Multiple sequence alignment - TraesCS2D01G448900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G448900 chr2D 100.000 5476 0 0 1 5476 558799194 558804669 0.000000e+00 10113.0
1 TraesCS2D01G448900 chr2D 93.333 270 16 2 2166 2433 315858988 315859257 1.110000e-106 398.0
2 TraesCS2D01G448900 chr2D 93.585 265 15 1 2165 2429 194819109 194818847 1.430000e-105 394.0
3 TraesCS2D01G448900 chr2A 91.200 3159 165 46 1999 5101 699512487 699515588 0.000000e+00 4189.0
4 TraesCS2D01G448900 chr2A 92.550 1490 54 19 514 1973 699511030 699512492 0.000000e+00 2084.0
5 TraesCS2D01G448900 chr2A 93.600 250 16 0 5227 5476 699515960 699516209 1.860000e-99 374.0
6 TraesCS2D01G448900 chr2A 94.079 152 9 0 359 510 725349677 725349828 1.190000e-56 231.0
7 TraesCS2D01G448900 chr2A 96.269 134 1 1 5100 5233 699515669 699515798 3.320000e-52 217.0
8 TraesCS2D01G448900 chr2B 92.167 1698 72 26 3414 5101 667416303 667417949 0.000000e+00 2342.0
9 TraesCS2D01G448900 chr2B 93.745 1295 51 15 545 1822 667413416 667414697 0.000000e+00 1916.0
10 TraesCS2D01G448900 chr2B 91.486 552 21 11 2425 2960 667415141 667415682 0.000000e+00 736.0
11 TraesCS2D01G448900 chr2B 94.872 312 14 2 1859 2170 667414831 667415140 2.290000e-133 486.0
12 TraesCS2D01G448900 chr2B 96.774 279 8 1 3033 3311 667415715 667415992 1.070000e-126 464.0
13 TraesCS2D01G448900 chr2B 94.079 152 9 0 360 511 386595249 386595098 1.190000e-56 231.0
14 TraesCS2D01G448900 chr2B 80.000 275 21 22 5236 5476 667418347 667418621 7.290000e-39 172.0
15 TraesCS2D01G448900 chr2B 95.283 106 5 0 3313 3418 667416077 667416182 9.430000e-38 169.0
16 TraesCS2D01G448900 chr6B 83.287 1077 94 38 1146 2169 560650359 560651402 0.000000e+00 913.0
17 TraesCS2D01G448900 chr6B 85.572 402 33 15 2424 2824 560651398 560651775 1.110000e-106 398.0
18 TraesCS2D01G448900 chr6B 93.284 268 16 2 2165 2431 214870607 214870341 1.430000e-105 394.0
19 TraesCS2D01G448900 chr6B 89.333 150 16 0 359 508 584581184 584581333 7.240000e-44 189.0
20 TraesCS2D01G448900 chr6B 88.172 93 4 4 963 1055 560650269 560650354 2.700000e-18 104.0
21 TraesCS2D01G448900 chr6B 100.000 37 0 0 1405 1441 96474642 96474606 9.840000e-08 69.4
22 TraesCS2D01G448900 chr5D 94.737 266 14 0 2166 2431 202399607 202399342 1.100000e-111 414.0
23 TraesCS2D01G448900 chr5D 93.916 263 16 0 2165 2427 279293132 279292870 1.110000e-106 398.0
24 TraesCS2D01G448900 chr5D 88.158 152 18 0 358 509 320417701 320417852 1.210000e-41 182.0
25 TraesCS2D01G448900 chr6D 94.007 267 16 0 2166 2432 410373780 410373514 6.600000e-109 405.0
26 TraesCS2D01G448900 chr6D 95.420 131 6 0 359 489 292962742 292962872 5.560000e-50 209.0
27 TraesCS2D01G448900 chr6D 86.154 65 5 2 1377 1440 41443356 41443417 3.540000e-07 67.6
28 TraesCS2D01G448900 chr4A 93.561 264 17 0 2163 2426 674616791 674617054 1.430000e-105 394.0
29 TraesCS2D01G448900 chr7A 92.058 277 19 2 2166 2439 329488540 329488264 2.390000e-103 387.0
30 TraesCS2D01G448900 chr7A 97.436 156 3 1 354 509 732938616 732938462 1.170000e-66 265.0
31 TraesCS2D01G448900 chr7D 97.386 153 4 0 357 509 519108185 519108337 1.510000e-65 261.0
32 TraesCS2D01G448900 chr1D 96.078 153 6 0 357 509 143175875 143175723 3.270000e-62 250.0
33 TraesCS2D01G448900 chr5B 90.196 153 11 2 359 510 137409194 137409045 4.330000e-46 196.0
34 TraesCS2D01G448900 chr6A 87.500 64 4 2 1379 1441 51919768 51919828 2.740000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G448900 chr2D 558799194 558804669 5475 False 10113.000000 10113 100.000000 1 5476 1 chr2D.!!$F2 5475
1 TraesCS2D01G448900 chr2A 699511030 699516209 5179 False 1716.000000 4189 93.404750 514 5476 4 chr2A.!!$F2 4962
2 TraesCS2D01G448900 chr2B 667413416 667418621 5205 False 897.857143 2342 92.046714 545 5476 7 chr2B.!!$F1 4931
3 TraesCS2D01G448900 chr6B 560650269 560651775 1506 False 471.666667 913 85.677000 963 2824 3 chr6B.!!$F2 1861

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
292 293 0.030101 GAGGAGATCGGACGCAGAAG 59.970 60.0 0.00 0.0 0.00 2.85 F
309 310 0.037326 AAGATGGCGTTCGCTCAGAA 60.037 50.0 16.40 0.0 36.31 3.02 F
310 311 0.037326 AGATGGCGTTCGCTCAGAAA 60.037 50.0 16.40 0.0 41.10 2.52 F
314 315 0.164002 GGCGTTCGCTCAGAAAACTC 59.836 55.0 16.40 0.0 41.10 3.01 F
470 471 0.179108 GGCCCTGCTACTTCGTACAG 60.179 60.0 0.00 0.0 0.00 2.74 F
1414 1467 0.391793 CGTGAAGAAGAAGAGGGGGC 60.392 60.0 0.00 0.0 0.00 5.80 F
2831 3049 0.179702 GCTGCTGATCCACAGGATGA 59.820 55.0 2.74 0.0 45.30 2.92 F
3385 3698 0.036952 TTCTGTAGCCTGCACTCTGC 60.037 55.0 0.00 0.0 45.29 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1672 1728 2.890311 TGGTGGCAAACATGTAGAAAGG 59.110 45.455 0.00 0.00 0.00 3.11 R
1994 2166 4.055710 TGATACTCCTATATTGCCCGGA 57.944 45.455 0.73 0.00 0.00 5.14 R
1995 2167 4.162320 ACATGATACTCCTATATTGCCCGG 59.838 45.833 0.00 0.00 0.00 5.73 R
2186 2390 4.953667 TCAGCCAACTCTAATATGCAGAG 58.046 43.478 11.37 11.37 44.28 3.35 R
2456 2660 0.037697 AACAACCAGAGCACGCGATA 60.038 50.000 15.93 0.00 0.00 2.92 R
3075 3305 1.159285 TCGAAGCAACATCCTGCAAG 58.841 50.000 0.00 0.00 45.18 4.01 R
4391 4868 0.249447 CCGGAGCATATGAAGCGTGA 60.249 55.000 6.97 0.00 37.01 4.35 R
4481 4958 0.394938 TGAAGCTGCTGTAAACCGGA 59.605 50.000 9.46 0.00 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.412722 ACAACGGTGAGAATTGCCA 57.587 47.368 7.88 0.00 0.00 4.92
19 20 1.909700 ACAACGGTGAGAATTGCCAT 58.090 45.000 7.88 0.00 0.00 4.40
20 21 1.541147 ACAACGGTGAGAATTGCCATG 59.459 47.619 7.88 0.00 0.00 3.66
21 22 0.527565 AACGGTGAGAATTGCCATGC 59.472 50.000 0.00 0.00 0.00 4.06
22 23 0.322816 ACGGTGAGAATTGCCATGCT 60.323 50.000 0.00 0.00 0.00 3.79
23 24 1.065491 ACGGTGAGAATTGCCATGCTA 60.065 47.619 0.00 0.00 0.00 3.49
24 25 2.224606 CGGTGAGAATTGCCATGCTAT 58.775 47.619 0.00 0.00 0.00 2.97
25 26 3.181455 ACGGTGAGAATTGCCATGCTATA 60.181 43.478 0.00 0.00 0.00 1.31
26 27 3.434641 CGGTGAGAATTGCCATGCTATAG 59.565 47.826 0.00 0.00 0.00 1.31
27 28 4.392940 GGTGAGAATTGCCATGCTATAGT 58.607 43.478 0.84 0.00 0.00 2.12
28 29 5.551233 GGTGAGAATTGCCATGCTATAGTA 58.449 41.667 0.84 0.00 0.00 1.82
29 30 5.997746 GGTGAGAATTGCCATGCTATAGTAA 59.002 40.000 0.84 0.00 0.00 2.24
30 31 6.148480 GGTGAGAATTGCCATGCTATAGTAAG 59.852 42.308 0.84 0.00 0.00 2.34
31 32 6.931281 GTGAGAATTGCCATGCTATAGTAAGA 59.069 38.462 0.84 0.00 0.00 2.10
32 33 7.442364 GTGAGAATTGCCATGCTATAGTAAGAA 59.558 37.037 0.84 0.00 0.00 2.52
33 34 7.992608 TGAGAATTGCCATGCTATAGTAAGAAA 59.007 33.333 0.84 0.00 0.00 2.52
34 35 8.159344 AGAATTGCCATGCTATAGTAAGAAAC 57.841 34.615 0.84 0.00 0.00 2.78
35 36 7.995488 AGAATTGCCATGCTATAGTAAGAAACT 59.005 33.333 0.84 0.00 42.62 2.66
36 37 8.525290 AATTGCCATGCTATAGTAAGAAACTT 57.475 30.769 0.84 0.00 39.80 2.66
37 38 7.938140 TTGCCATGCTATAGTAAGAAACTTT 57.062 32.000 0.84 0.00 39.80 2.66
38 39 7.553881 TGCCATGCTATAGTAAGAAACTTTC 57.446 36.000 0.84 0.00 39.80 2.62
39 40 7.109501 TGCCATGCTATAGTAAGAAACTTTCA 58.890 34.615 0.84 0.00 39.80 2.69
40 41 7.775093 TGCCATGCTATAGTAAGAAACTTTCAT 59.225 33.333 0.84 0.00 39.80 2.57
41 42 9.273016 GCCATGCTATAGTAAGAAACTTTCATA 57.727 33.333 0.84 0.00 39.80 2.15
45 46 9.314321 TGCTATAGTAAGAAACTTTCATACTGC 57.686 33.333 21.67 17.95 42.29 4.40
46 47 9.314321 GCTATAGTAAGAAACTTTCATACTGCA 57.686 33.333 21.67 12.38 42.29 4.41
49 50 7.801716 AGTAAGAAACTTTCATACTGCAACA 57.198 32.000 15.43 0.00 41.20 3.33
50 51 8.220755 AGTAAGAAACTTTCATACTGCAACAA 57.779 30.769 15.43 0.00 41.20 2.83
51 52 8.129211 AGTAAGAAACTTTCATACTGCAACAAC 58.871 33.333 15.43 0.00 41.20 3.32
52 53 6.449635 AGAAACTTTCATACTGCAACAACA 57.550 33.333 4.34 0.00 0.00 3.33
53 54 6.498304 AGAAACTTTCATACTGCAACAACAG 58.502 36.000 4.34 0.00 43.59 3.16
54 55 6.318648 AGAAACTTTCATACTGCAACAACAGA 59.681 34.615 4.34 0.00 40.25 3.41
55 56 5.679734 ACTTTCATACTGCAACAACAGAG 57.320 39.130 0.00 0.00 40.25 3.35
56 57 5.368145 ACTTTCATACTGCAACAACAGAGA 58.632 37.500 0.00 0.00 40.25 3.10
57 58 5.822519 ACTTTCATACTGCAACAACAGAGAA 59.177 36.000 0.00 0.00 40.25 2.87
58 59 6.318648 ACTTTCATACTGCAACAACAGAGAAA 59.681 34.615 0.00 5.35 40.25 2.52
59 60 6.691754 TTCATACTGCAACAACAGAGAAAA 57.308 33.333 0.00 0.00 40.25 2.29
60 61 6.691754 TCATACTGCAACAACAGAGAAAAA 57.308 33.333 0.00 0.00 40.25 1.94
61 62 7.275888 TCATACTGCAACAACAGAGAAAAAT 57.724 32.000 0.00 0.00 40.25 1.82
62 63 7.140705 TCATACTGCAACAACAGAGAAAAATG 58.859 34.615 0.00 0.00 40.25 2.32
63 64 4.114794 ACTGCAACAACAGAGAAAAATGC 58.885 39.130 0.00 0.00 40.25 3.56
64 65 3.456280 TGCAACAACAGAGAAAAATGCC 58.544 40.909 0.00 0.00 0.00 4.40
65 66 3.118847 TGCAACAACAGAGAAAAATGCCA 60.119 39.130 0.00 0.00 0.00 4.92
66 67 3.245990 GCAACAACAGAGAAAAATGCCAC 59.754 43.478 0.00 0.00 0.00 5.01
67 68 4.431809 CAACAACAGAGAAAAATGCCACA 58.568 39.130 0.00 0.00 0.00 4.17
68 69 4.045636 ACAACAGAGAAAAATGCCACAC 57.954 40.909 0.00 0.00 0.00 3.82
69 70 3.446873 ACAACAGAGAAAAATGCCACACA 59.553 39.130 0.00 0.00 0.00 3.72
70 71 4.099881 ACAACAGAGAAAAATGCCACACAT 59.900 37.500 0.00 0.00 42.30 3.21
71 72 4.247267 ACAGAGAAAAATGCCACACATG 57.753 40.909 0.00 0.00 39.60 3.21
72 73 3.638160 ACAGAGAAAAATGCCACACATGT 59.362 39.130 0.00 0.00 39.60 3.21
73 74 4.232221 CAGAGAAAAATGCCACACATGTC 58.768 43.478 0.00 0.00 39.60 3.06
74 75 4.022589 CAGAGAAAAATGCCACACATGTCT 60.023 41.667 0.00 0.00 39.60 3.41
75 76 4.217118 AGAGAAAAATGCCACACATGTCTC 59.783 41.667 0.00 0.00 39.60 3.36
76 77 3.890756 AGAAAAATGCCACACATGTCTCA 59.109 39.130 0.00 0.00 39.60 3.27
77 78 4.525487 AGAAAAATGCCACACATGTCTCAT 59.475 37.500 0.00 0.00 39.60 2.90
78 79 4.877378 AAAATGCCACACATGTCTCATT 57.123 36.364 0.00 0.63 39.60 2.57
79 80 5.981088 AAAATGCCACACATGTCTCATTA 57.019 34.783 0.00 0.00 39.60 1.90
80 81 5.981088 AAATGCCACACATGTCTCATTAA 57.019 34.783 0.00 0.00 39.60 1.40
81 82 5.981088 AATGCCACACATGTCTCATTAAA 57.019 34.783 0.00 0.00 39.60 1.52
82 83 5.981088 ATGCCACACATGTCTCATTAAAA 57.019 34.783 0.00 0.00 37.70 1.52
