Multiple sequence alignment - TraesCS2D01G444600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G444600 chr2D 100.000 2835 0 0 1312 4146 555851945 555854779 0.000000e+00 5236.0
1 TraesCS2D01G444600 chr2D 100.000 1775 0 0 4478 6252 555855111 555856885 0.000000e+00 3278.0
2 TraesCS2D01G444600 chr2D 100.000 1058 0 0 1 1058 555850634 555851691 0.000000e+00 1954.0
3 TraesCS2D01G444600 chr2D 84.805 487 68 5 2404 2884 555729063 555729549 9.420000e-133 484.0
4 TraesCS2D01G444600 chr2D 83.410 434 72 0 2461 2894 555614480 555614913 2.710000e-108 403.0
5 TraesCS2D01G444600 chr2D 83.871 403 63 2 3322 3724 555729739 555730139 3.540000e-102 383.0
6 TraesCS2D01G444600 chr2D 80.962 478 91 0 2418 2895 593205499 593205022 4.570000e-101 379.0
7 TraesCS2D01G444600 chr2D 86.979 192 18 4 761 952 645759432 645759616 6.350000e-50 209.0
8 TraesCS2D01G444600 chr2D 76.842 285 47 12 2162 2429 555614196 555614478 6.530000e-30 143.0
9 TraesCS2D01G444600 chr2B 90.897 2340 132 39 1837 4146 662586281 662588569 0.000000e+00 3066.0
10 TraesCS2D01G444600 chr2B 94.770 784 39 2 4493 5275 662588819 662589601 0.000000e+00 1219.0
11 TraesCS2D01G444600 chr2B 87.711 887 87 13 5373 6251 662589742 662590614 0.000000e+00 1014.0
12 TraesCS2D01G444600 chr2B 84.498 787 94 11 2110 2896 662577051 662577809 0.000000e+00 752.0
13 TraesCS2D01G444600 chr2B 89.864 513 40 8 1312 1814 662585787 662586297 0.000000e+00 649.0
14 TraesCS2D01G444600 chr2B 79.388 752 134 15 2162 2894 662376729 662377478 1.550000e-140 510.0
15 TraesCS2D01G444600 chr2B 82.057 418 71 3 2462 2877 719443323 719442908 2.770000e-93 353.0
16 TraesCS2D01G444600 chr2B 91.053 190 16 1 761 950 444961753 444961941 8.040000e-64 255.0
17 TraesCS2D01G444600 chr2B 100.000 30 0 0 1029 1058 662585679 662585708 8.760000e-04 56.5
18 TraesCS2D01G444600 chr2A 90.235 2345 164 35 1837 4146 695276534 695278848 0.000000e+00 3001.0
19 TraesCS2D01G444600 chr2A 97.706 436 8 1 4478 4911 695278882 695279317 0.000000e+00 749.0
20 TraesCS2D01G444600 chr2A 88.528 523 37 12 1312 1814 695276031 695276550 4.140000e-171 612.0
21 TraesCS2D01G444600 chr2A 84.229 558 83 5 2362 2918 695186573 695187126 7.130000e-149 538.0
22 TraesCS2D01G444600 chr2A 81.690 639 66 28 21 646 695275078 695275678 9.420000e-133 484.0
23 TraesCS2D01G444600 chr2A 84.158 404 62 2 3322 3724 695162539 695162941 2.110000e-104 390.0
24 TraesCS2D01G444600 chr2A 87.773 229 14 7 5049 5275 695285930 695286146 8.040000e-64 255.0
25 TraesCS2D01G444600 chr2A 95.935 123 5 0 4907 5029 695284230 695284352 3.820000e-47 200.0
26 TraesCS2D01G444600 chr2A 91.579 95 6 2 666 760 695275760 695275852 5.090000e-26 130.0
27 TraesCS2D01G444600 chr1D 95.000 200 10 0 761 960 118846799 118846600 1.310000e-81 315.0
28 TraesCS2D01G444600 chr7D 94.359 195 9 2 761 954 255793744 255793937 1.320000e-76 298.0
29 TraesCS2D01G444600 chr7D 93.367 196 9 1 761 952 510391378 510391183 2.850000e-73 287.0
30 TraesCS2D01G444600 chr7D 93.684 190 11 1 767 955 136399770 136399959 3.690000e-72 283.0
31 TraesCS2D01G444600 chr5D 92.857 196 13 1 761 955 415753777 415753582 3.690000e-72 283.0
32 TraesCS2D01G444600 chr4A 92.893 197 11 1 761 954 100677648 100677452 3.690000e-72 283.0
33 TraesCS2D01G444600 chr5B 91.837 196 15 1 761 955 502301253 502301058 7.990000e-69 272.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G444600 chr2D 555850634 555856885 6251 False 3489.333333 5236 100.0000 1 6252 3 chr2D.!!$F4 6251
1 TraesCS2D01G444600 chr2D 555729063 555730139 1076 False 433.500000 484 84.3380 2404 3724 2 chr2D.!!$F3 1320
2 TraesCS2D01G444600 chr2D 555614196 555614913 717 False 273.000000 403 80.1260 2162 2894 2 chr2D.!!$F2 732
3 TraesCS2D01G444600 chr2B 662585679 662590614 4935 False 1200.900000 3066 92.6484 1029 6251 5 chr2B.!!$F4 5222
4 TraesCS2D01G444600 chr2B 662577051 662577809 758 False 752.000000 752 84.4980 2110 2896 1 chr2B.!!$F3 786
5 TraesCS2D01G444600 chr2B 662376729 662377478 749 False 510.000000 510 79.3880 2162 2894 1 chr2B.!!$F2 732
6 TraesCS2D01G444600 chr2A 695275078 695279317 4239 False 995.200000 3001 89.9476 21 4911 5 chr2A.!!$F3 4890
7 TraesCS2D01G444600 chr2A 695186573 695187126 553 False 538.000000 538 84.2290 2362 2918 1 chr2A.!!$F2 556
8 TraesCS2D01G444600 chr2A 695284230 695286146 1916 False 227.500000 255 91.8540 4907 5275 2 chr2A.!!$F4 368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
893 967 0.036306 GAATCTCACCACCACCCGTT 59.964 55.000 0.00 0.00 0.00 4.44 F
897 971 0.107081 CTCACCACCACCCGTTTGTA 59.893 55.000 0.00 0.00 0.00 2.41 F
1774 1875 0.538746 TTCTGAAAACCCGGGAAGGC 60.539 55.000 32.02 14.34 39.21 4.35 F
2452 2586 0.971386 TGGTGGTAACGAAGACCCTC 59.029 55.000 0.00 0.00 42.51 4.30 F
3181 3332 0.788391 CCGTGACTCTTTTGGTACGC 59.212 55.000 0.00 0.00 0.00 4.42 F
3531 3685 1.073603 AGGCTTGCTCTTGAGAAAGCT 59.926 47.619 30.90 19.64 43.58 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1928 2032 0.037697 TGCAACCGTGAATCGTAGCT 60.038 50.0 0.00 0.00 37.94 3.32 R
2008 2112 0.038744 ACTCCAGTTTGGCATCAGGG 59.961 55.0 0.00 0.00 37.47 4.45 R
3159 3310 0.320073 TACCAAAAGAGTCACGGCCG 60.320 55.0 26.86 26.86 0.00 6.13 R
3552 3706 0.385390 CGCACTTTGGGCAGAAAACT 59.615 50.0 0.00 0.00 0.00 2.66 R
4878 5056 0.390603 TATCGACCACCCGTTTGCAG 60.391 55.0 0.00 0.00 0.00 4.41 R
5335 7071 0.031314 ACATGAGCTCCGATGCGTAG 59.969 55.0 12.15 0.00 38.13 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.251409 GGGCGGTAAGAATTAGACCC 57.749 55.000 0.00 0.00 32.85 4.46
20 21 1.539712 GGGCGGTAAGAATTAGACCCG 60.540 57.143 0.00 0.00 39.75 5.28
21 22 1.137675 GGCGGTAAGAATTAGACCCGT 59.862 52.381 0.00 0.00 39.19 5.28
22 23 2.199236 GCGGTAAGAATTAGACCCGTG 58.801 52.381 0.00 0.00 39.19 4.94
23 24 2.159198 GCGGTAAGAATTAGACCCGTGA 60.159 50.000 0.00 0.00 39.19 4.35
24 25 3.442100 CGGTAAGAATTAGACCCGTGAC 58.558 50.000 0.00 0.00 34.28 3.67
25 26 3.119388 CGGTAAGAATTAGACCCGTGACA 60.119 47.826 0.00 0.00 34.28 3.58
26 27 4.179298 GGTAAGAATTAGACCCGTGACAC 58.821 47.826 0.00 0.00 0.00 3.67
27 28 3.329929 AAGAATTAGACCCGTGACACC 57.670 47.619 0.00 0.00 0.00 4.16
28 29 1.553704 AGAATTAGACCCGTGACACCC 59.446 52.381 0.00 0.00 0.00 4.61
29 30 1.553704 GAATTAGACCCGTGACACCCT 59.446 52.381 0.00 0.00 0.00 4.34
30 31 1.192428 ATTAGACCCGTGACACCCTC 58.808 55.000 0.00 0.00 0.00 4.30
31 32 1.246056 TTAGACCCGTGACACCCTCG 61.246 60.000 0.00 0.00 0.00 4.63
59 60 2.102757 GGCCACCCCGTTAAAAGAAAAA 59.897 45.455 0.00 0.00 0.00 1.94
112 113 7.186021 ACTAACTAAAACACATGAGAAACGG 57.814 36.000 0.00 0.00 0.00 4.44
113 114 6.987992 ACTAACTAAAACACATGAGAAACGGA 59.012 34.615 0.00 0.00 0.00 4.69
