Multiple sequence alignment - TraesCS2D01G449700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G449700 chr2D 100.000 4611 0 0 1 4611 559306479 559301869 0.000000e+00 8516.0
1 TraesCS2D01G449700 chr2D 87.387 1998 208 19 1907 3881 559211974 559209998 0.000000e+00 2254.0
2 TraesCS2D01G449700 chr2D 85.312 1348 129 26 771 2071 559212979 559211654 0.000000e+00 1328.0
3 TraesCS2D01G449700 chr2D 76.294 734 147 17 2068 2789 559211429 559210711 2.620000e-97 366.0
4 TraesCS2D01G449700 chr2D 86.667 330 44 0 1743 2072 559304575 559304246 2.620000e-97 366.0
5 TraesCS2D01G449700 chr2D 81.223 458 51 26 3990 4416 559209803 559209350 2.060000e-88 337.0
6 TraesCS2D01G449700 chr2D 84.699 183 28 0 1729 1911 559211444 559211262 2.830000e-42 183.0
7 TraesCS2D01G449700 chr2D 79.167 168 30 3 2224 2387 559210889 559210723 1.360000e-20 111.0
8 TraesCS2D01G449700 chr2D 100.000 28 0 0 4373 4400 28966943 28966916 8.000000e-03 52.8
9 TraesCS2D01G449700 chr2A 84.591 2570 306 38 1905 4422 699798987 699796456 0.000000e+00 2470.0
10 TraesCS2D01G449700 chr2A 93.884 1586 78 8 665 2234 699854104 699852522 0.000000e+00 2374.0
11 TraesCS2D01G449700 chr2A 88.476 1614 147 15 2142 3740 699852500 699850911 0.000000e+00 1914.0
12 TraesCS2D01G449700 chr2A 85.089 1348 136 27 771 2071 699799988 699798659 0.000000e+00 1315.0
13 TraesCS2D01G449700 chr2A 92.575 633 44 1 1 630 699854737 699854105 0.000000e+00 905.0
14 TraesCS2D01G449700 chr2A 88.319 351 41 0 1743 2093 699852851 699852501 5.520000e-114 422.0
15 TraesCS2D01G449700 chr2B 84.540 1436 147 43 3035 4422 668175004 668173596 0.000000e+00 1352.0
16 TraesCS2D01G449700 chr2B 89.276 1091 92 8 1005 2071 668183022 668181933 0.000000e+00 1343.0
17 TraesCS2D01G449700 chr2B 88.548 978 97 5 2067 3038 668181709 668180741 0.000000e+00 1171.0
18 TraesCS2D01G449700 chr2B 81.531 1267 208 11 1908 3164 668182258 668181008 0.000000e+00 1020.0
19 TraesCS2D01G449700 chr2B 78.249 731 149 5 2457 3182 668182099 668181374 1.170000e-125 460.0
20 TraesCS2D01G449700 chr2B 96.139 259 9 1 753 1010 668224563 668224305 5.520000e-114 422.0
21 TraesCS2D01G449700 chr2B 79.287 449 79 6 2067 2511 668181316 668180878 7.500000e-78 302.0
22 TraesCS2D01G449700 chr5B 91.522 519 41 1 2602 3117 339532874 339532356 0.000000e+00 712.0
23 TraesCS2D01G449700 chr5B 76.583 521 110 7 2212 2723 339532874 339532357 4.540000e-70 276.0
24 TraesCS2D01G449700 chr5A 84.733 262 40 0 1 262 401509714 401509975 3.540000e-66 263.0
25 TraesCS2D01G449700 chr7A 91.489 47 1 3 4564 4607 695373208 695373162 1.390000e-05 62.1
26 TraesCS2D01G449700 chrUn 91.111 45 2 1 4568 4610 277594211 277594255 4.980000e-05 60.2
27 TraesCS2D01G449700 chr3B 91.111 45 2 1 4568 4610 765726746 765726790 4.980000e-05 60.2
28 TraesCS2D01G449700 chr3B 96.875 32 0 1 4564 4594 636256896 636256865 8.000000e-03 52.8
29 TraesCS2D01G449700 chr7D 96.970 33 0 1 4564 4595 386644614 386644582 2.000000e-03 54.7
30 TraesCS2D01G449700 chr3A 96.970 33 0 1 4564 4595 92537125 92537093 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G449700 chr2D 559301869 559306479 4610 True 4441.000000 8516 93.3335 1 4611 2 chr2D.!!$R3 4610
1 TraesCS2D01G449700 chr2D 559209350 559212979 3629 True 763.166667 2254 82.3470 771 4416 6 chr2D.!!$R2 3645
2 TraesCS2D01G449700 chr2A 699796456 699799988 3532 True 1892.500000 2470 84.8400 771 4422 2 chr2A.!!$R1 3651
3 TraesCS2D01G449700 chr2A 699850911 699854737 3826 True 1403.750000 2374 90.8135 1 3740 4 chr2A.!!$R2 3739
4 TraesCS2D01G449700 chr2B 668173596 668175004 1408 True 1352.000000 1352 84.5400 3035 4422 1 chr2B.!!$R1 1387
5 TraesCS2D01G449700 chr2B 668180741 668183022 2281 True 859.200000 1343 83.3782 1005 3182 5 chr2B.!!$R3 2177
6 TraesCS2D01G449700 chr5B 339532356 339532874 518 True 494.000000 712 84.0525 2212 3117 2 chr5B.!!$R1 905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 397 0.036732 ATGGTTTCTGGCGCTCAAGA 59.963 50.0 7.64 5.57 0.00 3.02 F
1784 1864 0.321671 GTGGCCTGTGCAGAGAAGTA 59.678 55.0 13.38 0.00 40.13 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2105 2185 0.392193 CACAGAGGATCCACTGCACC 60.392 60.000 31.87 5.88 38.01 5.01 R
3757 4364 1.065854 GTAGCAGCAGGTGTGAAGGAT 60.066 52.381 0.66 0.00 0.00 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 1.897802 CCCGGACTACCTTGTACTTGT 59.102 52.381 0.73 0.00 0.00 3.16
49 50 4.038883 GGACTACCTTGTACTTGTCAGTGT 59.961 45.833 0.00 0.00 34.06 3.55
87 88 0.600255 CCGTCGGGAGGAACATATGC 60.600 60.000 2.34 0.00 34.06 3.14
96 97 3.561725 GGAGGAACATATGCTTGTACTGC 59.438 47.826 1.58 0.00 0.00 4.40
105 106 1.064803 TGCTTGTACTGCGTTTTGGTG 59.935 47.619 0.00 0.00 0.00 4.17
115 116 1.534385 GCGTTTTGGTGCGGTTACTTT 60.534 47.619 0.00 0.00 0.00 2.66
116 117 2.799871 CGTTTTGGTGCGGTTACTTTT 58.200 42.857 0.00 0.00 0.00 2.27
132 133 4.223320 ACTTTTAGGCAACGTCATTGTG 57.777 40.909 0.00 0.00 46.39 3.33
155 156 0.107017 CTGGTGGCCGGATTGAAGAT 60.107 55.000 5.05 0.00 29.82 2.40
162 163 2.103263 GGCCGGATTGAAGATGTAGAGT 59.897 50.000 5.05 0.00 0.00 3.24
194 195 1.374758 GGAAGAGCACCAGACCGTG 60.375 63.158 0.00 0.00 36.80 4.94
212 213 4.402851 GCAGTGGGCAATGTGAGA 57.597 55.556 0.00 0.00 43.97 3.27
222 223 3.432749 GGGCAATGTGAGAGATTGAGCTA 60.433 47.826 0.00 0.00 33.36 3.32
225 226 5.298777 GGCAATGTGAGAGATTGAGCTAAAT 59.701 40.000 0.00 0.00 33.36 1.40
228 229 7.201714 GCAATGTGAGAGATTGAGCTAAATTCT 60.202 37.037 0.00 3.33 33.36 2.40
231 232 6.070596 TGTGAGAGATTGAGCTAAATTCTCCA 60.071 38.462 21.32 17.72 30.69 3.86
234 235 5.046288 AGATTGAGCTAAATTCTCCAGGG 57.954 43.478 0.00 0.00 0.00 4.45
245 246 2.103153 TCTCCAGGGAAGTCAGTTGT 57.897 50.000 0.00 0.00 0.00 3.32
246 247 1.694150 TCTCCAGGGAAGTCAGTTGTG 59.306 52.381 0.00 0.00 0.00 3.33
254 255 2.618241 GGAAGTCAGTTGTGTGCATCAA 59.382 45.455 0.00 0.00 0.00 2.57
264 265 3.749226 TGTGTGCATCAACCTTGTATCA 58.251 40.909 0.00 0.00 0.00 2.15
301 302 1.888436 CTGCCACTGGTAGAAGCGGA 61.888 60.000 7.38 0.00 37.63 5.54
323 324 0.923358 TGGGTTGAGAAGGTGGTTGT 59.077 50.000 0.00 0.00 0.00 3.32
375 376 0.179009 CGTGGGGAATGATGAGCCAT 60.179 55.000 0.00 0.00 0.00 4.40
396 397 0.036732 ATGGTTTCTGGCGCTCAAGA 59.963 50.000 7.64 5.57 0.00 3.02
408 409 1.609072 CGCTCAAGATGACTCCGGATA 59.391 52.381 3.57 0.00 0.00 2.59
431 432 0.914417 ATGGGGTCGGAGATGGTTGT 60.914 55.000 0.00 0.00 40.67 3.32
444 445 1.228429 GGTTGTGCACCAGGCCTTA 60.228 57.895 15.69 0.00 46.42 2.69
488 489 1.294659 GACTTCACTGGCAGCCGAAG 61.295 60.000 30.71 30.71 40.54 3.79
517 518 2.562738 TCGAGAACAAGCTCTTCCATCA 59.437 45.455 0.00 0.00 32.71 3.07
544 545 2.464459 GGACATCTTGCCGCCTTCG 61.464 63.158 0.00 0.00 0.00 3.79
557 558 0.458260 GCCTTCGTCTCCCTCTTCTC 59.542 60.000 0.00 0.00 0.00 2.87
560 561 1.131504 CTTCGTCTCCCTCTTCTCACG 59.868 57.143 0.00 0.00 0.00 4.35
576 577 3.574396 TCTCACGAGTCTTCAAGTCCATT 59.426 43.478 0.00 0.00 0.00 3.16
600 601 3.125829 CGTACATGCAGCAAGAAACAGAT 59.874 43.478 4.23 0.00 0.00 2.90
605 606 5.939883 ACATGCAGCAAGAAACAGATTAGTA 59.060 36.000 4.23 0.00 0.00 1.82
610 611 6.700020 CAGCAAGAAACAGATTAGTACGATG 58.300 40.000 0.00 0.00 0.00 3.84
632 636 4.604976 GCTTAATAGCTCTGCATTGTTGG 58.395 43.478 0.00 0.00 44.27 3.77
633 637 4.604976 CTTAATAGCTCTGCATTGTTGGC 58.395 43.478 0.00 0.00 0.00 4.52
634 638 1.019673 ATAGCTCTGCATTGTTGGCG 58.980 50.000 0.00 0.00 0.00 5.69
635 639 1.647545 TAGCTCTGCATTGTTGGCGC 61.648 55.000 0.00 0.00 0.00 6.53
636 640 2.956194 CTCTGCATTGTTGGCGCA 59.044 55.556 10.83 0.00 0.00 6.09