83 84 5.781210 TGCCACACATGTCTCATTAAAAA 57.219 34.783 0.00 0.00 0.00 1.94
84 85 5.527951 TGCCACACATGTCTCATTAAAAAC 58.472 37.500 0.00 0.00 0.00 2.43
85 86 5.068329 TGCCACACATGTCTCATTAAAAACA 59.932 36.000 0.00 0.00 0.00 2.83
86 87 6.158598 GCCACACATGTCTCATTAAAAACAT 58.841 36.000 0.00 0.00 32.73 2.71
87 88 6.646240 GCCACACATGTCTCATTAAAAACATT 59.354 34.615 0.00 0.00 30.16 2.71
88 89 7.812191 GCCACACATGTCTCATTAAAAACATTA 59.188 33.333 0.00 0.00 30.16 1.90
89 90 9.345517 CCACACATGTCTCATTAAAAACATTAG 57.654 33.333 0.00 0.00 30.16 1.73
92 93 9.778993 CACATGTCTCATTAAAAACATTAGAGG 57.221 33.333 0.00 0.00 30.16 3.69
93 94 8.960591 ACATGTCTCATTAAAAACATTAGAGGG 58.039 33.333 0.00 0.00 30.16 4.30
94 95 9.177608 CATGTCTCATTAAAAACATTAGAGGGA 57.822 33.333 0.00 0.00 30.16 4.20
95 96 8.792830 TGTCTCATTAAAAACATTAGAGGGAG 57.207 34.615 0.00 0.00 0.00 4.30
96 97 7.336931 TGTCTCATTAAAAACATTAGAGGGAGC 59.663 37.037 0.00 0.00 0.00 4.70
97 98 6.828785 TCTCATTAAAAACATTAGAGGGAGCC 59.171 38.462 0.00 0.00 0.00 4.70
98 99 5.588648 TCATTAAAAACATTAGAGGGAGCCG 59.411 40.000 0.00 0.00 0.00 5.52
99 100 1.751437 AAAACATTAGAGGGAGCCGC 58.249 50.000 0.00 0.00 0.00 6.53
100 101 0.107165 AAACATTAGAGGGAGCCGCC 60.107 55.000 0.00 0.00 0.00 6.13
101 102 1.271840 AACATTAGAGGGAGCCGCCA 61.272 55.000 0.00 0.00 38.95 5.69
102 103 1.056700 ACATTAGAGGGAGCCGCCAT 61.057 55.000 0.00 0.00 38.95 4.40
103 104 0.604780 CATTAGAGGGAGCCGCCATG 60.605 60.000 0.00 0.00 38.95 3.66
104 105 0.764369 ATTAGAGGGAGCCGCCATGA 60.764 55.000 0.00 0.00 38.95 3.07
105 106 0.764369 TTAGAGGGAGCCGCCATGAT 60.764 55.000 0.00 0.00 38.95 2.45
106 107 0.114364 TAGAGGGAGCCGCCATGATA 59.886 55.000 0.00 0.00 38.95 2.15
107 108 1.004440 GAGGGAGCCGCCATGATAC 60.004 63.158 0.00 0.00 38.95 2.24
108 109 1.758440 GAGGGAGCCGCCATGATACA 61.758 60.000 0.00 0.00 38.95 2.29
109 110 1.598130 GGGAGCCGCCATGATACAC 60.598 63.158 0.00 0.00 38.95 2.90
110 111 1.146041 GGAGCCGCCATGATACACA 59.854 57.895 0.00 0.00 36.34 3.72
111 112 0.250467 GGAGCCGCCATGATACACAT 60.250 55.000 0.00 0.00 40.17 3.21
112 113 1.001974 GGAGCCGCCATGATACACATA 59.998 52.381 0.00 0.00 37.46 2.29
113 114 2.341257 GAGCCGCCATGATACACATAG 58.659 52.381 0.00 0.00 37.46 2.23
114 115 1.970640 AGCCGCCATGATACACATAGA 59.029 47.619 0.00 0.00 37.46 1.98
115 116 2.368548 AGCCGCCATGATACACATAGAA 59.631 45.455 0.00 0.00 37.46 2.10
116 117 3.138304 GCCGCCATGATACACATAGAAA 58.862 45.455 0.00 0.00 37.46 2.52
117 118 3.753272 GCCGCCATGATACACATAGAAAT 59.247 43.478 0.00 0.00 37.46 2.17
118 119 4.216257 GCCGCCATGATACACATAGAAATT 59.784 41.667 0.00 0.00 37.46 1.82
119 120 5.692814 CCGCCATGATACACATAGAAATTG 58.307 41.667 0.00 0.00 37.46 2.32
120 121 5.239306 CCGCCATGATACACATAGAAATTGT 59.761 40.000 0.00 0.00 37.46 2.71
122 123 6.018016 CGCCATGATACACATAGAAATTGTGA 60.018 38.462 10.51 0.00 45.83 3.58
123 124 7.308169 CGCCATGATACACATAGAAATTGTGAT 60.308 37.037 10.51 0.83 45.83 3.06
124 125 7.806487 GCCATGATACACATAGAAATTGTGATG 59.194 37.037 10.51 4.14 45.83 3.07
125 126 7.806487 CCATGATACACATAGAAATTGTGATGC 59.194 37.037 10.51 0.70 45.83 3.91
126 127 8.565416 CATGATACACATAGAAATTGTGATGCT 58.435 33.333 10.51 0.00 45.83 3.79
127 128 8.510243 TGATACACATAGAAATTGTGATGCTT 57.490 30.769 10.51 0.00 45.83 3.91
128 129 9.612066 TGATACACATAGAAATTGTGATGCTTA 57.388 29.630 10.51 0.00 45.83 3.09
142 143 9.736414 ATTGTGATGCTTATATAGAAGAATGCT 57.264 29.630 11.29 0.00 0.00 3.79
144 145 9.645059 TGTGATGCTTATATAGAAGAATGCTAC 57.355 33.333 11.29 5.76 0.00 3.58
145 146 9.868277 GTGATGCTTATATAGAAGAATGCTACT 57.132 33.333 11.29 0.00 0.00 2.57
156 157 7.992754 AGAAGAATGCTACTTGTTCAAGATT 57.007 32.000 17.75 7.90 32.41 2.40
157 158 8.401490 AGAAGAATGCTACTTGTTCAAGATTT 57.599 30.769 17.75 0.37 32.41 2.17
158 159 8.295288 AGAAGAATGCTACTTGTTCAAGATTTG 58.705 33.333 17.75 6.91 32.41 2.32
159 160 6.385033 AGAATGCTACTTGTTCAAGATTTGC 58.615 36.000 17.75 14.48 0.00 3.68
160 161 5.710513 ATGCTACTTGTTCAAGATTTGCA 57.289 34.783 17.75 18.23 0.00 4.08
161 162 5.710513 TGCTACTTGTTCAAGATTTGCAT 57.289 34.783 17.75 0.00 0.00 3.96
162 163 5.702865 TGCTACTTGTTCAAGATTTGCATC 58.297 37.500 17.75 0.00 0.00 3.91
163 164 4.790140 GCTACTTGTTCAAGATTTGCATCG 59.210 41.667 17.75 0.00 34.17 3.84
164 165 4.836125 ACTTGTTCAAGATTTGCATCGT 57.164 36.364 17.75 0.00 34.17 3.73
165 166 5.186996 ACTTGTTCAAGATTTGCATCGTT 57.813 34.783 17.75 0.00 34.17 3.85
166 167 4.977963 ACTTGTTCAAGATTTGCATCGTTG 59.022 37.500 17.75 0.00 34.17 4.10
167 168 3.899734 TGTTCAAGATTTGCATCGTTGG 58.100 40.909 0.00 0.00 34.17 3.77
168 169 3.317711 TGTTCAAGATTTGCATCGTTGGT 59.682 39.130 0.00 0.00 34.17 3.67
169 170 4.202101 TGTTCAAGATTTGCATCGTTGGTT 60.202 37.500 0.00 0.00 34.17 3.67
170 171 4.582701 TCAAGATTTGCATCGTTGGTTT 57.417 36.364 0.00 0.00 34.17 3.27
171 172 5.697473 TCAAGATTTGCATCGTTGGTTTA 57.303 34.783 0.00 0.00 34.17 2.01
172 173 5.698832 TCAAGATTTGCATCGTTGGTTTAG 58.301 37.500 0.00 0.00 34.17 1.85
173 174 4.701956 AGATTTGCATCGTTGGTTTAGG 57.298 40.909 0.00 0.00 34.17 2.69
174 175 3.443681 AGATTTGCATCGTTGGTTTAGGG 59.556 43.478 0.00 0.00 34.17 3.53
175 176 1.540267 TTGCATCGTTGGTTTAGGGG 58.460 50.000 0.00 0.00 0.00 4.79
176 177 0.402504 TGCATCGTTGGTTTAGGGGT 59.597 50.000 0.00 0.00 0.00 4.95
177 178 1.202952 TGCATCGTTGGTTTAGGGGTT 60.203 47.619 0.00 0.00 0.00 4.11
178 179 1.201414 GCATCGTTGGTTTAGGGGTTG 59.799 52.381 0.00 0.00 0.00 3.77
179 180 1.816224 CATCGTTGGTTTAGGGGTTGG 59.184 52.381 0.00 0.00 0.00 3.77
180 181 0.845337 TCGTTGGTTTAGGGGTTGGT 59.155 50.000 0.00 0.00 0.00 3.67
181 182 1.214923 TCGTTGGTTTAGGGGTTGGTT 59.785 47.619 0.00 0.00 0.00 3.67
182 183 1.338655 CGTTGGTTTAGGGGTTGGTTG 59.661 52.381 0.00 0.00 0.00 3.77
183 184 1.689813 GTTGGTTTAGGGGTTGGTTGG 59.310 52.381 0.00 0.00 0.00 3.77
184 185 1.232909 TGGTTTAGGGGTTGGTTGGA 58.767 50.000 0.00 0.00 0.00 3.53
185 186 1.146152 TGGTTTAGGGGTTGGTTGGAG 59.854 52.381 0.00 0.00 0.00 3.86
186 187 1.254026 GTTTAGGGGTTGGTTGGAGC 58.746 55.000 0.00 0.00 0.00 4.70
187 188 0.854218 TTTAGGGGTTGGTTGGAGCA 59.146 50.000 0.00 0.00 0.00 4.26
188 189 0.854218 TTAGGGGTTGGTTGGAGCAA 59.146 50.000 0.00 0.00 32.60 3.91
189 190 0.854218 TAGGGGTTGGTTGGAGCAAA 59.146 50.000 0.00 0.00 37.34 3.68
190 191 0.759060 AGGGGTTGGTTGGAGCAAAC 60.759 55.000 0.00 0.00 42.18 2.93
191 192 1.362355 GGGTTGGTTGGAGCAAACG 59.638 57.895 2.31 0.00 43.71 3.60
192 193 1.388837 GGGTTGGTTGGAGCAAACGT 61.389 55.000 2.31 0.00 43.71 3.99
193 194 0.458260 GGTTGGTTGGAGCAAACGTT 59.542 50.000 0.00 0.00 37.34 3.99
194 195 1.134936 GGTTGGTTGGAGCAAACGTTT 60.135 47.619 7.96 7.96 37.34 3.60
195 196 2.612604 GTTGGTTGGAGCAAACGTTTT 58.387 42.857 11.66 0.00 37.34 2.43
196 197 2.285827 TGGTTGGAGCAAACGTTTTG 57.714 45.000 11.66 8.34 33.14 2.44
197 198 0.927537 GGTTGGAGCAAACGTTTTGC 59.072 50.000 20.59 20.59 45.22 3.68
204 205 2.283799 GCAAACGTTTTGCAGCATTC 57.716 45.000 22.20 0.00 44.34 2.67
205 206 1.395820 GCAAACGTTTTGCAGCATTCG 60.396 47.619 22.20 4.37 44.34 3.34
206 207 0.852136 AAACGTTTTGCAGCATTCGC 59.148 45.000 7.96 0.00 38.99 4.70
234 235 1.279840 GCGGATAGCGAATTGGTGC 59.720 57.895 0.00 0.00 35.41 5.01
235 236 1.160329 GCGGATAGCGAATTGGTGCT 61.160 55.000 0.00 2.44 45.04 4.40
236 237 0.861837 CGGATAGCGAATTGGTGCTC 59.138 55.000 0.10 0.00 42.48 4.26
237 238 1.806247 CGGATAGCGAATTGGTGCTCA 60.806 52.381 0.10 0.00 42.48 4.26
238 239 1.599542 GGATAGCGAATTGGTGCTCAC 59.400 52.381 0.10 0.00 42.48 3.51
239 240 2.279741 GATAGCGAATTGGTGCTCACA 58.720 47.619 2.21 0.00 42.48 3.58
240 241 2.177394 TAGCGAATTGGTGCTCACAA 57.823 45.000 2.21 0.00 42.48 3.33
241 242 0.877071 AGCGAATTGGTGCTCACAAG 59.123 50.000 2.21 0.00 36.53 3.16
242 243 0.874390 GCGAATTGGTGCTCACAAGA 59.126 50.000 2.21 0.00 0.00 3.02
243 244 1.135859 GCGAATTGGTGCTCACAAGAG 60.136 52.381 2.21 0.00 44.96 2.85
244 245 2.146342 CGAATTGGTGCTCACAAGAGT 58.854 47.619 2.21 0.00 44.00 3.24
245 246 2.549754 CGAATTGGTGCTCACAAGAGTT 59.450 45.455 2.21 0.00 44.00 3.01
246 247 3.607775 CGAATTGGTGCTCACAAGAGTTG 60.608 47.826 2.21 0.00 44.00 3.16
247 248 1.024271 TTGGTGCTCACAAGAGTTGC 58.976 50.000 2.21 0.00 44.00 4.17
248 249 0.819259 TGGTGCTCACAAGAGTTGCC 60.819 55.000 2.21 0.00 44.00 4.52
249 250 0.819259 GGTGCTCACAAGAGTTGCCA 60.819 55.000 2.21 0.00 44.00 4.92
250 251 0.308993 GTGCTCACAAGAGTTGCCAC 59.691 55.000 0.00 0.00 44.00 5.01
251 252 0.107263 TGCTCACAAGAGTTGCCACA 60.107 50.000 0.00 0.00 44.00 4.17
252 253 0.308993 GCTCACAAGAGTTGCCACAC 59.691 55.000 0.00 0.00 44.00 3.82
253 254 1.959042 CTCACAAGAGTTGCCACACT 58.041 50.000 0.00 0.00 37.11 3.55
254 255 1.869767 CTCACAAGAGTTGCCACACTC 59.130 52.381 0.54 0.54 43.26 3.51
255 256 1.209261 TCACAAGAGTTGCCACACTCA 59.791 47.619 9.70 0.00 45.08 3.41
256 257 2.158769 TCACAAGAGTTGCCACACTCAT 60.159 45.455 9.70 0.00 45.08 2.90
257 258 2.031420 CACAAGAGTTGCCACACTCATG 60.031 50.000 9.70 9.87 45.08 3.07
258 259 2.224606 CAAGAGTTGCCACACTCATGT 58.775 47.619 9.70 0.00 45.08 3.21
273 274 1.726248 TCATGTGTTGAGATTCGTGCG 59.274 47.619 0.00 0.00 0.00 5.34
274 275 1.726248 CATGTGTTGAGATTCGTGCGA 59.274 47.619 0.00 0.00 0.00 5.10
275 276 1.418373 TGTGTTGAGATTCGTGCGAG 58.582 50.000 0.00 0.00 0.00 5.03
276 277 0.716108 GTGTTGAGATTCGTGCGAGG 59.284 55.000 0.00 0.00 0.00 4.63
277 278 0.601057 TGTTGAGATTCGTGCGAGGA 59.399 50.000 0.00 0.00 0.00 3.71
278 279 1.272781 GTTGAGATTCGTGCGAGGAG 58.727 55.000 0.00 0.00 0.00 3.69
279 280 1.135373 GTTGAGATTCGTGCGAGGAGA 60.135 52.381 0.00 0.00 0.00 3.71
280 281 1.393603 TGAGATTCGTGCGAGGAGAT 58.606 50.000 0.00 0.00 0.00 2.75
281 282 1.335182 TGAGATTCGTGCGAGGAGATC 59.665 52.381 0.00 0.00 0.00 2.75
290 291 3.829048 GAGGAGATCGGACGCAGA 58.171 61.111 0.00 0.00 0.00 4.26
291 292 2.107705 GAGGAGATCGGACGCAGAA 58.892 57.895 0.00 0.00 0.00 3.02
292 293 0.030101 GAGGAGATCGGACGCAGAAG 59.970 60.000 0.00 0.00 0.00 2.85
293 294 0.394488 AGGAGATCGGACGCAGAAGA 60.394 55.000 0.00 0.00 0.00 2.87
294 295 0.671251 GGAGATCGGACGCAGAAGAT 59.329 55.000 0.00 0.00 0.00 2.40
