTTT 58.184 39.130 0.00 0.00 0.00 2.66
1984 8445 4.450082 TCATCTACGCATGTACACAGTT 57.550 40.909 0.00 0.00 0.00 3.16
1985 8446 4.082190 ACTTCATCTACGCATGTACACAGT 60.082 41.667 0.00 1.03 0.00 3.55
1986 8447 4.424626 ACTTCATCTACGCATGTACACAG 58.575 43.478 0.00 0.00 0.00 3.66
1987 8448 4.450082 ACTTCATCTACGCATGTACACA 57.550 40.909 0.00 0.00 0.00 3.72
1988 8449 5.051641 GCTAACTTCATCTACGCATGTACAC 60.052 44.000 0.00 0.00 0.00 2.90
1989 8450 5.041287 GCTAACTTCATCTACGCATGTACA 58.959 41.667 0.00 0.00 0.00 2.90
1990 8451 5.041287 TGCTAACTTCATCTACGCATGTAC 58.959 41.667 0.00 0.00 0.00 2.90
1991 8452 5.257082 TGCTAACTTCATCTACGCATGTA 57.743 39.130 0.00 0.00 0.00 2.29
1992 8453 4.123497 TGCTAACTTCATCTACGCATGT 57.877 40.909 0.00 0.00 0.00 3.21
1993 8454 5.438117 CAATGCTAACTTCATCTACGCATG 58.562 41.667 0.00 0.00 36.81 4.06
1994 8455 4.024556 GCAATGCTAACTTCATCTACGCAT 60.025 41.667 0.00 0.00 38.16 4.73
1995 8456 3.309682 GCAATGCTAACTTCATCTACGCA 59.690 43.478 0.00 0.00 0.00 5.24
1996 8457 3.602491 CGCAATGCTAACTTCATCTACGC 60.602 47.826 2.94 0.00 0.00 4.42
1997 8458 3.551890 ACGCAATGCTAACTTCATCTACG 59.448 43.478 2.94 0.00 0.00 3.51
1998 8459 4.826500 CACGCAATGCTAACTTCATCTAC 58.173 43.478 2.94 0.00 0.00 2.59
2012 8473 0.790207 AGAGTACAACGCACGCAATG 59.210 50.000 0.00 0.00 0.00 2.82
2013 8474 2.259618 CTAGAGTACAACGCACGCAAT 58.740 47.619 0.00 0.00 0.00 3.56
2014 8475 1.667756 CCTAGAGTACAACGCACGCAA 60.668 52.381 0.00 0.00 0.00 4.85
2015 8476 0.109458 CCTAGAGTACAACGCACGCA 60.109 55.000 0.00 0.00 0.00 5.24
2016 8477 0.109412 ACCTAGAGTACAACGCACGC 60.109 55.000 0.00 0.00 0.00 5.34
2017 8478 1.614385 CACCTAGAGTACAACGCACG 58.386 55.000 0.00 0.00 0.00 5.34
2018 8479 1.271656 ACCACCTAGAGTACAACGCAC 59.728 52.381 0.00 0.00 0.00 5.34
2019 8480 1.624336 ACCACCTAGAGTACAACGCA 58.376 50.000 0.00 0.00 0.00 5.24
2020 8481 2.738013 AACCACCTAGAGTACAACGC 57.262 50.000 0.00 0.00 0.00 4.84
2021 8482 4.219288 ACCTAAACCACCTAGAGTACAACG 59.781 45.833 0.00 0.00 0.00 4.10
2022 8483 5.735285 ACCTAAACCACCTAGAGTACAAC 57.265 43.478 0.00 0.00 0.00 3.32
2023 8484 6.752285 AAACCTAAACCACCTAGAGTACAA 57.248 37.500 0.00 0.00 0.00 2.41
2024 8485 6.100134 ACAAAACCTAAACCACCTAGAGTACA 59.900 38.462 0.00 0.00 0.00 2.90
2025 8486 6.528321 ACAAAACCTAAACCACCTAGAGTAC 58.472 40.000 0.00 0.00 0.00 2.73
2026 8487 6.752285 ACAAAACCTAAACCACCTAGAGTA 57.248 37.500 0.00 0.00 0.00 2.59
2027 8488 5.641789 ACAAAACCTAAACCACCTAGAGT 57.358 39.130 0.00 0.00 0.00 3.24
2028 8489 6.059484 TCAACAAAACCTAAACCACCTAGAG 58.941 40.000 0.00 0.00 0.00 2.43
2029 8490 6.003859 TCAACAAAACCTAAACCACCTAGA 57.996 37.500 0.00 0.00 0.00 2.43