637 641 1.509463 CTCTGCATTGTTGGCGCAT 59.491 52.632 10.83 0.00 34.63 4.73
638 642 0.734309 CTCTGCATTGTTGGCGCATA 59.266 50.000 10.83 0.00 34.63 3.14
639 643 1.335810 CTCTGCATTGTTGGCGCATAT 59.664 47.619 10.83 0.00 34.63 1.78
640 644 2.549329 CTCTGCATTGTTGGCGCATATA 59.451 45.455 10.83 0.00 34.63 0.86
641 645 3.148412 TCTGCATTGTTGGCGCATATAT 58.852 40.909 10.83 0.00 34.63 0.86
642 646 3.058085 TCTGCATTGTTGGCGCATATATG 60.058 43.478 10.83 8.45 34.63 1.78
643 647 2.622470 TGCATTGTTGGCGCATATATGT 59.378 40.909 10.83 0.00 0.00 2.29
644 648 3.817647 TGCATTGTTGGCGCATATATGTA 59.182 39.130 10.83 2.58 0.00 2.29
645 649 4.083377 TGCATTGTTGGCGCATATATGTAG 60.083 41.667 10.83 9.70 0.00 2.74
646 650 4.672542 GCATTGTTGGCGCATATATGTAGG 60.673 45.833 10.83 5.57 0.00 3.18
647 651 3.052455 TGTTGGCGCATATATGTAGGG 57.948 47.619 10.83 3.31 0.00 3.53
648 652 2.635427 TGTTGGCGCATATATGTAGGGA 59.365 45.455 10.83 0.00 0.00 4.20
649 653 3.071747 TGTTGGCGCATATATGTAGGGAA 59.928 43.478 10.83 0.00 0.00 3.97
650 654 3.328382 TGGCGCATATATGTAGGGAAC 57.672 47.619 10.83 0.00 0.00 3.62
651 655 2.635427 TGGCGCATATATGTAGGGAACA 59.365 45.455 10.83 2.35 43.86 3.18
652 656 3.262420 GGCGCATATATGTAGGGAACAG 58.738 50.000 10.83 0.00 42.70 3.16
653 657 3.056107 GGCGCATATATGTAGGGAACAGA 60.056 47.826 10.83 0.00 42.70 3.41
654 658 4.383118 GGCGCATATATGTAGGGAACAGAT 60.383 45.833 10.83 0.00 42.70 2.90
655 659 5.163447 GGCGCATATATGTAGGGAACAGATA 60.163 44.000 10.83 0.00 44.23 1.98
656 660 6.338146 GCGCATATATGTAGGGAACAGATAA 58.662 40.000 14.14 0.00 43.55 1.75
657 661 6.477033 GCGCATATATGTAGGGAACAGATAAG 59.523 42.308 14.14 0.00 43.55 1.73
658 662 7.630728 GCGCATATATGTAGGGAACAGATAAGA 60.631 40.741 14.14 0.00 43.55 2.10
659 663 8.417106 CGCATATATGTAGGGAACAGATAAGAT 58.583 37.037 14.14 0.00 43.55 2.40
660 664 9.539825 GCATATATGTAGGGAACAGATAAGATG 57.460 37.037 14.14 0.00 43.55 2.90
663 667 5.537300 TGTAGGGAACAGATAAGATGAGC 57.463 43.478 0.00 0.00 33.01 4.26
709 713 7.621796 GGAGACCGTCCATAAATAAATATCCT 58.378 38.462 0.00 0.00 46.10 3.24
739 743 9.550406 TTTTCTTCCGTAATCTCTTTTTGAGTA 57.450 29.630 0.00 0.00 43.13 2.59
740 744 9.550406 TTTCTTCCGTAATCTCTTTTTGAGTAA 57.450 29.630 0.00 0.00 43.13 2.24
741 745 8.530269 TCTTCCGTAATCTCTTTTTGAGTAAC 57.470 34.615 0.00 0.00 43.13 2.50
747 760 8.648968 CGTAATCTCTTTTTGAGTAACTCTTCC 58.351 37.037 0.00 0.00 43.13 3.46
830 843 3.140814 GGGCGGCCCATTCAGTTC 61.141 66.667 32.90 1.31 44.65 3.01
839 852 2.509336 ATTCAGTTCTCGCCGCCG 60.509 61.111 0.00 0.00 0.00 6.46
985 1021 4.778143 ATTCCCGCCGCTCGCTTT 62.778 61.111 0.00 0.00 36.73 3.51
1144 1197 1.153997 GTCTCACCGGAGTTCGCTC 60.154 63.158 9.46 0.00 42.05 5.03
1159 1212 1.604593 GCTCTTCTTGCAGGCCCAA 60.605 57.895 0.00 0.00 0.00 4.12
1209 1262 3.782443 CCGTGGGTGCCCTCTACC 61.782 72.222 8.91 0.00 37.48 3.18
1242 1301 9.865321 CATGAATTTCCATTATCTGTTCTGTTT 57.135 29.630 0.00 0.00 0.00 2.83
1246 1308 6.721571 TTCCATTATCTGTTCTGTTTCGAC 57.278 37.500 0.00 0.00 0.00 4.20
1247 1309 4.862574 TCCATTATCTGTTCTGTTTCGACG 59.137 41.667 0.00 0.00 0.00 5.12
1342 1404 3.755378 TCTCAAGTTACCAGTACGAGTCC 59.245 47.826 0.00 0.00 0.00 3.85
1510 1575 9.860650 TGTATTCTTACCCATTATATTTGCTGT 57.139 29.630 0.00 0.00 0.00 4.40
1641 1712 2.015588 GCATGCTGAGGCTTCTGCTAA 61.016 52.381 24.40 9.28 45.44 3.09
1659 1730 4.098654 TGCTAAGAGAGATTTCCTTCCGAG 59.901 45.833 0.00 0.00 0.00 4.63
1767 1847 1.234615 ACTGAAAATCGGGTGGCGTG 61.235 55.000 0.00 0.00 0.00 5.34
1784 1864 0.321671 GTGGCCTGTGCAGAGAAGTA 59.678 55.000 13.38 0.00 40.13 2.24
1941 2021 3.286751 GGCGTTGCCTGTGCTGAA 61.287 61.111 0.00 0.00 46.69 3.02
1959 2039 2.224281 TGAAAAGTGCAGTGGATCGTCT 60.224 45.455 0.00 0.00 0.00 4.18
2057 2137 3.948473 GACAGATAGTGAGAGCACCTGTA 59.052 47.826 0.00 0.00 46.32 2.74
2105 2185 2.357881 TGTTGCCTGCGCTGAGAG 60.358 61.111 16.65 0.00 35.36 3.20
2113 2193 3.117171 GCGCTGAGAGGTGCAGTG 61.117 66.667 0.00 0.00 44.48 3.66
2125 2205 0.392193 GTGCAGTGGATCCTCTGTGG 60.392 60.000 33.44 17.13 39.09 4.17
2155 2235 3.181439 ACTGGATAGGCTTAAGGAATGGC 60.181 47.826 4.29 0.00 0.00 4.40
2199 2279 1.482182 TCAACATAGTGAGCTGCCGAT 59.518 47.619 0.00 0.00 0.00 4.18
2234 2314 4.442706 CACTTGTGTACCTGAAACTCAGT 58.557 43.478 3.15 0.00 42.80 3.41
2278 2862 3.307782 AGACCAAACACAGTAAACGTTCG 59.692 43.478 0.00 0.00 0.00 3.95
2366 2953 3.993920 AGCAACCTGCCAGTTAATTTTG 58.006 40.909 0.00 0.00 46.52 2.44
2399 2986 1.508088 GCAGATGCGGGGAAAACTG 59.492 57.895 0.00 0.00 0.00 3.16
2439 3026 4.122143 TGTTTGAAGCAGGTTTTCTTGG 57.878 40.909 0.00 0.00 0.00 3.61
2446 3033 0.597377 CAGGTTTTCTTGGCAACCGC 60.597 55.000 0.00 0.00 46.25 5.68
2495 3082 1.510480 GGTGTTGCCTGTGCTGAGAC 61.510 60.000 0.00 0.00 38.71 3.36
2524 3111 0.620556 ATCCTCGTTGGGACTGCAAT 59.379 50.000 0.00 0.00 38.30 3.56
2655 3245 0.326264 GGAGGTCAGCAGAACCACAT 59.674 55.000 5.16 0.00 29.15 3.21
2664 3254 1.610522 GCAGAACCACATCAAACAGCT 59.389 47.619 0.00 0.00 0.00 4.24
2669 3259 4.757149 AGAACCACATCAAACAGCTAGTTC 59.243 41.667 0.00 0.00 40.26 3.01
2687 3277 6.127535 GCTAGTTCATTGTGGTGGTACTAGTA 60.128 42.308 0.00 0.00 37.24 1.82
2688 3278 6.675413 AGTTCATTGTGGTGGTACTAGTAA 57.325 37.500 3.61 0.00 0.00 2.24
2703 3293 6.039493 GGTACTAGTAAAGCAGCAGATACTGA 59.961 42.308 3.61 0.03 40.25 3.41
2704 3294 6.531503 ACTAGTAAAGCAGCAGATACTGAA 57.468 37.500 12.57 0.00 40.25 3.02
2705 3295 6.568869 ACTAGTAAAGCAGCAGATACTGAAG 58.431 40.000 12.57 7.39 40.25 3.02
2706 3296 5.667539 AGTAAAGCAGCAGATACTGAAGA 57.332 39.130 2.81 0.00 40.25 2.87
2707 3297 6.042638 AGTAAAGCAGCAGATACTGAAGAA 57.957 37.500 2.81 0.00 40.25 2.52
2708 3298 6.105333 AGTAAAGCAGCAGATACTGAAGAAG 58.895 40.000 2.81 0.00 40.25 2.85
2709 3299 3.540314 AGCAGCAGATACTGAAGAAGG 57.460 47.619 2.81 0.00 40.25 3.46
2710 3300 2.836981 AGCAGCAGATACTGAAGAAGGT 59.163 45.455 2.81 0.00 40.25 3.50
2711 3301 3.262915 AGCAGCAGATACTGAAGAAGGTT 59.737 43.478 2.81 0.00 40.25 3.50
2712 3302 4.006319 GCAGCAGATACTGAAGAAGGTTT 58.994 43.478 2.81 0.00 40.25 3.27
2723 3313 6.941857 ACTGAAGAAGGTTTCCTAGAAGATC 58.058 40.000 0.00 0.00 31.13 2.75
2727 3317 3.528597 AGGTTTCCTAGAAGATCGCAC 57.471 47.619 0.00 0.00 28.47 5.34
2747 3337 2.161855 CTGAACATAGCAACCTGCCAA 58.838 47.619 0.00 0.00 46.52 4.52
2836 3426 1.200020 GCAGGTTTTCTTGACGATGGG 59.800 52.381 0.00 0.00 0.00 4.00
2861 3451 7.067981 GGGATGAAGCTAATGAATCTGAAACTT 59.932 37.037 0.00 0.00 0.00 2.66
2959 3549 2.368548 ACATATCCATGAAGGCGCAGTA 59.631 45.455 10.83 0.00 37.29 2.74
3022 3612 4.008074 AGCTGAAACTCGAGAAAATCCA 57.992 40.909 21.68 6.94 0.00 3.41
3027 3617 3.771577 AACTCGAGAAAATCCACCAGT 57.228 42.857 21.68 0.00 0.00 4.00
3028 3618 3.045601 ACTCGAGAAAATCCACCAGTG 57.954 47.619 21.68 0.00 0.00 3.66
3134 3724 2.512485 TGGCATTGAACACAGCAAAG 57.488 45.000 0.00 0.00 0.00 2.77
3195 3785 1.880027 GAAAACTGGCATCGAACACCT 59.120 47.619 0.00 0.00 0.00 4.00
3212 3802 3.187700 CACCTCGTACTGCCTGTTAATC 58.812 50.000 0.00 0.00 0.00 1.75
3265 3855 6.015282 AGAAAGCTTTCCTGGAGATGAAATT 58.985 36.000 30.83 8.54 37.92 1.82
3268 3858 6.319048 AGCTTTCCTGGAGATGAAATTAGA 57.681 37.500 0.00 0.00 30.67 2.10
3365 3955 0.463474 GGTGAAGCCAGCTGAGGATC 60.463 60.000 17.39 8.46 37.77 3.36
3372 3962 1.519246 CAGCTGAGGATCGCAGGAA 59.481 57.895 8.42 0.00 38.61 3.36
3382 3972 4.559153 AGGATCGCAGGAAAAACAAAATG 58.441 39.130 0.00 0.00 0.00 2.32
3389 3979 4.083855 GCAGGAAAAACAAAATGCCTAAGC 60.084 41.667 0.00 0.00 40.48 3.09
3398 3988 4.022849 ACAAAATGCCTAAGCTCTCAACAC 60.023 41.667 0.00 0.00 40.80 3.32