114 115 6.687081 AACTAAAACACATGAGAAACGGAA 57.313 33.333 0.00 0.00 0.00 4.30
115 116 6.300354 ACTAAAACACATGAGAAACGGAAG 57.700 37.500 0.00 0.00 0.00 3.46
118 119 6.391227 AAAACACATGAGAAACGGAAGAAT 57.609 33.333 0.00 0.00 0.00 2.40
134 135 6.086871 CGGAAGAATAAGAAGAAAAAGGCAC 58.913 40.000 0.00 0.00 0.00 5.01
138 139 9.313118 GAAGAATAAGAAGAAAAAGGCACAAAA 57.687 29.630 0.00 0.00 0.00 2.44
142 143 8.877808 ATAAGAAGAAAAAGGCACAAAAGAAG 57.122 30.769 0.00 0.00 0.00 2.85
156 157 6.030228 CACAAAAGAAGTTCTGAAACTGGTC 58.970 40.000 6.06 0.00 45.07 4.02
198 199 3.771577 ACCAAAACCACTCTAGAGGTG 57.228 47.619 23.50 17.29 38.99 4.00
202 203 5.726793 ACCAAAACCACTCTAGAGGTGATAT 59.273 40.000 23.50 3.35 38.99 1.63
207 208 7.973048 AACCACTCTAGAGGTGATATTGTTA 57.027 36.000 23.50 0.00 38.99 2.41
213 214 4.696479 AGAGGTGATATTGTTAGGCTGG 57.304 45.455 0.00 0.00 0.00 4.85
215 216 2.509548 AGGTGATATTGTTAGGCTGGCA 59.490 45.455 3.38 0.00 0.00 4.92
216 217 2.618709 GGTGATATTGTTAGGCTGGCAC 59.381 50.000 3.38 0.00 0.00 5.01
217 218 3.278574 GTGATATTGTTAGGCTGGCACA 58.721 45.455 3.38 0.00 0.00 4.57
228 229 2.840651 AGGCTGGCACATTTAGTAGAGT 59.159 45.455 3.38 0.00 38.20 3.24
243 244 0.475906 AGAGTGCCAAAGGTGAAGCT 59.524 50.000 0.00 0.00 0.00 3.74
248 249 1.228675 CCAAAGGTGAAGCTGGGCT 60.229 57.895 0.00 0.00 42.56 5.19
249 250 0.038166 CCAAAGGTGAAGCTGGGCTA 59.962 55.000 0.00 0.00 38.25 3.93
250 251 1.168714 CAAAGGTGAAGCTGGGCTAC 58.831 55.000 0.00 0.00 38.25 3.58
251 252 0.771127 AAAGGTGAAGCTGGGCTACA 59.229 50.000 0.00 0.00 38.25 2.74
257 258 2.121948 TGAAGCTGGGCTACATCTCAT 58.878 47.619 0.00 0.00 38.25 2.90
265 266 4.820897 TGGGCTACATCTCATAATAAGCG 58.179 43.478 0.00 0.00 0.00 4.68
271 272 8.356657 GGCTACATCTCATAATAAGCGAGATAT 58.643 37.037 0.00 0.00 43.08 1.63
273 274 9.592720 CTACATCTCATAATAAGCGAGATATCG 57.407 37.037 5.13 5.13 43.08 2.92
288 295 5.562890 CGAGATATCGAGAATAGTGCCAACA 60.563 44.000 2.99 0.00 34.64 3.33
307 314 8.691797 TGCCAACAATCTTTAATAGGATTTACC 58.308 33.333 0.00 0.00 39.35 2.85
413 422 0.328258 GACCTTTGAGCTTAGGCCCA 59.672 55.000 0.00 0.00 39.73 5.36
415 424 0.329596 CCTTTGAGCTTAGGCCCACT 59.670 55.000 0.00 0.00 39.73 4.00
418 427 2.202946 GAGCTTAGGCCCACTCGC 60.203 66.667 0.00 0.00 39.73 5.03
441 450 0.324645 GGGCTTCCATCCCACACATT 60.325 55.000 0.00 0.00 43.37 2.71
454 463 2.281484 ACATTTGTGGGCGCGACT 60.281 55.556 13.91 0.00 0.00 4.18
458 467 1.452145 ATTTGTGGGCGCGACTTTGT 61.452 50.000 13.91 0.00 0.00 2.83
461 470 2.357034 TGGGCGCGACTTTGTCTC 60.357 61.111 13.91 0.00 0.00 3.36
471 480 1.666189 GACTTTGTCTCGCCTATTGCC 59.334 52.381 0.00 0.00 36.24 4.52
491 503 0.322975 AGACGCAACATCTTGGCTCT 59.677 50.000 0.00 0.00 0.00 4.09
494 506 0.957395 CGCAACATCTTGGCTCTGGT 60.957 55.000 0.00 0.00 0.00 4.00
508 520 0.331278 TCTGGTGCCTGGTAATTGGG 59.669 55.000 0.00 0.00 0.00 4.12
510 522 1.000359 GGTGCCTGGTAATTGGGCT 60.000 57.895 12.37 0.00 45.45 5.19
526 538 0.254747 GGCTGGCCCACATACTGTTA 59.745 55.000 0.00 0.00 0.00 2.41
528 540 1.949525 GCTGGCCCACATACTGTTATG 59.050 52.381 0.00 0.00 41.01 1.90
726 800 0.108041 TCGTGATTTCCTAACGGGCC 60.108 55.000 0.00 0.00 37.87 5.80
728 802 1.093496 GTGATTTCCTAACGGGCCGG 61.093 60.000 31.78 12.61 34.39 6.13
729 803 2.124445 ATTTCCTAACGGGCCGGC 60.124 61.111 31.78 21.18 34.39 6.13
730 804 3.709348 ATTTCCTAACGGGCCGGCC 62.709 63.158 38.57 38.57 34.39 6.13
743 817 1.394618 GCCGGCCCACATAATGTTAA 58.605 50.000 18.11 0.00 0.00 2.01
747 821 4.429108 CCGGCCCACATAATGTTAAAAAG 58.571 43.478 0.00 0.00 0.00 2.27
748 822 4.158764 CCGGCCCACATAATGTTAAAAAGA 59.841 41.667 0.00 0.00 0.00 2.52
749 823 5.163457 CCGGCCCACATAATGTTAAAAAGAT 60.163 40.000 0.00 0.00 0.00 2.40
750 824 5.748152 CGGCCCACATAATGTTAAAAAGATG 59.252 40.000 0.00 0.00 0.00 2.90
751 825 5.523552 GGCCCACATAATGTTAAAAAGATGC 59.476 40.000 0.00 0.00 0.00 3.91
752 826 5.231991 GCCCACATAATGTTAAAAAGATGCG 59.768 40.000 0.00 0.00 0.00 4.73
753 827 6.329496 CCCACATAATGTTAAAAAGATGCGT 58.671 36.000 0.00 0.00 0.00 5.24
754 828 7.476667 CCCACATAATGTTAAAAAGATGCGTA 58.523 34.615 0.00 0.00 0.00 4.42
755 829 7.431084 CCCACATAATGTTAAAAAGATGCGTAC 59.569 37.037 0.00 0.00 0.00 3.67
756 830 7.965655 CCACATAATGTTAAAAAGATGCGTACA 59.034 33.333 0.00 0.00 0.00 2.90
757 831 9.502145 CACATAATGTTAAAAAGATGCGTACAT 57.498 29.630 0.00 0.00 39.98 2.29
758 832 9.502145 ACATAATGTTAAAAAGATGCGTACATG 57.498 29.630 0.00 0.00 36.35 3.21
759 833 9.502145 CATAATGTTAAAAAGATGCGTACATGT 57.498 29.630 2.69 2.69 36.35 3.21
761 835 5.150683 TGTTAAAAAGATGCGTACATGTGC 58.849 37.500 9.11 6.17 36.35 4.57
763 837 1.720805 AAAGATGCGTACATGTGCGA 58.279 45.000 35.54 21.90 41.16 5.10
764 838 1.280982 AAGATGCGTACATGTGCGAG 58.719 50.000 35.54 12.06 41.16 5.03
765 839 0.455815 AGATGCGTACATGTGCGAGA 59.544 50.000 35.54 22.44 41.16 4.04
766 840 0.848942 GATGCGTACATGTGCGAGAG 59.151 55.000 35.54 10.99 41.16 3.20
767 841 0.455815 ATGCGTACATGTGCGAGAGA 59.544 50.000 35.54 17.83 41.16 3.10
768 842 0.456142 TGCGTACATGTGCGAGAGAC 60.456 55.000 35.54 19.60 41.16 3.36
769 843 0.179161 GCGTACATGTGCGAGAGACT 60.179 55.000 35.54 0.00 41.16 3.24
770 844 1.732732 GCGTACATGTGCGAGAGACTT 60.733 52.381 35.54 0.00 41.16 3.01
771 845 2.596452 CGTACATGTGCGAGAGACTTT 58.404 47.619 29.28 0.00 41.16 2.66
772 846 3.754955 CGTACATGTGCGAGAGACTTTA 58.245 45.455 29.28 0.00 41.16 1.85
773 847 3.542704 CGTACATGTGCGAGAGACTTTAC 59.457 47.826 29.28 3.52 41.16 2.01
774 848 3.944055 ACATGTGCGAGAGACTTTACT 57.056 42.857 0.00 0.00 0.00 2.24
775 849 5.446875 CGTACATGTGCGAGAGACTTTACTA 60.447 44.000 29.28 0.00 41.16 1.82
776 850 4.987832 ACATGTGCGAGAGACTTTACTAG 58.012 43.478 0.00 0.00 0.00 2.57
777 851 3.489180 TGTGCGAGAGACTTTACTAGC 57.511 47.619 0.00 0.00 35.83 3.42
778 852 3.082548 TGTGCGAGAGACTTTACTAGCT 58.917 45.455 0.00 0.00 36.15 3.32
779 853 3.119814 TGTGCGAGAGACTTTACTAGCTG 60.120 47.826 0.00 0.00 36.15 4.24
780 854 2.159366 TGCGAGAGACTTTACTAGCTGC 60.159 50.000 0.00 0.00 36.15 5.25
781 855 2.710760 CGAGAGACTTTACTAGCTGCG 58.289 52.381 0.00 0.00 0.00 5.18
782 856 2.352034 CGAGAGACTTTACTAGCTGCGA 59.648 50.000 0.00 0.00 0.00 5.10
783 857 3.002862 CGAGAGACTTTACTAGCTGCGAT 59.997 47.826 0.00 0.00 0.00 4.58
784 858 4.496673 CGAGAGACTTTACTAGCTGCGATT 60.497 45.833 0.00 0.00 0.00 3.34
785 859 5.331876 AGAGACTTTACTAGCTGCGATTT 57.668 39.130 0.00 0.00 0.00 2.17
786 860 5.725362 AGAGACTTTACTAGCTGCGATTTT 58.275 37.500 0.00 0.00 0.00 1.82
787 861 6.864342 AGAGACTTTACTAGCTGCGATTTTA 58.136 36.000 0.00 0.00 0.00 1.52
788 862 7.493367 AGAGACTTTACTAGCTGCGATTTTAT 58.507 34.615 0.00 0.00 0.00 1.40