295 296 1.601663 GGAGATCGGACGCAGAAGATG 60.602 57.143 0.00 0.00 0.00 2.90
296 297 0.387202 AGATCGGACGCAGAAGATGG 59.613 55.000 0.00 0.00 0.00 3.51
297 298 1.218230 GATCGGACGCAGAAGATGGC 61.218 60.000 0.00 0.00 0.00 4.40
303 304 2.401195 GCAGAAGATGGCGTTCGC 59.599 61.111 8.75 8.75 0.00 4.70
304 305 2.103042 GCAGAAGATGGCGTTCGCT 61.103 57.895 16.40 0.00 0.00 4.93
305 306 2.002127 CAGAAGATGGCGTTCGCTC 58.998 57.895 16.40 7.62 0.00 5.03
306 307 0.737367 CAGAAGATGGCGTTCGCTCA 60.737 55.000 16.40 12.70 0.00 4.26
307 308 0.459237 AGAAGATGGCGTTCGCTCAG 60.459 55.000 16.40 0.00 0.00 3.35
308 309 0.458543 GAAGATGGCGTTCGCTCAGA 60.459 55.000 16.40 0.04 0.00 3.27
309 310 0.037326 AAGATGGCGTTCGCTCAGAA 60.037 50.000 16.40 0.00 36.31 3.02
310 311 0.037326 AGATGGCGTTCGCTCAGAAA 60.037 50.000 16.40 0.00 41.10 2.52
311 312 0.796312 GATGGCGTTCGCTCAGAAAA 59.204 50.000 16.40 0.00 41.10 2.29
312 313 0.517316 ATGGCGTTCGCTCAGAAAAC 59.483 50.000 16.40 0.00 41.10 2.43
313 314 0.531974 TGGCGTTCGCTCAGAAAACT 60.532 50.000 16.40 0.00 41.10 2.66
314 315 0.164002 GGCGTTCGCTCAGAAAACTC 59.836 55.000 16.40 0.00 41.10 3.01
315 316 1.140816 GCGTTCGCTCAGAAAACTCT 58.859 50.000 9.99 0.00 41.10 3.24
316 317 1.527311 GCGTTCGCTCAGAAAACTCTT 59.473 47.619 9.99 0.00 41.10 2.85
317 318 2.410389 GCGTTCGCTCAGAAAACTCTTC 60.410 50.000 9.99 0.00 41.10 2.87
318 319 3.053455 CGTTCGCTCAGAAAACTCTTCT 58.947 45.455 0.00 0.00 41.10 2.85
319 320 3.120451 CGTTCGCTCAGAAAACTCTTCTC 59.880 47.826 0.00 0.00 41.10 2.87
320 321 4.051922 GTTCGCTCAGAAAACTCTTCTCA 58.948 43.478 0.00 0.00 41.10 3.27
321 322 3.906998 TCGCTCAGAAAACTCTTCTCAG 58.093 45.455 0.00 0.00 0.00 3.35
322 323 3.570125 TCGCTCAGAAAACTCTTCTCAGA 59.430 43.478 0.00 0.00 0.00 3.27
323 324 5.791994 TTCGCTCAGAAAACTCTTCTCAGAG 60.792 44.000 0.00 0.00 43.20 3.35
332 333 1.925847 CTCTTCTCAGAGCATGTTCGC 59.074 52.381 3.72 0.00 40.39 4.70
341 342 2.401583 AGCATGTTCGCTCCATAACA 57.598 45.000 0.00 0.00 37.91 2.41
342 343 2.923121 AGCATGTTCGCTCCATAACAT 58.077 42.857 0.00 0.00 44.94 2.71
343 344 3.282021 AGCATGTTCGCTCCATAACATT 58.718 40.909 0.00 0.00 42.22 2.71
344 345 3.313526 AGCATGTTCGCTCCATAACATTC 59.686 43.478 0.00 0.00 42.22 2.67
345 346 3.548818 GCATGTTCGCTCCATAACATTCC 60.549 47.826 0.00 0.00 42.22 3.01
346 347 2.639065 TGTTCGCTCCATAACATTCCC 58.361 47.619 0.00 0.00 30.88 3.97
347 348 1.597663 GTTCGCTCCATAACATTCCCG 59.402 52.381 0.00 0.00 0.00 5.14
348 349 1.116308 TCGCTCCATAACATTCCCGA 58.884 50.000 0.00 0.00 0.00 5.14
349 350 1.691976 TCGCTCCATAACATTCCCGAT 59.308 47.619 0.00 0.00 0.00 4.18
350 351 2.894765 TCGCTCCATAACATTCCCGATA 59.105 45.455 0.00 0.00 0.00 2.92
351 352 3.322541 TCGCTCCATAACATTCCCGATAA 59.677 43.478 0.00 0.00 0.00 1.75
352 353 4.062293 CGCTCCATAACATTCCCGATAAA 58.938 43.478 0.00 0.00 0.00 1.40
353 354 4.513692 CGCTCCATAACATTCCCGATAAAA 59.486 41.667 0.00 0.00 0.00 1.52
354 355 5.181245 CGCTCCATAACATTCCCGATAAAAT 59.819 40.000 0.00 0.00 0.00 1.82
355 356 6.293955 CGCTCCATAACATTCCCGATAAAATT 60.294 38.462 0.00 0.00 0.00 1.82
356 357 7.433680 GCTCCATAACATTCCCGATAAAATTT 58.566 34.615 0.00 0.00 0.00 1.82
357 358 8.573035 GCTCCATAACATTCCCGATAAAATTTA 58.427 33.333 0.00 0.00 0.00 1.40
358 359 9.893305 CTCCATAACATTCCCGATAAAATTTAC 57.107 33.333 0.00 0.00 0.00 2.01
359 360 8.561212 TCCATAACATTCCCGATAAAATTTACG 58.439 33.333 0.00 0.00 0.00 3.18
360 361 7.806014 CCATAACATTCCCGATAAAATTTACGG 59.194 37.037 18.20 18.20 44.16 4.02
361 362 8.561212 CATAACATTCCCGATAAAATTTACGGA 58.439 33.333 23.40 9.80 46.94 4.69
362 363 7.393841 AACATTCCCGATAAAATTTACGGAA 57.606 32.000 23.40 15.76 46.94 4.30
363 364 7.576861 ACATTCCCGATAAAATTTACGGAAT 57.423 32.000 23.40 16.85 46.94 3.01
364 365 8.002984 ACATTCCCGATAAAATTTACGGAATT 57.997 30.769 23.40 10.88 46.94 2.17
365 366 7.918562 ACATTCCCGATAAAATTTACGGAATTG 59.081 33.333 23.40 19.14 46.94 2.32
366 367 5.823353 TCCCGATAAAATTTACGGAATTGC 58.177 37.500 23.40 0.00 46.94 3.56
367 368 4.979815 CCCGATAAAATTTACGGAATTGCC 59.020 41.667 23.40 0.00 46.94 4.52
368 369 5.221165 CCCGATAAAATTTACGGAATTGCCT 60.221 40.000 23.40 0.00 46.94 4.75
369 370 5.912955 CCGATAAAATTTACGGAATTGCCTC 59.087 40.000 19.56 0.00 46.94 4.70
370 371 6.459024 CCGATAAAATTTACGGAATTGCCTCA 60.459 38.462 19.56 0.00 46.94 3.86
371 372 7.138736 CGATAAAATTTACGGAATTGCCTCAT 58.861 34.615 0.00 0.00 37.98 2.90
372 373 8.286800 CGATAAAATTTACGGAATTGCCTCATA 58.713 33.333 0.00 0.00 37.98 2.15
376 377 6.721571 ATTTACGGAATTGCCTCATATACG 57.278 37.500 0.00 0.00 0.00 3.06
377 378 5.456548 TTACGGAATTGCCTCATATACGA 57.543 39.130 0.00 0.00 0.00 3.43
378 379 4.537135 ACGGAATTGCCTCATATACGAT 57.463 40.909 0.00 0.00 0.00 3.73
379 380 4.245660 ACGGAATTGCCTCATATACGATG 58.754 43.478 0.00 0.00 0.00 3.84
380 381 4.021456 ACGGAATTGCCTCATATACGATGA 60.021 41.667 0.00 0.00 0.00 2.92
381 382 4.929211 CGGAATTGCCTCATATACGATGAA 59.071 41.667 0.00 0.00 0.00 2.57
382 383 5.408299 CGGAATTGCCTCATATACGATGAAA 59.592 40.000 0.00 0.00 0.00 2.69
383 384 6.401474 CGGAATTGCCTCATATACGATGAAAG 60.401 42.308 0.00 0.00 0.00 2.62
384 385 5.869753 ATTGCCTCATATACGATGAAAGC 57.130 39.130 0.00 0.00 0.00 3.51
385 386 4.607293 TGCCTCATATACGATGAAAGCT 57.393 40.909 0.00 0.00 32.07 3.74
386 387 4.560128 TGCCTCATATACGATGAAAGCTC 58.440 43.478 0.00 0.00 32.07 4.09
387 388 3.610242 GCCTCATATACGATGAAAGCTCG 59.390 47.826 0.00 0.00 41.77 5.03
389 390 4.854291 CCTCATATACGATGAAAGCTCGTC 59.146 45.833 0.82 0.00 45.63 4.20
390 391 4.795268 TCATATACGATGAAAGCTCGTCC 58.205 43.478 0.82 0.00 45.63 4.79
391 392 2.121116 ATACGATGAAAGCTCGTCCG 57.879 50.000 0.82 0.00 45.63 4.79
392 393 1.089112 TACGATGAAAGCTCGTCCGA 58.911 50.000 0.82 0.00 45.63 4.55
393 394 0.456221 ACGATGAAAGCTCGTCCGAT 59.544 50.000 0.00 0.00 45.63 4.18
394 395 1.135083 ACGATGAAAGCTCGTCCGATT 60.135 47.619 0.00 0.00 45.63 3.34
395 396 1.927174 CGATGAAAGCTCGTCCGATTT 59.073 47.619 0.00 0.00 34.54 2.17
396 397 2.285256 CGATGAAAGCTCGTCCGATTTG 60.285 50.000 0.00 0.00 34.54 2.32
397 398 1.438651 TGAAAGCTCGTCCGATTTGG 58.561 50.000 0.00 0.00 40.09 3.28
398 399 1.270625 TGAAAGCTCGTCCGATTTGGT 60.271 47.619 0.00 0.00 39.52 3.67
399 400 2.028839 TGAAAGCTCGTCCGATTTGGTA 60.029 45.455 0.00 0.00 39.52 3.25
400 401 2.005971 AAGCTCGTCCGATTTGGTAC 57.994 50.000 0.00 0.00 39.52 3.34
401 402 0.179145 AGCTCGTCCGATTTGGTACG 60.179 55.000 8.00 8.00 40.43 3.67
402 403 0.179156 GCTCGTCCGATTTGGTACGA 60.179 55.000 13.49 13.49 43.32 3.43
403 404 1.535437 GCTCGTCCGATTTGGTACGAT 60.535 52.381 14.16 0.00 43.96 3.73
404 405 2.287188 GCTCGTCCGATTTGGTACGATA 60.287 50.000 14.16 0.12 43.96 2.92
405 406 3.552541 CTCGTCCGATTTGGTACGATAG 58.447 50.000 14.16 4.86 43.96 2.08
406 407 2.945008 TCGTCCGATTTGGTACGATAGT 59.055 45.455 11.33 0.00 46.00 2.12
407 408 3.040795 CGTCCGATTTGGTACGATAGTG 58.959 50.000 8.42 0.00 44.29 2.74
418 419 3.362581 CGATAGTGCAATCCACCGT 57.637 52.632 0.00 0.00 45.83 4.83
419 420 0.930310 CGATAGTGCAATCCACCGTG 59.070 55.000 0.00 0.00 45.83 4.94
420 421 1.470805 CGATAGTGCAATCCACCGTGA 60.471 52.381 0.00 0.00 45.83 4.35
421 422 2.627945 GATAGTGCAATCCACCGTGAA 58.372 47.619 0.00 0.00 45.83 3.18
422 423 1.803334 TAGTGCAATCCACCGTGAAC 58.197 50.000 0.00 0.00 45.83 3.18
423 424 0.889186 AGTGCAATCCACCGTGAACC 60.889 55.000 0.00 0.00 45.83 3.62
424 425 1.602323 TGCAATCCACCGTGAACCC 60.602 57.895 0.00 0.00 0.00 4.11
425 426 1.602323 GCAATCCACCGTGAACCCA 60.602 57.895 0.00 0.00 0.00 4.51
426 427 1.862602 GCAATCCACCGTGAACCCAC 61.863 60.000 0.00 0.00 39.86 4.61
427 428 1.074248 AATCCACCGTGAACCCACC 59.926 57.895 0.00 0.00 40.12 4.61
428 429 1.423794 AATCCACCGTGAACCCACCT 61.424 55.000 0.00 0.00 40.12 4.00
429 430 1.423794 ATCCACCGTGAACCCACCTT 61.424 55.000 0.00 0.00 40.12 3.50
430 431 1.896660 CCACCGTGAACCCACCTTG 60.897 63.158 0.00 0.00 40.12 3.61
431 432 1.147376 CACCGTGAACCCACCTTGA 59.853 57.895 0.00 0.00 40.12 3.02
432 433 0.884704 CACCGTGAACCCACCTTGAG 60.885 60.000 0.00 0.00 40.12 3.02
433 434 1.966451 CCGTGAACCCACCTTGAGC 60.966 63.158 0.00 0.00 40.12 4.26
434 435 1.227823 CGTGAACCCACCTTGAGCA 60.228 57.895 0.00 0.00 40.12 4.26
435 436 0.817634 CGTGAACCCACCTTGAGCAA 60.818 55.000 0.00 0.00 40.12 3.91
436 437 0.954452 GTGAACCCACCTTGAGCAAG 59.046 55.000 3.27 3.27 37.33 4.01
437 438 0.823356 TGAACCCACCTTGAGCAAGC 60.823 55.000 4.72 0.00 37.11 4.01
438 439 1.856265 GAACCCACCTTGAGCAAGCG 61.856 60.000 4.72 1.75 37.11 4.68
439 440 2.281761 CCCACCTTGAGCAAGCGT 60.282 61.111 4.72 2.32 37.11 5.07
440 441 1.898574 CCCACCTTGAGCAAGCGTT 60.899 57.895 4.72 0.00 37.11 4.84
441 442 1.283793 CCACCTTGAGCAAGCGTTG 59.716 57.895 4.72 2.18 37.11 4.10
442 443 1.165907 CCACCTTGAGCAAGCGTTGA 61.166 55.000 4.72 0.00 37.11 3.18
443 444 0.877071 CACCTTGAGCAAGCGTTGAT 59.123 50.000 4.72 0.00 37.11 2.57
444 445 1.135859 CACCTTGAGCAAGCGTTGATC 60.136 52.381 4.72 8.43 45.81 2.92
455 456 3.274067 GTTGATCAACGGTGGCCC 58.726 61.111 22.09 0.00 0.00 5.80
456 457 1.303317 GTTGATCAACGGTGGCCCT 60.303 57.895 22.09 0.00 0.00 5.19
457 458 1.303236 TTGATCAACGGTGGCCCTG 60.303 57.895 3.38 0.00 0.00 4.45
458 459 3.134127 GATCAACGGTGGCCCTGC 61.134 66.667 0.00 0.00 0.00 4.85
459 460 3.628646 GATCAACGGTGGCCCTGCT 62.629 63.158 0.00 0.00 0.00 4.24
460 461 2.252072 GATCAACGGTGGCCCTGCTA 62.252 60.000 0.00 0.00 0.00 3.49
461 462 2.536997 ATCAACGGTGGCCCTGCTAC 62.537 60.000 0.00 0.00 39.31 3.58
462 463 2.928396 AACGGTGGCCCTGCTACT 60.928 61.111 0.00 0.00 39.93 2.57
463 464 2.526046 AACGGTGGCCCTGCTACTT 61.526 57.895 0.00 0.00 39.93 2.24
464 465 2.125106 CGGTGGCCCTGCTACTTC 60.125 66.667 0.00 0.00 39.93 3.01
465 466 2.125106 GGTGGCCCTGCTACTTCG 60.125 66.667 0.00 0.00 39.93 3.79
466 467 2.663196 GTGGCCCTGCTACTTCGT 59.337 61.111 0.00 0.00 37.08 3.85
467 468 1.610554 GGTGGCCCTGCTACTTCGTA 61.611 60.000 0.00 0.00 39.93 3.43
468 469 0.459759 GTGGCCCTGCTACTTCGTAC 60.460 60.000 0.00 0.00 37.08 3.67