3432 4022 2.472695 ACATTGCAAGAGAACCGCTA 57.527 45.000 4.94 0.00 0.00 4.26
3484 4089 5.280215 CCCCTTGTCAGATAGGACCAATATC 60.280 48.000 0.00 0.00 36.97 1.63
3607 4212 3.055719 CAATGGGTGCGCCGAGTT 61.056 61.111 10.86 1.75 34.97 3.01
3617 4222 1.671845 TGCGCCGAGTTTAACAGTTTT 59.328 42.857 4.18 0.00 0.00 2.43
3680 4286 2.290577 GCCTGGAGTCTTCACCTGAAAT 60.291 50.000 0.00 0.00 33.07 2.17
3688 4294 7.622081 TGGAGTCTTCACCTGAAATATTAGGTA 59.378 37.037 9.20 0.00 45.26 3.08
3689 4295 7.927092 GGAGTCTTCACCTGAAATATTAGGTAC 59.073 40.741 9.20 5.18 45.26 3.34
3757 4364 1.202915 TGCTTTGCATCCACCAGAAGA 60.203 47.619 0.00 0.00 31.71 2.87
3764 4371 2.092753 GCATCCACCAGAAGATCCTTCA 60.093 50.000 9.10 0.00 0.00 3.02
3767 4374 2.303022 TCCACCAGAAGATCCTTCACAC 59.697 50.000 9.10 0.00 0.00 3.82
3797 4405 6.098838 TGCTACATTCATCTCTCTGTTATGGT 59.901 38.462 0.00 0.00 0.00 3.55
3801 4409 4.639135 TCATCTCTCTGTTATGGTGTCG 57.361 45.455 0.00 0.00 0.00 4.35
3807 4415 3.192001 TCTCTGTTATGGTGTCGTGGTAC 59.808 47.826 0.00 0.00 0.00 3.34
3847 4455 7.715265 TCTACTAAAAAGAGTGCAGAACTTG 57.285 36.000 0.00 0.00 40.07 3.16
3881 4489 7.167468 GCGTTCAGTTGTGATTGAACTAATTTT 59.833 33.333 13.47 0.00 45.25 1.82
3882 4490 9.019764 CGTTCAGTTGTGATTGAACTAATTTTT 57.980 29.630 13.47 0.00 45.25 1.94
3884 4492 8.351495 TCAGTTGTGATTGAACTAATTTTTGC 57.649 30.769 0.00 0.00 32.27 3.68
3885 4493 7.437862 TCAGTTGTGATTGAACTAATTTTTGCC 59.562 33.333 0.00 0.00 32.27 4.52
3886 4494 6.705825 AGTTGTGATTGAACTAATTTTTGCCC 59.294 34.615 0.00 0.00 31.72 5.36
3887 4495 6.418057 TGTGATTGAACTAATTTTTGCCCT 57.582 33.333 0.00 0.00 0.00 5.19
3888 4496 6.825610 TGTGATTGAACTAATTTTTGCCCTT 58.174 32.000 0.00 0.00 0.00 3.95
3889 4497 7.278875 TGTGATTGAACTAATTTTTGCCCTTT 58.721 30.769 0.00 0.00 0.00 3.11
3890 4498 7.226325 TGTGATTGAACTAATTTTTGCCCTTTG 59.774 33.333 0.00 0.00 0.00 2.77
3891 4499 7.440856 GTGATTGAACTAATTTTTGCCCTTTGA 59.559 33.333 0.00 0.00 0.00 2.69
3892 4500 7.989741 TGATTGAACTAATTTTTGCCCTTTGAA 59.010 29.630 0.00 0.00 0.00 2.69
3893 4501 7.784633 TTGAACTAATTTTTGCCCTTTGAAG 57.215 32.000 0.00 0.00 0.00 3.02
3894 4502 5.757808 TGAACTAATTTTTGCCCTTTGAAGC 59.242 36.000 0.00 0.00 0.00 3.86
3895 4503 4.306600 ACTAATTTTTGCCCTTTGAAGCG 58.693 39.130 0.00 0.00 0.00 4.68
3896 4504 2.908688 ATTTTTGCCCTTTGAAGCGT 57.091 40.000 0.00 0.00 0.00 5.07
3897 4505 2.682155 TTTTTGCCCTTTGAAGCGTT 57.318 40.000 0.00 0.00 0.00 4.84
3898 4506 1.933247 TTTTGCCCTTTGAAGCGTTG 58.067 45.000 0.00 0.00 0.00 4.10
3899 4507 0.820871 TTTGCCCTTTGAAGCGTTGT 59.179 45.000 0.00 0.00 0.00 3.32
3923 4531 6.150976 GTGAATTGGGATCTGTTGAACATGTA 59.849 38.462 0.00 0.00 0.00 2.29
3925 4533 3.609853 TGGGATCTGTTGAACATGTAGC 58.390 45.455 0.00 0.00 0.00 3.58
3968 4576 1.031571 AGTGGCACGGCATAACATGG 61.032 55.000 12.71 0.00 0.00 3.66
3970 4578 1.311651 TGGCACGGCATAACATGGTG 61.312 55.000 0.00 0.00 0.00 4.17
3986 4594 1.609239 GTGCTCCCACCATGATGGA 59.391 57.895 20.11 2.52 43.02 3.41
3993 4726 4.018960 GCTCCCACCATGATGGATTAGTAT 60.019 45.833 20.11 0.00 43.02 2.12
4023 4757 8.810652 TTAGTGGAAAATTAACAATGAACTGC 57.189 30.769 0.00 0.00 0.00 4.40
4028 4762 8.203485 TGGAAAATTAACAATGAACTGCTTCTT 58.797 29.630 0.00 0.00 0.00 2.52
4088 4822 1.272781 CAAGCAACTCGATCGGAGAC 58.727 55.000 16.41 1.63 46.23 3.36
4115 4857 2.313643 TGCCCGTCCCTCTATGGATATA 59.686 50.000 0.00 0.00 36.63 0.86
4117 4859 3.132467 GCCCGTCCCTCTATGGATATAAC 59.868 52.174 0.00 0.00 36.63 1.89
4123 4869 6.625300 CGTCCCTCTATGGATATAACGAAAGG 60.625 46.154 0.00 0.00 36.63 3.11
4126 4872 7.678598 TCCCTCTATGGATATAACGAAAGGATT 59.321 37.037 0.00 0.00 38.35 3.01
4165 4911 5.776173 AGAAAGAGTGGTATGGTAGATCG 57.224 43.478 0.00 0.00 0.00 3.69
4174 4920 3.746492 GGTATGGTAGATCGAATGCCAAC 59.254 47.826 13.42 12.11 32.54 3.77
4175 4921 3.558931 ATGGTAGATCGAATGCCAACA 57.441 42.857 13.42 0.00 32.54 3.33
4180 4926 4.873827 GGTAGATCGAATGCCAACACTTTA 59.126 41.667 0.00 0.00 0.00 1.85
4195 4941 6.966066 CCAACACTTTATTTGGCAAAACAAAG 59.034 34.615 29.67 29.67 42.91 2.77
4198 4944 5.964751 CACTTTATTTGGCAAAACAAAGTGC 59.035 36.000 37.35 0.00 43.07 4.40
4200 4946 5.731599 TTATTTGGCAAAACAAAGTGCAG 57.268 34.783 17.70 0.00 42.91 4.41
4202 4948 2.292103 TGGCAAAACAAAGTGCAGTC 57.708 45.000 0.00 0.00 42.74 3.51
4212 4958 9.206870 CAAAACAAAGTGCAGTCCATTATAATT 57.793 29.630 0.00 0.00 0.00 1.40
4269 5016 5.917462 TCTTGAGAAGAGTCATGTGTTTGA 58.083 37.500 0.00 0.00 32.71 2.69
4281 5028 7.810658 AGTCATGTGTTTGACATTCAGAATAC 58.189 34.615 7.28 0.00 43.20 1.89
4358 5120 2.432510 GCATGTACTACCTCTTCCTGCT 59.567 50.000 0.00 0.00 0.00 4.24
4416 5178 8.278729 TGATGAAGAAAATTTTGCACCTTTTT 57.721 26.923 8.47 0.00 0.00 1.94
4440 5202 3.749665 TTTTGAGGCAAACAATGGAGG 57.250 42.857 0.00 0.00 32.79 4.30
4441 5203 2.673775 TTGAGGCAAACAATGGAGGA 57.326 45.000 0.00 0.00 0.00 3.71
4442 5204 2.905415 TGAGGCAAACAATGGAGGAT 57.095 45.000 0.00 0.00 0.00 3.24
4443 5205 4.314522 TTGAGGCAAACAATGGAGGATA 57.685 40.909 0.00 0.00 0.00 2.59
4444 5206 4.314522 TGAGGCAAACAATGGAGGATAA 57.685 40.909 0.00 0.00 0.00 1.75
4445 5207 4.870636 TGAGGCAAACAATGGAGGATAAT 58.129 39.130 0.00 0.00 0.00 1.28
4446 5208 4.889409 TGAGGCAAACAATGGAGGATAATC 59.111 41.667 0.00 0.00 0.00 1.75
4447 5209 3.885297 AGGCAAACAATGGAGGATAATCG 59.115 43.478 0.00 0.00 0.00 3.34
4448 5210 3.550842 GGCAAACAATGGAGGATAATCGC 60.551 47.826 0.00 0.00 0.00 4.58
4449 5211 3.550842 GCAAACAATGGAGGATAATCGCC 60.551 47.826 0.00 0.00 0.00 5.54
4450 5212 2.568623 ACAATGGAGGATAATCGCCC 57.431 50.000 0.00 0.00 0.00 6.13
4451 5213 1.774254 ACAATGGAGGATAATCGCCCA 59.226 47.619 0.00 0.00 0.00 5.36
4452 5214 2.154462 CAATGGAGGATAATCGCCCAC 58.846 52.381 0.00 0.00 0.00 4.61
4453 5215 0.693049 ATGGAGGATAATCGCCCACC 59.307 55.000 0.00 0.00 34.33 4.61
4454 5216 0.399949 TGGAGGATAATCGCCCACCT 60.400 55.000 0.00 0.00 34.75 4.00
4455 5217 0.035458 GGAGGATAATCGCCCACCTG 59.965 60.000 0.00 0.00 31.55 4.00
4456 5218 1.048601 GAGGATAATCGCCCACCTGA 58.951 55.000 0.00 0.00 0.00 3.86
4457 5219 1.416401 GAGGATAATCGCCCACCTGAA 59.584 52.381 0.00 0.00 0.00 3.02
4458 5220 1.141053 AGGATAATCGCCCACCTGAAC 59.859 52.381 0.00 0.00 0.00 3.18
4459 5221 1.217882 GATAATCGCCCACCTGAACG 58.782 55.000 0.00 0.00 0.00 3.95
4460 5222 0.539986 ATAATCGCCCACCTGAACGT 59.460 50.000 0.00 0.00 0.00 3.99
4461 5223 0.322322 TAATCGCCCACCTGAACGTT 59.678 50.000 0.00 0.00 0.00 3.99
4462 5224 0.536460 AATCGCCCACCTGAACGTTT 60.536 50.000 0.46 0.00 0.00 3.60
4463 5225 0.953960 ATCGCCCACCTGAACGTTTC 60.954 55.000 0.46 0.00 0.00 2.78
4464 5226 1.597027 CGCCCACCTGAACGTTTCT 60.597 57.895 0.46 0.00 0.00 2.52
4465 5227 0.320073 CGCCCACCTGAACGTTTCTA 60.320 55.000 0.46 0.00 0.00 2.10
4466 5228 1.674817 CGCCCACCTGAACGTTTCTAT 60.675 52.381 0.46 0.00 0.00 1.98
4467 5229 2.433436 GCCCACCTGAACGTTTCTATT 58.567 47.619 0.46 0.00 0.00 1.73
4468 5230 2.161609 GCCCACCTGAACGTTTCTATTG 59.838 50.000 0.46 0.00 0.00 1.90
4469 5231 2.161609 CCCACCTGAACGTTTCTATTGC 59.838 50.000 0.46 0.00 0.00 3.56
4470 5232 3.074412 CCACCTGAACGTTTCTATTGCT 58.926 45.455 0.46 0.00 0.00 3.91
4471 5233 3.125316 CCACCTGAACGTTTCTATTGCTC 59.875 47.826 0.46 0.00 0.00 4.26
4472 5234 3.745975 CACCTGAACGTTTCTATTGCTCA 59.254 43.478 0.46 0.00 0.00 4.26
4473 5235 4.393062 CACCTGAACGTTTCTATTGCTCAT 59.607 41.667 0.46 0.00 0.00 2.90
4474 5236 5.580691 CACCTGAACGTTTCTATTGCTCATA 59.419 40.000 0.46 0.00 0.00 2.15
4475 5237 6.258727 CACCTGAACGTTTCTATTGCTCATAT 59.741 38.462 0.46 0.00 0.00 1.78