789 863 7.982354 AGAGACTTTACTAGCTGCGATTTTATT 59.018 33.333 0.00 0.00 0.00 1.40
790 864 8.494016 AGACTTTACTAGCTGCGATTTTATTT 57.506 30.769 0.00 0.00 0.00 1.40
791 865 8.947115 AGACTTTACTAGCTGCGATTTTATTTT 58.053 29.630 0.00 0.00 0.00 1.82
792 866 9.556030 GACTTTACTAGCTGCGATTTTATTTTT 57.444 29.630 0.00 0.00 0.00 1.94
793 867 9.341899 ACTTTACTAGCTGCGATTTTATTTTTG 57.658 29.630 0.00 0.00 0.00 2.44
794 868 9.554724 CTTTACTAGCTGCGATTTTATTTTTGA 57.445 29.630 0.00 0.00 0.00 2.69
795 869 9.900710 TTTACTAGCTGCGATTTTATTTTTGAA 57.099 25.926 0.00 0.00 0.00 2.69
796 870 9.554724 TTACTAGCTGCGATTTTATTTTTGAAG 57.445 29.630 0.00 0.00 0.00 3.02
797 871 7.029563 ACTAGCTGCGATTTTATTTTTGAAGG 58.970 34.615 0.00 0.00 0.00 3.46
798 872 6.024552 AGCTGCGATTTTATTTTTGAAGGA 57.975 33.333 0.00 0.00 0.00 3.36
799 873 5.863935 AGCTGCGATTTTATTTTTGAAGGAC 59.136 36.000 0.00 0.00 0.00 3.85
800 874 5.220024 GCTGCGATTTTATTTTTGAAGGACG 60.220 40.000 0.00 0.00 0.00 4.79
801 875 5.764131 TGCGATTTTATTTTTGAAGGACGT 58.236 33.333 0.00 0.00 0.00 4.34
802 876 6.900189 TGCGATTTTATTTTTGAAGGACGTA 58.100 32.000 0.00 0.00 0.00 3.57
803 877 7.018826 TGCGATTTTATTTTTGAAGGACGTAG 58.981 34.615 0.00 0.00 0.00 3.51
851 925 9.832445 TTTAGCTAAGTTTTCTTCTTCTTCAGA 57.168 29.630 6.24 0.00 40.91 3.27
853 927 8.321650 AGCTAAGTTTTCTTCTTCTTCAGATG 57.678 34.615 0.00 0.00 40.91 2.90
854 928 7.936301 AGCTAAGTTTTCTTCTTCTTCAGATGT 59.064 33.333 0.00 0.00 40.91 3.06
855 929 8.014517 GCTAAGTTTTCTTCTTCTTCAGATGTG 58.985 37.037 0.00 0.00 40.91 3.21
856 930 6.874288 AGTTTTCTTCTTCTTCAGATGTGG 57.126 37.500 0.00 0.00 0.00 4.17
857 931 5.767168 AGTTTTCTTCTTCTTCAGATGTGGG 59.233 40.000 0.00 0.00 0.00 4.61
858 932 4.982241 TTCTTCTTCTTCAGATGTGGGT 57.018 40.909 0.00 0.00 0.00 4.51
859 933 4.543590 TCTTCTTCTTCAGATGTGGGTC 57.456 45.455 0.00 0.00 0.00 4.46
860 934 3.056536 TCTTCTTCTTCAGATGTGGGTCG 60.057 47.826 0.00 0.00 0.00 4.79
861 935 1.550524 TCTTCTTCAGATGTGGGTCGG 59.449 52.381 0.00 0.00 0.00 4.79
862 936 1.276421 CTTCTTCAGATGTGGGTCGGT 59.724 52.381 0.00 0.00 0.00 4.69
863 937 2.225382 TCTTCAGATGTGGGTCGGTA 57.775 50.000 0.00 0.00 0.00 4.02
864 938 1.822990 TCTTCAGATGTGGGTCGGTAC 59.177 52.381 0.00 0.00 0.00 3.34
865 939 1.825474 CTTCAGATGTGGGTCGGTACT 59.175 52.381 0.00 0.00 0.00 2.73
866 940 1.933021 TCAGATGTGGGTCGGTACTT 58.067 50.000 0.00 0.00 0.00 2.24
867 941 1.548719 TCAGATGTGGGTCGGTACTTG 59.451 52.381 0.00 0.00 0.00 3.16
868 942 1.275291 CAGATGTGGGTCGGTACTTGT 59.725 52.381 0.00 0.00 0.00 3.16
869 943 1.275291 AGATGTGGGTCGGTACTTGTG 59.725 52.381 0.00 0.00 0.00 3.33
870 944 0.323629 ATGTGGGTCGGTACTTGTGG 59.676 55.000 0.00 0.00 0.00 4.17
871 945 0.759812 TGTGGGTCGGTACTTGTGGA 60.760 55.000 0.00 0.00 0.00 4.02
872 946 0.611714 GTGGGTCGGTACTTGTGGAT 59.388 55.000 0.00 0.00 0.00 3.41
873 947 0.611200 TGGGTCGGTACTTGTGGATG 59.389 55.000 0.00 0.00 0.00 3.51
874 948 0.107848 GGGTCGGTACTTGTGGATGG 60.108 60.000 0.00 0.00 0.00 3.51
875 949 0.899720 GGTCGGTACTTGTGGATGGA 59.100 55.000 0.00 0.00 0.00 3.41
876 950 1.276989 GGTCGGTACTTGTGGATGGAA 59.723 52.381 0.00 0.00 0.00 3.53
877 951 2.093128 GGTCGGTACTTGTGGATGGAAT 60.093 50.000 0.00 0.00 0.00 3.01
878 952 3.195661 GTCGGTACTTGTGGATGGAATC 58.804 50.000 0.00 0.00 44.55 2.52
879 953 3.104512 TCGGTACTTGTGGATGGAATCT 58.895 45.455 0.00 0.00 44.71 2.40
880 954 3.132289 TCGGTACTTGTGGATGGAATCTC 59.868 47.826 0.00 0.00 44.71 2.75
881 955 3.118775 CGGTACTTGTGGATGGAATCTCA 60.119 47.826 0.00 0.00 44.71 3.27
882 956 4.192317 GGTACTTGTGGATGGAATCTCAC 58.808 47.826 0.00 0.00 44.71 3.51
883 957 3.356529 ACTTGTGGATGGAATCTCACC 57.643 47.619 0.00 0.00 44.71 4.02
884 958 2.644299 ACTTGTGGATGGAATCTCACCA 59.356 45.455 0.00 0.00 44.71 4.17
885 959 2.787473 TGTGGATGGAATCTCACCAC 57.213 50.000 0.00 0.00 44.71 4.16
886 960 1.281867 TGTGGATGGAATCTCACCACC 59.718 52.381 0.00 0.00 46.92 4.61
887 961 1.281867 GTGGATGGAATCTCACCACCA 59.718 52.381 0.00 0.00 44.71 4.17
888 962 1.281867 TGGATGGAATCTCACCACCAC 59.718 52.381 0.00 0.00 44.71 4.16
889 963 1.408822 GGATGGAATCTCACCACCACC 60.409 57.143 0.00 0.00 44.71 4.61
890 964 0.625849 ATGGAATCTCACCACCACCC 59.374 55.000 0.00 0.00 40.36 4.61
891 965 1.078426 GGAATCTCACCACCACCCG 60.078 63.158 0.00 0.00 0.00 5.28
892 966 1.677552 GAATCTCACCACCACCCGT 59.322 57.895 0.00 0.00 0.00 5.28
893 967 0.036306 GAATCTCACCACCACCCGTT 59.964 55.000 0.00 0.00 0.00 4.44
894 968 0.476771 AATCTCACCACCACCCGTTT 59.523 50.000 0.00 0.00 0.00 3.60
895 969 0.250727 ATCTCACCACCACCCGTTTG 60.251 55.000 0.00 0.00 0.00 2.93
896 970 1.153046 CTCACCACCACCCGTTTGT 60.153 57.895 0.00 0.00 0.00 2.83
897 971 0.107081 CTCACCACCACCCGTTTGTA 59.893 55.000 0.00 0.00 0.00 2.41
898 972 0.545171 TCACCACCACCCGTTTGTAA 59.455 50.000 0.00 0.00 0.00 2.41
899 973 1.143277 TCACCACCACCCGTTTGTAAT 59.857 47.619 0.00 0.00 0.00 1.89
900 974 1.957877 CACCACCACCCGTTTGTAATT 59.042 47.619 0.00 0.00 0.00 1.40
901 975 2.030628 CACCACCACCCGTTTGTAATTC 60.031 50.000 0.00 0.00 0.00 2.17
902 976 1.542472 CCACCACCCGTTTGTAATTCC 59.458 52.381 0.00 0.00 0.00 3.01
903 977 2.510613 CACCACCCGTTTGTAATTCCT 58.489 47.619 0.00 0.00 0.00 3.36
904 978 2.227865 CACCACCCGTTTGTAATTCCTG 59.772 50.000 0.00 0.00 0.00 3.86
905 979 2.158579 ACCACCCGTTTGTAATTCCTGT 60.159 45.455 0.00 0.00 0.00 4.00
906 980 3.072768 ACCACCCGTTTGTAATTCCTGTA 59.927 43.478 0.00 0.00 0.00 2.74
907 981 4.073549 CCACCCGTTTGTAATTCCTGTAA 58.926 43.478 0.00 0.00 0.00 2.41
908 982 4.519730 CCACCCGTTTGTAATTCCTGTAAA 59.480 41.667 0.00 0.00 0.00 2.01
909 983 5.184287 CCACCCGTTTGTAATTCCTGTAAAT 59.816 40.000 0.00 0.00 0.00 1.40
910 984 6.319399 CACCCGTTTGTAATTCCTGTAAATC 58.681 40.000 0.00 0.00 0.00 2.17
911 985 5.122711 ACCCGTTTGTAATTCCTGTAAATCG 59.877 40.000 0.00 0.00 0.00 3.34
912 986 5.122711 CCCGTTTGTAATTCCTGTAAATCGT 59.877 40.000 0.00 0.00 0.00 3.73
913 987 6.313411 CCCGTTTGTAATTCCTGTAAATCGTA 59.687 38.462 0.00 0.00 0.00 3.43
914 988 7.175410 CCGTTTGTAATTCCTGTAAATCGTAC 58.825 38.462 0.00 0.00 0.00 3.67
915 989 7.063780 CCGTTTGTAATTCCTGTAAATCGTACT 59.936 37.037 0.00 0.00 0.00 2.73
916 990 8.106348 CGTTTGTAATTCCTGTAAATCGTACTC 58.894 37.037 0.00 0.00 0.00 2.59
917 991 8.385858 GTTTGTAATTCCTGTAAATCGTACTCC 58.614 37.037 0.00 0.00 0.00 3.85
918 992 7.172868 TGTAATTCCTGTAAATCGTACTCCA 57.827 36.000 0.00 0.00 0.00 3.86
919 993 7.613585 TGTAATTCCTGTAAATCGTACTCCAA 58.386 34.615 0.00 0.00 0.00 3.53
920 994 8.095792 TGTAATTCCTGTAAATCGTACTCCAAA 58.904 33.333 0.00 0.00 0.00 3.28
921 995 6.980051 ATTCCTGTAAATCGTACTCCAAAC 57.020 37.500 0.00 0.00 0.00 2.93
922 996 5.471556 TCCTGTAAATCGTACTCCAAACA 57.528 39.130 0.00 0.00 0.00 2.83