2030 8491 5.240844 CCTCAACAAAACCTAAACCACCTAG 59.759 44.000 0.00 0.00 0.00 3.02
2031 8492 5.134661 CCTCAACAAAACCTAAACCACCTA 58.865 41.667 0.00 0.00 0.00 3.08
2032 8493 3.958147 CCTCAACAAAACCTAAACCACCT 59.042 43.478 0.00 0.00 0.00 4.00
2033 8494 3.702548 ACCTCAACAAAACCTAAACCACC 59.297 43.478 0.00 0.00 0.00 4.61
2034 8495 4.496840 CGACCTCAACAAAACCTAAACCAC 60.497 45.833 0.00 0.00 0.00 4.16
2035 8496 3.628487 CGACCTCAACAAAACCTAAACCA 59.372 43.478 0.00 0.00 0.00 3.67
2036 8497 3.878699 TCGACCTCAACAAAACCTAAACC 59.121 43.478 0.00 0.00 0.00 3.27
2037 8498 5.334646 GGATCGACCTCAACAAAACCTAAAC 60.335 44.000 0.00 0.00 35.41 2.01
2038 8499 4.758165 GGATCGACCTCAACAAAACCTAAA 59.242 41.667 0.00 0.00 35.41 1.85
2039 8500 4.320870 GGATCGACCTCAACAAAACCTAA 58.679 43.478 0.00 0.00 35.41 2.69
2040 8501 3.934068 GGATCGACCTCAACAAAACCTA 58.066 45.455 0.00 0.00 35.41 3.08
2041 8502 2.779506 GGATCGACCTCAACAAAACCT 58.220 47.619 0.00 0.00 35.41 3.50
2049 8510 8.110271 ATCTATACAGATAAGGATCGACCTCAA 58.890 37.037 6.96 0.79 41.56 3.02
2050 8511 7.634718 ATCTATACAGATAAGGATCGACCTCA 58.365 38.462 6.96 0.00 41.56 3.86
2051 8512 8.402472 CAATCTATACAGATAAGGATCGACCTC 58.598 40.741 6.96 0.00 43.77 3.85
2052 8513 7.891183 ACAATCTATACAGATAAGGATCGACCT 59.109 37.037 0.00 0.00 45.28 3.85
2053 8514 8.057536 ACAATCTATACAGATAAGGATCGACC 57.942 38.462 0.00 0.00 40.81 4.79
2056 8517 9.509855 GCTAACAATCTATACAGATAAGGATCG 57.490 37.037 0.00 0.00 40.81 3.69
2063 8524 9.588096 TCCTCAAGCTAACAATCTATACAGATA 57.412 33.333 0.00 0.00 40.81 1.98
2064 8525 8.484214 TCCTCAAGCTAACAATCTATACAGAT 57.516 34.615 0.00 0.00 43.67 2.90
2065 8526 7.898014 TCCTCAAGCTAACAATCTATACAGA 57.102 36.000 0.00 0.00 34.56 3.41
2066 8527 8.363390 TCATCCTCAAGCTAACAATCTATACAG 58.637 37.037 0.00 0.00 0.00 2.74
2067 8528 8.250143 TCATCCTCAAGCTAACAATCTATACA 57.750 34.615 0.00 0.00 0.00 2.29
2068 8529 9.717942 ATTCATCCTCAAGCTAACAATCTATAC 57.282 33.333 0.00 0.00 0.00 1.47
2069 8530 9.935241 GATTCATCCTCAAGCTAACAATCTATA 57.065 33.333 0.00 0.00 0.00 1.31
2070 8531 8.658619 AGATTCATCCTCAAGCTAACAATCTAT 58.341 33.333 0.00 0.00 0.00 1.98
2071 8532 8.027524 AGATTCATCCTCAAGCTAACAATCTA 57.972 34.615 0.00 0.00 0.00 1.98
2072 8533 6.897986 AGATTCATCCTCAAGCTAACAATCT 58.102 36.000 0.00 0.00 0.00 2.40
2073 8534 7.930865 ACTAGATTCATCCTCAAGCTAACAATC 59.069 37.037 0.00 0.00 0.00 2.67
2074 8535 7.800092 ACTAGATTCATCCTCAAGCTAACAAT 58.200 34.615 0.00 0.00 0.00 2.71
2075 8536 7.187824 ACTAGATTCATCCTCAAGCTAACAA 57.812 36.000 0.00 0.00 0.00 2.83
2076 8537 6.798427 ACTAGATTCATCCTCAAGCTAACA 57.202 37.500 0.00 0.00 0.00 2.41