4476 5238 6.480320 ACCTGAACGTTTCTATTGCTCATATC 59.520 38.462 0.46 0.00 0.00 1.63
4477 5239 6.479990 CCTGAACGTTTCTATTGCTCATATCA 59.520 38.462 0.46 0.00 0.00 2.15
4478 5240 7.307042 CCTGAACGTTTCTATTGCTCATATCAG 60.307 40.741 0.46 0.00 0.00 2.90
4479 5241 6.479990 TGAACGTTTCTATTGCTCATATCAGG 59.520 38.462 0.46 0.00 0.00 3.86
4480 5242 5.300752 ACGTTTCTATTGCTCATATCAGGG 58.699 41.667 0.00 0.00 0.00 4.45
4481 5243 4.692625 CGTTTCTATTGCTCATATCAGGGG 59.307 45.833 0.00 0.00 0.00 4.79
4482 5244 4.916041 TTCTATTGCTCATATCAGGGGG 57.084 45.455 0.00 0.00 0.00 5.40
4483 5245 4.146245 TCTATTGCTCATATCAGGGGGA 57.854 45.455 0.00 0.00 0.00 4.81
4484 5246 4.099633 TCTATTGCTCATATCAGGGGGAG 58.900 47.826 0.00 0.00 0.00 4.30
4485 5247 2.494888 TTGCTCATATCAGGGGGAGA 57.505 50.000 0.00 0.00 0.00 3.71
4486 5248 2.021262 TGCTCATATCAGGGGGAGAG 57.979 55.000 0.00 0.00 0.00 3.20
4487 5249 1.505098 TGCTCATATCAGGGGGAGAGA 59.495 52.381 0.00 0.00 0.00 3.10
4488 5250 2.113233 TGCTCATATCAGGGGGAGAGAT 59.887 50.000 0.00 0.00 0.00 2.75
4489 5251 2.500910 GCTCATATCAGGGGGAGAGATG 59.499 54.545 0.00 0.00 36.36 2.90
4490 5252 3.820852 GCTCATATCAGGGGGAGAGATGA 60.821 52.174 0.00 0.00 40.32 2.92
4491 5253 4.622815 CTCATATCAGGGGGAGAGATGAT 58.377 47.826 0.00 0.00 41.32 2.45
4492 5254 5.031495 CTCATATCAGGGGGAGAGATGATT 58.969 45.833 0.00 0.00 41.32 2.57
4493 5255 6.171026 TCATATCAGGGGGAGAGATGATTA 57.829 41.667 0.00 0.00 38.42 1.75
4494 5256 5.960811 TCATATCAGGGGGAGAGATGATTAC 59.039 44.000 0.00 0.00 38.42 1.89
4495 5257 3.706389 TCAGGGGGAGAGATGATTACA 57.294 47.619 0.00 0.00 0.00 2.41
4496 5258 3.581101 TCAGGGGGAGAGATGATTACAG 58.419 50.000 0.00 0.00 0.00 2.74
4497 5259 2.038295 CAGGGGGAGAGATGATTACAGC 59.962 54.545 0.00 0.00 0.00 4.40
4498 5260 2.050144 GGGGGAGAGATGATTACAGCA 58.950 52.381 0.00 0.00 34.60 4.41
4499 5261 2.439507 GGGGGAGAGATGATTACAGCAA 59.560 50.000 0.00 0.00 34.60 3.91
4500 5262 3.471680 GGGGAGAGATGATTACAGCAAC 58.528 50.000 0.00 0.00 34.60 4.17
4501 5263 3.118261 GGGGAGAGATGATTACAGCAACA 60.118 47.826 0.00 0.00 34.60 3.33
4502 5264 4.445448 GGGGAGAGATGATTACAGCAACAT 60.445 45.833 0.00 0.00 34.60 2.71
4503 5265 5.221722 GGGGAGAGATGATTACAGCAACATA 60.222 44.000 0.00 0.00 34.60 2.29
4504 5266 5.931146 GGGAGAGATGATTACAGCAACATAG 59.069 44.000 0.00 0.00 34.60 2.23
4505 5267 6.239430 GGGAGAGATGATTACAGCAACATAGA 60.239 42.308 0.00 0.00 34.60 1.98
4506 5268 6.644592 GGAGAGATGATTACAGCAACATAGAC 59.355 42.308 0.00 0.00 34.60 2.59
4507 5269 7.358770 AGAGATGATTACAGCAACATAGACT 57.641 36.000 0.00 0.00 34.60 3.24
4508 5270 7.432869 AGAGATGATTACAGCAACATAGACTC 58.567 38.462 0.00 0.00 34.60 3.36
4509 5271 6.212235 AGATGATTACAGCAACATAGACTCG 58.788 40.000 0.00 0.00 34.60 4.18
4510 5272 4.112634 TGATTACAGCAACATAGACTCGC 58.887 43.478 0.00 0.00 0.00 5.03
4511 5273 3.586100 TTACAGCAACATAGACTCGCA 57.414 42.857 0.00 0.00 0.00 5.10
4512 5274 1.714794 ACAGCAACATAGACTCGCAC 58.285 50.000 0.00 0.00 0.00 5.34
4513 5275 1.000843 ACAGCAACATAGACTCGCACA 59.999 47.619 0.00 0.00 0.00 4.57
4514 5276 2.274437 CAGCAACATAGACTCGCACAT 58.726 47.619 0.00 0.00 0.00 3.21
4515 5277 3.119137 ACAGCAACATAGACTCGCACATA 60.119 43.478 0.00 0.00 0.00 2.29
4516 5278 3.488678 CAGCAACATAGACTCGCACATAG 59.511 47.826 0.00 0.00 0.00 2.23
4517 5279 3.381590 AGCAACATAGACTCGCACATAGA 59.618 43.478 0.00 0.00 0.00 1.98
4518 5280 3.733224 GCAACATAGACTCGCACATAGAG 59.267 47.826 0.00 0.00 41.27 2.43
4536 5298 8.256611 ACATAGAGTGAATTTATGTGTGACAC 57.743 34.615 9.14 9.14 36.83 3.67
4537 5299 5.845985 AGAGTGAATTTATGTGTGACACG 57.154 39.130 11.51 0.00 37.14 4.49
4538 5300 5.297547 AGAGTGAATTTATGTGTGACACGT 58.702 37.500 15.45 15.45 37.14 4.49
4539 5301 5.177511 AGAGTGAATTTATGTGTGACACGTG 59.822 40.000 19.96 15.48 37.14 4.49
4540 5302 5.053811 AGTGAATTTATGTGTGACACGTGA 58.946 37.500 25.01 9.54 37.14 4.35
4541 5303 5.177511 AGTGAATTTATGTGTGACACGTGAG 59.822 40.000 25.01 0.00 37.14 3.51
4542 5304 5.176774 GTGAATTTATGTGTGACACGTGAGA 59.823 40.000 25.01 4.68 37.14 3.27
4543 5305 5.755861 TGAATTTATGTGTGACACGTGAGAA 59.244 36.000 25.01 11.96 37.14 2.87
4544 5306 5.845985 ATTTATGTGTGACACGTGAGAAG 57.154 39.130 25.01 0.00 37.14 2.85
4545 5307 1.502231 ATGTGTGACACGTGAGAAGC 58.498 50.000 25.01 9.68 37.14 3.86
4546 5308 0.459899 TGTGTGACACGTGAGAAGCT 59.540 50.000 25.01 0.00 37.14 3.74
4547 5309 1.134818 TGTGTGACACGTGAGAAGCTT 60.135 47.619 25.01 0.00 37.14 3.74
4548 5310 1.933853 GTGTGACACGTGAGAAGCTTT 59.066 47.619 25.01 0.00 0.00 3.51
4549 5311 3.120792 GTGTGACACGTGAGAAGCTTTA 58.879 45.455 25.01 0.00 0.00 1.85
4550 5312 3.182572 GTGTGACACGTGAGAAGCTTTAG 59.817 47.826 25.01 0.00 0.00 1.85
4551 5313 3.067601 TGTGACACGTGAGAAGCTTTAGA 59.932 43.478 25.01 0.00 0.00 2.10
4552 5314 4.238514 GTGACACGTGAGAAGCTTTAGAT 58.761 43.478 25.01 0.00 0.00 1.98
4553 5315 4.686554 GTGACACGTGAGAAGCTTTAGATT 59.313 41.667 25.01 0.00 0.00 2.40
4554 5316 4.686091 TGACACGTGAGAAGCTTTAGATTG 59.314 41.667 25.01 0.00 0.00 2.67
4555 5317 4.632153 ACACGTGAGAAGCTTTAGATTGT 58.368 39.130 25.01 0.00 0.00 2.71
4556 5318 5.057149 ACACGTGAGAAGCTTTAGATTGTT 58.943 37.500 25.01 0.00 0.00 2.83
4557 5319 5.177696 ACACGTGAGAAGCTTTAGATTGTTC 59.822 40.000 25.01 0.00 0.00 3.18
4558 5320 5.406780 CACGTGAGAAGCTTTAGATTGTTCT 59.593 40.000 10.90 0.00 35.90 3.01
4559 5321 5.992217 ACGTGAGAAGCTTTAGATTGTTCTT 59.008 36.000 0.00 0.00 33.17 2.52
4560 5322 6.483640 ACGTGAGAAGCTTTAGATTGTTCTTT 59.516 34.615 0.00 0.00 33.17 2.52
4561 5323 7.012358 CGTGAGAAGCTTTAGATTGTTCTTTC 58.988 38.462 0.00 0.00 33.17 2.62
4562 5324 7.301789 GTGAGAAGCTTTAGATTGTTCTTTCC 58.698 38.462 0.00 0.00 33.17 3.13
4563 5325 7.174080 GTGAGAAGCTTTAGATTGTTCTTTCCT 59.826 37.037 0.00 0.00 33.17 3.36
4564 5326 7.721399 TGAGAAGCTTTAGATTGTTCTTTCCTT 59.279 33.333 0.00 0.00 33.17 3.36
4565 5327 9.220767 GAGAAGCTTTAGATTGTTCTTTCCTTA 57.779 33.333 0.00 0.00 33.17 2.69
4566 5328 9.004717 AGAAGCTTTAGATTGTTCTTTCCTTAC 57.995 33.333 0.00 0.00 33.17 2.34
4567 5329 7.365840 AGCTTTAGATTGTTCTTTCCTTACG 57.634 36.000 0.00 0.00 33.17 3.18
4568 5330 7.159372 AGCTTTAGATTGTTCTTTCCTTACGA 58.841 34.615 0.00 0.00 33.17 3.43
4569 5331 7.660208 AGCTTTAGATTGTTCTTTCCTTACGAA 59.340 33.333 0.00 0.00 33.17 3.85
4570 5332 8.287503 GCTTTAGATTGTTCTTTCCTTACGAAA 58.712 33.333 0.00 0.00 38.16 3.46
4574 5336 7.649057 AGATTGTTCTTTCCTTACGAAAAAGG 58.351 34.615 8.92 8.92 46.35 3.11
4575 5337 5.177725 TGTTCTTTCCTTACGAAAAAGGC 57.822 39.130 9.99 0.00 44.89 4.35
4576 5338 4.885325 TGTTCTTTCCTTACGAAAAAGGCT 59.115 37.500 9.99 0.00 44.89 4.58
4577 5339 5.358725 TGTTCTTTCCTTACGAAAAAGGCTT 59.641 36.000 0.00 0.00 44.89 4.35
4578 5340 6.127563 TGTTCTTTCCTTACGAAAAAGGCTTT 60.128 34.615 6.68 6.68 44.89 3.51
4579 5341 6.068473 TCTTTCCTTACGAAAAAGGCTTTC 57.932 37.500 13.76 0.41 44.89 2.62
4580 5342 5.591067 TCTTTCCTTACGAAAAAGGCTTTCA 59.409 36.000 13.76 0.00 44.89 2.69
4581 5343 4.823790 TCCTTACGAAAAAGGCTTTCAC 57.176 40.909 13.76 9.32 44.89 3.18
4582 5344 3.566742 TCCTTACGAAAAAGGCTTTCACC 59.433 43.478 13.76 4.71 44.89 4.02
4583 5345 3.305131 CCTTACGAAAAAGGCTTTCACCC 60.305 47.826 13.76 2.28 39.69 4.61
4584 5346 1.037493 ACGAAAAAGGCTTTCACCCC 58.963 50.000 13.76 0.57 0.00 4.95
4585 5347 0.039527 CGAAAAAGGCTTTCACCCCG 60.040 55.000 13.76 8.65 0.00 5.73
4586 5348 1.037493 GAAAAAGGCTTTCACCCCGT 58.963 50.000 13.76 0.00 0.00 5.28
4587 5349 1.411246 GAAAAAGGCTTTCACCCCGTT 59.589 47.619 13.76 1.51 0.00 4.44
4588 5350 1.491668 AAAAGGCTTTCACCCCGTTT 58.508 45.000 13.76 0.00 0.00 3.60