923 997 6.045072 TCCTGTAAATCGTACTCCAAACAT 57.955 37.500 0.00 0.00 0.00 2.71
924 998 6.469410 TCCTGTAAATCGTACTCCAAACATT 58.531 36.000 0.00 0.00 0.00 2.71
925 999 6.370442 TCCTGTAAATCGTACTCCAAACATTG 59.630 38.462 0.00 0.00 0.00 2.82
926 1000 6.370442 CCTGTAAATCGTACTCCAAACATTGA 59.630 38.462 0.00 0.00 0.00 2.57
927 1001 7.094975 CCTGTAAATCGTACTCCAAACATTGAA 60.095 37.037 0.00 0.00 0.00 2.69
928 1002 8.330466 TGTAAATCGTACTCCAAACATTGAAT 57.670 30.769 0.00 0.00 0.00 2.57
929 1003 9.438228 TGTAAATCGTACTCCAAACATTGAATA 57.562 29.630 0.00 0.00 0.00 1.75
932 1006 9.840427 AAATCGTACTCCAAACATTGAATAAAG 57.160 29.630 0.00 0.00 0.00 1.85
933 1007 7.972832 TCGTACTCCAAACATTGAATAAAGT 57.027 32.000 0.00 0.00 0.00 2.66
934 1008 7.802738 TCGTACTCCAAACATTGAATAAAGTG 58.197 34.615 0.00 0.00 0.00 3.16
935 1009 7.442969 TCGTACTCCAAACATTGAATAAAGTGT 59.557 33.333 0.00 0.00 0.00 3.55
936 1010 7.533900 CGTACTCCAAACATTGAATAAAGTGTG 59.466 37.037 0.00 0.00 0.00 3.82
937 1011 6.748132 ACTCCAAACATTGAATAAAGTGTGG 58.252 36.000 0.00 0.00 40.09 4.17
938 1012 6.323739 ACTCCAAACATTGAATAAAGTGTGGT 59.676 34.615 0.00 0.00 39.77 4.16
939 1013 7.118496 TCCAAACATTGAATAAAGTGTGGTT 57.882 32.000 0.00 0.00 39.77 3.67
940 1014 7.560368 TCCAAACATTGAATAAAGTGTGGTTT 58.440 30.769 0.00 0.00 39.77 3.27
941 1015 8.696374 TCCAAACATTGAATAAAGTGTGGTTTA 58.304 29.630 0.00 0.00 39.77 2.01
942 1016 8.760569 CCAAACATTGAATAAAGTGTGGTTTAC 58.239 33.333 0.00 0.00 35.17 2.01
943 1017 8.760569 CAAACATTGAATAAAGTGTGGTTTACC 58.239 33.333 0.00 0.00 0.00 2.85
944 1018 6.988522 ACATTGAATAAAGTGTGGTTTACCC 58.011 36.000 0.00 0.00 34.29 3.69
945 1019 6.014925 ACATTGAATAAAGTGTGGTTTACCCC 60.015 38.462 0.00 0.00 34.29 4.95
946 1020 5.327737 TGAATAAAGTGTGGTTTACCCCT 57.672 39.130 0.00 0.00 34.29 4.79
947 1021 6.451292 TGAATAAAGTGTGGTTTACCCCTA 57.549 37.500 0.00 0.00 34.29 3.53
948 1022 6.850234 TGAATAAAGTGTGGTTTACCCCTAA 58.150 36.000 0.00 0.00 34.29 2.69
949 1023 7.296098 TGAATAAAGTGTGGTTTACCCCTAAA 58.704 34.615 0.00 0.00 34.29 1.85
976 1050 7.468141 AAAGGAAGGCTACCAATAAAAGAAG 57.532 36.000 0.00 0.00 0.00 2.85
981 1055 6.079712 AGGCTACCAATAAAAGAAGTCCAT 57.920 37.500 0.00 0.00 0.00 3.41
982 1056 6.494059 AGGCTACCAATAAAAGAAGTCCATT 58.506 36.000 0.00 0.00 0.00 3.16
983 1057 6.603599 AGGCTACCAATAAAAGAAGTCCATTC 59.396 38.462 0.00 0.00 38.28 2.67
1368 1442 4.596180 CACGGCATCGCGATTGCC 62.596 66.667 33.81 33.81 44.69 4.52
1392 1474 1.599047 CAAGCCACGATCACTCCCT 59.401 57.895 0.00 0.00 0.00 4.20
1410 1492 2.124278 GGAATTCTCACCCGGGGC 60.124 66.667 27.92 2.90 0.00 5.80
1411 1493 2.680370 GGAATTCTCACCCGGGGCT 61.680 63.158 27.92 0.00 0.00 5.19
1420 1502 3.009115 CCCGGGGCTTCTTCCTCA 61.009 66.667 14.71 0.00 0.00 3.86
1423 1505 1.626356 CCGGGGCTTCTTCCTCATCA 61.626 60.000 0.00 0.00 0.00 3.07
1500 1582 4.003788 CGTGCCCGACCTGGACTT 62.004 66.667 0.00 0.00 42.00 3.01
1575 1657 4.704833 GGCTGCGGCAGGACTCAA 62.705 66.667 29.44 0.00 40.87 3.02
1623 1705 1.136500 GGAGGAGATACGTGACAACCC 59.864 57.143 0.00 0.00 0.00 4.11
1672 1754 8.740906 CAGTATTACTAGTCCACCGATATCAAT 58.259 37.037 0.00 0.00 0.00 2.57
1713 1797 9.948964 TTGTCCTATATCCAACATATTGATCTG 57.051 33.333 0.00 0.00 38.15 2.90
1731 1829 3.411446 TCTGTGCTGTGATTGTTAAGGG 58.589 45.455 0.00 0.00 0.00 3.95
1743 1841 2.161537 TTAAGGGTTTGGGCGGGGA 61.162 57.895 0.00 0.00 0.00 4.81
1747 1845 2.359011 GGTTTGGGCGGGGATTCT 59.641 61.111 0.00 0.00 0.00 2.40
1748 1846 1.753078 GGTTTGGGCGGGGATTCTC 60.753 63.158 0.00 0.00 0.00 2.87
1765 1866 5.182190 GGATTCTCTGGTTCTTCTGAAAACC 59.818 44.000 19.03 19.03 44.29 3.27
1766 1867 4.086706 TCTCTGGTTCTTCTGAAAACCC 57.913 45.455 21.16 10.23 43.55 4.11
1773 1874 1.073284 TCTTCTGAAAACCCGGGAAGG 59.927 52.381 32.02 10.76 35.49 3.46
1774 1875 0.538746 TTCTGAAAACCCGGGAAGGC 60.539 55.000 32.02 14.34 39.21 4.35
1778 1879 2.154798 GAAAACCCGGGAAGGCTTGC 62.155 60.000 32.02 10.64 39.21 4.01
1788 1889 3.428862 CGGGAAGGCTTGCGATTAATTTT 60.429 43.478 12.78 0.00 0.00 1.82
1789 1890 4.112634 GGGAAGGCTTGCGATTAATTTTC 58.887 43.478 12.78 0.00 0.00 2.29
1790 1891 4.142160 GGGAAGGCTTGCGATTAATTTTCT 60.142 41.667 12.78 0.00 0.00 2.52
1791 1892 5.037385 GGAAGGCTTGCGATTAATTTTCTC 58.963 41.667 3.46 0.00 0.00 2.87
1792 1893 5.163612 GGAAGGCTTGCGATTAATTTTCTCT 60.164 40.000 3.46 0.00 0.00 3.10
1793 1894 6.038271 GGAAGGCTTGCGATTAATTTTCTCTA 59.962 38.462 3.46 0.00 0.00 2.43
1794 1895 6.610741 AGGCTTGCGATTAATTTTCTCTAG 57.389 37.500 0.00 0.00 0.00 2.43
1795 1896 5.008118 AGGCTTGCGATTAATTTTCTCTAGC 59.992 40.000 0.00 6.19 0.00 3.42
1796 1897 5.008118 GGCTTGCGATTAATTTTCTCTAGCT 59.992 40.000 11.33 0.00 30.76 3.32
1797 1898 6.458888 GGCTTGCGATTAATTTTCTCTAGCTT 60.459 38.462 0.00 0.00 30.76 3.74
1798 1899 6.413235 GCTTGCGATTAATTTTCTCTAGCTTG 59.587 38.462 0.00 0.00 0.00 4.01
1799 1900 7.609760 TTGCGATTAATTTTCTCTAGCTTGA 57.390 32.000 0.00 0.00 0.00 3.02
1800 1901 7.609760 TGCGATTAATTTTCTCTAGCTTGAA 57.390 32.000 0.00 0.00 0.00 2.69
1801 1902 7.464358 TGCGATTAATTTTCTCTAGCTTGAAC 58.536 34.615 0.00 0.00 0.00 3.18
1802 1903 7.119116 TGCGATTAATTTTCTCTAGCTTGAACA 59.881 33.333 0.00 0.00 0.00 3.18
1803 1904 7.637907 GCGATTAATTTTCTCTAGCTTGAACAG 59.362 37.037 0.00 0.00 0.00 3.16
1804 1905 8.873830 CGATTAATTTTCTCTAGCTTGAACAGA 58.126 33.333 0.00 0.00 0.00 3.41
1805 1906 9.980780 GATTAATTTTCTCTAGCTTGAACAGAC 57.019 33.333 0.00 0.00 0.00 3.51
1806 1907 9.732130 ATTAATTTTCTCTAGCTTGAACAGACT 57.268 29.630 0.00 0.00 0.00 3.24
1808 1909 8.541133 AATTTTCTCTAGCTTGAACAGACTAC 57.459 34.615 0.00 0.00 0.00 2.73
1809 1910 6.902771 TTTCTCTAGCTTGAACAGACTACT 57.097 37.500 0.00 0.00 0.00 2.57
1810 1911 7.997773 TTTCTCTAGCTTGAACAGACTACTA 57.002 36.000 0.00 0.00 0.00 1.82
1811 1912 6.988622 TCTCTAGCTTGAACAGACTACTAC 57.011 41.667 0.00 0.00 0.00 2.73
1812 1913 6.713276 TCTCTAGCTTGAACAGACTACTACT 58.287 40.000 0.00 0.00 0.00 2.57
1813 1914 7.849160 TCTCTAGCTTGAACAGACTACTACTA 58.151 38.462 0.00 0.00 0.00 1.82
1814 1915 8.487848 TCTCTAGCTTGAACAGACTACTACTAT 58.512 37.037 0.00 0.00 0.00 2.12
1815 1916 9.116067 CTCTAGCTTGAACAGACTACTACTATT 57.884 37.037 0.00 0.00 0.00 1.73
1816 1917 9.463902 TCTAGCTTGAACAGACTACTACTATTT 57.536 33.333 0.00 0.00 0.00 1.40
1839 1940 9.927668 ATTTATTTATTTATTTGCGGGGATGAG 57.072 29.630 0.00 0.00 0.00 2.90
1852 1953 2.703007 GGGGATGAGCAGACTGATACTT 59.297 50.000 6.65 0.00 0.00 2.24
1865 1966 7.201565 GCAGACTGATACTTAACCTTGATGAAC 60.202 40.741 6.65 0.00 0.00 3.18
1866 1967 7.819415 CAGACTGATACTTAACCTTGATGAACA 59.181 37.037 0.00 0.00 0.00 3.18
1868 1969 6.595716 ACTGATACTTAACCTTGATGAACAGC 59.404 38.462 0.00 0.00 0.00 4.40