2077 8538 8.198109 TGTTACTAGATTCATCCTCAAGCTAAC 58.802 37.037 0.00 0.00 0.00 2.34
2078 8539 8.306313 TGTTACTAGATTCATCCTCAAGCTAA 57.694 34.615 0.00 0.00 0.00 3.09
2079 8540 7.898014 TGTTACTAGATTCATCCTCAAGCTA 57.102 36.000 0.00 0.00 0.00 3.32
2080 8541 6.798427 TGTTACTAGATTCATCCTCAAGCT 57.202 37.500 0.00 0.00 0.00 3.74
2081 8542 6.258947 GGTTGTTACTAGATTCATCCTCAAGC 59.741 42.308 0.00 0.00 0.00 4.01
2082 8543 7.560368 AGGTTGTTACTAGATTCATCCTCAAG 58.440 38.462 0.00 0.00 0.00 3.02
2083 8544 7.496346 AGGTTGTTACTAGATTCATCCTCAA 57.504 36.000 0.00 0.00 0.00 3.02
2084 8545 8.603898 TTAGGTTGTTACTAGATTCATCCTCA 57.396 34.615 0.00 0.00 33.70 3.86
2085 8546 9.315525 GTTTAGGTTGTTACTAGATTCATCCTC 57.684 37.037 0.00 0.00 33.70 3.71
2086 8547 8.265764 GGTTTAGGTTGTTACTAGATTCATCCT 58.734 37.037 0.00 8.34 35.23 3.24
2087 8548 8.044908 TGGTTTAGGTTGTTACTAGATTCATCC 58.955 37.037 0.00 1.32 0.00 3.51
2088 8549 8.880750 GTGGTTTAGGTTGTTACTAGATTCATC 58.119 37.037 0.00 0.00 0.00 2.92
2089 8550 7.827729 GGTGGTTTAGGTTGTTACTAGATTCAT 59.172 37.037 0.00 0.00 0.00 2.57
2090 8551 7.016858 AGGTGGTTTAGGTTGTTACTAGATTCA 59.983 37.037 0.00 0.00 0.00 2.57
2091 8552 7.392418 AGGTGGTTTAGGTTGTTACTAGATTC 58.608 38.462 0.00 0.00 0.00 2.52
2092 8553 7.325725 AGGTGGTTTAGGTTGTTACTAGATT 57.674 36.000 0.00 0.00 0.00 2.40
2093 8554 6.947376 AGGTGGTTTAGGTTGTTACTAGAT 57.053 37.500 0.00 0.00 0.00 1.98
2094 8555 6.211384 GGTAGGTGGTTTAGGTTGTTACTAGA 59.789 42.308 0.00 0.00 0.00 2.43
2095 8556 6.401394 GGTAGGTGGTTTAGGTTGTTACTAG 58.599 44.000 0.00 0.00 0.00 2.57
2096 8557 5.047377 CGGTAGGTGGTTTAGGTTGTTACTA 60.047 44.000 0.00 0.00 0.00 1.82
2097 8558 4.262592 CGGTAGGTGGTTTAGGTTGTTACT 60.263 45.833 0.00 0.00 0.00 2.24
2098 8559 3.996363 CGGTAGGTGGTTTAGGTTGTTAC 59.004 47.826 0.00 0.00 0.00 2.50
2099 8560 3.645687 ACGGTAGGTGGTTTAGGTTGTTA 59.354 43.478 0.00 0.00 0.00 2.41
2100 8561 2.439135 ACGGTAGGTGGTTTAGGTTGTT 59.561 45.455 0.00 0.00 0.00 2.83
2101 8562 2.049372 ACGGTAGGTGGTTTAGGTTGT 58.951 47.619 0.00 0.00 0.00 3.32
2102 8563 2.845363 ACGGTAGGTGGTTTAGGTTG 57.155 50.000 0.00 0.00 0.00 3.77
2103 8564 6.612863 AGATTATACGGTAGGTGGTTTAGGTT 59.387 38.462 0.00 0.00 0.00 3.50
2104 8565 6.138967 AGATTATACGGTAGGTGGTTTAGGT 58.861 40.000 0.00 0.00 0.00 3.08
2105 8566 6.661304 AGATTATACGGTAGGTGGTTTAGG 57.339 41.667 0.00 0.00 0.00 2.69
2107 8568 9.243105 GGTATAGATTATACGGTAGGTGGTTTA 57.757 37.037 0.00 0.00 41.48 2.01
2108 8569 7.094205 CGGTATAGATTATACGGTAGGTGGTTT 60.094 40.741 0.00 0.00 41.48 3.27
2109 8570 6.375455 CGGTATAGATTATACGGTAGGTGGTT 59.625 42.308 0.00 0.00 41.48 3.67
2110 8571 5.882557 CGGTATAGATTATACGGTAGGTGGT 59.117 44.000 0.00 0.00 41.48 4.16