4589 5351 1.491668 AAAGGCTTTCACCCCGTTTT 58.508 45.000 6.68 0.00 0.00 2.43
4590 5352 2.368311 AAGGCTTTCACCCCGTTTTA 57.632 45.000 0.00 0.00 0.00 1.52
4591 5353 2.597578 AGGCTTTCACCCCGTTTTAT 57.402 45.000 0.00 0.00 0.00 1.40
4592 5354 3.724732 AGGCTTTCACCCCGTTTTATA 57.275 42.857 0.00 0.00 0.00 0.98
4593 5355 4.245251 AGGCTTTCACCCCGTTTTATAT 57.755 40.909 0.00 0.00 0.00 0.86
4594 5356 5.376756 AGGCTTTCACCCCGTTTTATATA 57.623 39.130 0.00 0.00 0.00 0.86
4595 5357 5.757988 AGGCTTTCACCCCGTTTTATATAA 58.242 37.500 0.00 0.00 0.00 0.98
4596 5358 6.189133 AGGCTTTCACCCCGTTTTATATAAA 58.811 36.000 3.71 3.71 0.00 1.40
4597 5359 6.320418 AGGCTTTCACCCCGTTTTATATAAAG 59.680 38.462 7.91 0.00 0.00 1.85
4598 5360 5.975344 GCTTTCACCCCGTTTTATATAAAGC 59.025 40.000 11.00 11.00 39.39 3.51
4599 5361 6.404954 GCTTTCACCCCGTTTTATATAAAGCA 60.405 38.462 18.52 0.15 43.44 3.91
4600 5362 7.463961 TTTCACCCCGTTTTATATAAAGCAA 57.536 32.000 18.52 5.04 0.00 3.91
4601 5363 7.648039 TTCACCCCGTTTTATATAAAGCAAT 57.352 32.000 18.52 2.16 0.00 3.56
4602 5364 7.033530 TCACCCCGTTTTATATAAAGCAATG 57.966 36.000 18.52 11.65 0.00 2.82
4603 5365 6.829298 TCACCCCGTTTTATATAAAGCAATGA 59.171 34.615 18.52 13.20 0.00 2.57
4604 5366 7.504238 TCACCCCGTTTTATATAAAGCAATGAT 59.496 33.333 18.52 1.60 0.00 2.45
4605 5367 7.807907 CACCCCGTTTTATATAAAGCAATGATC 59.192 37.037 18.52 0.00 0.00 2.92
4606 5368 7.504238 ACCCCGTTTTATATAAAGCAATGATCA 59.496 33.333 18.52 0.00 0.00 2.92
4607 5369 8.356657 CCCCGTTTTATATAAAGCAATGATCAA 58.643 33.333 18.52 0.00 0.00 2.57
4608 5370 9.180678 CCCGTTTTATATAAAGCAATGATCAAC 57.819 33.333 18.52 6.21 0.00 3.18
4609 5371 9.729023 CCGTTTTATATAAAGCAATGATCAACA 57.271 29.630 18.52 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.270352 GGTTTGGACCATCACACTGA 57.730 50.000 0.00 0.00 45.77 3.41
87 88 1.753956 GCACCAAAACGCAGTACAAG 58.246 50.000 0.00 0.00 45.00 3.16
96 97 2.478547 AAAGTAACCGCACCAAAACG 57.521 45.000 0.00 0.00 0.00 3.60
105 106 1.532437 ACGTTGCCTAAAAGTAACCGC 59.468 47.619 0.00 0.00 0.00 5.68
115 116 2.147958 GGACACAATGACGTTGCCTAA 58.852 47.619 7.33 0.00 41.69 2.69
116 117 1.609580 GGGACACAATGACGTTGCCTA 60.610 52.381 7.33 0.00 41.69 3.93
132 133 3.728373 AATCCGGCCACCAGGGAC 61.728 66.667 2.24 0.00 43.65 4.46
155 156 3.071892 CCCTACCAACACCAAACTCTACA 59.928 47.826 0.00 0.00 0.00 2.74
162 163 2.488347 GCTCTTCCCTACCAACACCAAA 60.488 50.000 0.00 0.00 0.00 3.28
194 195 1.303561 TCTCACATTGCCCACTGCC 60.304 57.895 0.00 0.00 40.16 4.85
208 209 6.407865 CCTGGAGAATTTAGCTCAATCTCTCA 60.408 42.308 21.33 15.01 34.07 3.27
212 213 4.723789 TCCCTGGAGAATTTAGCTCAATCT 59.276 41.667 0.00 0.00 34.07 2.40
222 223 4.141158 ACAACTGACTTCCCTGGAGAATTT 60.141 41.667 0.00 0.00 0.00 1.82
225 226 2.104792 CACAACTGACTTCCCTGGAGAA 59.895 50.000 0.00 0.00 0.00 2.87
228 229 1.140852 CACACAACTGACTTCCCTGGA 59.859 52.381 0.00 0.00 0.00 3.86
231 232 0.546122 TGCACACAACTGACTTCCCT 59.454 50.000 0.00 0.00 0.00 4.20
234 235 3.548818 GGTTGATGCACACAACTGACTTC 60.549 47.826 26.43 13.00 44.50 3.01
245 246 4.020307 TCTCTGATACAAGGTTGATGCACA 60.020 41.667 0.00 0.00 0.00 4.57
246 247 4.331168 GTCTCTGATACAAGGTTGATGCAC 59.669 45.833 0.00 0.00 0.00 4.57
254 255 3.702045 GCTAGGTGTCTCTGATACAAGGT 59.298 47.826 0.00 0.00 0.00 3.50
264 265 3.524346 GCTAGGGCTAGGTGTCTCT 57.476 57.895 0.00 0.00 33.87 3.10
289 290 0.988832 ACCCAAATCCGCTTCTACCA 59.011 50.000 0.00 0.00 0.00 3.25
301 302 2.965147 CAACCACCTTCTCAACCCAAAT 59.035 45.455 0.00 0.00 0.00 2.32
323 324 2.025226 ACTATCGAAGGTGAGGAGTGGA 60.025 50.000 0.00 0.00 0.00 4.02
334 335 4.308899 CCTTGGACAGTACTATCGAAGG 57.691 50.000 24.84 24.84 42.22 3.46
364 365 3.889538 CAGAAACCATCATGGCTCATCAT 59.110 43.478 2.52 0.00 42.67 2.45
375 376 0.250684 TTGAGCGCCAGAAACCATCA 60.251 50.000 2.29 0.00 0.00 3.07
388 389 0.387202 ATCCGGAGTCATCTTGAGCG 59.613 55.000 11.34 0.00 0.00 5.03
396 397 2.106511 CCCCATGTTTATCCGGAGTCAT 59.893 50.000 11.34 8.82 0.00 3.06
408 409 0.255890 CCATCTCCGACCCCATGTTT 59.744 55.000 0.00 0.00 0.00 2.83
431 432 0.835971 TCTCAGTAAGGCCTGGTGCA 60.836 55.000 5.69 0.00 43.89 4.57
444 445 1.000283 CTGCGGTTCAAGTCTCTCAGT 60.000 52.381 0.00 0.00 0.00 3.41
488 489 6.200097 GGAAGAGCTTGTTCTCGAGATATTTC 59.800 42.308 17.44 9.58 38.12 2.17
544 545 1.741145 GACTCGTGAGAAGAGGGAGAC 59.259 57.143 3.44 0.00 41.32 3.36
557 558 2.158449 GCAATGGACTTGAAGACTCGTG 59.842 50.000 0.00 0.00 36.97 4.35
560 561 2.417719 ACGCAATGGACTTGAAGACTC 58.582 47.619 0.00 0.00 36.97 3.36
576 577 1.069296 GTTTCTTGCTGCATGTACGCA 60.069 47.619 14.21 0.00 40.32 5.24
622 626 2.622470 ACATATATGCGCCAACAATGCA 59.378 40.909 12.79 0.00 43.67 3.96
625 629 4.009675 CCCTACATATATGCGCCAACAAT 58.990 43.478 12.79 0.00 0.00 2.71
630 634 2.635427 TGTTCCCTACATATATGCGCCA 59.365 45.455 12.79 0.00 0.00 5.69
631 635 3.056107 TCTGTTCCCTACATATATGCGCC 60.056 47.826 12.79 0.00 35.85 6.53
632 636 4.188247 TCTGTTCCCTACATATATGCGC 57.812 45.455 12.79 0.00 35.85 6.09
633 637 7.772166 TCTTATCTGTTCCCTACATATATGCG 58.228 38.462 12.79 4.32 35.85 4.73
634 638 9.539825 CATCTTATCTGTTCCCTACATATATGC 57.460 37.037 12.79 0.00 35.85 3.14
637 641 8.972127 GCTCATCTTATCTGTTCCCTACATATA 58.028 37.037 0.00 0.00 35.85 0.86
638 642 7.455953 TGCTCATCTTATCTGTTCCCTACATAT 59.544 37.037 0.00 0.00 35.85 1.78
639 643 6.782494 TGCTCATCTTATCTGTTCCCTACATA 59.218 38.462 0.00 0.00 35.85 2.29
640 644 5.604231 TGCTCATCTTATCTGTTCCCTACAT 59.396 40.000 0.00 0.00 35.85 2.29
641 645 4.962362 TGCTCATCTTATCTGTTCCCTACA 59.038 41.667 0.00 0.00 34.95 2.74
642 646 5.163405 TGTGCTCATCTTATCTGTTCCCTAC 60.163 44.000 0.00 0.00 0.00 3.18
643 647 4.962362 TGTGCTCATCTTATCTGTTCCCTA 59.038 41.667 0.00 0.00 0.00 3.53
644 648 3.776969 TGTGCTCATCTTATCTGTTCCCT 59.223 43.478 0.00 0.00 0.00 4.20
645 649 4.125703 CTGTGCTCATCTTATCTGTTCCC 58.874 47.826 0.00 0.00 0.00 3.97
646 650 3.559242 GCTGTGCTCATCTTATCTGTTCC 59.441 47.826 0.00 0.00 0.00 3.62
647 651 3.559242 GGCTGTGCTCATCTTATCTGTTC 59.441 47.826 0.00 0.00 0.00 3.18
648 652 3.199508 AGGCTGTGCTCATCTTATCTGTT 59.800 43.478 0.00 0.00 0.00 3.16
649 653 2.770802 AGGCTGTGCTCATCTTATCTGT 59.229 45.455 0.00 0.00 0.00 3.41
650 654 3.391965 GAGGCTGTGCTCATCTTATCTG 58.608 50.000 0.00 0.00 0.00 2.90
651 655 2.368221 GGAGGCTGTGCTCATCTTATCT 59.632 50.000 0.00 0.00 0.00 1.98
652 656 2.103771 TGGAGGCTGTGCTCATCTTATC 59.896 50.000 0.00 0.00 0.00 1.75
653 657 2.121948 TGGAGGCTGTGCTCATCTTAT 58.878 47.619 0.00 0.00 0.00 1.73
654 658 1.571955 TGGAGGCTGTGCTCATCTTA 58.428 50.000 0.00 0.00 0.00 2.10
655 659 0.694771 TTGGAGGCTGTGCTCATCTT 59.305 50.000 0.00 0.00 0.00 2.40
656 660 0.694771 TTTGGAGGCTGTGCTCATCT 59.305 50.000 0.00 0.00 0.00 2.90
657 661 1.200948 GTTTTGGAGGCTGTGCTCATC 59.799 52.381 0.00 0.00 0.00 2.92
658 662 1.251251 GTTTTGGAGGCTGTGCTCAT 58.749 50.000 0.00 0.00 0.00 2.90
659 663 0.823356 GGTTTTGGAGGCTGTGCTCA 60.823 55.000 0.00 0.00 0.00 4.26
660 664 1.856265 CGGTTTTGGAGGCTGTGCTC 61.856 60.000 0.00 0.00 0.00 4.26
661 665 1.898574 CGGTTTTGGAGGCTGTGCT 60.899 57.895 0.00 0.00 0.00 4.40
662 666 2.193536 ACGGTTTTGGAGGCTGTGC 61.194 57.895 0.00 0.00 0.00 4.57
663 667 1.101049 ACACGGTTTTGGAGGCTGTG 61.101 55.000 0.00 0.00 43.11 3.66
731 735 7.893658 AGAGATTACGGAAGAGTTACTCAAAA 58.106 34.615 15.23 0.20 32.06 2.44
733 737 7.039923 ACAAGAGATTACGGAAGAGTTACTCAA 60.040 37.037 15.23 0.00 32.06 3.02
735 739 6.854778 ACAAGAGATTACGGAAGAGTTACTC 58.145 40.000 3.85 3.85 0.00 2.59
736 740 6.837471 ACAAGAGATTACGGAAGAGTTACT 57.163 37.500 0.00 0.00 0.00 2.24