1870 1971 4.098914 ACTTAACCTTGATGAACAGCCA 57.901 40.909 0.00 0.00 0.00 4.75
1872 1973 2.664402 AACCTTGATGAACAGCCACT 57.336 45.000 0.00 0.00 0.00 4.00
1873 1974 1.901591 ACCTTGATGAACAGCCACTG 58.098 50.000 0.00 0.00 37.52 3.66
1874 1975 1.421268 ACCTTGATGAACAGCCACTGA 59.579 47.619 0.78 0.00 35.18 3.41
1876 1977 3.264193 ACCTTGATGAACAGCCACTGATA 59.736 43.478 0.78 0.00 35.18 2.15
1877 1978 4.080129 ACCTTGATGAACAGCCACTGATAT 60.080 41.667 0.78 0.00 35.18 1.63
1878 1979 4.514441 CCTTGATGAACAGCCACTGATATC 59.486 45.833 0.78 0.00 35.18 1.63
1891 1995 5.751680 CCACTGATATCAAATTTACCGCAG 58.248 41.667 6.90 0.00 0.00 5.18
1916 2020 6.726490 AGCTACTAATTTACCAGATCGGAA 57.274 37.500 10.05 0.00 38.63 4.30
1969 2073 4.819630 CAGTGGTGGAGTAGCAGTTAAAAA 59.180 41.667 0.00 0.00 38.35 1.94
1972 2076 5.529800 GTGGTGGAGTAGCAGTTAAAAAGAA 59.470 40.000 0.00 0.00 37.49 2.52
1982 2086 7.003939 AGCAGTTAAAAAGAAATTGTTGCAC 57.996 32.000 0.00 0.00 0.00 4.57
1988 2092 3.375782 AAGAAATTGTTGCACTGGAGC 57.624 42.857 0.00 0.00 0.00 4.70
1992 2096 1.708341 ATTGTTGCACTGGAGCCTTT 58.292 45.000 0.00 0.00 0.00 3.11
2049 2153 3.379688 TGTTTGTACTTGCATGCAGTTCA 59.620 39.130 21.50 19.59 0.00 3.18
2051 2155 2.849942 TGTACTTGCATGCAGTTCACT 58.150 42.857 21.50 3.53 0.00 3.41
2067 2177 7.842525 CAGTTCACTGCACTAGTTTATTTTG 57.157 36.000 0.00 0.00 37.60 2.44
2074 2184 4.752604 TGCACTAGTTTATTTTGCGACTCA 59.247 37.500 0.00 0.00 35.90 3.41
2324 2450 6.498651 TGGAAATTGGGGCTTAATACTTTGAA 59.501 34.615 0.00 0.00 0.00 2.69
2441 2575 2.845659 AGGATGTCCTGATGGTGGTAA 58.154 47.619 0.00 0.00 46.55 2.85
2450 2584 1.276989 TGATGGTGGTAACGAAGACCC 59.723 52.381 0.00 0.00 42.51 4.46
2452 2586 0.971386 TGGTGGTAACGAAGACCCTC 59.029 55.000 0.00 0.00 42.51 4.30
2488 2622 7.010923 CAGATGAATTCTCTTACACTAGCAACC 59.989 40.741 7.05 0.00 29.93 3.77
2505 2639 0.984995 ACCTTGAGTACTTGCCTCCC 59.015 55.000 0.00 0.00 0.00 4.30
2509 2643 1.729586 TGAGTACTTGCCTCCCTTGT 58.270 50.000 0.00 0.00 0.00 3.16
2632 2766 3.457012 TGAGATGCTTGATTCCATCTGGA 59.543 43.478 7.77 0.00 45.93 3.86
2695 2829 4.678509 TGGATACACAATTCTTCGTTGC 57.321 40.909 0.00 0.00 46.17 4.17
2888 3025 2.440627 TGATATGCCTCAACCAGAGCAT 59.559 45.455 1.62 1.62 43.31 3.79
2929 3069 8.246180 CCTTTATGCTTTCTTCTTTATTCAGCA 58.754 33.333 0.00 0.00 39.95 4.41
2930 3070 9.798994 CTTTATGCTTTCTTCTTTATTCAGCAT 57.201 29.630 8.65 8.65 45.90 3.79
3012 3152 6.115446 TGTAGGAAGAATGCTATTGGTTCTG 58.885 40.000 0.00 0.00 32.85 3.02
3013 3153 5.184892 AGGAAGAATGCTATTGGTTCTGT 57.815 39.130 0.00 0.00 32.85 3.41
3014 3154 4.946157 AGGAAGAATGCTATTGGTTCTGTG 59.054 41.667 0.00 0.00 32.85 3.66
3056 3202 4.847198 TGCAGTCTCATTGATATGTGGTT 58.153 39.130 0.00 0.00 33.34 3.67
3141 3291 6.042777 TGCTTCATACTATCTTTTCCTCACG 58.957 40.000 0.00 0.00 0.00 4.35
3159 3310 1.622312 ACGAGGAAAACTAGTGACCCC 59.378 52.381 0.00 0.00 33.49 4.95
3160 3311 1.403780 CGAGGAAAACTAGTGACCCCG 60.404 57.143 0.00 0.00 0.00 5.73
3161 3312 0.981943 AGGAAAACTAGTGACCCCGG 59.018 55.000 0.00 0.00 0.00 5.73
3181 3332 0.788391 CCGTGACTCTTTTGGTACGC 59.212 55.000 0.00 0.00 0.00 4.42
3189 3340 5.049954 TGACTCTTTTGGTACGCAATAACAC 60.050 40.000 0.00 0.00 26.83 3.32
3190 3341 5.061179 ACTCTTTTGGTACGCAATAACACT 58.939 37.500 0.00 0.00 26.83 3.55
3247 3401 9.941325 ATGTTATTCCTTTGCAAATCATGTTTA 57.059 25.926 13.23 0.00 0.00 2.01
3484 3638 3.821033 ACATGTCTTAAAGCGGCTTCTTT 59.179 39.130 16.70 2.96 39.40 2.52
3503 3657 6.130298 TCTTTGCGAAGAAGAATTTGAACA 57.870 33.333 14.27 0.00 38.91 3.18
3531 3685 1.073603 AGGCTTGCTCTTGAGAAAGCT 59.926 47.619 30.90 19.64 43.58 3.74
3549 3703 1.745141 GCTTTGGACTCGATGGCAGAT 60.745 52.381 0.00 0.00 0.00 2.90
3552 3706 1.775385 TGGACTCGATGGCAGATGTA 58.225 50.000 0.00 0.00 0.00 2.29
3570 3724 2.360801 TGTAGTTTTCTGCCCAAAGTGC 59.639 45.455 0.00 0.00 0.00 4.40
3583 3737 2.544694 CCAAAGTGCGTAATTGGTTGCA 60.545 45.455 10.11 0.00 38.99 4.08
3693 3847 2.884639 GTGCCTAACTCCAGAGCAAAAA 59.115 45.455 0.00 0.00 34.79 1.94
3724 3878 2.410730 CGGAAGGTAAACGTGCAACTAG 59.589 50.000 0.00 0.00 31.75 2.57
3764 3933 2.892852 ACCAAACAAGCATGCACTACAT 59.107 40.909 21.98 0.00 40.66 2.29
3777 3946 2.639065 CACTACATGTTTATGGGCGGT 58.361 47.619 2.30 0.00 38.66 5.68
3825 3997 7.781324 ATTGAATTATTGTGACCCAAAGACT 57.219 32.000 0.00 0.00 36.44 3.24
3830 4002 8.877864 AATTATTGTGACCCAAAGACTATGAA 57.122 30.769 0.00 0.00 36.44 2.57
3838 4010 4.946157 ACCCAAAGACTATGAAGCAATGAG 59.054 41.667 0.00 0.00 0.00 2.90
3839 4011 4.946157 CCCAAAGACTATGAAGCAATGAGT 59.054 41.667 0.00 0.00 0.00 3.41
3840 4012 5.416952 CCCAAAGACTATGAAGCAATGAGTT 59.583 40.000 0.00 0.00 0.00 3.01
3841 4013 6.404074 CCCAAAGACTATGAAGCAATGAGTTC 60.404 42.308 0.00 0.00 0.00 3.01
3842 4014 6.246449 CAAAGACTATGAAGCAATGAGTTCG 58.754 40.000 0.00 0.00 0.00 3.95
3851 4023 8.895932 ATGAAGCAATGAGTTCGTTTATTTAC 57.104 30.769 0.00 0.00 0.00 2.01
3855 4027 7.882179 AGCAATGAGTTCGTTTATTTACCTTT 58.118 30.769 0.00 0.00 0.00 3.11
3967 4143 2.420890 GAGAGGGAGATGGCGCAG 59.579 66.667 10.83 0.00 0.00 5.18
4096 4272 3.504520 GTGGGAAATACTTTTGCTTCCGA 59.495 43.478 0.00 0.00 38.60 4.55
4138 4314 3.495001 GCTACGATCATTTCAAGTAGGCC 59.505 47.826 0.00 0.00 36.30 5.19
4679 4855 6.204882 CGGTGAGAGAAATTTCAAGGTAAACT 59.795 38.462 19.99 6.06 0.00 2.66
4768 4944 3.906008 CGTTGTGTGACGAATCCAATTTC 59.094 43.478 0.00 0.00 45.47 2.17
4878 5056 1.929836 CGAGCCAGCTATTGTCAACTC 59.070 52.381 0.00 0.00 0.00 3.01
4929 5107 1.146930 GAGCGAGCATTGGGGATCA 59.853 57.895 0.00 0.00 0.00 2.92
5020 5198 1.625616 AGGTCGAGTTTGCGATTACG 58.374 50.000 0.00 0.00 42.82 3.18
5055 5233 7.850982 GCTATGGTGAACTGTACAATTTTATCG 59.149 37.037 0.00 0.00 0.00 2.92
5057 5235 6.893759 TGGTGAACTGTACAATTTTATCGTG 58.106 36.000 0.00 0.00 0.00 4.35
5088 6823 6.152661 GTGTGAAATATGGGAGAAATGGTCAA 59.847 38.462 0.00 0.00 0.00 3.18
5180 6915 1.208358 CAGTTCACACTGCATGCGG 59.792 57.895 25.08 25.08 44.16 5.69
5238 6974 1.235724 GGAGCTAACAAGCCAACGTT 58.764 50.000 0.00 0.00 34.90 3.99
5256 6992 3.241322 ACGTTCGCTCGTTATAAATTCCG 59.759 43.478 0.00 0.00 41.37 4.30
5275 7011 8.882415 AATTCCGTACGAACAATGATTAGTAT 57.118 30.769 18.76 0.00 31.79 2.12
5276 7012 7.688478 TTCCGTACGAACAATGATTAGTATG 57.312 36.000 18.76 0.00 0.00 2.39
5277 7013 6.798482 TCCGTACGAACAATGATTAGTATGT 58.202 36.000 18.76 0.00 29.50 2.29
5278 7014 7.929159 TCCGTACGAACAATGATTAGTATGTA 58.071 34.615 18.76 0.00 29.50 2.29
5279 7015 8.404765 TCCGTACGAACAATGATTAGTATGTAA 58.595 33.333 18.76 0.00 29.50 2.41
5280 7016 8.688184 CCGTACGAACAATGATTAGTATGTAAG 58.312 37.037 18.76 0.00 29.50 2.34
5281 7017 9.229784 CGTACGAACAATGATTAGTATGTAAGT 57.770 33.333 10.44 0.00 0.00 2.24