2111 8572 5.220931 GCGGTATAGATTATACGGTAGGTGG 60.221 48.000 12.44 0.00 41.48 4.61
2112 8573 5.587844 AGCGGTATAGATTATACGGTAGGTG 59.412 44.000 12.44 0.00 41.48 4.00
2113 8574 5.749462 AGCGGTATAGATTATACGGTAGGT 58.251 41.667 12.44 3.72 41.48 3.08
2114 8575 7.976135 ATAGCGGTATAGATTATACGGTAGG 57.024 40.000 5.08 0.00 41.48 3.18
2124 8585 9.938280 TTGCTTGTTTATATAGCGGTATAGATT 57.062 29.630 18.34 6.07 37.73 2.40
2126 8587 9.366216 CATTGCTTGTTTATATAGCGGTATAGA 57.634 33.333 18.34 12.11 37.73 1.98
2127 8588 8.116753 GCATTGCTTGTTTATATAGCGGTATAG 58.883 37.037 18.34 7.13 37.73 1.31
2128 8589 7.201487 CGCATTGCTTGTTTATATAGCGGTATA 60.201 37.037 16.12 16.12 37.73 1.47
2129 8590 6.402118 CGCATTGCTTGTTTATATAGCGGTAT 60.402 38.462 12.42 12.42 37.73 2.73
2130 8591 5.107259 CGCATTGCTTGTTTATATAGCGGTA 60.107 40.000 7.12 0.00 37.73 4.02
2131 8592 4.319477 CGCATTGCTTGTTTATATAGCGGT 60.319 41.667 7.12 0.00 37.73 5.68
2132 8593 4.151070 CGCATTGCTTGTTTATATAGCGG 58.849 43.478 7.12 0.00 37.73 5.52
2133 8594 4.772434 ACGCATTGCTTGTTTATATAGCG 58.228 39.130 7.12 0.00 45.96 4.26
2134 8595 5.147162 GGACGCATTGCTTGTTTATATAGC 58.853 41.667 7.12 0.00 35.50 2.97
2135 8596 5.470098 AGGGACGCATTGCTTGTTTATATAG 59.530 40.000 7.12 0.00 0.00 1.31
2136 8597 5.238432 CAGGGACGCATTGCTTGTTTATATA 59.762 40.000 7.12 0.00 0.00 0.86
2137 8598 4.036734 CAGGGACGCATTGCTTGTTTATAT 59.963 41.667 7.12 0.00 0.00 0.86
2138 8599 3.376859 CAGGGACGCATTGCTTGTTTATA 59.623 43.478 7.12 0.00 0.00 0.98
2139 8600 2.164219 CAGGGACGCATTGCTTGTTTAT 59.836 45.455 7.12 0.00 0.00 1.40
2140 8601 1.539388 CAGGGACGCATTGCTTGTTTA 59.461 47.619 7.12 0.00 0.00 2.01
2141 8602 0.314935 CAGGGACGCATTGCTTGTTT 59.685 50.000 7.12 0.00 0.00 2.83
2142 8603 1.959085 CAGGGACGCATTGCTTGTT 59.041 52.632 7.12 0.00 0.00 2.83
2143 8604 2.629656 GCAGGGACGCATTGCTTGT 61.630 57.895 7.12 0.00 35.05 3.16
2144 8605 1.026182 TAGCAGGGACGCATTGCTTG 61.026 55.000 10.83 0.00 45.28 4.01
2145 8606 0.322456 TTAGCAGGGACGCATTGCTT 60.322 50.000 10.83 0.00 45.28 3.91
2147 8608 1.429423 GTTAGCAGGGACGCATTGC 59.571 57.895 0.00 0.00 38.09 3.56
2148 8609 1.715585 CGTTAGCAGGGACGCATTG 59.284 57.895 0.00 0.00 32.11 2.82
2149 8610 4.201951 CGTTAGCAGGGACGCATT 57.798 55.556 0.00 0.00 32.11 3.56
2166 8627 2.989422 AAAGTGGTTGAAGCGTATGC 57.011 45.000 0.00 0.00 43.24 3.14
2167 8628 5.351233 TGTAAAAGTGGTTGAAGCGTATG 57.649 39.130 0.00 0.00 0.00 2.39
2168 8629 5.106317 CCATGTAAAAGTGGTTGAAGCGTAT 60.106 40.000 0.00 0.00 0.00 3.06
2169 8630 4.214545 CCATGTAAAAGTGGTTGAAGCGTA 59.785 41.667 0.00 0.00 0.00 4.42