737 741 8.392124 GTAACAAGAGATTACGGAAGAGTTAC 57.608 38.462 0.00 0.00 33.43 2.50
763 776 1.162698 GGGCCTAGTTTCCGTTTGTC 58.837 55.000 0.84 0.00 0.00 3.18
839 852 2.216940 GCTTTTTCGTTTTGGCGTTACC 59.783 45.455 0.00 0.00 39.84 2.85
1144 1197 1.980772 CCCTTGGGCCTGCAAGAAG 60.981 63.158 19.89 9.43 34.07 2.85
1166 1219 1.602327 AACGAGAAGGGGTACGAGCC 61.602 60.000 0.00 0.00 34.31 4.70
1214 1267 8.900781 ACAGAACAGATAATGGAAATTCATGAG 58.099 33.333 0.00 0.00 0.00 2.90
1215 1268 8.812513 ACAGAACAGATAATGGAAATTCATGA 57.187 30.769 0.00 0.00 0.00 3.07
1216 1269 9.865321 AAACAGAACAGATAATGGAAATTCATG 57.135 29.630 0.00 0.00 0.00 3.07
1219 1272 8.450964 TCGAAACAGAACAGATAATGGAAATTC 58.549 33.333 0.00 0.00 0.00 2.17
1220 1273 8.237267 GTCGAAACAGAACAGATAATGGAAATT 58.763 33.333 0.00 0.00 0.00 1.82
1222 1280 6.128661 CGTCGAAACAGAACAGATAATGGAAA 60.129 38.462 0.00 0.00 0.00 3.13
1225 1283 4.625742 ACGTCGAAACAGAACAGATAATGG 59.374 41.667 0.00 0.00 0.00 3.16
1230 1289 5.526115 TCTAAACGTCGAAACAGAACAGAT 58.474 37.500 0.00 0.00 0.00 2.90
1242 1301 4.400845 CGTTTCAGAGATCTAAACGTCGA 58.599 43.478 24.20 2.25 46.24 4.20
1247 1309 4.923871 TGAGCACGTTTCAGAGATCTAAAC 59.076 41.667 8.85 8.85 0.00 2.01
1324 1386 2.174360 GGGGACTCGTACTGGTAACTT 58.826 52.381 0.00 0.00 37.61 2.66
1364 1426 0.904865 TCGACAGCAGGAGGGTCAAT 60.905 55.000 0.00 0.00 0.00 2.57
1510 1575 1.214923 TGGATCCCAGCATGCACAATA 59.785 47.619 21.98 1.00 31.97 1.90
1641 1712 2.763448 CCACTCGGAAGGAAATCTCTCT 59.237 50.000 0.00 0.00 0.00 3.10
1659 1730 0.465460 TTCAACAGTGCTCCCACCAC 60.465 55.000 0.00 0.00 43.09 4.16
1767 1847 0.737715 CGTACTTCTCTGCACAGGCC 60.738 60.000 0.00 0.00 40.13 5.19
1891 1971 4.892345 TCAGCTTGAGTCTCAGCTATACAT 59.108 41.667 19.80 2.68 32.43 2.29
1941 2021 1.070758 ACAGACGATCCACTGCACTTT 59.929 47.619 11.97 0.00 37.61 2.66
1959 2039 1.278985 CTATCCAGTTGCAGTCCCACA 59.721 52.381 0.00 0.00 0.00 4.17
2037 2117 5.335583 GCTATACAGGTGCTCTCACTATCTG 60.336 48.000 0.00 0.00 42.72 2.90
2038 2118 4.764823 GCTATACAGGTGCTCTCACTATCT 59.235 45.833 0.00 0.00 42.72 1.98
2057 2137 6.238621 CGACTATCAGTCTGAGTTTCAGCTAT 60.239 42.308 8.82 0.00 43.95 2.97
2105 2185 0.392193 CACAGAGGATCCACTGCACC 60.392 60.000 31.87 5.88 38.01 5.01
2113 2193 1.267574 TGCAGTCCCACAGAGGATCC 61.268 60.000 2.48 2.48 41.22 3.36
2125 2205 0.543749 AGCCTATCCAGTTGCAGTCC 59.456 55.000 0.00 0.00 0.00 3.85
2155 2235 2.488355 CCTTCATGGCTGCGCTTG 59.512 61.111 9.73 2.28 0.00 4.01
2178 2258 1.134995 TCGGCAGCTCACTATGTTGAG 60.135 52.381 0.00 1.83 45.15 3.02
2180 2260 1.596260 CATCGGCAGCTCACTATGTTG 59.404 52.381 0.00 0.00 0.00 3.33
2185 2265 1.889170 CTATCCATCGGCAGCTCACTA 59.111 52.381 0.00 0.00 0.00 2.74
2219 2299 4.758674 GGGGTTTAACTGAGTTTCAGGTAC 59.241 45.833 1.97 0.58 45.51 3.34
2263 2847 5.294060 ACAATTAACCGAACGTTTACTGTGT 59.706 36.000 0.46 0.00 35.79 3.72
2278 2862 7.148356 GCTAAACTAGTACCACCACAATTAACC 60.148 40.741 0.00 0.00 0.00 2.85
2366 2953 3.462021 CATCTGCTAGGCCTTTACTGTC 58.538 50.000 12.58 0.00 0.00 3.51
2439 3026 1.084370 AGTAGCTTCATCGCGGTTGC 61.084 55.000 6.13 3.08 37.91 4.17
2446 3033 5.406780 ACTTTCAGTTTGAGTAGCTTCATCG 59.593 40.000 0.00 0.00 0.00 3.84
2472 3059 3.964875 GCACAGGCAACACCACCG 61.965 66.667 0.00 0.00 43.14 4.94
2495 3082 1.079819 AACGAGGATCCACTGCACG 60.080 57.895 15.82 11.43 0.00 5.34
2524 3111 6.488769 TTTCTATTCCGTAAGCCTATCCAA 57.511 37.500 0.00 0.00 0.00 3.53
2655 3245 4.275689 CACCACAATGAACTAGCTGTTTGA 59.724 41.667 0.00 0.00 39.30 2.69
2664 3254 7.779754 TTACTAGTACCACCACAATGAACTA 57.220 36.000 0.91 0.00 0.00 2.24
2669 3259 5.242434 TGCTTTACTAGTACCACCACAATG 58.758 41.667 0.91 0.00 0.00 2.82
2687 3277 4.260170 CCTTCTTCAGTATCTGCTGCTTT 58.740 43.478 0.00 0.00 36.49 3.51
2688 3278 3.262915 ACCTTCTTCAGTATCTGCTGCTT 59.737 43.478 0.00 0.00 36.49 3.91
2703 3293 4.223032 TGCGATCTTCTAGGAAACCTTCTT 59.777 41.667 0.00 0.00 34.61 2.52
2704 3294 3.769844 TGCGATCTTCTAGGAAACCTTCT 59.230 43.478 0.00 0.00 34.61 2.85
2705 3295 3.866327 GTGCGATCTTCTAGGAAACCTTC 59.134 47.826 0.00 0.00 34.61 3.46
2706 3296 3.515901 AGTGCGATCTTCTAGGAAACCTT 59.484 43.478 0.00 0.00 34.61 3.50
2707 3297 3.100671 AGTGCGATCTTCTAGGAAACCT 58.899 45.455 0.00 0.00 37.71 3.50
2708 3298 3.119101 TCAGTGCGATCTTCTAGGAAACC 60.119 47.826 0.00 0.00 0.00 3.27
2709 3299 4.111375 TCAGTGCGATCTTCTAGGAAAC 57.889 45.455 0.00 0.00 0.00 2.78
2710 3300 4.021456 TGTTCAGTGCGATCTTCTAGGAAA 60.021 41.667 0.00 0.00 0.00 3.13
2711 3301 3.509967 TGTTCAGTGCGATCTTCTAGGAA 59.490 43.478 0.00 0.00 0.00 3.36
2712 3302 3.089284 TGTTCAGTGCGATCTTCTAGGA 58.911 45.455 0.00 0.00 0.00 2.94
2723 3313 1.129251 CAGGTTGCTATGTTCAGTGCG 59.871 52.381 0.00 0.00 0.00 5.34
2727 3317 1.825090 TGGCAGGTTGCTATGTTCAG 58.175 50.000 0.67 0.00 44.28 3.02
2836 3426 7.565323 AGTTTCAGATTCATTAGCTTCATCC 57.435 36.000 0.00 0.00 0.00 3.51
2861 3451 2.524640 TACAGCCGACACCACCCA 60.525 61.111 0.00 0.00 0.00 4.51
2959 3549 1.693627 CCGGTAGCTCACTGTATCCT 58.306 55.000 0.00 0.00 0.00 3.24
3027 3617 1.492599 TGTGTTCAATCACCTGACCCA 59.507 47.619 0.00 0.00 37.51 4.51
3028 3618 2.270352 TGTGTTCAATCACCTGACCC 57.730 50.000 0.00 0.00 37.51 4.46
3134 3724 7.989826 ACTTTATTATGAGAATTGACTGGCAC 58.010 34.615 0.00 0.00 0.00 5.01
3164 3754 3.819368 TGCCAGTTTTCTCAATGTCAGA 58.181 40.909 0.00 0.00 0.00 3.27
3195 3785 5.452776 CCATTAGGATTAACAGGCAGTACGA 60.453 44.000 0.00 0.00 36.89 3.43
3197 3787 5.925509 TCCATTAGGATTAACAGGCAGTAC 58.074 41.667 0.00 0.00 39.61 2.73
3212 3802 4.019174 ACAGCTGAACCAATTCCATTAGG 58.981 43.478 23.35 0.00 33.49 2.69
3220 3810 3.213206 TCTGTGACAGCTGAACCAATT 57.787 42.857 23.35 0.00 0.00 2.32
3265 3855 3.585862 CAGTTTAGGCTTGCTTCGTCTA 58.414 45.455 0.00 0.00 0.00 2.59
3268 3858 1.071699 TCCAGTTTAGGCTTGCTTCGT 59.928 47.619 0.00 0.00 0.00 3.85
3365 3955 2.482864 AGGCATTTTGTTTTTCCTGCG 58.517 42.857 0.00 0.00 0.00 5.18
3372 3962 5.789643 TGAGAGCTTAGGCATTTTGTTTT 57.210 34.783 0.00 0.00 41.70 2.43
3382 3972 1.996191 CTTCGTGTTGAGAGCTTAGGC 59.004 52.381 0.00 0.00 39.06 3.93
3398 3988 3.248363 TGCAATGTTGTGTTCTCTCTTCG 59.752 43.478 0.00 0.00 0.00 3.79
3432 4022 1.427368 TGCTACCTGTCCCCAAAATGT 59.573 47.619 0.00 0.00 0.00 2.71
3484 4089 1.675415 GGAGCTCCTGCAACTTCTGAG 60.675 57.143 26.25 0.00 42.74 3.35
3607 4212 9.522804 CCAAAGCTAACAATGTAAAACTGTTAA 57.477 29.630 0.00 0.00 35.66 2.01
3617 4222 7.011499 TCTCCTTACCAAAGCTAACAATGTA 57.989 36.000 0.00 0.00 0.00 2.29
3668 4274 7.993183 ACATGGTACCTAATATTTCAGGTGAAG 59.007 37.037 17.00 7.48 44.93 3.02
3680 4286 6.119536 CCAAAGCTGAACATGGTACCTAATA 58.880 40.000 14.36 0.00 0.00 0.98
3689 4295 4.019174 AGGAATACCAAAGCTGAACATGG 58.981 43.478 0.00 0.00 38.94 3.66
3748 4355 2.304180 AGGTGTGAAGGATCTTCTGGTG 59.696 50.000 8.80 0.00 0.00 4.17
3757 4364 1.065854 GTAGCAGCAGGTGTGAAGGAT 60.066 52.381 0.66 0.00 0.00 3.24
3764 4371 2.238144 AGATGAATGTAGCAGCAGGTGT 59.762 45.455 0.66 0.00 0.00 4.16
3767 4374 3.069872 AGAGAGATGAATGTAGCAGCAGG 59.930 47.826 0.00 0.00 0.00 4.85
3797 4405 2.355363 GCTGCACGTACCACGACA 60.355 61.111 5.61 2.79 46.05 4.35
3801 4409 1.006102 AGTCAGCTGCACGTACCAC 60.006 57.895 9.47 0.00 0.00 4.16
3807 4415 1.923204 GTAGATTCAGTCAGCTGCACG 59.077 52.381 9.47 0.00 42.29 5.34
3824 4432 7.224753 TGTCAAGTTCTGCACTCTTTTTAGTAG 59.775 37.037 0.00 0.00 32.94 2.57
3827 4435 6.363577 TGTCAAGTTCTGCACTCTTTTTAG 57.636 37.500 0.00 0.00 32.94 1.85
3830 4438 4.883585 TGATGTCAAGTTCTGCACTCTTTT 59.116 37.500 0.00 0.00 32.94 2.27