5288 7024 9.383519 ACAATGATTAGTATGTAAGTTGTCCAG 57.616 33.333 0.00 0.00 0.00 3.86
5291 7027 8.997621 TGATTAGTATGTAAGTTGTCCAGTTC 57.002 34.615 0.00 0.00 0.00 3.01
5295 7031 7.778185 AGTATGTAAGTTGTCCAGTTCTAGT 57.222 36.000 0.00 0.00 0.00 2.57
5296 7032 7.828712 AGTATGTAAGTTGTCCAGTTCTAGTC 58.171 38.462 0.00 0.00 0.00 2.59
5298 7034 6.665992 TGTAAGTTGTCCAGTTCTAGTCAT 57.334 37.500 0.00 0.00 0.00 3.06
5299 7035 7.770366 TGTAAGTTGTCCAGTTCTAGTCATA 57.230 36.000 0.00 0.00 0.00 2.15
5300 7036 8.185506 TGTAAGTTGTCCAGTTCTAGTCATAA 57.814 34.615 0.00 0.00 0.00 1.90
5301 7037 8.644216 TGTAAGTTGTCCAGTTCTAGTCATAAA 58.356 33.333 0.00 0.00 0.00 1.40
5302 7038 9.654663 GTAAGTTGTCCAGTTCTAGTCATAAAT 57.345 33.333 0.00 0.00 0.00 1.40
5303 7039 8.553459 AAGTTGTCCAGTTCTAGTCATAAATG 57.447 34.615 0.00 0.00 0.00 2.32
5304 7040 6.595716 AGTTGTCCAGTTCTAGTCATAAATGC 59.404 38.462 0.00 0.00 0.00 3.56
5305 7041 6.048732 TGTCCAGTTCTAGTCATAAATGCA 57.951 37.500 0.00 0.00 0.00 3.96
5306 7042 6.472016 TGTCCAGTTCTAGTCATAAATGCAA 58.528 36.000 0.00 0.00 0.00 4.08
5309 7045 7.764443 GTCCAGTTCTAGTCATAAATGCAAGTA 59.236 37.037 0.00 0.00 0.00 2.24
5311 7047 9.764363 CCAGTTCTAGTCATAAATGCAAGTATA 57.236 33.333 0.00 0.00 0.00 1.47
5316 7052 9.261180 TCTAGTCATAAATGCAAGTATACAAGC 57.739 33.333 5.50 8.97 0.00 4.01
5317 7053 7.864108 AGTCATAAATGCAAGTATACAAGCA 57.136 32.000 20.02 20.02 41.73 3.91
5328 7064 9.002600 TGCAAGTATACAAGCATAATAAGATGG 57.997 33.333 15.59 0.00 31.05 3.51
5329 7065 8.454106 GCAAGTATACAAGCATAATAAGATGGG 58.546 37.037 5.50 0.00 0.00 4.00
5331 7067 9.726438 AAGTATACAAGCATAATAAGATGGGAC 57.274 33.333 5.50 0.00 0.00 4.46
5332 7068 8.035394 AGTATACAAGCATAATAAGATGGGACG 58.965 37.037 5.50 0.00 0.00 4.79
5333 7069 5.036117 ACAAGCATAATAAGATGGGACGT 57.964 39.130 0.00 0.00 0.00 4.34
5334 7070 4.816385 ACAAGCATAATAAGATGGGACGTG 59.184 41.667 0.00 0.00 0.00 4.49
5335 7071 3.403038 AGCATAATAAGATGGGACGTGC 58.597 45.455 0.00 0.00 0.00 5.34
5336 7072 3.071602 AGCATAATAAGATGGGACGTGCT 59.928 43.478 7.11 0.00 35.75 4.40
5337 7073 4.283467 AGCATAATAAGATGGGACGTGCTA 59.717 41.667 7.11 0.00 38.49 3.49
5338 7074 4.389077 GCATAATAAGATGGGACGTGCTAC 59.611 45.833 7.11 0.00 0.00 3.58
5353 7089 2.806577 CTACGCATCGGAGCTCATG 58.193 57.895 17.19 12.64 28.53 3.07
5354 7090 0.031314 CTACGCATCGGAGCTCATGT 59.969 55.000 17.19 6.52 28.53 3.21
5357 7093 1.086067 CGCATCGGAGCTCATGTTGT 61.086 55.000 17.19 0.00 0.00 3.32
5358 7094 0.654683 GCATCGGAGCTCATGTTGTC 59.345 55.000 17.19 5.72 0.00 3.18
5359 7095 1.293924 CATCGGAGCTCATGTTGTCC 58.706 55.000 17.19 0.00 0.00 4.02
5360 7096 1.134580 CATCGGAGCTCATGTTGTCCT 60.135 52.381 17.19 0.00 0.00 3.85
5361 7097 0.532573 TCGGAGCTCATGTTGTCCTC 59.467 55.000 17.19 0.00 0.00 3.71
5362 7098 0.247460 CGGAGCTCATGTTGTCCTCA 59.753 55.000 17.19 0.00 0.00 3.86
5363 7099 1.731720 GGAGCTCATGTTGTCCTCAC 58.268 55.000 17.19 0.00 0.00 3.51
5366 7102 1.632409 AGCTCATGTTGTCCTCACCAT 59.368 47.619 0.00 0.00 0.00 3.55
5367 7103 2.040813 AGCTCATGTTGTCCTCACCATT 59.959 45.455 0.00 0.00 0.00 3.16
5368 7104 2.163010 GCTCATGTTGTCCTCACCATTG 59.837 50.000 0.00 0.00 0.00 2.82
5369 7105 3.415212 CTCATGTTGTCCTCACCATTGT 58.585 45.455 0.00 0.00 0.00 2.71
5371 7150 4.979335 TCATGTTGTCCTCACCATTGTAA 58.021 39.130 0.00 0.00 0.00 2.41
5375 7154 4.578516 TGTTGTCCTCACCATTGTAAACAG 59.421 41.667 0.00 0.00 0.00 3.16
5379 7158 4.213482 GTCCTCACCATTGTAAACAGTGTC 59.787 45.833 0.00 0.00 34.69 3.67
5383 7162 6.092670 CCTCACCATTGTAAACAGTGTCATAG 59.907 42.308 0.00 0.00 34.69 2.23
5390 7169 5.790593 TGTAAACAGTGTCATAGAACCCTC 58.209 41.667 0.00 0.00 0.00 4.30
5392 7171 6.722590 TGTAAACAGTGTCATAGAACCCTCTA 59.277 38.462 0.00 0.00 38.54 2.43
5398 7177 5.542635 AGTGTCATAGAACCCTCTACAACAA 59.457 40.000 0.00 0.00 36.98 2.83
5404 7183 3.391296 AGAACCCTCTACAACAAAGCTCA 59.609 43.478 0.00 0.00 0.00 4.26
5412 7191 6.347725 CCTCTACAACAAAGCTCATGTTACAC 60.348 42.308 15.19 0.00 38.90 2.90
5435 7214 5.984926 ACAAACATTTGCAATAGAGGTTGTG 59.015 36.000 17.76 12.19 41.79 3.33
5436 7215 5.789643 AACATTTGCAATAGAGGTTGTGT 57.210 34.783 0.00 0.00 0.00 3.72
5437 7216 5.789643 ACATTTGCAATAGAGGTTGTGTT 57.210 34.783 0.00 0.00 0.00 3.32
5438 7217 6.892658 ACATTTGCAATAGAGGTTGTGTTA 57.107 33.333 0.00 0.00 0.00 2.41
5439 7218 7.466746 ACATTTGCAATAGAGGTTGTGTTAT 57.533 32.000 0.00 0.00 0.00 1.89
5440 7219 8.574251 ACATTTGCAATAGAGGTTGTGTTATA 57.426 30.769 0.00 0.00 0.00 0.98
5441 7220 8.677300 ACATTTGCAATAGAGGTTGTGTTATAG 58.323 33.333 0.00 0.00 0.00 1.31
5479 7258 5.294306 TCACCTTTTCGCAACATAGATGATC 59.706 40.000 0.00 0.00 0.00 2.92
5483 7262 6.037500 CCTTTTCGCAACATAGATGATCTTGA 59.962 38.462 0.00 0.00 0.00 3.02
5547 7330 9.681692 TTTTAATGAAAGATGATGTCACAACAG 57.318 29.630 0.00 0.00 39.20 3.16
5554 7337 2.766313 TGATGTCACAACAGCACCTAC 58.234 47.619 0.00 0.00 46.31 3.18
5555 7338 1.726791 GATGTCACAACAGCACCTACG 59.273 52.381 0.00 0.00 41.49 3.51
5556 7339 0.462375 TGTCACAACAGCACCTACGT 59.538 50.000 0.00 0.00 0.00 3.57
5557 7340 1.137513 GTCACAACAGCACCTACGTC 58.862 55.000 0.00 0.00 0.00 4.34
5558 7341 0.318360 TCACAACAGCACCTACGTCG 60.318 55.000 0.00 0.00 0.00 5.12
5577 7360 0.593773 GTTGTTGTCGCCGTTTGCAT 60.594 50.000 0.00 0.00 41.33 3.96
5582 7365 2.813474 TCGCCGTTTGCATCTCCG 60.813 61.111 0.00 0.00 41.33 4.63
5592 7375 2.254546 TGCATCTCCGTCTTTGTTGT 57.745 45.000 0.00 0.00 0.00 3.32
5601 7384 5.013568 TCCGTCTTTGTTGTAGAAACTCA 57.986 39.130 0.00 0.00 0.00 3.41
5606 7389 6.399039 CGTCTTTGTTGTAGAAACTCATCTCG 60.399 42.308 0.00 0.00 0.00 4.04
5607 7390 6.641314 GTCTTTGTTGTAGAAACTCATCTCGA 59.359 38.462 0.00 0.00 0.00 4.04
5626 7409 2.444706 AGCAGATCCCTAGCCGCA 60.445 61.111 0.00 0.00 0.00 5.69
5629 7412 3.227276 AGATCCCTAGCCGCACCG 61.227 66.667 0.00 0.00 0.00 4.94
5648 7431 1.385528 GGTCGTCTCTCCTCTTCCTC 58.614 60.000 0.00 0.00 0.00 3.71
5652 7435 0.395173 GTCTCTCCTCTTCCTCCGCT 60.395 60.000 0.00 0.00 0.00 5.52
5653 7436 0.333312 TCTCTCCTCTTCCTCCGCTT 59.667 55.000 0.00 0.00 0.00 4.68
5681 7464 2.343101 TCCGAGATTACGTTTGGCTTG 58.657 47.619 0.00 0.00 0.00 4.01
5725 7508 1.470979 CCATCCTTGCAGCTTTGCATC 60.471 52.381 0.98 0.00 44.94 3.91
5726 7509 0.454600 ATCCTTGCAGCTTTGCATCG 59.545 50.000 0.98 0.00 44.94 3.84
5743 7526 2.110967 CGGTGCCCTGATCTTGCAG 61.111 63.158 4.90 0.00 35.33 4.41
5785 7568 1.878656 CGCAAAGGTCGTCTCCCTCT 61.879 60.000 0.00 0.00 0.00 3.69
5805 7588 3.881688 TCTACTCGCAACATAGAGGGTAC 59.118 47.826 0.00 0.00 38.72 3.34
5806 7589 2.736347 ACTCGCAACATAGAGGGTACT 58.264 47.619 0.00 0.00 38.72 2.73
5813 7596 4.038162 GCAACATAGAGGGTACTGGTCTAG 59.962 50.000 0.00 0.00 0.00 2.43