469 470 0.901114 TGGCCCTGCTACTTCGTACA 60.901 55.000 0.00 0.00 0.00 2.90
470 471 0.179108 GGCCCTGCTACTTCGTACAG 60.179 60.000 0.00 0.00 0.00 2.74
471 472 0.815734 GCCCTGCTACTTCGTACAGA 59.184 55.000 0.00 0.00 31.67 3.41
472 473 1.203994 GCCCTGCTACTTCGTACAGAA 59.796 52.381 0.00 0.00 37.31 3.02
473 474 2.353406 GCCCTGCTACTTCGTACAGAAA 60.353 50.000 0.00 0.00 38.57 2.52
474 475 3.679083 GCCCTGCTACTTCGTACAGAAAT 60.679 47.826 0.00 0.00 38.57 2.17
475 476 4.113354 CCCTGCTACTTCGTACAGAAATC 58.887 47.826 0.00 0.00 38.57 2.17
476 477 4.381612 CCCTGCTACTTCGTACAGAAATCA 60.382 45.833 0.00 0.00 38.57 2.57
477 478 5.352284 CCTGCTACTTCGTACAGAAATCAT 58.648 41.667 0.00 0.00 38.57 2.45
478 479 6.461092 CCCTGCTACTTCGTACAGAAATCATA 60.461 42.308 0.00 0.00 38.57 2.15
479 480 6.418226 CCTGCTACTTCGTACAGAAATCATAC 59.582 42.308 0.00 0.00 38.57 2.39
480 481 6.859017 TGCTACTTCGTACAGAAATCATACA 58.141 36.000 0.00 0.00 38.57 2.29
481 482 7.317390 TGCTACTTCGTACAGAAATCATACAA 58.683 34.615 0.00 0.00 38.57 2.41
482 483 7.815549 TGCTACTTCGTACAGAAATCATACAAA 59.184 33.333 0.00 0.00 38.57 2.83
483 484 8.818057 GCTACTTCGTACAGAAATCATACAAAT 58.182 33.333 0.00 0.00 38.57 2.32
486 487 9.871238 ACTTCGTACAGAAATCATACAAATACT 57.129 29.630 0.00 0.00 38.57 2.12
488 489 9.647797 TTCGTACAGAAATCATACAAATACTGT 57.352 29.630 0.00 0.00 37.74 3.55
489 490 9.297586 TCGTACAGAAATCATACAAATACTGTC 57.702 33.333 0.00 0.00 39.64 3.51
490 491 8.259872 CGTACAGAAATCATACAAATACTGTCG 58.740 37.037 0.00 0.00 39.64 4.35
491 492 9.084164 GTACAGAAATCATACAAATACTGTCGT 57.916 33.333 0.00 0.00 39.64 4.34
493 494 9.817809 ACAGAAATCATACAAATACTGTCGTAT 57.182 29.630 0.00 0.00 39.64 3.06
495 496 9.817809 AGAAATCATACAAATACTGTCGTATGT 57.182 29.630 14.12 6.59 41.18 2.29
496 497 9.849607 GAAATCATACAAATACTGTCGTATGTG 57.150 33.333 14.12 2.03 43.85 3.21
502 503 6.641176 CAAATACTGTCGTATGTGTAGCAA 57.359 37.500 0.00 0.00 36.83 3.91
503 504 6.466812 CAAATACTGTCGTATGTGTAGCAAC 58.533 40.000 0.00 0.00 36.83 4.17
504 505 2.592194 ACTGTCGTATGTGTAGCAACG 58.408 47.619 0.00 0.00 34.96 4.10
505 506 1.320555 CTGTCGTATGTGTAGCAACGC 59.679 52.381 0.00 0.00 34.25 4.84
506 507 1.068125 TGTCGTATGTGTAGCAACGCT 60.068 47.619 0.00 0.00 43.41 5.07
507 508 1.582502 GTCGTATGTGTAGCAACGCTC 59.417 52.381 0.00 0.00 40.44 5.03
508 509 1.471287 TCGTATGTGTAGCAACGCTCT 59.529 47.619 0.00 0.00 40.44 4.09
509 510 2.679336 TCGTATGTGTAGCAACGCTCTA 59.321 45.455 0.00 0.00 40.44 2.43
510 511 3.127376 TCGTATGTGTAGCAACGCTCTAA 59.873 43.478 0.00 0.00 40.44 2.10
511 512 3.855379 CGTATGTGTAGCAACGCTCTAAA 59.145 43.478 0.00 0.00 40.44 1.85
512 513 4.325204 CGTATGTGTAGCAACGCTCTAAAA 59.675 41.667 0.00 0.00 40.44 1.52
543 544 8.301252 AGATAACACTTTTTGTAAGGGTGTTT 57.699 30.769 13.52 4.20 45.04 2.83
614 618 1.734163 ACCGAGGCTATTTTTGTCCG 58.266 50.000 0.00 0.00 0.00 4.79
739 748 2.040114 GGTAACTCCCGTCCCCCT 59.960 66.667 0.00 0.00 0.00 4.79
740 749 2.062777 GGTAACTCCCGTCCCCCTC 61.063 68.421 0.00 0.00 0.00 4.30
741 750 2.062777 GTAACTCCCGTCCCCCTCC 61.063 68.421 0.00 0.00 0.00 4.30
742 751 3.321901 TAACTCCCGTCCCCCTCCC 62.322 68.421 0.00 0.00 0.00 4.30
744 753 4.862823 CTCCCGTCCCCCTCCCTC 62.863 77.778 0.00 0.00 0.00 4.30
976 999 3.454573 CGTCGGATTCGTGGGGGA 61.455 66.667 0.00 0.00 37.69 4.81
977 1000 2.186125 GTCGGATTCGTGGGGGAC 59.814 66.667 0.00 0.00 37.69 4.46
1413 1466 1.205893 CTCGTGAAGAAGAAGAGGGGG 59.794 57.143 0.00 0.00 0.00 5.40
1414 1467 0.391793 CGTGAAGAAGAAGAGGGGGC 60.392 60.000 0.00 0.00 0.00 5.80
1851 1965 1.001633 TCAGGTCTTCGGTTGCCTTAC 59.998 52.381 0.00 0.00 0.00 2.34
1968 2140 8.465273 AGATAAAAGGGTGGTAAATATTCTGC 57.535 34.615 0.00 0.00 0.00 4.26
1969 2141 5.932619 AAAAGGGTGGTAAATATTCTGCC 57.067 39.130 0.00 0.00 0.00 4.85
1970 2142 4.601406 AAGGGTGGTAAATATTCTGCCA 57.399 40.909 0.00 0.00 0.00 4.92
1971 2143 4.601406 AGGGTGGTAAATATTCTGCCAA 57.399 40.909 8.31 0.00 0.00 4.52
1972 2144 5.142806 AGGGTGGTAAATATTCTGCCAAT 57.857 39.130 8.31 0.00 0.00 3.16
1973 2145 5.528337 AGGGTGGTAAATATTCTGCCAATT 58.472 37.500 8.31 0.00 0.00 2.32
1974 2146 5.598417 AGGGTGGTAAATATTCTGCCAATTC 59.402 40.000 8.31 3.92 0.00 2.17
1975 2147 5.362430 GGGTGGTAAATATTCTGCCAATTCA 59.638 40.000 8.31 0.00 0.00 2.57
1976 2148 6.127196 GGGTGGTAAATATTCTGCCAATTCAA 60.127 38.462 8.31 0.00 0.00 2.69
1977 2149 7.418942 GGGTGGTAAATATTCTGCCAATTCAAT 60.419 37.037 8.31 0.00 0.00 2.57
1978 2150 7.986889 GGTGGTAAATATTCTGCCAATTCAATT 59.013 33.333 8.31 0.00 0.00 2.32
2023 2226 9.686683 GGGCAATATAGGAGTATCATGTTAATT 57.313 33.333 0.00 0.00 36.25 1.40
2065 2269 6.633500 TTATAATTCGATGGCCTTCTTTGG 57.367 37.500 16.03 1.45 0.00 3.28
2184 2388 5.509832 AGGTACTCCCTCGGTTTTTATTT 57.490 39.130 0.00 0.00 40.71 1.40
2185 2389 6.625532 AGGTACTCCCTCGGTTTTTATTTA 57.374 37.500 0.00 0.00 40.71 1.40
2186 2390 6.409704 AGGTACTCCCTCGGTTTTTATTTAC 58.590 40.000 0.00 0.00 40.71 2.01
2187 2391 6.214208 AGGTACTCCCTCGGTTTTTATTTACT 59.786 38.462 0.00 0.00 40.71 2.24
2188 2392 6.536582 GGTACTCCCTCGGTTTTTATTTACTC 59.463 42.308 0.00 0.00 0.00 2.59
2189 2393 6.370186 ACTCCCTCGGTTTTTATTTACTCT 57.630 37.500 0.00 0.00 0.00 3.24
2190 2394 6.171213 ACTCCCTCGGTTTTTATTTACTCTG 58.829 40.000 0.00 0.00 0.00 3.35
2212 2416 5.118990 TGCATATTAGAGTTGGCTGAAGTC 58.881 41.667 0.00 0.00 34.56 3.01
2456 2660 2.021723 GCTCCGTCCTCTCTGATGTCT 61.022 57.143 0.00 0.00 0.00 3.41
2831 3049 0.179702 GCTGCTGATCCACAGGATGA 59.820 55.000 2.74 0.00 45.30 2.92
2868 3086 9.498176 TCTTAAAGGATGGTCTTACAAAACTAC 57.502 33.333 0.00 0.00 0.00 2.73
2869 3087 9.503399 CTTAAAGGATGGTCTTACAAAACTACT 57.497 33.333 0.00 0.00 0.00 2.57
2872 3090 7.793948 AGGATGGTCTTACAAAACTACTAGT 57.206 36.000 0.00 0.00 0.00 2.57
2873 3091 8.890410 AGGATGGTCTTACAAAACTACTAGTA 57.110 34.615 1.89 1.89 0.00 1.82
2918 3136 2.693591 TGTCGGTTCTATCTTAGGCTGG 59.306 50.000 0.00 0.00 0.00 4.85
2919 3137 2.957006 GTCGGTTCTATCTTAGGCTGGA 59.043 50.000 0.00 0.00 0.00 3.86
2920 3138 3.574826 GTCGGTTCTATCTTAGGCTGGAT 59.425 47.826 0.00 3.61 0.00 3.41
2921 3139 4.039366 GTCGGTTCTATCTTAGGCTGGATT 59.961 45.833 0.00 0.00 0.00 3.01
2935 3156 0.181114 TGGATTCCATTCTCCTGGCG 59.819 55.000 0.00 0.00 36.16 5.69
2973 3194 6.653020 TGTCATTATTCTGCAGTACCAATCT 58.347 36.000 14.67 0.00 0.00 2.40
2983 3204 3.643792 GCAGTACCAATCTACATCCTCCT 59.356 47.826 0.00 0.00 0.00 3.69
2986 3207 6.183360 GCAGTACCAATCTACATCCTCCTTTA 60.183 42.308 0.00 0.00 0.00 1.85
3003 3224 9.784531 TCCTCCTTTAATAGATATTTGCTGAAG 57.215 33.333 0.00 0.00 0.00 3.02
3004 3225 9.566432 CCTCCTTTAATAGATATTTGCTGAAGT 57.434 33.333 0.00 0.00 0.00 3.01
3015 3236 4.519540 TTTGCTGAAGTTATTCCTTGCC 57.480 40.909 0.00 0.00 34.28 4.52
3026 3247 0.846427 TTCCTTGCCTGTCCCTGGAT 60.846 55.000 0.00 0.00 0.00 3.41
3075 3305 6.291796 GGCGTTTATGCTTTAAATCATCTTGC 60.292 38.462 7.77 8.31 34.52 4.01
3294 3524 9.528018 CTTGTTATTTTTGTGAAGTGGTAATGT 57.472 29.630 0.00 0.00 0.00 2.71
3348 3661 3.262151 TGTCAACGGACCTATGATTTGGA 59.738 43.478 0.08 0.00 43.65 3.53
3385 3698 0.036952 TTCTGTAGCCTGCACTCTGC 60.037 55.000 0.00 0.00 45.29 4.26
3450 3888 5.014808 ACAAATTAAGCCTATACGGTCGT 57.985 39.130 0.69 0.69 34.25 4.34
3502 3942 4.124238 TCTGTTTCCGTTACTTCCTTGTG 58.876 43.478 0.00 0.00 0.00 3.33
3575 4032 8.275015 TGTTTATCTTGTCTGTTCTTGTGAAA 57.725 30.769 0.00 0.00 33.52 2.69
3587 4048 8.370940 TCTGTTCTTGTGAAAATAGTCTCTGAT 58.629 33.333 0.00 0.00 33.52 2.90
3590 4051 9.160496 GTTCTTGTGAAAATAGTCTCTGATGAT 57.840 33.333 0.00 0.00 33.52 2.45
3633 4095 5.381757 TGCAGTTTAAGTTTACATCCCAGT 58.618 37.500 0.00 0.00 0.00 4.00
3659 4121 7.326968 TGTCAAGTTACATGAAAACATGTCA 57.673 32.000 17.11 13.63 43.89 3.58
3689 4154 9.880157 AATTTAATCTGTTTTCATTCTCCCATG 57.120 29.630 0.00 0.00 0.00 3.66
3691 4156 8.827832 TTAATCTGTTTTCATTCTCCCATGAT 57.172 30.769 0.00 0.00 33.07 2.45
3692 4157 9.919416 TTAATCTGTTTTCATTCTCCCATGATA 57.081 29.630 0.00 0.00 33.07 2.15
3693 4158 8.827832 AATCTGTTTTCATTCTCCCATGATAA 57.172 30.769 0.00 0.00 33.07 1.75
3694 4159 8.827832 ATCTGTTTTCATTCTCCCATGATAAA 57.172 30.769 0.00 0.00 33.07 1.40
3695 4160 8.827832 TCTGTTTTCATTCTCCCATGATAAAT 57.172 30.769 0.00 0.00 33.07 1.40
3696 4161 8.689061 TCTGTTTTCATTCTCCCATGATAAATG 58.311 33.333 0.00 0.00 33.07 2.32
3697 4162 8.365060 TGTTTTCATTCTCCCATGATAAATGT 57.635 30.769 0.00 0.00 33.07 2.71
3698 4163 8.469200 TGTTTTCATTCTCCCATGATAAATGTC 58.531 33.333 0.00 0.00 33.07 3.06
3699 4164 8.689972 GTTTTCATTCTCCCATGATAAATGTCT 58.310 33.333 0.00 0.00 33.07 3.41
3700 4165 9.919416 TTTTCATTCTCCCATGATAAATGTCTA 57.081 29.630 0.00 0.00 33.07 2.59
3701 4166 9.919416 TTTCATTCTCCCATGATAAATGTCTAA 57.081 29.630 0.00 0.00 33.07 2.10
3814 4279 7.817962 ACAGAGTCACACCACATTACTTAATAC 59.182 37.037 0.00 0.00 0.00 1.89
3816 4281 8.035394 AGAGTCACACCACATTACTTAATACTG 58.965 37.037 0.00 0.00 0.00 2.74
3842 4307 5.747675 TGTAATGCAATGTCAGTTTTGTGTG 59.252 36.000 0.00 0.00 0.00 3.82
4025 4494 0.396811 ATGGGCGTATTGTAGGAGGC 59.603 55.000 0.00 0.00 0.00 4.70
4106 4583 3.701040 ACTTTGTTGTCAACTGGCATCTT 59.299 39.130 16.45 0.00 32.93 2.40
4137 4614 1.613317 TAGGCCATCGGTGACAGGTG 61.613 60.000 5.01 0.00 0.00 4.00
4178 4655 2.437359 GTGGGCAGCTTCATCGCT 60.437 61.111 0.00 0.00 41.90 4.93
4223 4700 4.084888 CAACCGAAACGCGAGCCC 62.085 66.667 15.93 0.00 44.57 5.19
4231 4708 2.731691 AAACGCGAGCCCACATCTGT 62.732 55.000 15.93 0.00 0.00 3.41
4274 4751 4.076244 CAGACTGCTGCTGGCTTT 57.924 55.556 12.63 0.00 42.39 3.51
4280 4757 4.712425 GCTGCTGGCTTTGGTGCG 62.712 66.667 0.00 0.00 38.06 5.34
4331 4808 0.524392 CATCGAGCGACCACTCTGAC 60.524 60.000 0.00 0.00 34.35 3.51
4391 4868 1.452651 CAATGCAGGCCATCCGACT 60.453 57.895 5.01 0.00 37.47 4.18
4424 4901 4.047125 CCGGTGGGCTGGTCCATT 62.047 66.667 0.00 0.00 39.26 3.16
4451 4928 3.771160 CAAGGCCGCTACGACCCT 61.771 66.667 0.00 0.00 26.97 4.34
4480 4957 0.180406 ATGGTGACCGACTAATGGCC 59.820 55.000 0.00 0.00 0.00 5.36
4481 4958 0.907704 TGGTGACCGACTAATGGCCT 60.908 55.000 3.32 0.00 0.00 5.19