2170 8631 3.004315 CCATGTAAAAGTGGTTGAAGCGT 59.996 43.478 0.00 0.00 0.00 5.07
2171 8632 3.004315 ACCATGTAAAAGTGGTTGAAGCG 59.996 43.478 0.00 0.00 46.22 4.68
2172 8633 4.584327 ACCATGTAAAAGTGGTTGAAGC 57.416 40.909 0.00 0.00 46.22 3.86
2173 8634 7.881142 TGAATACCATGTAAAAGTGGTTGAAG 58.119 34.615 2.02 0.00 46.22 3.02
2174 8635 7.721842 TCTGAATACCATGTAAAAGTGGTTGAA 59.278 33.333 2.02 0.00 46.22 2.69
2175 8636 7.227873 TCTGAATACCATGTAAAAGTGGTTGA 58.772 34.615 2.02 0.00 46.22 3.18
2176 8637 7.447374 TCTGAATACCATGTAAAAGTGGTTG 57.553 36.000 2.02 0.00 46.22 3.77
2177 8638 6.151144 GCTCTGAATACCATGTAAAAGTGGTT 59.849 38.462 2.02 0.00 46.22 3.67
2179 8640 5.066505 GGCTCTGAATACCATGTAAAAGTGG 59.933 44.000 0.00 0.00 41.35 4.00
2180 8641 5.882557 AGGCTCTGAATACCATGTAAAAGTG 59.117 40.000 0.00 0.00 0.00 3.16
2181 8642 6.067217 AGGCTCTGAATACCATGTAAAAGT 57.933 37.500 0.00 0.00 0.00 2.66
2182 8643 8.398665 GTTTAGGCTCTGAATACCATGTAAAAG 58.601 37.037 0.00 0.00 0.00 2.27
2183 8644 8.107095 AGTTTAGGCTCTGAATACCATGTAAAA 58.893 33.333 0.00 0.00 0.00 1.52
2184 8645 7.630082 AGTTTAGGCTCTGAATACCATGTAAA 58.370 34.615 0.00 0.00 0.00 2.01
2185 8646 7.125811 AGAGTTTAGGCTCTGAATACCATGTAA 59.874 37.037 0.00 0.00 43.54 2.41
2186 8647 6.611642 AGAGTTTAGGCTCTGAATACCATGTA 59.388 38.462 0.00 0.00 43.54 2.29
2187 8648 5.426833 AGAGTTTAGGCTCTGAATACCATGT 59.573 40.000 0.00 0.00 43.54 3.21
2188 8649 5.923204 AGAGTTTAGGCTCTGAATACCATG 58.077 41.667 0.00 0.00 43.54 3.66
2189 8650 6.239458 GCTAGAGTTTAGGCTCTGAATACCAT 60.239 42.308 5.92 0.00 44.71 3.55
2190 8651 5.069251 GCTAGAGTTTAGGCTCTGAATACCA 59.931 44.000 5.92 0.00 44.71 3.25
2191 8652 5.069251 TGCTAGAGTTTAGGCTCTGAATACC 59.931 44.000 5.92 0.00 44.71 2.73
2192 8653 5.980715 GTGCTAGAGTTTAGGCTCTGAATAC 59.019 44.000 5.92 0.00 44.71 1.89
2193 8654 5.656859 TGTGCTAGAGTTTAGGCTCTGAATA 59.343 40.000 5.92 0.00 44.71 1.75
2194 8655 4.467795 TGTGCTAGAGTTTAGGCTCTGAAT 59.532 41.667 5.92 0.00 44.71 2.57
2195 8656 3.832490 TGTGCTAGAGTTTAGGCTCTGAA 59.168 43.478 5.92 0.00 44.71 3.02
2196 8657 3.431415 TGTGCTAGAGTTTAGGCTCTGA 58.569 45.455 5.92 0.00 44.71 3.27
2197 8658 3.876274 TGTGCTAGAGTTTAGGCTCTG 57.124 47.619 5.92 0.00 44.71 3.35
2198 8659 4.285863 AGATGTGCTAGAGTTTAGGCTCT 58.714 43.478 0.00 1.16 46.49 4.09
2199 8660 4.664150 AGATGTGCTAGAGTTTAGGCTC 57.336 45.455 0.00 0.00 35.82 4.70
2200 8661 6.546428 TTTAGATGTGCTAGAGTTTAGGCT 57.454 37.500 0.00 0.00 0.00 4.58
2201 8662 6.037281 GGTTTTAGATGTGCTAGAGTTTAGGC 59.963 42.308 0.00 0.00 0.00 3.93
2202 8663 6.539103 GGGTTTTAGATGTGCTAGAGTTTAGG 59.461 42.308 0.00 0.00 0.00 2.69
2203 8664 7.103641 TGGGTTTTAGATGTGCTAGAGTTTAG 58.896 38.462 0.00 0.00 0.00 1.85