5818 7601 2.242708 AGAGGGTACTGGTCTAGTGGAG 59.757 54.545 0.00 0.00 40.65 3.86
5833 7616 0.119155 TGGAGGGGATCTGAGGTTGT 59.881 55.000 0.00 0.00 0.00 3.32
5856 7639 2.679092 CATGGCTGGAGCTTGGGA 59.321 61.111 0.00 0.00 41.70 4.37
5864 7647 2.266055 GAGCTTGGGACGTGGAGG 59.734 66.667 0.00 0.00 0.00 4.30
5865 7648 2.203788 AGCTTGGGACGTGGAGGA 60.204 61.111 0.00 0.00 0.00 3.71
5870 7653 0.037590 TTGGGACGTGGAGGATTTGG 59.962 55.000 0.00 0.00 0.00 3.28
5871 7654 1.077716 GGGACGTGGAGGATTTGGG 60.078 63.158 0.00 0.00 0.00 4.12
5874 7657 1.271707 GGACGTGGAGGATTTGGGAAA 60.272 52.381 0.00 0.00 0.00 3.13
5885 7668 3.382865 GGATTTGGGAAAGAGATTGGAGC 59.617 47.826 0.00 0.00 0.00 4.70
5892 7675 0.177604 AAGAGATTGGAGCGAGGCTG 59.822 55.000 0.00 0.00 39.88 4.85
5902 7685 3.121030 CGAGGCTGTTCTTGGGCG 61.121 66.667 0.00 0.00 0.00 6.13
5906 7689 2.281484 GCTGTTCTTGGGCGTCCA 60.281 61.111 3.51 3.51 42.25 4.02
5942 7728 2.026822 TGAGAACAAGGGAGAAGATGCC 60.027 50.000 0.00 0.00 40.48 4.40
5944 7730 2.579860 AGAACAAGGGAGAAGATGCCAT 59.420 45.455 0.00 0.00 43.31 4.40
5946 7732 4.228210 AGAACAAGGGAGAAGATGCCATAA 59.772 41.667 0.00 0.00 43.31 1.90
5982 7768 0.468029 AGGGAAAGGTGGTGTGCAAG 60.468 55.000 0.00 0.00 0.00 4.01
6012 7798 1.284982 ACGTGTTGCATGCTCGAGAC 61.285 55.000 18.75 12.07 0.00 3.36
6033 7819 2.947448 GCAAATGCCCGAGAGAAAAT 57.053 45.000 0.00 0.00 34.31 1.82
6035 7821 2.480244 GCAAATGCCCGAGAGAAAATCC 60.480 50.000 0.00 0.00 34.31 3.01
6037 7823 0.541863 ATGCCCGAGAGAAAATCCGT 59.458 50.000 0.00 0.00 0.00 4.69
6087 7874 9.812347 ATAAGAAAATATTCTACATCATGCCCA 57.188 29.630 0.00 0.00 45.19 5.36
6094 7881 4.233632 TCTACATCATGCCCATTGTCAA 57.766 40.909 0.00 0.00 0.00 3.18
6096 7883 5.202765 TCTACATCATGCCCATTGTCAATT 58.797 37.500 0.00 0.00 0.00 2.32
6099 7886 3.872511 TCATGCCCATTGTCAATTGAC 57.127 42.857 28.10 28.10 44.97 3.18
6131 7918 7.447374 TGAAACTATGTCATTACCAAACAGG 57.553 36.000 0.00 0.00 45.67 4.00
6146 7933 0.613260 ACAGGGAAAGCTATGCGTCA 59.387 50.000 0.00 0.00 0.00 4.35
6159 7946 4.436584 GCTATGCGTCAGCCAATGATAATC 60.437 45.833 0.00 0.00 44.33 1.75
6184 7971 3.460857 AAGATCAATCGTCCAGGTAGC 57.539 47.619 0.00 0.00 0.00 3.58
6188 7975 0.527817 CAATCGTCCAGGTAGCCGTC 60.528 60.000 0.00 0.00 0.00 4.79
6191 7978 2.772691 CGTCCAGGTAGCCGTCCTC 61.773 68.421 0.00 0.00 32.37 3.71
6205 7992 0.175760 GTCCTCGTTCTATGCAGCCA 59.824 55.000 0.00 0.00 0.00 4.75
6210 7997 0.458543 CGTTCTATGCAGCCACGTCT 60.459 55.000 0.00 0.00 0.00 4.18
6228 8015 2.103941 GTCTGATCCCTCCTTGTGATCC 59.896 54.545 0.00 0.00 35.18 3.36
6251 8038 2.305928 TGAGCTTTTGCAACAAGCCTA 58.694 42.857 27.67 19.75 46.76 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.137675 ACGGGTCTAATTCTTACCGCC 59.862 52.381 10.34 0.00 44.73 6.13
3 4 3.119388 TGTCACGGGTCTAATTCTTACCG 60.119 47.826 9.22 9.22 46.16 4.02
4 5 4.179298 GTGTCACGGGTCTAATTCTTACC 58.821 47.826 0.00 0.00 0.00 2.85
6 7 3.196254 GGGTGTCACGGGTCTAATTCTTA 59.804 47.826 0.00 0.00 0.00 2.10
7 8 2.027469 GGGTGTCACGGGTCTAATTCTT 60.027 50.000 0.00 0.00 0.00 2.52
8 9 1.553704 GGGTGTCACGGGTCTAATTCT 59.446 52.381 0.00 0.00 0.00 2.40
9 10 1.553704 AGGGTGTCACGGGTCTAATTC 59.446 52.381 0.00 0.00 0.00 2.17
10 11 1.553704 GAGGGTGTCACGGGTCTAATT 59.446 52.381 0.00 0.00 0.00 1.40
11 12 1.192428 GAGGGTGTCACGGGTCTAAT 58.808 55.000 0.00 0.00 0.00 1.73
12 13 1.246056 CGAGGGTGTCACGGGTCTAA 61.246 60.000 0.00 0.00 0.00 2.10
13 14 1.676635 CGAGGGTGTCACGGGTCTA 60.677 63.158 0.00 0.00 0.00 2.59
15 16 4.065281 CCGAGGGTGTCACGGGTC 62.065 72.222 0.00 0.00 42.48 4.46
42 43 4.795469 TCCTCTTTTTCTTTTAACGGGGT 58.205 39.130 0.00 0.00 0.00 4.95
43 44 5.777850 TTCCTCTTTTTCTTTTAACGGGG 57.222 39.130 0.00 0.00 0.00 5.73
89 90 7.416154 TCCGTTTCTCATGTGTTTTAGTTAG 57.584 36.000 0.00 0.00 0.00 2.34
90 91 7.711772 TCTTCCGTTTCTCATGTGTTTTAGTTA 59.288 33.333 0.00 0.00 0.00 2.24
91 92 6.540914 TCTTCCGTTTCTCATGTGTTTTAGTT 59.459 34.615 0.00 0.00 0.00 2.24
98 99 6.464222 TCTTATTCTTCCGTTTCTCATGTGT 58.536 36.000 0.00 0.00 0.00 3.72
99 100 6.968131 TCTTATTCTTCCGTTTCTCATGTG 57.032 37.500 0.00 0.00 0.00 3.21
111 112 6.981722 TGTGCCTTTTTCTTCTTATTCTTCC 58.018 36.000 0.00 0.00 0.00 3.46
112 113 8.871686 TTTGTGCCTTTTTCTTCTTATTCTTC 57.128 30.769 0.00 0.00 0.00 2.87
113 114 9.317936 CTTTTGTGCCTTTTTCTTCTTATTCTT 57.682 29.630 0.00 0.00 0.00 2.52
114 115 8.695456 TCTTTTGTGCCTTTTTCTTCTTATTCT 58.305 29.630 0.00 0.00 0.00 2.40
115 116 8.871686 TCTTTTGTGCCTTTTTCTTCTTATTC 57.128 30.769 0.00 0.00 0.00 1.75
118 119 7.836842 ACTTCTTTTGTGCCTTTTTCTTCTTA 58.163 30.769 0.00 0.00 0.00 2.10
134 135 6.094048 TCAGACCAGTTTCAGAACTTCTTTTG 59.906 38.462 0.00 0.00 43.48 2.44
138 139 5.119694 GTTCAGACCAGTTTCAGAACTTCT 58.880 41.667 0.00 0.00 43.48 2.85
156 157 6.380274 TGGTAAGGTTCTATAGACTGGTTCAG 59.620 42.308 0.67 0.00 37.52 3.02
164 165 7.392418 AGTGGTTTTGGTAAGGTTCTATAGAC 58.608 38.462 0.67 0.00 0.00 2.59
198 199 5.520376 AAATGTGCCAGCCTAACAATATC 57.480 39.130 0.00 0.00 0.00 1.63
202 203 3.761897 ACTAAATGTGCCAGCCTAACAA 58.238 40.909 0.00 0.00 0.00 2.83
207 208 2.840651 ACTCTACTAAATGTGCCAGCCT 59.159 45.455 0.00 0.00 0.00 4.58
215 216 5.003804 CACCTTTGGCACTCTACTAAATGT 58.996 41.667 0.00 0.00 0.00 2.71
216 217 5.245531 TCACCTTTGGCACTCTACTAAATG 58.754 41.667 0.00 0.00 0.00 2.32
217 218 5.499004 TCACCTTTGGCACTCTACTAAAT 57.501 39.130 0.00 0.00 0.00 1.40
228 229 1.531365 CCCAGCTTCACCTTTGGCA 60.531 57.895 0.00 0.00 0.00 4.92
233 234 0.995024 ATGTAGCCCAGCTTCACCTT 59.005 50.000 0.00 0.00 38.64 3.50
235 236 0.543749 AGATGTAGCCCAGCTTCACC 59.456 55.000 0.00 0.00 36.00 4.02
243 244 4.526650 TCGCTTATTATGAGATGTAGCCCA 59.473 41.667 0.00 0.00 0.00 5.36
248 249 9.326413 TCGATATCTCGCTTATTATGAGATGTA 57.674 33.333 12.81 0.00 46.16 2.29
249 250 8.214721 TCGATATCTCGCTTATTATGAGATGT 57.785 34.615 12.81 7.20 46.16 3.06
250 251 8.555361 TCTCGATATCTCGCTTATTATGAGATG 58.445 37.037 12.81 0.00 46.16 2.90
257 258 8.123575 GCACTATTCTCGATATCTCGCTTATTA 58.876 37.037 0.34 0.00 44.65 0.98
265 266 5.773575 TGTTGGCACTATTCTCGATATCTC 58.226 41.667 0.34 0.00 0.00 2.75
271 272 4.471904 AGATTGTTGGCACTATTCTCGA 57.528 40.909 0.00 0.00 0.00 4.04
380 389 1.453155 AAGGTCATCAACGATGGCAC 58.547 50.000 10.46 0.03 45.33 5.01
437 446 1.452145 AAAGTCGCGCCCACAAATGT 61.452 50.000 0.00 0.00 0.00 2.71
441 450 2.515057 ACAAAGTCGCGCCCACAA 60.515 55.556 0.00 0.00 0.00 3.33
454 463 3.946604 TGGCAATAGGCGAGACAAA 57.053 47.368 0.00 0.00 46.16 2.83
471 480 0.445436 GAGCCAAGATGTTGCGTCTG 59.555 55.000 0.00 0.00 29.33 3.51
491 503 1.304879 GCCCAATTACCAGGCACCA 60.305 57.895 0.00 0.00 46.34 4.17
701 775 3.682858 CCGTTAGGAAATCACGATGTTGT 59.317 43.478 0.00 0.00 41.02 3.32