4485 4963 2.365095 GACCGACTAATGGCCTCCGG 62.365 65.000 3.32 10.14 42.30 5.14
4489 4967 1.137479 CGACTAATGGCCTCCGGTTTA 59.863 52.381 3.32 0.00 0.00 2.01
4499 4977 1.079503 CTCCGGTTTACAGCAGCTTC 58.920 55.000 0.00 0.00 0.00 3.86
4503 4981 2.228822 CCGGTTTACAGCAGCTTCATTT 59.771 45.455 0.00 0.00 0.00 2.32
4505 4983 4.298332 CGGTTTACAGCAGCTTCATTTTT 58.702 39.130 0.00 0.00 0.00 1.94
4646 5124 6.073548 AGCAATAATAAGTAGCATCGTCTTGC 60.074 38.462 0.00 0.00 43.09 4.01
4674 5152 8.964150 CCTGTTATTGTTGCTTTTAGTTTGTAC 58.036 33.333 0.00 0.00 0.00 2.90
4675 5153 8.859517 TGTTATTGTTGCTTTTAGTTTGTACC 57.140 30.769 0.00 0.00 0.00 3.34
4676 5154 7.644551 TGTTATTGTTGCTTTTAGTTTGTACCG 59.355 33.333 0.00 0.00 0.00 4.02
4677 5155 5.564048 TTGTTGCTTTTAGTTTGTACCGT 57.436 34.783 0.00 0.00 0.00 4.83
4678 5156 6.674694 TTGTTGCTTTTAGTTTGTACCGTA 57.325 33.333 0.00 0.00 0.00 4.02
4691 5169 5.449107 TTGTACCGTATCTCTTATCTGCC 57.551 43.478 0.00 0.00 0.00 4.85
4852 5330 0.985490 ATTCAGAGGGCTGGAGGGAC 60.985 60.000 0.00 0.00 42.53 4.46
4857 5335 0.689623 GAGGGCTGGAGGGACATATG 59.310 60.000 0.00 0.00 0.00 1.78
4875 5353 0.912487 TGCTCCGGGAATTACTGGGT 60.912 55.000 16.00 0.00 37.50 4.51
4876 5354 1.125633 GCTCCGGGAATTACTGGGTA 58.874 55.000 16.00 0.00 37.50 3.69
4940 5423 1.871039 CGGATGGCTTTATTACCGTGG 59.129 52.381 0.00 0.00 36.38 4.94
5040 5533 3.770263 TCAGTACCCTGACGTAATTCG 57.230 47.619 0.00 0.00 42.80 3.34
5153 5729 1.000827 CTCACTAGCTCGGCATACAGG 60.001 57.143 0.00 0.00 0.00 4.00
5154 5730 0.598680 CACTAGCTCGGCATACAGGC 60.599 60.000 0.00 0.00 39.93 4.85
5155 5731 1.043116 ACTAGCTCGGCATACAGGCA 61.043 55.000 0.00 0.00 44.47 4.75
5156 5732 0.598680 CTAGCTCGGCATACAGGCAC 60.599 60.000 0.00 0.00 44.47 5.01
5263 6028 5.529791 GAGTTATTCTCCAGCACGCTATAA 58.470 41.667 0.00 0.00 37.22 0.98
5321 6115 1.755179 AGCATAACAAAGCAGCGGAT 58.245 45.000 0.00 0.00 0.00 4.18
5328 6122 1.956477 ACAAAGCAGCGGATGAACTTT 59.044 42.857 0.00 0.00 0.00 2.66
5412 6209 1.586154 CCTTCATTTCAGCGCGGGTT 61.586 55.000 8.83 0.00 0.00 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.541147 CATGGCAATTCTCACCGTTGT 59.459 47.619 0.00 0.00 0.00 3.32
1 2 1.733389 GCATGGCAATTCTCACCGTTG 60.733 52.381 0.00 0.00 0.00 4.10
2 3 0.527565 GCATGGCAATTCTCACCGTT 59.472 50.000 0.00 0.00 0.00 4.44
3 4 0.322816 AGCATGGCAATTCTCACCGT 60.323 50.000 0.00 0.00 0.00 4.83
4 5 1.667236 TAGCATGGCAATTCTCACCG 58.333 50.000 0.00 0.00 0.00 4.94
5 6 4.392940 ACTATAGCATGGCAATTCTCACC 58.607 43.478 0.00 0.00 0.00 4.02
6 7 6.931281 TCTTACTATAGCATGGCAATTCTCAC 59.069 38.462 0.00 0.00 0.00 3.51
7 8 7.066307 TCTTACTATAGCATGGCAATTCTCA 57.934 36.000 0.00 0.00 0.00 3.27
8 9 7.969536 TTCTTACTATAGCATGGCAATTCTC 57.030 36.000 0.00 0.00 0.00 2.87
9 10 7.995488 AGTTTCTTACTATAGCATGGCAATTCT 59.005 33.333 0.00 0.00 34.56 2.40
10 11 8.159344 AGTTTCTTACTATAGCATGGCAATTC 57.841 34.615 0.00 0.00 34.56 2.17
11 12 8.525290 AAGTTTCTTACTATAGCATGGCAATT 57.475 30.769 0.00 0.00 35.54 2.32
12 13 8.525290 AAAGTTTCTTACTATAGCATGGCAAT 57.475 30.769 0.00 0.00 35.54 3.56
13 14 7.609918 TGAAAGTTTCTTACTATAGCATGGCAA 59.390 33.333 16.33 0.00 35.54 4.52
14 15 7.109501 TGAAAGTTTCTTACTATAGCATGGCA 58.890 34.615 16.33 0.00 35.54 4.92
15 16 7.553881 TGAAAGTTTCTTACTATAGCATGGC 57.446 36.000 16.33 0.00 35.54 4.40
19 20 9.314321 GCAGTATGAAAGTTTCTTACTATAGCA 57.686 33.333 29.47 6.37 44.21 3.49
20 21 9.314321 TGCAGTATGAAAGTTTCTTACTATAGC 57.686 33.333 29.47 27.60 44.21 2.97
23 24 9.502091 TGTTGCAGTATGAAAGTTTCTTACTAT 57.498 29.630 29.47 15.86 44.21 2.12
24 25 8.896320 TGTTGCAGTATGAAAGTTTCTTACTA 57.104 30.769 29.47 19.41 44.21 1.82
25 26 7.801716 TGTTGCAGTATGAAAGTTTCTTACT 57.198 32.000 26.70 26.70 45.83 2.24
26 27 7.913297 TGTTGTTGCAGTATGAAAGTTTCTTAC 59.087 33.333 24.11 24.11 31.26 2.34
27 28 7.990917 TGTTGTTGCAGTATGAAAGTTTCTTA 58.009 30.769 16.33 11.45 31.26 2.10
28 29 6.862209 TGTTGTTGCAGTATGAAAGTTTCTT 58.138 32.000 16.33 12.42 31.26 2.52
29 30 6.318648 TCTGTTGTTGCAGTATGAAAGTTTCT 59.681 34.615 16.33 5.22 31.26 2.52
30 31 6.494842 TCTGTTGTTGCAGTATGAAAGTTTC 58.505 36.000 8.75 8.75 31.26 2.78
31 32 6.318648 TCTCTGTTGTTGCAGTATGAAAGTTT 59.681 34.615 0.00 0.00 31.26 2.66
32 33 5.822519 TCTCTGTTGTTGCAGTATGAAAGTT 59.177 36.000 0.00 0.00 31.26 2.66
33 34 5.368145 TCTCTGTTGTTGCAGTATGAAAGT 58.632 37.500 0.00 0.00 31.26 2.66
34 35 5.929697 TCTCTGTTGTTGCAGTATGAAAG 57.070 39.130 0.00 0.00 31.26 2.62
35 36 6.691754 TTTCTCTGTTGTTGCAGTATGAAA 57.308 33.333 0.00 0.00 39.69 2.69
36 37 6.691754 TTTTCTCTGTTGTTGCAGTATGAA 57.308 33.333 0.00 0.00 39.69 2.57
37 38 6.691754 TTTTTCTCTGTTGTTGCAGTATGA 57.308 33.333 0.00 0.00 39.69 2.15
38 39 6.129009 GCATTTTTCTCTGTTGTTGCAGTATG 60.129 38.462 0.00 0.00 37.70 2.39
39 40 5.922544 GCATTTTTCTCTGTTGTTGCAGTAT 59.077 36.000 0.00 0.00 37.70 2.12
40 41 5.280945 GCATTTTTCTCTGTTGTTGCAGTA 58.719 37.500 0.00 0.00 37.70 2.74
41 42 4.114794 GCATTTTTCTCTGTTGTTGCAGT 58.885 39.130 0.00 0.00 37.70 4.40
42 43 3.492011 GGCATTTTTCTCTGTTGTTGCAG 59.508 43.478 0.00 0.00 37.81 4.41
43 44 3.118847 TGGCATTTTTCTCTGTTGTTGCA 60.119 39.130 0.00 0.00 0.00 4.08
44 45 3.245990 GTGGCATTTTTCTCTGTTGTTGC 59.754 43.478 0.00 0.00 0.00 4.17
45 46 4.268405 GTGTGGCATTTTTCTCTGTTGTTG 59.732 41.667 0.00 0.00 0.00 3.33
46 47 4.081752 TGTGTGGCATTTTTCTCTGTTGTT 60.082 37.500 0.00 0.00 0.00 2.83
47 48 3.446873 TGTGTGGCATTTTTCTCTGTTGT 59.553 39.130 0.00 0.00 0.00 3.32
48 49 4.044336 TGTGTGGCATTTTTCTCTGTTG 57.956 40.909 0.00 0.00 0.00 3.33
49 50 4.099881 ACATGTGTGGCATTTTTCTCTGTT 59.900 37.500 0.00 0.00 35.19 3.16
50 51 3.638160 ACATGTGTGGCATTTTTCTCTGT 59.362 39.130 0.00 0.00 35.19 3.41
51 52 4.022589 AGACATGTGTGGCATTTTTCTCTG 60.023 41.667 1.15 0.00 35.06 3.35
52 53 4.147321 AGACATGTGTGGCATTTTTCTCT 58.853 39.130 1.15 0.00 35.06 3.10
53 54 4.022935 TGAGACATGTGTGGCATTTTTCTC 60.023 41.667 1.15 0.00 35.06 2.87
54 55 3.890756 TGAGACATGTGTGGCATTTTTCT 59.109 39.130 1.15 0.00 35.06 2.52
55 56 4.241590 TGAGACATGTGTGGCATTTTTC 57.758 40.909 1.15 0.00 35.06 2.29
56 57 4.877378 ATGAGACATGTGTGGCATTTTT 57.123 36.364 1.15 0.00 35.06 1.94
57 58 4.877378 AATGAGACATGTGTGGCATTTT 57.123 36.364 1.15 0.00 35.06 1.82
58 59 5.981088 TTAATGAGACATGTGTGGCATTT 57.019 34.783 1.15 0.00 35.06 2.32
59 60 5.981088 TTTAATGAGACATGTGTGGCATT 57.019 34.783 1.15 9.03 35.06 3.56
60 61 5.981088 TTTTAATGAGACATGTGTGGCAT 57.019 34.783 1.15 0.00 35.06 4.40
61 62 5.068329 TGTTTTTAATGAGACATGTGTGGCA 59.932 36.000 1.15 0.00 35.06 4.92
62 63 5.527951 TGTTTTTAATGAGACATGTGTGGC 58.472 37.500 1.15 0.00 0.00 5.01
63 64 9.345517 CTAATGTTTTTAATGAGACATGTGTGG 57.654 33.333 1.15 0.00 33.35 4.17
66 67 9.778993 CCTCTAATGTTTTTAATGAGACATGTG 57.221 33.333 1.15 0.00 33.35 3.21
67 68 8.960591 CCCTCTAATGTTTTTAATGAGACATGT 58.039 33.333 0.00 0.00 33.35 3.21
68 69 9.177608 TCCCTCTAATGTTTTTAATGAGACATG 57.822 33.333 0.00 0.00 33.35 3.21
69 70 9.401058 CTCCCTCTAATGTTTTTAATGAGACAT 57.599 33.333 0.00 0.00 34.41 3.06
70 71 7.336931 GCTCCCTCTAATGTTTTTAATGAGACA 59.663 37.037 0.00 0.00 0.00 3.41
71 72 7.201741 GGCTCCCTCTAATGTTTTTAATGAGAC 60.202 40.741 0.00 0.00 0.00 3.36
72 73 6.828785 GGCTCCCTCTAATGTTTTTAATGAGA 59.171 38.462 0.00 0.00 0.00 3.27
73 74 6.238484 CGGCTCCCTCTAATGTTTTTAATGAG 60.238 42.308 0.00 0.00 0.00 2.90
74 75 5.588648 CGGCTCCCTCTAATGTTTTTAATGA 59.411 40.000 0.00 0.00 0.00 2.57
75 76 5.733373 GCGGCTCCCTCTAATGTTTTTAATG 60.733 44.000 0.00 0.00 0.00 1.90
76 77 4.338400 GCGGCTCCCTCTAATGTTTTTAAT 59.662 41.667 0.00 0.00 0.00 1.40
77 78 3.692593 GCGGCTCCCTCTAATGTTTTTAA 59.307 43.478 0.00 0.00 0.00 1.52
78 79 3.275999 GCGGCTCCCTCTAATGTTTTTA 58.724 45.455 0.00 0.00 0.00 1.52
79 80 2.092323 GCGGCTCCCTCTAATGTTTTT 58.908 47.619 0.00 0.00 0.00 1.94
80 81 1.682087 GGCGGCTCCCTCTAATGTTTT 60.682 52.381 0.00 0.00 0.00 2.43
81 82 0.107165 GGCGGCTCCCTCTAATGTTT 60.107 55.000 0.00 0.00 0.00 2.83
82 83 1.271840 TGGCGGCTCCCTCTAATGTT 61.272 55.000 11.43 0.00 0.00 2.71
83 84 1.056700 ATGGCGGCTCCCTCTAATGT 61.057 55.000 11.43 0.00 0.00 2.71
84 85 0.604780 CATGGCGGCTCCCTCTAATG 60.605 60.000 11.43 0.00 0.00 1.90
85 86 0.764369 TCATGGCGGCTCCCTCTAAT 60.764 55.000 11.43 0.00 0.00 1.73
86 87 0.764369 ATCATGGCGGCTCCCTCTAA 60.764 55.000 11.43 0.00 0.00 2.10
87 88 0.114364 TATCATGGCGGCTCCCTCTA 59.886 55.000 11.43 0.00 0.00 2.43
88 89 1.152247 TATCATGGCGGCTCCCTCT 60.152 57.895 11.43 0.00 0.00 3.69
89 90 1.004440 GTATCATGGCGGCTCCCTC 60.004 63.158 11.43 0.00 0.00 4.30
90 91 1.766059 TGTATCATGGCGGCTCCCT 60.766 57.895 11.43 0.00 0.00 4.20
91 92 1.598130 GTGTATCATGGCGGCTCCC 60.598 63.158 11.43 0.00 0.00 4.30
92 93 0.250467 ATGTGTATCATGGCGGCTCC 60.250 55.000 11.43 0.00 35.19 4.70
93 94 2.029020 TCTATGTGTATCATGGCGGCTC 60.029 50.000 11.43 0.00 37.91 4.70
94 95 1.970640 TCTATGTGTATCATGGCGGCT 59.029 47.619 11.43 0.00 37.91 5.52
95 96 2.455674 TCTATGTGTATCATGGCGGC 57.544 50.000 0.00 0.00 37.91 6.53
96 97 5.239306 ACAATTTCTATGTGTATCATGGCGG 59.761 40.000 0.00 0.00 37.91 6.13
97 98 6.018016 TCACAATTTCTATGTGTATCATGGCG 60.018 38.462 6.56 0.00 46.42 5.69
98 99 7.263100 TCACAATTTCTATGTGTATCATGGC 57.737 36.000 6.56 0.00 46.42 4.40
99 100 7.806487 GCATCACAATTTCTATGTGTATCATGG 59.194 37.037 6.56 0.00 46.42 3.66
100 101 8.565416 AGCATCACAATTTCTATGTGTATCATG 58.435 33.333 6.56 4.67 46.42 3.07
101 102 8.687292 AGCATCACAATTTCTATGTGTATCAT 57.313 30.769 6.56 0.00 46.42 2.45
102 103 8.510243 AAGCATCACAATTTCTATGTGTATCA 57.490 30.769 6.56 0.00 46.42 2.15
116 117 9.736414 AGCATTCTTCTATATAAGCATCACAAT 57.264 29.630 0.00 0.00 0.00 2.71
118 119 9.645059 GTAGCATTCTTCTATATAAGCATCACA 57.355 33.333 0.00 0.00 0.00 3.58
119 120 9.868277 AGTAGCATTCTTCTATATAAGCATCAC 57.132 33.333 0.00 0.00 0.00 3.06
130 131 9.678260 AATCTTGAACAAGTAGCATTCTTCTAT 57.322 29.630 13.15 0.00 39.38 1.98
131 132 9.507329 AAATCTTGAACAAGTAGCATTCTTCTA 57.493 29.630 13.15 0.00 39.38 2.10