2204 8665 7.011499 TGGGTTTTAGATGTGCTAGAGTTTA 57.989 36.000 0.00 0.00 0.00 2.01
2205 8666 5.876357 TGGGTTTTAGATGTGCTAGAGTTT 58.124 37.500 0.00 0.00 0.00 2.66
2206 8667 5.499004 TGGGTTTTAGATGTGCTAGAGTT 57.501 39.130 0.00 0.00 0.00 3.01
2207 8668 5.189736 TGATGGGTTTTAGATGTGCTAGAGT 59.810 40.000 0.00 0.00 0.00 3.24
2208 8669 5.525378 GTGATGGGTTTTAGATGTGCTAGAG 59.475 44.000 0.00 0.00 0.00 2.43
2209 8670 5.428253 GTGATGGGTTTTAGATGTGCTAGA 58.572 41.667 0.00 0.00 0.00 2.43
2210 8671 4.576463 GGTGATGGGTTTTAGATGTGCTAG 59.424 45.833 0.00 0.00 0.00 3.42
2211 8672 4.018870 TGGTGATGGGTTTTAGATGTGCTA 60.019 41.667 0.00 0.00 0.00 3.49
2212 8673 3.245229 TGGTGATGGGTTTTAGATGTGCT 60.245 43.478 0.00 0.00 0.00 4.40
2213 8674 3.088532 TGGTGATGGGTTTTAGATGTGC 58.911 45.455 0.00 0.00 0.00 4.57
2214 8675 4.098349 CCATGGTGATGGGTTTTAGATGTG 59.902 45.833 2.57 0.00 45.11 3.21
2215 8676 4.280819 CCATGGTGATGGGTTTTAGATGT 58.719 43.478 2.57 0.00 45.11 3.06
2216 8677 4.924305 CCATGGTGATGGGTTTTAGATG 57.076 45.455 2.57 0.00 45.11 2.90
2227 8688 1.747355 GAGTTTGAGGCCATGGTGATG 59.253 52.381 14.67 0.00 0.00 3.07
2228 8689 1.341383 GGAGTTTGAGGCCATGGTGAT 60.341 52.381 14.67 0.00 0.00 3.06
2229 8690 0.038166 GGAGTTTGAGGCCATGGTGA 59.962 55.000 14.67 0.00 0.00 4.02
2230 8691 1.308069 CGGAGTTTGAGGCCATGGTG 61.308 60.000 14.67 0.00 0.00 4.17
2231 8692 1.002134 CGGAGTTTGAGGCCATGGT 60.002 57.895 14.67 0.00 0.00 3.55
2232 8693 2.409870 GCGGAGTTTGAGGCCATGG 61.410 63.158 7.63 7.63 0.00 3.66
2233 8694 2.409870 GGCGGAGTTTGAGGCCATG 61.410 63.158 5.01 0.00 44.91 3.66
2234 8695 2.044946 GGCGGAGTTTGAGGCCAT 60.045 61.111 5.01 0.00 44.91 4.40
2236 8697 3.056328 GTGGCGGAGTTTGAGGCC 61.056 66.667 0.00 0.00 45.76 5.19
2237 8698 3.056328 GGTGGCGGAGTTTGAGGC 61.056 66.667 0.00 0.00 0.00 4.70
2238 8699 2.742372 CGGTGGCGGAGTTTGAGG 60.742 66.667 0.00 0.00 0.00 3.86
2239 8700 3.423154 GCGGTGGCGGAGTTTGAG 61.423 66.667 0.00 0.00 0.00 3.02
2262 8723 2.825836 GAATGAGGGCTGGTGCGG 60.826 66.667 0.00 0.00 40.82 5.69
2263 8724 2.825836 GGAATGAGGGCTGGTGCG 60.826 66.667 0.00 0.00 40.82 5.34
2264 8725 2.440980 GGGAATGAGGGCTGGTGC 60.441 66.667 0.00 0.00 38.76 5.01
2265 8726 0.466922 GATGGGAATGAGGGCTGGTG 60.467 60.000 0.00 0.00 0.00 4.17
2266 8727 1.925888 GATGGGAATGAGGGCTGGT 59.074 57.895 0.00 0.00 0.00 4.00
2267 8728 1.228063 CGATGGGAATGAGGGCTGG 60.228 63.158 0.00 0.00 0.00 4.85
2268 8729 1.895707 GCGATGGGAATGAGGGCTG 60.896 63.158 0.00 0.00 0.00 4.85
2269 8730 2.512896 GCGATGGGAATGAGGGCT 59.487 61.111 0.00 0.00 0.00 5.19
2270 8731 2.595754 GGCGATGGGAATGAGGGC 60.596 66.667 0.00 0.00 0.00 5.19