3832 4440 4.063689 CTGATGTCAAGTTCTGCACTCTT 58.936 43.478 0.00 0.00 32.94 2.85
3834 4442 2.740981 CCTGATGTCAAGTTCTGCACTC 59.259 50.000 0.00 0.00 32.94 3.51
3847 4455 1.195448 CACAACTGAACGCCTGATGTC 59.805 52.381 0.00 0.00 29.69 3.06
3881 4489 0.102120 CACAACGCTTCAAAGGGCAA 59.898 50.000 6.72 0.00 42.17 4.52
3882 4490 0.749818 TCACAACGCTTCAAAGGGCA 60.750 50.000 6.72 0.00 42.17 5.36
3883 4491 0.383949 TTCACAACGCTTCAAAGGGC 59.616 50.000 6.72 0.00 42.17 5.19
3884 4492 3.052036 CAATTCACAACGCTTCAAAGGG 58.948 45.455 5.37 5.37 43.82 3.95
3885 4493 3.052036 CCAATTCACAACGCTTCAAAGG 58.948 45.455 0.00 0.00 0.00 3.11
3886 4494 3.052036 CCCAATTCACAACGCTTCAAAG 58.948 45.455 0.00 0.00 0.00 2.77
3887 4495 2.690497 TCCCAATTCACAACGCTTCAAA 59.310 40.909 0.00 0.00 0.00 2.69
3888 4496 2.302260 TCCCAATTCACAACGCTTCAA 58.698 42.857 0.00 0.00 0.00 2.69
3889 4497 1.974265 TCCCAATTCACAACGCTTCA 58.026 45.000 0.00 0.00 0.00 3.02
3890 4498 2.749621 AGATCCCAATTCACAACGCTTC 59.250 45.455 0.00 0.00 0.00 3.86
3891 4499 2.489329 CAGATCCCAATTCACAACGCTT 59.511 45.455 0.00 0.00 0.00 4.68
3892 4500 2.086869 CAGATCCCAATTCACAACGCT 58.913 47.619 0.00 0.00 0.00 5.07
3893 4501 1.812571 ACAGATCCCAATTCACAACGC 59.187 47.619 0.00 0.00 0.00 4.84
3894 4502 3.501828 TCAACAGATCCCAATTCACAACG 59.498 43.478 0.00 0.00 0.00 4.10
3895 4503 5.221224 TGTTCAACAGATCCCAATTCACAAC 60.221 40.000 0.00 0.00 0.00 3.32
3896 4504 4.892345 TGTTCAACAGATCCCAATTCACAA 59.108 37.500 0.00 0.00 0.00 3.33
3897 4505 4.468713 TGTTCAACAGATCCCAATTCACA 58.531 39.130 0.00 0.00 0.00 3.58
3898 4506 5.047802 ACATGTTCAACAGATCCCAATTCAC 60.048 40.000 0.00 0.00 0.00 3.18
3899 4507 5.078949 ACATGTTCAACAGATCCCAATTCA 58.921 37.500 0.00 0.00 0.00 2.57
3946 4554 0.878416 TGTTATGCCGTGCCACTTTC 59.122 50.000 0.00 0.00 0.00 2.62
3956 4564 1.447317 GGGAGCACCATGTTATGCCG 61.447 60.000 1.58 0.00 43.12 5.69
3968 4576 0.184451 ATCCATCATGGTGGGAGCAC 59.816 55.000 24.94 0.00 39.03 4.40
3970 4578 2.107204 ACTAATCCATCATGGTGGGAGC 59.893 50.000 24.94 0.00 39.03 4.70
4006 4740 9.382275 ACAAAAGAAGCAGTTCATTGTTAATTT 57.618 25.926 4.90 0.00 39.81 1.82
4010 4744 6.756074 CCAACAAAAGAAGCAGTTCATTGTTA 59.244 34.615 15.69 0.00 44.60 2.41
4014 4748 5.343307 ACCAACAAAAGAAGCAGTTCATT 57.657 34.783 0.00 0.00 34.82 2.57
4015 4749 6.321181 TCTTACCAACAAAAGAAGCAGTTCAT 59.679 34.615 0.00 0.00 34.82 2.57
4018 4752 6.330278 GTTCTTACCAACAAAAGAAGCAGTT 58.670 36.000 0.00 0.00 41.18 3.16
4019 4753 5.891451 GTTCTTACCAACAAAAGAAGCAGT 58.109 37.500 0.00 0.00 41.18 4.40
4078 4812 3.390017 CATGCGCGTCTCCGATCG 61.390 66.667 8.51 8.51 35.63 3.69
4092 4826 1.121407 TCCATAGAGGGACGGGCATG 61.121 60.000 0.00 0.00 38.24 4.06
4093 4827 0.178891 ATCCATAGAGGGACGGGCAT 60.179 55.000 0.00 0.00 40.44 4.40
4094 4828 0.485543 TATCCATAGAGGGACGGGCA 59.514 55.000 0.00 0.00 40.44 5.36
4140 4886 7.390996 TCGATCTACCATACCACTCTTTCTATC 59.609 40.741 0.00 0.00 0.00 2.08
4180 4926 3.608796 ACTGCACTTTGTTTTGCCAAAT 58.391 36.364 0.00 0.00 38.00 2.32
4212 4958 8.198109 GGCTGTTCTTCTACTGAGTAATCATAA 58.802 37.037 0.00 0.00 0.00 1.90
4219 4965 4.017808 GGAGGCTGTTCTTCTACTGAGTA 58.982 47.826 0.00 0.00 0.00 2.59
4220 4966 2.829120 GGAGGCTGTTCTTCTACTGAGT 59.171 50.000 0.00 0.00 0.00 3.41
4269 5016 8.498358 CATGTAATATGCACGTATTCTGAATGT 58.502 33.333 13.01 0.54 0.00 2.71
4329 5076 8.616598 AGGAAGAGGTAGTACATGCTAGTATAT 58.383 37.037 2.06 0.00 0.00 0.86
4330 5077 7.883833 CAGGAAGAGGTAGTACATGCTAGTATA 59.116 40.741 2.06 0.00 0.00 1.47
4332 5079 6.062749 CAGGAAGAGGTAGTACATGCTAGTA 58.937 44.000 2.06 0.00 0.00 1.82
4333 5080 4.890581 CAGGAAGAGGTAGTACATGCTAGT 59.109 45.833 2.06 0.00 0.00 2.57
4334 5081 4.261825 GCAGGAAGAGGTAGTACATGCTAG 60.262 50.000 2.06 0.00 35.81 3.42
4336 5083 2.432510 GCAGGAAGAGGTAGTACATGCT 59.567 50.000 2.06 0.00 35.81 3.79
4337 5084 2.432510 AGCAGGAAGAGGTAGTACATGC 59.567 50.000 2.06 0.00 38.29 4.06
4338 5085 3.449018 ACAGCAGGAAGAGGTAGTACATG 59.551 47.826 2.06 0.00 0.00 3.21
4339 5086 3.714144 ACAGCAGGAAGAGGTAGTACAT 58.286 45.455 2.06 0.00 0.00 2.29
4384 5146 7.858879 GTGCAAAATTTTCTTCATCATTTGCTT 59.141 29.630 17.71 0.00 46.73 3.91
4388 5150 8.454570 AAGGTGCAAAATTTTCTTCATCATTT 57.545 26.923 0.00 0.00 0.00 2.32
4422 5184 2.673775 TCCTCCATTGTTTGCCTCAA 57.326 45.000 0.00 0.00 0.00 3.02
4423 5185 2.905415 ATCCTCCATTGTTTGCCTCA 57.095 45.000 0.00 0.00 0.00 3.86
4424 5186 4.023707 CGATTATCCTCCATTGTTTGCCTC 60.024 45.833 0.00 0.00 0.00 4.70
4425 5187 3.885297 CGATTATCCTCCATTGTTTGCCT 59.115 43.478 0.00 0.00 0.00 4.75
4426 5188 3.550842 GCGATTATCCTCCATTGTTTGCC 60.551 47.826 0.00 0.00 0.00 4.52
4427 5189 3.550842 GGCGATTATCCTCCATTGTTTGC 60.551 47.826 0.00 0.00 0.00 3.68
4428 5190 3.004734 GGGCGATTATCCTCCATTGTTTG 59.995 47.826 0.00 0.00 0.00 2.93
4429 5191 3.222603 GGGCGATTATCCTCCATTGTTT 58.777 45.455 0.00 0.00 0.00 2.83
4430 5192 2.174639 TGGGCGATTATCCTCCATTGTT 59.825 45.455 0.00 0.00 0.00 2.83
4431 5193 1.774254 TGGGCGATTATCCTCCATTGT 59.226 47.619 0.00 0.00 0.00 2.71
4432 5194 2.154462 GTGGGCGATTATCCTCCATTG 58.846 52.381 4.87 0.00 0.00 2.82
4433 5195 1.073923 GGTGGGCGATTATCCTCCATT 59.926 52.381 4.87 0.00 36.85 3.16
4434 5196 0.693049 GGTGGGCGATTATCCTCCAT 59.307 55.000 4.87 0.00 36.85 3.41
4435 5197 0.399949 AGGTGGGCGATTATCCTCCA 60.400 55.000 0.00 0.00 38.71 3.86
4436 5198 0.035458 CAGGTGGGCGATTATCCTCC 59.965 60.000 0.00 0.00 37.06 4.30
4437 5199 1.048601 TCAGGTGGGCGATTATCCTC 58.951 55.000 0.00 0.00 0.00 3.71
4438 5200 1.141053 GTTCAGGTGGGCGATTATCCT 59.859 52.381 0.00 0.00 0.00 3.24
4439 5201 1.594331 GTTCAGGTGGGCGATTATCC 58.406 55.000 0.00 0.00 0.00 2.59
4440 5202 1.217882 CGTTCAGGTGGGCGATTATC 58.782 55.000 0.00 0.00 0.00 1.75
4441 5203 0.539986 ACGTTCAGGTGGGCGATTAT 59.460 50.000 0.00 0.00 0.00 1.28
4442 5204 0.322322 AACGTTCAGGTGGGCGATTA 59.678 50.000 0.00 0.00 0.00 1.75
4443 5205 0.536460 AAACGTTCAGGTGGGCGATT 60.536 50.000 0.00 0.00 0.00 3.34
4444 5206 0.953960 GAAACGTTCAGGTGGGCGAT 60.954 55.000 0.00 0.00 0.00 4.58
4445 5207 1.595929 GAAACGTTCAGGTGGGCGA 60.596 57.895 0.00 0.00 0.00 5.54
4446 5208 0.320073 TAGAAACGTTCAGGTGGGCG 60.320 55.000 0.00 0.00 0.00 6.13
4447 5209 2.109425 ATAGAAACGTTCAGGTGGGC 57.891 50.000 0.00 0.00 0.00 5.36
4448 5210 2.161609 GCAATAGAAACGTTCAGGTGGG 59.838 50.000 0.00 0.00 0.00 4.61
4449 5211 3.074412 AGCAATAGAAACGTTCAGGTGG 58.926 45.455 0.00 0.00 0.00 4.61
4450 5212 3.745975 TGAGCAATAGAAACGTTCAGGTG 59.254 43.478 0.00 0.00 0.00 4.00
4451 5213 4.002906 TGAGCAATAGAAACGTTCAGGT 57.997 40.909 0.00 0.00 0.00 4.00
4452 5214 6.479990 TGATATGAGCAATAGAAACGTTCAGG 59.520 38.462 0.00 0.00 0.00 3.86
4453 5215 7.307042 CCTGATATGAGCAATAGAAACGTTCAG 60.307 40.741 0.00 0.00 0.00 3.02
4454 5216 6.479990 CCTGATATGAGCAATAGAAACGTTCA 59.520 38.462 0.00 0.00 0.00 3.18
4455 5217 6.073548 CCCTGATATGAGCAATAGAAACGTTC 60.074 42.308 0.00 0.00 0.00 3.95
4456 5218 5.760253 CCCTGATATGAGCAATAGAAACGTT 59.240 40.000 0.00 0.00 0.00 3.99
4457 5219 5.300752 CCCTGATATGAGCAATAGAAACGT 58.699 41.667 0.00 0.00 0.00 3.99
4458 5220 4.692625 CCCCTGATATGAGCAATAGAAACG 59.307 45.833 0.00 0.00 0.00 3.60
4459 5221 5.006386 CCCCCTGATATGAGCAATAGAAAC 58.994 45.833 0.00 0.00 0.00 2.78
4460 5222 4.913355 TCCCCCTGATATGAGCAATAGAAA 59.087 41.667 0.00 0.00 0.00 2.52
4461 5223 4.502415 TCCCCCTGATATGAGCAATAGAA 58.498 43.478 0.00 0.00 0.00 2.10
4462 5224 4.099633 CTCCCCCTGATATGAGCAATAGA 58.900 47.826 0.00 0.00 0.00 1.98
4463 5225 4.099633 TCTCCCCCTGATATGAGCAATAG 58.900 47.826 0.00 0.00 0.00 1.73