132 133 7.992754 AATCTTGAACAAGTAGCATTCTTCT 57.007 32.000 13.15 0.00 39.38 2.85
133 134 7.061557 GCAAATCTTGAACAAGTAGCATTCTTC 59.938 37.037 13.15 0.00 39.38 2.87
134 135 6.865205 GCAAATCTTGAACAAGTAGCATTCTT 59.135 34.615 13.15 0.00 39.38 2.52
135 136 6.016024 TGCAAATCTTGAACAAGTAGCATTCT 60.016 34.615 13.15 0.00 39.38 2.40
136 137 6.151691 TGCAAATCTTGAACAAGTAGCATTC 58.848 36.000 13.15 0.00 39.38 2.67
137 138 6.088016 TGCAAATCTTGAACAAGTAGCATT 57.912 33.333 13.15 4.49 39.38 3.56
138 139 5.710513 TGCAAATCTTGAACAAGTAGCAT 57.289 34.783 13.15 0.00 39.38 3.79
139 140 5.617529 CGATGCAAATCTTGAACAAGTAGCA 60.618 40.000 18.57 18.57 39.38 3.49
140 141 4.790140 CGATGCAAATCTTGAACAAGTAGC 59.210 41.667 13.15 12.59 39.38 3.58
141 142 5.931532 ACGATGCAAATCTTGAACAAGTAG 58.068 37.500 13.15 4.83 39.38 2.57
142 143 5.940192 ACGATGCAAATCTTGAACAAGTA 57.060 34.783 13.15 2.77 39.38 2.24
143 144 4.836125 ACGATGCAAATCTTGAACAAGT 57.164 36.364 13.15 0.48 39.38 3.16
144 145 4.383649 CCAACGATGCAAATCTTGAACAAG 59.616 41.667 8.09 8.09 39.71 3.16
145 146 4.202101 ACCAACGATGCAAATCTTGAACAA 60.202 37.500 0.00 0.00 0.00 2.83
146 147 3.317711 ACCAACGATGCAAATCTTGAACA 59.682 39.130 0.00 0.00 0.00 3.18
147 148 3.900941 ACCAACGATGCAAATCTTGAAC 58.099 40.909 0.00 0.00 0.00 3.18
148 149 4.582701 AACCAACGATGCAAATCTTGAA 57.417 36.364 0.00 0.00 0.00 2.69
149 150 4.582701 AAACCAACGATGCAAATCTTGA 57.417 36.364 0.00 0.00 0.00 3.02
150 151 4.858692 CCTAAACCAACGATGCAAATCTTG 59.141 41.667 0.00 0.00 0.00 3.02
151 152 4.082245 CCCTAAACCAACGATGCAAATCTT 60.082 41.667 0.00 0.00 0.00 2.40
152 153 3.443681 CCCTAAACCAACGATGCAAATCT 59.556 43.478 0.00 0.00 0.00 2.40
153 154 3.428862 CCCCTAAACCAACGATGCAAATC 60.429 47.826 0.00 0.00 0.00 2.17
154 155 2.495669 CCCCTAAACCAACGATGCAAAT 59.504 45.455 0.00 0.00 0.00 2.32
155 156 1.889829 CCCCTAAACCAACGATGCAAA 59.110 47.619 0.00 0.00 0.00 3.68
156 157 1.202952 ACCCCTAAACCAACGATGCAA 60.203 47.619 0.00 0.00 0.00 4.08
157 158 0.402504 ACCCCTAAACCAACGATGCA 59.597 50.000 0.00 0.00 0.00 3.96
158 159 1.201414 CAACCCCTAAACCAACGATGC 59.799 52.381 0.00 0.00 0.00 3.91
159 160 1.816224 CCAACCCCTAAACCAACGATG 59.184 52.381 0.00 0.00 0.00 3.84
160 161 1.426215 ACCAACCCCTAAACCAACGAT 59.574 47.619 0.00 0.00 0.00 3.73
161 162 0.845337 ACCAACCCCTAAACCAACGA 59.155 50.000 0.00 0.00 0.00 3.85
162 163 1.338655 CAACCAACCCCTAAACCAACG 59.661 52.381 0.00 0.00 0.00 4.10
163 164 1.689813 CCAACCAACCCCTAAACCAAC 59.310 52.381 0.00 0.00 0.00 3.77
164 165 1.574339 TCCAACCAACCCCTAAACCAA 59.426 47.619 0.00 0.00 0.00 3.67
165 166 1.146152 CTCCAACCAACCCCTAAACCA 59.854 52.381 0.00 0.00 0.00 3.67
166 167 1.919240 CTCCAACCAACCCCTAAACC 58.081 55.000 0.00 0.00 0.00 3.27
167 168 1.254026 GCTCCAACCAACCCCTAAAC 58.746 55.000 0.00 0.00 0.00 2.01
168 169 0.854218 TGCTCCAACCAACCCCTAAA 59.146 50.000 0.00 0.00 0.00 1.85
169 170 0.854218 TTGCTCCAACCAACCCCTAA 59.146 50.000 0.00 0.00 0.00 2.69
170 171 0.854218 TTTGCTCCAACCAACCCCTA 59.146 50.000 0.00 0.00 0.00 3.53
171 172 0.759060 GTTTGCTCCAACCAACCCCT 60.759 55.000 0.00 0.00 0.00 4.79
172 173 1.745890 GTTTGCTCCAACCAACCCC 59.254 57.895 0.00 0.00 0.00 4.95
173 174 1.362355 CGTTTGCTCCAACCAACCC 59.638 57.895 0.00 0.00 0.00 4.11
174 175 0.458260 AACGTTTGCTCCAACCAACC 59.542 50.000 0.00 0.00 0.00 3.77
175 176 2.287393 AAACGTTTGCTCCAACCAAC 57.713 45.000 13.81 0.00 0.00 3.77
176 177 2.611518 CAAAACGTTTGCTCCAACCAA 58.388 42.857 15.46 0.00 0.00 3.67
177 178 1.737363 GCAAAACGTTTGCTCCAACCA 60.737 47.619 15.46 0.00 41.87 3.67
178 179 0.927537 GCAAAACGTTTGCTCCAACC 59.072 50.000 15.46 0.00 41.87 3.77
179 180 1.587946 CTGCAAAACGTTTGCTCCAAC 59.412 47.619 25.12 9.68 45.13 3.77
180 181 1.919918 CTGCAAAACGTTTGCTCCAA 58.080 45.000 25.12 11.99 45.13 3.53
181 182 0.527385 GCTGCAAAACGTTTGCTCCA 60.527 50.000 25.12 15.39 45.13 3.86
182 183 0.527385 TGCTGCAAAACGTTTGCTCC 60.527 50.000 25.12 18.85 45.13 4.70
183 184 1.490621 ATGCTGCAAAACGTTTGCTC 58.509 45.000 25.12 19.45 45.13 4.26
184 185 1.860326 GAATGCTGCAAAACGTTTGCT 59.140 42.857 25.12 7.92 45.13 3.91
185 186 1.395820 CGAATGCTGCAAAACGTTTGC 60.396 47.619 15.46 19.02 45.11 3.68
186 187 1.395820 GCGAATGCTGCAAAACGTTTG 60.396 47.619 15.46 9.92 38.39 2.93
187 188 0.852136 GCGAATGCTGCAAAACGTTT 59.148 45.000 7.96 7.96 38.39 3.60
188 189 2.505447 GCGAATGCTGCAAAACGTT 58.495 47.368 20.45 0.00 38.39 3.99
189 190 4.226803 GCGAATGCTGCAAAACGT 57.773 50.000 20.45 0.00 38.39 3.99
206 207 0.039617 CGCTATCCGCTCTTCCTGAG 60.040 60.000 0.00 0.00 45.33 3.35
207 208 0.465642 TCGCTATCCGCTCTTCCTGA 60.466 55.000 0.00 0.00 36.73 3.86
208 209 0.385751 TTCGCTATCCGCTCTTCCTG 59.614 55.000 0.00 0.00 36.73 3.86
209 210 1.333177 ATTCGCTATCCGCTCTTCCT 58.667 50.000 0.00 0.00 36.73 3.36
210 211 1.795286 CAATTCGCTATCCGCTCTTCC 59.205 52.381 0.00 0.00 36.73 3.46
211 212 1.795286 CCAATTCGCTATCCGCTCTTC 59.205 52.381 0.00 0.00 36.73 2.87
212 213 1.139058 ACCAATTCGCTATCCGCTCTT 59.861 47.619 0.00 0.00 36.73 2.85
213 214 0.753262 ACCAATTCGCTATCCGCTCT 59.247 50.000 0.00 0.00 36.73 4.09
214 215 0.861837 CACCAATTCGCTATCCGCTC 59.138 55.000 0.00 0.00 36.73 5.03
215 216 1.160329 GCACCAATTCGCTATCCGCT 61.160 55.000 0.00 0.00 36.73 5.52
216 217 1.160329 AGCACCAATTCGCTATCCGC 61.160 55.000 0.00 0.00 36.50 5.54
217 218 0.861837 GAGCACCAATTCGCTATCCG 59.138 55.000 0.00 0.00 38.99 4.18
218 219 1.599542 GTGAGCACCAATTCGCTATCC 59.400 52.381 0.00 0.00 38.99 2.59
219 220 2.279741 TGTGAGCACCAATTCGCTATC 58.720 47.619 0.00 0.00 38.99 2.08
220 221 2.401583 TGTGAGCACCAATTCGCTAT 57.598 45.000 0.00 0.00 38.99 2.97
221 222 2.076100 CTTGTGAGCACCAATTCGCTA 58.924 47.619 0.00 0.00 38.99 4.26
222 223 0.877071 CTTGTGAGCACCAATTCGCT 59.123 50.000 0.00 0.00 42.42 4.93
223 224 0.874390 TCTTGTGAGCACCAATTCGC 59.126 50.000 0.00 0.00 0.00 4.70
224 225 2.146342 ACTCTTGTGAGCACCAATTCG 58.854 47.619 0.00 0.00 43.85 3.34
225 226 3.854784 GCAACTCTTGTGAGCACCAATTC 60.855 47.826 0.00 0.00 43.85 2.17
226 227 2.035066 GCAACTCTTGTGAGCACCAATT 59.965 45.455 0.00 0.00 43.85 2.32
227 228 1.610522 GCAACTCTTGTGAGCACCAAT 59.389 47.619 0.00 0.00 43.85 3.16
228 229 1.024271 GCAACTCTTGTGAGCACCAA 58.976 50.000 0.00 0.00 43.85 3.67
229 230 0.819259 GGCAACTCTTGTGAGCACCA 60.819 55.000 0.00 0.00 43.85 4.17
230 231 0.819259 TGGCAACTCTTGTGAGCACC 60.819 55.000 0.00 0.00 43.85 5.01
231 232 0.308993 GTGGCAACTCTTGTGAGCAC 59.691 55.000 0.00 0.00 43.85 4.40
232 233 0.107263 TGTGGCAACTCTTGTGAGCA 60.107 50.000 0.00 0.00 43.85 4.26
233 234 0.308993 GTGTGGCAACTCTTGTGAGC 59.691 55.000 0.00 0.00 43.85 4.26
234 235 1.869767 GAGTGTGGCAACTCTTGTGAG 59.130 52.381 17.15 0.00 42.78 3.51
235 236 1.209261 TGAGTGTGGCAACTCTTGTGA 59.791 47.619 21.79 6.90 45.69 3.58
236 237 1.667236 TGAGTGTGGCAACTCTTGTG 58.333 50.000 21.79 0.00 45.69 3.33
237 238 2.224606 CATGAGTGTGGCAACTCTTGT 58.775 47.619 22.66 12.57 45.69 3.16
238 239 2.983402 CATGAGTGTGGCAACTCTTG 57.017 50.000 21.79 20.96 45.69 3.02
239 240 2.645838 ACATGAGTGTGGCAACTCTT 57.354 45.000 21.79 16.18 45.69 2.85
253 254 1.726248 CGCACGAATCTCAACACATGA 59.274 47.619 0.00 0.00 36.38 3.07
254 255 1.726248 TCGCACGAATCTCAACACATG 59.274 47.619 0.00 0.00 0.00 3.21
255 256 1.995484 CTCGCACGAATCTCAACACAT 59.005 47.619 0.00 0.00 0.00 3.21
256 257 1.418373 CTCGCACGAATCTCAACACA 58.582 50.000 0.00 0.00 0.00 3.72
257 258 0.716108 CCTCGCACGAATCTCAACAC 59.284 55.000 0.00 0.00 0.00 3.32
258 259 0.601057 TCCTCGCACGAATCTCAACA 59.399 50.000 0.00 0.00 0.00 3.33
259 260 1.135373 TCTCCTCGCACGAATCTCAAC 60.135 52.381 0.00 0.00 0.00 3.18
260 261 1.173913 TCTCCTCGCACGAATCTCAA 58.826 50.000 0.00 0.00 0.00 3.02
261 262 1.335182 GATCTCCTCGCACGAATCTCA 59.665 52.381 0.00 0.00 0.00 3.27
262 263 1.661743 CGATCTCCTCGCACGAATCTC 60.662 57.143 0.00 0.00 41.14 2.75
263 264 0.309302 CGATCTCCTCGCACGAATCT 59.691 55.000 0.00 0.00 41.14 2.40
264 265 0.661780 CCGATCTCCTCGCACGAATC 60.662 60.000 0.00 0.00 46.25 2.52
265 266 1.101635 TCCGATCTCCTCGCACGAAT 61.102 55.000 0.00 0.00 46.25 3.34
266 267 1.747745 TCCGATCTCCTCGCACGAA 60.748 57.895 0.00 0.00 46.25 3.85
267 268 2.124860 TCCGATCTCCTCGCACGA 60.125 61.111 0.00 0.00 46.25 4.35
268 269 2.024871 GTCCGATCTCCTCGCACG 59.975 66.667 0.00 0.00 46.25 5.34
269 270 2.024871 CGTCCGATCTCCTCGCAC 59.975 66.667 0.00 0.00 46.25 5.34
270 271 3.889044 GCGTCCGATCTCCTCGCA 61.889 66.667 13.44 0.00 46.25 5.10
271 272 3.815569 CTGCGTCCGATCTCCTCGC 62.816 68.421 12.10 12.10 46.25 5.03
273 274 0.030101 CTTCTGCGTCCGATCTCCTC 59.970 60.000 0.00 0.00 0.00 3.71
274 275 0.394488 TCTTCTGCGTCCGATCTCCT 60.394 55.000 0.00 0.00 0.00 3.69
275 276 0.671251 ATCTTCTGCGTCCGATCTCC 59.329 55.000 0.00 0.00 0.00 3.71
276 277 1.601663 CCATCTTCTGCGTCCGATCTC 60.602 57.143 0.00 0.00 0.00 2.75
277 278 0.387202 CCATCTTCTGCGTCCGATCT 59.613 55.000 0.00 0.00 0.00 2.75
278 279 1.218230 GCCATCTTCTGCGTCCGATC 61.218 60.000 0.00 0.00 0.00 3.69
279 280 1.227380 GCCATCTTCTGCGTCCGAT 60.227 57.895 0.00 0.00 0.00 4.18
280 281 2.184322 GCCATCTTCTGCGTCCGA 59.816 61.111 0.00 0.00 0.00 4.55
281 282 3.257561 CGCCATCTTCTGCGTCCG 61.258 66.667 0.00 0.00 45.43 4.79
286 287 2.029904 GAGCGAACGCCATCTTCTGC 62.030 60.000 15.44 0.00 43.17 4.26
287 288 0.737367 TGAGCGAACGCCATCTTCTG 60.737 55.000 15.44 0.00 43.17 3.02
288 289 0.459237 CTGAGCGAACGCCATCTTCT 60.459 55.000 15.44 0.00 43.17 2.85
289 290 0.458543 TCTGAGCGAACGCCATCTTC 60.459 55.000 15.44 6.97 43.17 2.87
290 291 0.037326 TTCTGAGCGAACGCCATCTT 60.037 50.000 15.44 0.00 43.17 2.40
291 292 0.037326 TTTCTGAGCGAACGCCATCT 60.037 50.000 15.44 0.00 43.17 2.90
292 293 0.796312 TTTTCTGAGCGAACGCCATC 59.204 50.000 15.44 8.34 43.17 3.51
293 294 0.517316 GTTTTCTGAGCGAACGCCAT 59.483 50.000 15.44 0.00 43.17 4.40
294 295 0.531974 AGTTTTCTGAGCGAACGCCA 60.532 50.000 15.44 11.80 43.17 5.69
295 296 0.164002 GAGTTTTCTGAGCGAACGCC 59.836 55.000 15.44 7.96 43.17 5.68
296 297 1.140816 AGAGTTTTCTGAGCGAACGC 58.859 50.000 11.31 11.31 35.07 4.84