2271 8732 2.116983 ATCGGCGATGGGAATGAGGG 62.117 60.000 23.36 0.00 0.00 4.30
2272 8733 0.671781 GATCGGCGATGGGAATGAGG 60.672 60.000 29.20 0.00 0.00 3.86
2273 8734 1.010935 CGATCGGCGATGGGAATGAG 61.011 60.000 29.20 4.19 44.57 2.90
2274 8735 1.006220 CGATCGGCGATGGGAATGA 60.006 57.895 29.20 0.00 44.57 2.57
2275 8736 2.671177 GCGATCGGCGATGGGAATG 61.671 63.158 29.20 10.38 44.57 2.67
2276 8737 2.357517 GCGATCGGCGATGGGAAT 60.358 61.111 29.20 1.61 44.57 3.01
2277 8738 4.602259 GGCGATCGGCGATGGGAA 62.602 66.667 29.20 0.00 44.92 3.97
2281 8742 3.580100 ATGGAGGCGATCGGCGATG 62.580 63.158 32.35 19.40 44.92 3.84
2282 8743 3.288308 GATGGAGGCGATCGGCGAT 62.288 63.158 32.35 24.26 44.92 4.58
2283 8744 3.978491 GATGGAGGCGATCGGCGA 61.978 66.667 32.35 21.80 44.92 5.54
2286 8747 2.626780 TAGCGATGGAGGCGATCGG 61.627 63.158 18.30 0.00 41.17 4.18
2287 8748 1.442857 GTAGCGATGGAGGCGATCG 60.443 63.158 11.69 11.69 43.09 3.69
2288 8749 0.032130 TTGTAGCGATGGAGGCGATC 59.968 55.000 0.00 0.00 35.00 3.69
2289 8750 0.249489 GTTGTAGCGATGGAGGCGAT 60.249 55.000 0.00 0.00 35.00 4.58
2290 8751 1.141019 GTTGTAGCGATGGAGGCGA 59.859 57.895 0.00 0.00 35.00 5.54
2291 8752 0.460284 AAGTTGTAGCGATGGAGGCG 60.460 55.000 0.00 0.00 35.00 5.52
2292 8753 1.291132 GAAGTTGTAGCGATGGAGGC 58.709 55.000 0.00 0.00 0.00 4.70
2293 8754 1.482593 AGGAAGTTGTAGCGATGGAGG 59.517 52.381 0.00 0.00 0.00 4.30
2294 8755 2.544685 CAGGAAGTTGTAGCGATGGAG 58.455 52.381 0.00 0.00 0.00 3.86
2295 8756 1.207089 CCAGGAAGTTGTAGCGATGGA 59.793 52.381 0.00 0.00 0.00 3.41
2296 8757 1.066143 ACCAGGAAGTTGTAGCGATGG 60.066 52.381 0.00 0.00 0.00 3.51
2297 8758 2.002586 CACCAGGAAGTTGTAGCGATG 58.997 52.381 0.00 0.00 0.00 3.84
2298 8759 1.623811 ACACCAGGAAGTTGTAGCGAT 59.376 47.619 0.00 0.00 0.00 4.58
2299 8760 1.045407 ACACCAGGAAGTTGTAGCGA 58.955 50.000 0.00 0.00 0.00 4.93
2300 8761 1.148310 CACACCAGGAAGTTGTAGCG 58.852 55.000 0.00 0.00 0.00 4.26
2301 8762 1.523758 CCACACCAGGAAGTTGTAGC 58.476 55.000 0.00 0.00 0.00 3.58
2302 8763 1.202758 TGCCACACCAGGAAGTTGTAG 60.203 52.381 0.00 0.00 0.00 2.74
2303 8764 0.840617 TGCCACACCAGGAAGTTGTA 59.159 50.000 0.00 0.00 0.00 2.41
2304 8765 0.185901 ATGCCACACCAGGAAGTTGT 59.814 50.000 0.00 0.00 0.00 3.32
2305 8766 0.599558 CATGCCACACCAGGAAGTTG 59.400 55.000 0.00 0.00 0.00 3.16
2306 8767 1.181098 GCATGCCACACCAGGAAGTT 61.181 55.000 6.36 0.00 0.00 2.66
2307 8768 1.604593 GCATGCCACACCAGGAAGT 60.605 57.895 6.36 0.00 0.00 3.01
2308 8769 2.345760 GGCATGCCACACCAGGAAG 61.346 63.158 32.08 0.00 35.81 3.46
2309 8770 2.283101 GGCATGCCACACCAGGAA 60.283 61.111 32.08 0.00 35.81 3.36