4464 5226 4.099633 CTCTCCCCCTGATATGAGCAATA 58.900 47.826 0.00 0.00 0.00 1.90
4465 5227 2.911636 CTCTCCCCCTGATATGAGCAAT 59.088 50.000 0.00 0.00 0.00 3.56
4466 5228 2.090550 TCTCTCCCCCTGATATGAGCAA 60.091 50.000 0.00 0.00 0.00 3.91
4467 5229 1.505098 TCTCTCCCCCTGATATGAGCA 59.495 52.381 0.00 0.00 0.00 4.26
4468 5230 2.317371 TCTCTCCCCCTGATATGAGC 57.683 55.000 0.00 0.00 0.00 4.26
4469 5231 4.058417 TCATCTCTCCCCCTGATATGAG 57.942 50.000 0.00 0.00 0.00 2.90
4470 5232 4.706645 ATCATCTCTCCCCCTGATATGA 57.293 45.455 0.00 0.00 33.63 2.15
4471 5233 5.723405 TGTAATCATCTCTCCCCCTGATATG 59.277 44.000 0.00 0.00 0.00 1.78
4472 5234 5.920347 TGTAATCATCTCTCCCCCTGATAT 58.080 41.667 0.00 0.00 0.00 1.63
4473 5235 5.336945 CTGTAATCATCTCTCCCCCTGATA 58.663 45.833 0.00 0.00 0.00 2.15
4474 5236 4.166539 CTGTAATCATCTCTCCCCCTGAT 58.833 47.826 0.00 0.00 0.00 2.90
4475 5237 3.581101 CTGTAATCATCTCTCCCCCTGA 58.419 50.000 0.00 0.00 0.00 3.86
4476 5238 2.038295 GCTGTAATCATCTCTCCCCCTG 59.962 54.545 0.00 0.00 0.00 4.45
4477 5239 2.334023 GCTGTAATCATCTCTCCCCCT 58.666 52.381 0.00 0.00 0.00 4.79
4478 5240 2.050144 TGCTGTAATCATCTCTCCCCC 58.950 52.381 0.00 0.00 0.00 5.40
4479 5241 3.118261 TGTTGCTGTAATCATCTCTCCCC 60.118 47.826 0.00 0.00 0.00 4.81
4480 5242 4.142609 TGTTGCTGTAATCATCTCTCCC 57.857 45.455 0.00 0.00 0.00 4.30
4481 5243 6.644592 GTCTATGTTGCTGTAATCATCTCTCC 59.355 42.308 0.00 0.00 0.00 3.71
4482 5244 7.432869 AGTCTATGTTGCTGTAATCATCTCTC 58.567 38.462 0.00 0.00 0.00 3.20
4483 5245 7.358770 AGTCTATGTTGCTGTAATCATCTCT 57.641 36.000 0.00 0.00 0.00 3.10
4484 5246 6.362016 CGAGTCTATGTTGCTGTAATCATCTC 59.638 42.308 0.00 0.00 0.00 2.75
4485 5247 6.212235 CGAGTCTATGTTGCTGTAATCATCT 58.788 40.000 0.00 0.00 0.00 2.90
4486 5248 5.107683 GCGAGTCTATGTTGCTGTAATCATC 60.108 44.000 0.00 0.00 0.00 2.92
4487 5249 4.747108 GCGAGTCTATGTTGCTGTAATCAT 59.253 41.667 0.00 0.00 0.00 2.45
4488 5250 4.112634 GCGAGTCTATGTTGCTGTAATCA 58.887 43.478 0.00 0.00 0.00 2.57
4489 5251 4.026475 GTGCGAGTCTATGTTGCTGTAATC 60.026 45.833 0.00 0.00 0.00 1.75
4490 5252 3.865745 GTGCGAGTCTATGTTGCTGTAAT 59.134 43.478 0.00 0.00 0.00 1.89
4491 5253 3.250744 GTGCGAGTCTATGTTGCTGTAA 58.749 45.455 0.00 0.00 0.00 2.41
4492 5254 2.230266 TGTGCGAGTCTATGTTGCTGTA 59.770 45.455 0.00 0.00 0.00 2.74
4493 5255 1.000843 TGTGCGAGTCTATGTTGCTGT 59.999 47.619 0.00 0.00 0.00 4.40
4494 5256 1.713597 TGTGCGAGTCTATGTTGCTG 58.286 50.000 0.00 0.00 0.00 4.41
4495 5257 2.680312 ATGTGCGAGTCTATGTTGCT 57.320 45.000 0.00 0.00 0.00 3.91
4496 5258 3.706698 TCTATGTGCGAGTCTATGTTGC 58.293 45.455 0.00 0.00 0.00 4.17
4497 5259 4.737279 CACTCTATGTGCGAGTCTATGTTG 59.263 45.833 0.00 0.00 39.59 3.33
4498 5260 4.640647 TCACTCTATGTGCGAGTCTATGTT 59.359 41.667 0.00 0.00 45.81 2.71
4499 5261 4.200092 TCACTCTATGTGCGAGTCTATGT 58.800 43.478 0.00 0.00 45.81 2.29
4500 5262 4.820284 TCACTCTATGTGCGAGTCTATG 57.180 45.455 0.00 0.00 45.81 2.23
4501 5263 6.398234 AATTCACTCTATGTGCGAGTCTAT 57.602 37.500 0.00 0.00 45.81 1.98
4502 5264 5.836821 AATTCACTCTATGTGCGAGTCTA 57.163 39.130 0.00 0.00 45.81 2.59
4503 5265 4.727507 AATTCACTCTATGTGCGAGTCT 57.272 40.909 0.00 0.00 45.81 3.24
4504 5266 6.477033 ACATAAATTCACTCTATGTGCGAGTC 59.523 38.462 0.04 0.00 45.81 3.36
4505 5267 6.256539 CACATAAATTCACTCTATGTGCGAGT 59.743 38.462 12.11 0.00 43.37 4.18
4506 5268 6.643845 CACATAAATTCACTCTATGTGCGAG 58.356 40.000 12.11 0.00 43.37 5.03
4507 5269 6.588348 CACATAAATTCACTCTATGTGCGA 57.412 37.500 12.11 0.00 43.37 5.10
4511 5273 7.063426 CGTGTCACACATAAATTCACTCTATGT 59.937 37.037 9.06 0.00 36.85 2.29
4512 5274 7.063426 ACGTGTCACACATAAATTCACTCTATG 59.937 37.037 9.06 0.00 33.40 2.23
4513 5275 7.063426 CACGTGTCACACATAAATTCACTCTAT 59.937 37.037 9.06 0.00 33.40 1.98
4514 5276 6.364976 CACGTGTCACACATAAATTCACTCTA 59.635 38.462 9.06 0.00 33.40 2.43
4515 5277 5.177511 CACGTGTCACACATAAATTCACTCT 59.822 40.000 9.06 0.00 33.40 3.24
4516 5278 5.176774 TCACGTGTCACACATAAATTCACTC 59.823 40.000 16.51 0.00 33.40 3.51
4517 5279 5.053811 TCACGTGTCACACATAAATTCACT 58.946 37.500 16.51 0.00 33.40 3.41
4518 5280 5.176774 TCTCACGTGTCACACATAAATTCAC 59.823 40.000 16.51 0.00 33.40 3.18
4519 5281 5.293560 TCTCACGTGTCACACATAAATTCA 58.706 37.500 16.51 0.00 33.40 2.57
4520 5282 5.839262 TCTCACGTGTCACACATAAATTC 57.161 39.130 16.51 0.00 33.40 2.17
4521 5283 5.334105 GCTTCTCACGTGTCACACATAAATT 60.334 40.000 16.51 0.00 33.40 1.82
4522 5284 4.152402 GCTTCTCACGTGTCACACATAAAT 59.848 41.667 16.51 0.00 33.40 1.40
4523 5285 3.493129 GCTTCTCACGTGTCACACATAAA 59.507 43.478 16.51 0.00 33.40 1.40
4524 5286 3.057019 GCTTCTCACGTGTCACACATAA 58.943 45.455 16.51 0.00 33.40 1.90
4525 5287 2.296190 AGCTTCTCACGTGTCACACATA 59.704 45.455 16.51 0.00 33.40 2.29
4526 5288 1.069204 AGCTTCTCACGTGTCACACAT 59.931 47.619 16.51 0.00 33.40 3.21
4527 5289 0.459899 AGCTTCTCACGTGTCACACA 59.540 50.000 16.51 0.00 33.40 3.72
4528 5290 1.571919 AAGCTTCTCACGTGTCACAC 58.428 50.000 16.51 0.00 0.00 3.82
4529 5291 2.309528 AAAGCTTCTCACGTGTCACA 57.690 45.000 16.51 0.00 0.00 3.58
4530 5292 3.639538 TCTAAAGCTTCTCACGTGTCAC 58.360 45.455 16.51 2.20 0.00 3.67
4531 5293 4.521130 ATCTAAAGCTTCTCACGTGTCA 57.479 40.909 16.51 0.00 0.00 3.58
4532 5294 4.686554 ACAATCTAAAGCTTCTCACGTGTC 59.313 41.667 16.51 1.24 0.00 3.67
4533 5295 4.632153 ACAATCTAAAGCTTCTCACGTGT 58.368 39.130 16.51 0.00 0.00 4.49
4534 5296 5.406780 AGAACAATCTAAAGCTTCTCACGTG 59.593 40.000 9.94 9.94 32.88 4.49
4535 5297 5.542779 AGAACAATCTAAAGCTTCTCACGT 58.457 37.500 0.00 0.00 32.88 4.49
4536 5298 6.473397 AAGAACAATCTAAAGCTTCTCACG 57.527 37.500 0.00 0.00 33.77 4.35
4537 5299 7.174080 AGGAAAGAACAATCTAAAGCTTCTCAC 59.826 37.037 0.00 0.00 33.77 3.51
4538 5300 7.227156 AGGAAAGAACAATCTAAAGCTTCTCA 58.773 34.615 0.00 0.00 33.77 3.27
4539 5301 7.680442 AGGAAAGAACAATCTAAAGCTTCTC 57.320 36.000 0.00 0.00 33.77 2.87
4540 5302 9.004717 GTAAGGAAAGAACAATCTAAAGCTTCT 57.995 33.333 0.00 0.00 33.77 2.85
4541 5303 7.958025 CGTAAGGAAAGAACAATCTAAAGCTTC 59.042 37.037 0.00 0.00 33.77 3.86
4542 5304 7.660208 TCGTAAGGAAAGAACAATCTAAAGCTT 59.340 33.333 0.00 0.00 34.31 3.74
4543 5305 7.159372 TCGTAAGGAAAGAACAATCTAAAGCT 58.841 34.615 0.00 0.00 34.31 3.74
4544 5306 7.360575 TCGTAAGGAAAGAACAATCTAAAGC 57.639 36.000 0.00 0.00 34.31 3.51
4558 5320 5.450826 GGTGAAAGCCTTTTTCGTAAGGAAA 60.451 40.000 14.84 0.00 46.28 3.13
4559 5321 4.037089 GGTGAAAGCCTTTTTCGTAAGGAA 59.963 41.667 14.84 0.00 46.28 3.36
4560 5322 3.566742 GGTGAAAGCCTTTTTCGTAAGGA 59.433 43.478 14.84 0.00 46.28 3.36
4561 5323 3.897325 GGTGAAAGCCTTTTTCGTAAGG 58.103 45.455 8.66 8.66 46.14 2.69
4574 5336 5.975344 GCTTTATATAAAACGGGGTGAAAGC 59.025 40.000 9.15 2.98 39.39 3.51
4575 5337 7.090953 TGCTTTATATAAAACGGGGTGAAAG 57.909 36.000 9.15 0.00 0.00 2.62
4576 5338 7.463961 TTGCTTTATATAAAACGGGGTGAAA 57.536 32.000 9.15 0.00 0.00 2.69
4577 5339 7.339721 TCATTGCTTTATATAAAACGGGGTGAA 59.660 33.333 9.15 0.00 0.00 3.18
4578 5340 6.829298 TCATTGCTTTATATAAAACGGGGTGA 59.171 34.615 9.15 6.51 0.00 4.02
4579 5341 7.033530 TCATTGCTTTATATAAAACGGGGTG 57.966 36.000 9.15 4.66 0.00 4.61
4580 5342 7.504238 TGATCATTGCTTTATATAAAACGGGGT 59.496 33.333 9.15 0.00 0.00 4.95
4581 5343 7.881142 TGATCATTGCTTTATATAAAACGGGG 58.119 34.615 9.15 0.00 0.00 5.73
4582 5344 9.180678 GTTGATCATTGCTTTATATAAAACGGG 57.819 33.333 9.15 0.00 0.00 5.28
4583 5345 9.729023 TGTTGATCATTGCTTTATATAAAACGG 57.271 29.630 9.15 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.