297 298 3.053455 AGAAGAGTTTTCTGAGCGAACG 58.947 45.455 0.00 0.00 32.79 3.95
298 299 4.051922 TGAGAAGAGTTTTCTGAGCGAAC 58.948 43.478 0.00 0.00 32.79 3.95
299 300 4.038042 TCTGAGAAGAGTTTTCTGAGCGAA 59.962 41.667 5.18 0.00 31.23 4.70
300 301 3.570125 TCTGAGAAGAGTTTTCTGAGCGA 59.430 43.478 5.18 0.00 31.23 4.93
301 302 3.906998 TCTGAGAAGAGTTTTCTGAGCG 58.093 45.455 5.18 0.00 31.23 5.03
303 304 4.880759 TGCTCTGAGAAGAGTTTTCTGAG 58.119 43.478 9.28 2.00 38.90 3.35
304 305 4.944619 TGCTCTGAGAAGAGTTTTCTGA 57.055 40.909 9.28 0.00 38.16 3.27
305 306 4.996122 ACATGCTCTGAGAAGAGTTTTCTG 59.004 41.667 9.28 0.00 38.16 3.02
306 307 5.226194 ACATGCTCTGAGAAGAGTTTTCT 57.774 39.130 9.28 0.00 38.16 2.52
307 308 5.389307 CGAACATGCTCTGAGAAGAGTTTTC 60.389 44.000 9.28 0.67 38.16 2.29
308 309 4.450419 CGAACATGCTCTGAGAAGAGTTTT 59.550 41.667 9.28 0.00 38.16 2.43
309 310 3.993081 CGAACATGCTCTGAGAAGAGTTT 59.007 43.478 9.28 0.00 38.16 2.66
310 311 3.583806 CGAACATGCTCTGAGAAGAGTT 58.416 45.455 9.28 7.39 38.16 3.01
311 312 2.673610 GCGAACATGCTCTGAGAAGAGT 60.674 50.000 9.28 0.00 38.16 3.24
312 313 1.925847 GCGAACATGCTCTGAGAAGAG 59.074 52.381 9.28 0.00 38.86 2.85
313 314 1.547820 AGCGAACATGCTCTGAGAAGA 59.452 47.619 9.28 0.00 42.95 2.87
314 315 2.007360 AGCGAACATGCTCTGAGAAG 57.993 50.000 9.28 0.00 42.95 2.85
323 324 3.548818 GGAATGTTATGGAGCGAACATGC 60.549 47.826 1.29 0.00 43.73 4.06
324 325 3.003689 GGGAATGTTATGGAGCGAACATG 59.996 47.826 1.29 0.00 43.73 3.21
325 326 3.214328 GGGAATGTTATGGAGCGAACAT 58.786 45.455 0.00 0.00 45.86 2.71
326 327 2.639065 GGGAATGTTATGGAGCGAACA 58.361 47.619 0.00 0.00 39.74 3.18
327 328 1.597663 CGGGAATGTTATGGAGCGAAC 59.402 52.381 0.00 0.00 0.00 3.95
328 329 1.483004 TCGGGAATGTTATGGAGCGAA 59.517 47.619 0.00 0.00 0.00 4.70
329 330 1.116308 TCGGGAATGTTATGGAGCGA 58.884 50.000 0.00 0.00 0.00 4.93
330 331 2.169832 ATCGGGAATGTTATGGAGCG 57.830 50.000 0.00 0.00 0.00 5.03
331 332 6.575162 ATTTTATCGGGAATGTTATGGAGC 57.425 37.500 0.00 0.00 0.00 4.70
332 333 9.893305 GTAAATTTTATCGGGAATGTTATGGAG 57.107 33.333 0.00 0.00 0.00 3.86
333 334 8.561212 CGTAAATTTTATCGGGAATGTTATGGA 58.439 33.333 0.00 0.00 0.00 3.41
334 335 7.806014 CCGTAAATTTTATCGGGAATGTTATGG 59.194 37.037 16.15 0.00 39.41 2.74
335 336 8.561212 TCCGTAAATTTTATCGGGAATGTTATG 58.439 33.333 20.56 0.00 42.71 1.90
336 337 8.680039 TCCGTAAATTTTATCGGGAATGTTAT 57.320 30.769 20.56 0.00 42.71 1.89
337 338 8.503458 TTCCGTAAATTTTATCGGGAATGTTA 57.497 30.769 20.56 5.44 42.71 2.41
338 339 7.393841 TTCCGTAAATTTTATCGGGAATGTT 57.606 32.000 20.56 0.00 42.71 2.71
339 340 7.576861 ATTCCGTAAATTTTATCGGGAATGT 57.423 32.000 20.04 8.06 42.71 2.71
340 341 7.096230 GCAATTCCGTAAATTTTATCGGGAATG 60.096 37.037 20.75 17.99 42.71 2.67
341 342 6.921307 GCAATTCCGTAAATTTTATCGGGAAT 59.079 34.615 20.56 18.81 42.71 3.01
342 343 6.267070 GCAATTCCGTAAATTTTATCGGGAA 58.733 36.000 20.56 17.91 42.71 3.97
343 344 5.221087 GGCAATTCCGTAAATTTTATCGGGA 60.221 40.000 20.56 16.06 42.71 5.14
344 345 4.979815 GGCAATTCCGTAAATTTTATCGGG 59.020 41.667 20.56 11.27 42.71 5.14
345 346 5.827666 AGGCAATTCCGTAAATTTTATCGG 58.172 37.500 17.18 17.18 43.65 4.18
346 347 6.491394 TGAGGCAATTCCGTAAATTTTATCG 58.509 36.000 0.00 0.00 40.77 2.92
350 351 8.073768 CGTATATGAGGCAATTCCGTAAATTTT 58.926 33.333 0.00 0.00 40.77 1.82
351 352 7.442969 TCGTATATGAGGCAATTCCGTAAATTT 59.557 33.333 0.00 0.00 40.77 1.82
352 353 6.932400 TCGTATATGAGGCAATTCCGTAAATT 59.068 34.615 0.00 0.00 40.77 1.82
353 354 6.460781 TCGTATATGAGGCAATTCCGTAAAT 58.539 36.000 0.00 0.00 40.77 1.40
354 355 5.845103 TCGTATATGAGGCAATTCCGTAAA 58.155 37.500 0.00 0.00 40.77 2.01
355 356 5.456548 TCGTATATGAGGCAATTCCGTAA 57.543 39.130 0.00 0.00 40.77 3.18
356 357 5.184287 TCATCGTATATGAGGCAATTCCGTA 59.816 40.000 1.64 0.00 40.77 4.02
357 358 4.021456 TCATCGTATATGAGGCAATTCCGT 60.021 41.667 1.64 0.00 40.77 4.69
358 359 4.494484 TCATCGTATATGAGGCAATTCCG 58.506 43.478 1.64 0.00 40.77 4.30
359 360 6.621596 GCTTTCATCGTATATGAGGCAATTCC 60.622 42.308 1.64 0.00 32.79 3.01
360 361 6.148480 AGCTTTCATCGTATATGAGGCAATTC 59.852 38.462 1.64 0.00 33.96 2.17
361 362 6.000219 AGCTTTCATCGTATATGAGGCAATT 59.000 36.000 1.64 0.00 33.96 2.32
362 363 5.555017 AGCTTTCATCGTATATGAGGCAAT 58.445 37.500 1.64 0.00 33.96 3.56
363 364 4.960938 AGCTTTCATCGTATATGAGGCAA 58.039 39.130 1.64 0.00 33.96 4.52
364 365 4.560128 GAGCTTTCATCGTATATGAGGCA 58.440 43.478 1.64 0.00 33.96 4.75
365 366 3.610242 CGAGCTTTCATCGTATATGAGGC 59.390 47.826 1.64 0.00 35.48 4.70
375 376 1.560923 AATCGGACGAGCTTTCATCG 58.439 50.000 0.00 0.00 45.54 3.84
376 377 2.030946 CCAAATCGGACGAGCTTTCATC 59.969 50.000 0.00 0.00 36.56 2.92
377 378 2.009774 CCAAATCGGACGAGCTTTCAT 58.990 47.619 0.00 0.00 36.56 2.57
378 379 1.270625 ACCAAATCGGACGAGCTTTCA 60.271 47.619 0.00 0.00 38.63 2.69
379 380 1.439679 ACCAAATCGGACGAGCTTTC 58.560 50.000 0.00 0.00 38.63 2.62
380 381 2.344025 GTACCAAATCGGACGAGCTTT 58.656 47.619 0.00 0.00 38.63 3.51
381 382 1.734707 CGTACCAAATCGGACGAGCTT 60.735 52.381 0.00 0.00 39.32 3.74
382 383 0.179145 CGTACCAAATCGGACGAGCT 60.179 55.000 0.00 0.00 39.32 4.09
383 384 0.179156 TCGTACCAAATCGGACGAGC 60.179 55.000 0.00 0.00 40.25 5.03
384 385 2.486951 ATCGTACCAAATCGGACGAG 57.513 50.000 2.23 0.00 44.72 4.18
385 386 2.945008 ACTATCGTACCAAATCGGACGA 59.055 45.455 0.00 0.00 45.20 4.20
386 387 3.040795 CACTATCGTACCAAATCGGACG 58.959 50.000 0.00 0.00 38.73 4.79
387 388 2.793232 GCACTATCGTACCAAATCGGAC 59.207 50.000 0.00 0.00 38.63 4.79
388 389 2.427812 TGCACTATCGTACCAAATCGGA 59.572 45.455 0.00 0.00 38.63 4.55
389 390 2.816689 TGCACTATCGTACCAAATCGG 58.183 47.619 0.00 0.00 42.50 4.18
390 391 4.084537 GGATTGCACTATCGTACCAAATCG 60.085 45.833 0.00 0.00 0.00 3.34
391 392 4.814234 TGGATTGCACTATCGTACCAAATC 59.186 41.667 0.00 0.00 0.00 2.17
392 393 4.574828 GTGGATTGCACTATCGTACCAAAT 59.425 41.667 0.45 0.00 0.00 2.32
393 394 3.936453 GTGGATTGCACTATCGTACCAAA 59.064 43.478 0.45 0.00 0.00 3.28
394 395 3.527533 GTGGATTGCACTATCGTACCAA 58.472 45.455 0.45 0.00 0.00 3.67
395 396 2.159014 GGTGGATTGCACTATCGTACCA 60.159 50.000 8.27 0.00 34.84 3.25
396 397 2.480845 GGTGGATTGCACTATCGTACC 58.519 52.381 8.27 7.35 0.00 3.34
397 398 2.124903 CGGTGGATTGCACTATCGTAC 58.875 52.381 8.27 0.00 0.00 3.67
398 399 1.752498 ACGGTGGATTGCACTATCGTA 59.248 47.619 8.27 0.00 0.00 3.43
399 400 0.535335 ACGGTGGATTGCACTATCGT 59.465 50.000 8.27 6.75 0.00 3.73
400 401 0.930310 CACGGTGGATTGCACTATCG 59.070 55.000 8.27 6.14 0.00 2.92
401 402 2.309528 TCACGGTGGATTGCACTATC 57.690 50.000 8.50 0.00 0.00 2.08
402 403 2.356135 GTTCACGGTGGATTGCACTAT 58.644 47.619 8.50 0.00 0.00 2.12
403 404 1.609580 GGTTCACGGTGGATTGCACTA 60.610 52.381 8.50 0.00 0.00 2.74
404 405 0.889186 GGTTCACGGTGGATTGCACT 60.889 55.000 8.50 0.00 0.00 4.40
405 406 1.579429 GGTTCACGGTGGATTGCAC 59.421 57.895 8.50 0.00 0.00 4.57
406 407 1.602323 GGGTTCACGGTGGATTGCA 60.602 57.895 8.50 0.00 0.00 4.08
407 408 1.602323 TGGGTTCACGGTGGATTGC 60.602 57.895 8.50 0.00 0.00 3.56
408 409 1.241315 GGTGGGTTCACGGTGGATTG 61.241 60.000 8.50 0.00 44.50 2.67
409 410 1.074248 GGTGGGTTCACGGTGGATT 59.926 57.895 8.50 0.00 44.50 3.01
410 411 1.423794 AAGGTGGGTTCACGGTGGAT 61.424 55.000 8.50 0.00 44.50 3.41
411 412 2.073716 AAGGTGGGTTCACGGTGGA 61.074 57.895 8.50 0.00 44.50 4.02
412 413 1.896660 CAAGGTGGGTTCACGGTGG 60.897 63.158 8.50 0.00 44.50 4.61
413 414 0.884704 CTCAAGGTGGGTTCACGGTG 60.885 60.000 0.56 0.56 44.50 4.94
414 415 1.450211 CTCAAGGTGGGTTCACGGT 59.550 57.895 0.00 0.00 44.50 4.83
415 416 1.966451 GCTCAAGGTGGGTTCACGG 60.966 63.158 0.00 0.00 44.50 4.94
416 417 0.817634 TTGCTCAAGGTGGGTTCACG 60.818 55.000 0.00 0.00 44.50 4.35
417 418 0.954452 CTTGCTCAAGGTGGGTTCAC 59.046 55.000 1.79 0.00 42.91 3.18
418 419 0.823356 GCTTGCTCAAGGTGGGTTCA 60.823 55.000 11.15 0.00 38.80 3.18
419 420 1.856265 CGCTTGCTCAAGGTGGGTTC 61.856 60.000 11.15 0.00 38.80 3.62
420 421 1.898574 CGCTTGCTCAAGGTGGGTT 60.899 57.895 11.15 0.00 38.80 4.11
421 422 2.281761 CGCTTGCTCAAGGTGGGT 60.282 61.111 11.15 0.00 38.80 4.51
422 423 1.898574 AACGCTTGCTCAAGGTGGG 60.899 57.895 11.15 0.00 38.80 4.61
423 424 1.165907 TCAACGCTTGCTCAAGGTGG 61.166 55.000 11.15 5.77 38.80 4.61
424 425 0.877071 ATCAACGCTTGCTCAAGGTG 59.123 50.000 11.15 0.00 38.80 4.00
425 426 1.160137 GATCAACGCTTGCTCAAGGT 58.840 50.000 11.15 5.18 38.80 3.50
426 427 1.159285 TGATCAACGCTTGCTCAAGG 58.841 50.000 11.15 4.63 38.80 3.61
427 428 2.578495 GTTGATCAACGCTTGCTCAAG 58.422 47.619 22.09 5.31 43.80 3.02
428 429 2.686558 GTTGATCAACGCTTGCTCAA 57.313 45.000 22.09 10.72 41.77 3.02
438 439 1.303317 AGGGCCACCGTTGATCAAC 60.303 57.895 25.68 25.68 43.47 3.18
439 440 1.303236 CAGGGCCACCGTTGATCAA 60.303 57.895 6.18 3.38 43.47 2.57
440 441 2.350895 CAGGGCCACCGTTGATCA 59.649 61.111 6.18 0.00 43.47 2.92
441 442 2.252072 TAGCAGGGCCACCGTTGATC 62.252 60.000 6.18 0.00 43.47 2.92
442 443 2.297895 TAGCAGGGCCACCGTTGAT 61.298 57.895 6.18 0.00 43.47 2.57
443 444 2.925706 TAGCAGGGCCACCGTTGA 60.926 61.111 6.18 0.00 43.47 3.18
444 445 2.746277 GTAGCAGGGCCACCGTTG 60.746 66.667 6.18 0.00 43.47 4.10
445 446 2.465055 GAAGTAGCAGGGCCACCGTT 62.465 60.000 6.18 0.00 43.47 4.44
446 447 2.928396 AAGTAGCAGGGCCACCGT 60.928 61.111 6.18 0.00 43.47 4.83
447 448 2.125106 GAAGTAGCAGGGCCACCG 60.125 66.667 6.18 0.00 43.47 4.94
448 449 1.610554 TACGAAGTAGCAGGGCCACC 61.611 60.000 6.18 0.00 45.11 4.61
449 450 1.895238 TACGAAGTAGCAGGGCCAC 59.105 57.895 6.18 0.00 45.11 5.01
450 451 4.445832 TACGAAGTAGCAGGGCCA 57.554 55.556 6.18 0.00 45.11 5.36
462 463 9.647797 ACAGTATTTGTATGATTTCTGTACGAA 57.352 29.630 0.00 0.00 38.56 3.85
463 464 9.297586 GACAGTATTTGTATGATTTCTGTACGA 57.702 33.333 0.00 0.00 41.05 3.43
464 465 8.259872 CGACAGTATTTGTATGATTTCTGTACG 58.740 37.037 0.00 0.00 41.05 3.67
465 466 9.084164 ACGACAGTATTTGTATGATTTCTGTAC 57.916 33.333 0.00 0.00 41.05 2.90