2310 8771 4.365111 GGGCATGCCACACCAGGA 62.365 66.667 36.56 0.00 37.98 3.86
2311 8772 4.682334 TGGGCATGCCACACCAGG 62.682 66.667 36.56 0.00 37.98 4.45
2312 8773 2.601067 TTGGGCATGCCACACCAG 60.601 61.111 36.56 0.00 37.98 4.00
2313 8774 2.601067 CTTGGGCATGCCACACCA 60.601 61.111 36.56 22.83 37.98 4.17
2314 8775 4.073200 GCTTGGGCATGCCACACC 62.073 66.667 36.56 20.41 38.54 4.16
2315 8776 4.424566 CGCTTGGGCATGCCACAC 62.425 66.667 36.56 20.78 38.60 3.82
2318 8779 4.992740 AACCGCTTGGGCATGCCA 62.993 61.111 36.56 20.63 40.62 4.92
2319 8780 4.440127 CAACCGCTTGGGCATGCC 62.440 66.667 29.47 29.47 40.62 4.40
2330 8791 2.126346 GTTGATGGCAGCAACCGC 60.126 61.111 32.32 12.59 39.67 5.68
2331 8792 1.210931 CAGTTGATGGCAGCAACCG 59.789 57.895 36.59 27.19 45.05 4.44
2332 8793 1.080298 GCAGTTGATGGCAGCAACC 60.080 57.895 36.59 22.98 45.05 3.77
2333 8794 1.443194 CGCAGTTGATGGCAGCAAC 60.443 57.895 34.45 34.45 44.46 4.17
2334 8795 2.956194 CGCAGTTGATGGCAGCAA 59.044 55.556 15.11 15.11 0.00 3.91
2335 8796 3.740397 GCGCAGTTGATGGCAGCA 61.740 61.111 0.00 0.00 32.55 4.41
2336 8797 4.487412 GGCGCAGTTGATGGCAGC 62.487 66.667 10.83 0.00 0.00 5.25
2337 8798 3.818787 GGGCGCAGTTGATGGCAG 61.819 66.667 10.83 0.00 0.00 4.85
2338 8799 4.657408 TGGGCGCAGTTGATGGCA 62.657 61.111 10.83 0.00 0.00 4.92
2339 8800 3.372730 TTGGGCGCAGTTGATGGC 61.373 61.111 10.83 0.00 0.00 4.40
2340 8801 1.926511 GAGTTGGGCGCAGTTGATGG 61.927 60.000 10.83 0.00 0.00 3.51
2341 8802 1.236616 TGAGTTGGGCGCAGTTGATG 61.237 55.000 10.83 0.00 0.00 3.07
2342 8803 0.322816 ATGAGTTGGGCGCAGTTGAT 60.323 50.000 10.83 0.00 0.00 2.57
2343 8804 0.955428 GATGAGTTGGGCGCAGTTGA 60.955 55.000 10.83 0.00 0.00 3.18
2344 8805 0.957395 AGATGAGTTGGGCGCAGTTG 60.957 55.000 10.83 0.00 0.00 3.16
2345 8806 0.674895 GAGATGAGTTGGGCGCAGTT 60.675 55.000 10.83 0.00 0.00 3.16
2346 8807 1.078848 GAGATGAGTTGGGCGCAGT 60.079 57.895 10.83 0.00 0.00 4.40
2347 8808 1.817099 GGAGATGAGTTGGGCGCAG 60.817 63.158 10.83 0.00 0.00 5.18
2348 8809 1.841302 AAGGAGATGAGTTGGGCGCA 61.841 55.000 10.83 0.00 0.00 6.09
2349 8810 1.078143 AAGGAGATGAGTTGGGCGC 60.078 57.895 0.00 0.00 0.00 6.53
2350 8811 0.250234 TGAAGGAGATGAGTTGGGCG 59.750 55.000 0.00 0.00 0.00 6.13
2351 8812 2.092753 TGATGAAGGAGATGAGTTGGGC 60.093 50.000 0.00 0.00 0.00 5.36
2352 8813 3.920231 TGATGAAGGAGATGAGTTGGG 57.080 47.619 0.00 0.00 0.00 4.12
2353 8814 4.820716 GGATTGATGAAGGAGATGAGTTGG 59.179 45.833 0.00 0.00 0.00 3.77
2354 8815 5.434408 TGGATTGATGAAGGAGATGAGTTG 58.566 41.667 0.00 0.00 0.00 3.16
2355 8816 5.705397 TGGATTGATGAAGGAGATGAGTT 57.295 39.130 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.