467 468 9.817809 ATACGACAGTATTTGTATGATTTCTGT 57.182 29.630 0.00 0.00 40.44 3.41
469 470 9.817809 ACATACGACAGTATTTGTATGATTTCT 57.182 29.630 15.73 0.00 44.28 2.52
470 471 9.849607 CACATACGACAGTATTTGTATGATTTC 57.150 33.333 15.73 0.00 44.28 2.17
471 472 9.378551 ACACATACGACAGTATTTGTATGATTT 57.621 29.630 15.73 0.22 46.46 2.17
472 473 8.942338 ACACATACGACAGTATTTGTATGATT 57.058 30.769 15.73 2.22 46.46 2.57
473 474 9.678941 CTACACATACGACAGTATTTGTATGAT 57.321 33.333 15.73 7.67 46.46 2.45
474 475 7.646526 GCTACACATACGACAGTATTTGTATGA 59.353 37.037 15.73 0.89 46.46 2.15
475 476 7.434013 TGCTACACATACGACAGTATTTGTATG 59.566 37.037 14.23 9.08 46.46 2.39
476 477 7.485810 TGCTACACATACGACAGTATTTGTAT 58.514 34.615 14.23 0.00 46.46 2.29
477 478 6.854778 TGCTACACATACGACAGTATTTGTA 58.145 36.000 13.56 13.56 46.46 2.41
479 480 6.466812 GTTGCTACACATACGACAGTATTTG 58.533 40.000 0.00 3.99 43.21 2.32
480 481 5.287752 CGTTGCTACACATACGACAGTATTT 59.712 40.000 0.00 0.00 41.33 1.40
481 482 4.796830 CGTTGCTACACATACGACAGTATT 59.203 41.667 0.00 0.00 41.33 1.89
482 483 4.348656 CGTTGCTACACATACGACAGTAT 58.651 43.478 0.00 0.00 43.88 2.12
483 484 3.750512 CGTTGCTACACATACGACAGTA 58.249 45.455 0.00 0.00 35.90 2.74
484 485 2.592194 CGTTGCTACACATACGACAGT 58.408 47.619 0.00 0.00 35.90 3.55
485 486 1.320555 GCGTTGCTACACATACGACAG 59.679 52.381 0.00 0.00 35.90 3.51
486 487 1.068125 AGCGTTGCTACACATACGACA 60.068 47.619 0.00 0.00 36.99 4.35
487 488 1.582502 GAGCGTTGCTACACATACGAC 59.417 52.381 0.00 0.00 39.88 4.34
488 489 1.471287 AGAGCGTTGCTACACATACGA 59.529 47.619 0.00 0.00 39.88 3.43
489 490 1.909376 AGAGCGTTGCTACACATACG 58.091 50.000 0.00 0.00 39.88 3.06
490 491 5.773239 TTTTAGAGCGTTGCTACACATAC 57.227 39.130 0.00 0.00 39.88 2.39
491 492 6.978343 AATTTTAGAGCGTTGCTACACATA 57.022 33.333 0.00 0.00 39.88 2.29
492 493 5.880054 AATTTTAGAGCGTTGCTACACAT 57.120 34.783 0.00 0.00 39.88 3.21
493 494 5.682943 AAATTTTAGAGCGTTGCTACACA 57.317 34.783 0.00 0.00 39.88 3.72
494 495 8.814235 TCTATAAATTTTAGAGCGTTGCTACAC 58.186 33.333 6.02 0.00 39.88 2.90
495 496 8.936070 TCTATAAATTTTAGAGCGTTGCTACA 57.064 30.769 6.02 0.00 39.88 2.74
543 544 3.390175 TGTGGGACCTTCCAAGAAAAA 57.610 42.857 0.00 0.00 38.64 1.94
557 558 5.362430 GGGCAAATTATTCTTACATGTGGGA 59.638 40.000 9.11 3.47 0.00 4.37
558 559 5.128499 TGGGCAAATTATTCTTACATGTGGG 59.872 40.000 9.11 0.80 0.00 4.61
642 649 0.468029 AGCAATAAATCCGCCCCCAG 60.468 55.000 0.00 0.00 0.00 4.45
643 650 0.467290 GAGCAATAAATCCGCCCCCA 60.467 55.000 0.00 0.00 0.00 4.96
739 748 2.370257 AAAACTGGGGGAGGGAGGGA 62.370 60.000 0.00 0.00 0.00 4.20
740 749 0.551624 TAAAACTGGGGGAGGGAGGG 60.552 60.000 0.00 0.00 0.00 4.30
741 750 0.624254 GTAAAACTGGGGGAGGGAGG 59.376 60.000 0.00 0.00 0.00 4.30
742 751 1.560146 GAGTAAAACTGGGGGAGGGAG 59.440 57.143 0.00 0.00 0.00 4.30
743 752 1.665137 GAGTAAAACTGGGGGAGGGA 58.335 55.000 0.00 0.00 0.00 4.20
744 753 0.624254 GGAGTAAAACTGGGGGAGGG 59.376 60.000 0.00 0.00 0.00 4.30
745 754 0.624254 GGGAGTAAAACTGGGGGAGG 59.376 60.000 0.00 0.00 0.00 4.30
746 755 1.282157 CTGGGAGTAAAACTGGGGGAG 59.718 57.143 0.00 0.00 0.00 4.30
859 882 2.343758 GAACCACCTCTGCGCTCA 59.656 61.111 9.73 0.00 0.00 4.26
860 883 2.029844 GTGAACCACCTCTGCGCTC 61.030 63.158 9.73 0.00 0.00 5.03
879 902 3.007070 GCGGCGGTTGTACGTGAAG 62.007 63.158 9.78 0.00 35.98 3.02
953 976 4.849329 ACGAATCCGACGCGCTCC 62.849 66.667 5.73 0.00 39.50 4.70
975 998 2.186125 CGAAACCCTAGGCCCGTC 59.814 66.667 2.05 0.00 0.00 4.79
976 999 4.091939 GCGAAACCCTAGGCCCGT 62.092 66.667 2.05 0.00 0.00 5.28
977 1000 4.851179 GGCGAAACCCTAGGCCCG 62.851 72.222 2.05 4.68 39.67 6.13
978 1001 4.851179 CGGCGAAACCCTAGGCCC 62.851 72.222 0.00 0.00 42.59 5.80
1413 1466 4.867599 CCGTACTTCCTCGGCCGC 62.868 72.222 23.51 2.01 40.28 6.53
1414 1467 4.203076 CCCGTACTTCCTCGGCCG 62.203 72.222 22.12 22.12 44.63 6.13
1659 1712 4.755411 TGTAGAAAGGCATACAGTACTGC 58.245 43.478 22.90 9.54 37.66 4.40
1660 1713 6.341316 ACATGTAGAAAGGCATACAGTACTG 58.659 40.000 21.44 21.44 35.49 2.74
1661 1714 6.546428 ACATGTAGAAAGGCATACAGTACT 57.454 37.500 0.00 0.00 35.49 2.73
1672 1728 2.890311 TGGTGGCAAACATGTAGAAAGG 59.110 45.455 0.00 0.00 0.00 3.11
1933 2105 5.104735 ACCACCCTTTTATCTTGCAAAAACA 60.105 36.000 0.00 0.00 0.00 2.83
1935 2107 5.622346 ACCACCCTTTTATCTTGCAAAAA 57.378 34.783 0.00 0.00 0.00 1.94
1992 2164 4.466370 TGATACTCCTATATTGCCCGGAAG 59.534 45.833 0.73 0.00 0.00 3.46
1993 2165 4.422057 TGATACTCCTATATTGCCCGGAA 58.578 43.478 0.73 0.00 0.00 4.30
1994 2166 4.055710 TGATACTCCTATATTGCCCGGA 57.944 45.455 0.73 0.00 0.00 5.14
1995 2167 4.162320 ACATGATACTCCTATATTGCCCGG 59.838 45.833 0.00 0.00 0.00 5.73
1996 2168 5.344743 ACATGATACTCCTATATTGCCCG 57.655 43.478 0.00 0.00 0.00 6.13
1997 2169 9.686683 AATTAACATGATACTCCTATATTGCCC 57.313 33.333 0.00 0.00 0.00 5.36
2186 2390 4.953667 TCAGCCAACTCTAATATGCAGAG 58.046 43.478 11.37 11.37 44.28 3.35
2187 2391 5.104776 ACTTCAGCCAACTCTAATATGCAGA 60.105 40.000 0.00 0.00 0.00 4.26
2188 2392 5.121811 ACTTCAGCCAACTCTAATATGCAG 58.878 41.667 0.00 0.00 0.00 4.41
2189 2393 5.102953 ACTTCAGCCAACTCTAATATGCA 57.897 39.130 0.00 0.00 0.00 3.96
2190 2394 5.118990 TGACTTCAGCCAACTCTAATATGC 58.881 41.667 0.00 0.00 0.00 3.14
2266 2470 9.926158 TGCACTTTCACATCATATAAATTTGTT 57.074 25.926 0.00 0.00 0.00 2.83
2374 2578 4.468095 TTAGCTTTCGTCAAAGTCAAGC 57.532 40.909 0.00 0.00 41.18 4.01
2378 2582 4.566177 GCGTATTAGCTTTCGTCAAAGTC 58.434 43.478 0.00 0.00 41.18 3.01
2384 2588 1.516042 GTCCGCGTATTAGCTTTCGTC 59.484 52.381 4.92 0.00 34.40 4.20
2387 2591 5.902051 ATTTAGTCCGCGTATTAGCTTTC 57.098 39.130 4.92 0.00 34.40 2.62
2456 2660 0.037697 AACAACCAGAGCACGCGATA 60.038 50.000 15.93 0.00 0.00 2.92
2721 2935 6.821665 ACAGTTGTAGCAAGAAAACAGAAGTA 59.178 34.615 0.00 0.00 0.00 2.24
2831 3049 5.484998 ACCATCCTTTAAGAATTGTGCCATT 59.515 36.000 0.00 0.00 0.00 3.16
2918 3136 2.044123 AACGCCAGGAGAATGGAATC 57.956 50.000 0.00 0.00 43.57 2.52
2919 3137 2.505819 AGTAACGCCAGGAGAATGGAAT 59.494 45.455 0.00 0.00 43.57 3.01
2920 3138 1.906574 AGTAACGCCAGGAGAATGGAA 59.093 47.619 0.00 0.00 43.57 3.53
2921 3139 1.568504 AGTAACGCCAGGAGAATGGA 58.431 50.000 0.00 0.00 43.57 3.41
2935 3156 9.046296 CAGAATAATGACAGGTATCCAAGTAAC 57.954 37.037 0.00 0.00 0.00 2.50
3003 3224 2.369394 CAGGGACAGGCAAGGAATAAC 58.631 52.381 0.00 0.00 0.00 1.89
3004 3225 1.284785 CCAGGGACAGGCAAGGAATAA 59.715 52.381 0.00 0.00 0.00 1.40
3015 3236 4.653341 AGATAGTCTGAAATCCAGGGACAG 59.347 45.833 0.00 0.00 43.12 3.51
3026 3247 4.398358 CACGGTGAGGTAGATAGTCTGAAA 59.602 45.833 0.74 0.00 0.00 2.69
3075 3305 1.159285 TCGAAGCAACATCCTGCAAG 58.841 50.000 0.00 0.00 45.18 4.01
3263 3493 6.756074 CCACTTCACAAAAATAACAAGAAGCA 59.244 34.615 0.00 0.00 35.61 3.91
3270 3500 9.522804 GAACATTACCACTTCACAAAAATAACA 57.477 29.630 0.00 0.00 0.00 2.41
3311 3541 1.660167 TGACAGCTGTGATGCTATGC 58.340 50.000 27.27 6.78 41.98 3.14
3348 3661 7.595502 GCTACAGAATTATATGCTAGAACACGT 59.404 37.037 0.00 0.00 0.00 4.49
3385 3698 4.012374 ACATTCAGTCAACAATAGGCCAG 58.988 43.478 5.01 0.00 0.00 4.85
3502 3942 4.806330 TGTTAGCAGACAGTACTAGCAAC 58.194 43.478 0.00 6.22 0.00 4.17
3562 4019 7.953158 TCAGAGACTATTTTCACAAGAACAG 57.047 36.000 0.00 0.00 32.39 3.16
3590 4051 9.890629 AACTGCATATTAGACATTTCAGTTCTA 57.109 29.630 0.00 0.00 38.65 2.10
3814 4279 6.476380 ACAAAACTGACATTGCATTACAACAG 59.524 34.615 0.00 0.00 42.27 3.16
3816 4281 6.255453 ACACAAAACTGACATTGCATTACAAC 59.745 34.615 0.00 0.00 42.27 3.32
4106 4583 2.361757 CGATGGCCTAATTTGGATGCAA 59.638 45.455 10.34 0.00 0.00 4.08
4137 4614 3.130340 ACAACCTGAAACACAACATGGTC 59.870 43.478 0.00 0.00 0.00 4.02
4178 4655 3.386402 CCTTGGGCTTTTTGTTACCTTCA 59.614 43.478 0.00 0.00 0.00 3.02
4316 4793 1.154188 GTCGTCAGAGTGGTCGCTC 60.154 63.158 3.53 3.53 35.82 5.03
4361 4838 1.401530 CTGCATTGTTGAACGTGCTG 58.598 50.000 20.71 17.48 34.68 4.41
4391 4868 0.249447 CCGGAGCATATGAAGCGTGA 60.249 55.000 6.97 0.00 37.01 4.35
4422 4899 1.304962 GGCCTTGGTTCCCGGAAAT 60.305 57.895 0.73 0.00 0.00 2.17
4424 4901 4.338710 CGGCCTTGGTTCCCGGAA 62.339 66.667 0.73 0.00 38.42 4.30
4451 4928 1.899142 TCGGTCACCATCTTCATGTCA 59.101 47.619 0.00 0.00 0.00 3.58
4480 4957 1.079503 GAAGCTGCTGTAAACCGGAG 58.920 55.000 9.46 0.00 0.00 4.63
4481 4958 0.394938 TGAAGCTGCTGTAAACCGGA 59.605 50.000 9.46 0.00 0.00 5.14
4505 4983 9.624373 CCTACACTCTACTAGGTCAAATACTAA 57.376 37.037 0.00 0.00 0.00 2.24
4552 5030 3.342377 TTATTGGCCGACAATCACTCA 57.658 42.857 1.66 0.00 46.67 3.41
4646 5124 5.722021 ACTAAAAGCAACAATAACAGGGG 57.278 39.130 0.00 0.00 0.00 4.79
4674 5152 3.827625 CGAAGGCAGATAAGAGATACGG 58.172 50.000 0.00 0.00 0.00 4.02
4675 5153 3.238441 GCGAAGGCAGATAAGAGATACG 58.762 50.000 0.00 0.00 39.62 3.06
4676 5154 4.244425 TGCGAAGGCAGATAAGAGATAC 57.756 45.455 0.00 0.00 46.21 2.24
4691 5169 4.700596 GCATAAGCTACTAACTGCGAAG 57.299 45.455 0.00 0.00 37.91 3.79
4777 5255 2.222007 TTCAAAACTGGTGCATGCAC 57.778 45.000 37.29 37.29 45.49 4.57
4852 5330 3.338249 CCAGTAATTCCCGGAGCATATG 58.662 50.000 0.73 0.00 0.00 1.78
4857 5335 1.125633 TACCCAGTAATTCCCGGAGC 58.874 55.000 0.73 0.00 0.00 4.70
4940 5423 6.291377 TGGCTTGACTATGGAATCTGAATAC 58.709 40.000 0.00 0.00 0.00 1.89
5033 5526 1.647346 TCATGGGCGTGACGAATTAC 58.353 50.000 10.10 0.00 0.00 1.89
5034 5527 2.613026 ATCATGGGCGTGACGAATTA 57.387 45.000 10.10 0.00 0.00 1.40
5035 5528 1.670811 GAATCATGGGCGTGACGAATT 59.329 47.619 10.10 0.00 0.00 2.17
5040 5533 0.664761 CATGGAATCATGGGCGTGAC 59.335 55.000 0.00 0.00 45.19 3.67
5263 6028 8.579850 TCCATTAGTGAAAGAAAATAGCACAT 57.420 30.769 0.00 0.00 32.16 3.21
5321 6115 2.844946 TCATCAGCGTCCAAAAGTTCA 58.155 42.857 0.00 0.00 0.00 3.18
5328 6122 0.538584 AGCAGATCATCAGCGTCCAA 59.461 50.000 0.00 0.00 33.83 3.53
5412 6209 3.140141 CCCTACGTACGCCCGGAA 61.140 66.667 16.72 0.00 0.00 4.30
5421 6218 1.382146 CAAGGAGGCCCCCTACGTA 60.382 63.158 6.08 0.00 40.03 3.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.