708 782 1.426041 CGGCCCGTTAGGAAATCACG 61.426 60.000 0.00 0.00 41.02 4.35
726 800 5.317733 TCTTTTTAACATTATGTGGGCCG 57.682 39.130 0.00 0.00 0.00 6.13
728 802 5.231991 CGCATCTTTTTAACATTATGTGGGC 59.768 40.000 0.00 0.00 0.00 5.36
729 803 6.329496 ACGCATCTTTTTAACATTATGTGGG 58.671 36.000 0.00 0.00 0.00 4.61
730 804 7.965655 TGTACGCATCTTTTTAACATTATGTGG 59.034 33.333 0.00 0.00 0.00 4.17
743 817 2.073056 TCGCACATGTACGCATCTTTT 58.927 42.857 13.73 0.00 31.99 2.27
747 821 0.848942 CTCTCGCACATGTACGCATC 59.151 55.000 13.73 0.00 31.99 3.91
748 822 0.455815 TCTCTCGCACATGTACGCAT 59.544 50.000 13.73 0.00 35.32 4.73
749 823 0.456142 GTCTCTCGCACATGTACGCA 60.456 55.000 13.73 1.97 0.00 5.24
750 824 0.179161 AGTCTCTCGCACATGTACGC 60.179 55.000 13.73 5.84 0.00 4.42
751 825 2.264109 AAGTCTCTCGCACATGTACG 57.736 50.000 12.37 12.37 0.00 3.67
752 826 4.734917 AGTAAAGTCTCTCGCACATGTAC 58.265 43.478 0.00 0.00 0.00 2.90
753 827 5.448768 GCTAGTAAAGTCTCTCGCACATGTA 60.449 44.000 0.00 0.00 0.00 2.29
754 828 3.944055 AGTAAAGTCTCTCGCACATGT 57.056 42.857 0.00 0.00 0.00 3.21
755 829 3.794028 GCTAGTAAAGTCTCTCGCACATG 59.206 47.826 0.00 0.00 0.00 3.21
756 830 3.697045 AGCTAGTAAAGTCTCTCGCACAT 59.303 43.478 0.00 0.00 0.00 3.21
757 831 3.082548 AGCTAGTAAAGTCTCTCGCACA 58.917 45.455 0.00 0.00 0.00 4.57
758 832 3.430931 CAGCTAGTAAAGTCTCTCGCAC 58.569 50.000 0.00 0.00 0.00 5.34
759 833 2.159366 GCAGCTAGTAAAGTCTCTCGCA 60.159 50.000 0.00 0.00 0.00 5.10
761 835 2.352034 TCGCAGCTAGTAAAGTCTCTCG 59.648 50.000 0.00 0.00 0.00 4.04
763 837 4.993029 AATCGCAGCTAGTAAAGTCTCT 57.007 40.909 0.00 0.00 0.00 3.10
764 838 7.701809 ATAAAATCGCAGCTAGTAAAGTCTC 57.298 36.000 0.00 0.00 0.00 3.36
765 839 8.494016 AAATAAAATCGCAGCTAGTAAAGTCT 57.506 30.769 0.00 0.00 0.00 3.24
766 840 9.556030 AAAAATAAAATCGCAGCTAGTAAAGTC 57.444 29.630 0.00 0.00 0.00 3.01
767 841 9.341899 CAAAAATAAAATCGCAGCTAGTAAAGT 57.658 29.630 0.00 0.00 0.00 2.66
768 842 9.554724 TCAAAAATAAAATCGCAGCTAGTAAAG 57.445 29.630 0.00 0.00 0.00 1.85
769 843 9.900710 TTCAAAAATAAAATCGCAGCTAGTAAA 57.099 25.926 0.00 0.00 0.00 2.01
770 844 9.554724 CTTCAAAAATAAAATCGCAGCTAGTAA 57.445 29.630 0.00 0.00 0.00 2.24
771 845 8.181573 CCTTCAAAAATAAAATCGCAGCTAGTA 58.818 33.333 0.00 0.00 0.00 1.82
772 846 7.029563 CCTTCAAAAATAAAATCGCAGCTAGT 58.970 34.615 0.00 0.00 0.00 2.57
773 847 7.218963 GTCCTTCAAAAATAAAATCGCAGCTAG 59.781 37.037 0.00 0.00 0.00 3.42
774 848 7.027161 GTCCTTCAAAAATAAAATCGCAGCTA 58.973 34.615 0.00 0.00 0.00 3.32
775 849 5.863935 GTCCTTCAAAAATAAAATCGCAGCT 59.136 36.000 0.00 0.00 0.00 4.24
776 850 5.220024 CGTCCTTCAAAAATAAAATCGCAGC 60.220 40.000 0.00 0.00 0.00 5.25
777 851 5.856455 ACGTCCTTCAAAAATAAAATCGCAG 59.144 36.000 0.00 0.00 0.00 5.18
778 852 5.764131 ACGTCCTTCAAAAATAAAATCGCA 58.236 33.333 0.00 0.00 0.00 5.10
779 853 7.019418 ACTACGTCCTTCAAAAATAAAATCGC 58.981 34.615 0.00 0.00 0.00 4.58
785 859 9.715121 AGTTCATACTACGTCCTTCAAAAATAA 57.285 29.630 0.00 0.00 31.21 1.40
786 860 9.715121 AAGTTCATACTACGTCCTTCAAAAATA 57.285 29.630 0.00 0.00 33.17 1.40
787 861 8.617290 AAGTTCATACTACGTCCTTCAAAAAT 57.383 30.769 0.00 0.00 33.17 1.82
788 862 8.339714 CAAAGTTCATACTACGTCCTTCAAAAA 58.660 33.333 0.00 0.00 33.17 1.94
789 863 7.711772 TCAAAGTTCATACTACGTCCTTCAAAA 59.288 33.333 0.00 0.00 33.17 2.44
790 864 7.211573 TCAAAGTTCATACTACGTCCTTCAAA 58.788 34.615 0.00 0.00 33.17 2.69
791 865 6.751157 TCAAAGTTCATACTACGTCCTTCAA 58.249 36.000 0.00 0.00 33.17 2.69
792 866 6.335471 TCAAAGTTCATACTACGTCCTTCA 57.665 37.500 0.00 0.00 33.17 3.02
793 867 7.760340 AGAATCAAAGTTCATACTACGTCCTTC 59.240 37.037 0.00 0.00 33.17 3.46
794 868 7.612677 AGAATCAAAGTTCATACTACGTCCTT 58.387 34.615 0.00 0.00 33.17 3.36
795 869 7.093902 TGAGAATCAAAGTTCATACTACGTCCT 60.094 37.037 0.00 0.00 45.97 3.85
796 870 7.033791 TGAGAATCAAAGTTCATACTACGTCC 58.966 38.462 0.00 0.00 45.97 4.79
825 899 9.832445 TCTGAAGAAGAAGAAAACTTAGCTAAA 57.168 29.630 7.74 0.00 29.54 1.85
827 901 9.429359 CATCTGAAGAAGAAGAAAACTTAGCTA 57.571 33.333 0.00 0.00 38.79 3.32
828 902 7.936301 ACATCTGAAGAAGAAGAAAACTTAGCT 59.064 33.333 0.00 0.00 38.79 3.32
829 903 8.014517 CACATCTGAAGAAGAAGAAAACTTAGC 58.985 37.037 0.00 0.00 38.79 3.09
830 904 8.502387 CCACATCTGAAGAAGAAGAAAACTTAG 58.498 37.037 0.00 0.00 38.79 2.18
831 905 7.445402 CCCACATCTGAAGAAGAAGAAAACTTA 59.555 37.037 0.00 0.00 38.79 2.24
832 906 6.264067 CCCACATCTGAAGAAGAAGAAAACTT 59.736 38.462 0.00 0.00 38.79 2.66
833 907 5.767168 CCCACATCTGAAGAAGAAGAAAACT 59.233 40.000 0.00 0.00 38.79 2.66
834 908 5.532779 ACCCACATCTGAAGAAGAAGAAAAC 59.467 40.000 0.00 0.00 38.79 2.43
835 909 5.694995 ACCCACATCTGAAGAAGAAGAAAA 58.305 37.500 0.00 0.00 38.79 2.29
836 910 5.308825 GACCCACATCTGAAGAAGAAGAAA 58.691 41.667 0.00 0.00 38.79 2.52
837 911 4.561530 CGACCCACATCTGAAGAAGAAGAA 60.562 45.833 0.00 0.00 38.79 2.52
838 912 3.056536 CGACCCACATCTGAAGAAGAAGA 60.057 47.826 0.00 0.00 38.79 2.87
839 913 3.257393 CGACCCACATCTGAAGAAGAAG 58.743 50.000 0.00 0.00 38.79 2.85
840 914 2.028112 CCGACCCACATCTGAAGAAGAA 60.028 50.000 0.00 0.00 38.79 2.52
841 915 1.550524 CCGACCCACATCTGAAGAAGA 59.449 52.381 0.00 0.00 39.94 2.87
842 916 1.276421 ACCGACCCACATCTGAAGAAG 59.724 52.381 0.00 0.00 0.00 2.85
843 917 1.348064 ACCGACCCACATCTGAAGAA 58.652 50.000 0.00 0.00 0.00 2.52
844 918 1.822990 GTACCGACCCACATCTGAAGA 59.177 52.381 0.00 0.00 0.00 2.87
845 919 1.825474 AGTACCGACCCACATCTGAAG 59.175 52.381 0.00 0.00 0.00 3.02
846 920 1.933021 AGTACCGACCCACATCTGAA 58.067 50.000 0.00 0.00 0.00 3.02
847 921 1.548719 CAAGTACCGACCCACATCTGA 59.451 52.381 0.00 0.00 0.00 3.27
848 922 1.275291 ACAAGTACCGACCCACATCTG 59.725 52.381 0.00 0.00 0.00 2.90
849 923 1.275291 CACAAGTACCGACCCACATCT 59.725 52.381 0.00 0.00 0.00 2.90
850 924 1.674817 CCACAAGTACCGACCCACATC 60.675 57.143 0.00 0.00 0.00 3.06
851 925 0.323629 CCACAAGTACCGACCCACAT 59.676 55.000 0.00 0.00 0.00 3.21
852 926 0.759812 TCCACAAGTACCGACCCACA 60.760 55.000 0.00 0.00 0.00 4.17
853 927 0.611714 ATCCACAAGTACCGACCCAC 59.388 55.000 0.00 0.00 0.00 4.61
854 928 0.611200 CATCCACAAGTACCGACCCA 59.389 55.000 0.00 0.00 0.00 4.51
855 929 0.107848 CCATCCACAAGTACCGACCC 60.108 60.000 0.00 0.00 0.00 4.46
856 930 0.899720 TCCATCCACAAGTACCGACC 59.100 55.000 0.00 0.00 0.00 4.79
857 931 2.754946 TTCCATCCACAAGTACCGAC 57.245 50.000 0.00 0.00 0.00 4.79
858 932 3.104512 AGATTCCATCCACAAGTACCGA 58.895 45.455 0.00 0.00 0.00 4.69
859 933 3.118775 TGAGATTCCATCCACAAGTACCG 60.119 47.826 0.00 0.00 0.00 4.02
860 934 4.192317 GTGAGATTCCATCCACAAGTACC 58.808 47.826 0.00 0.00 33.49 3.34
861 935 4.192317 GGTGAGATTCCATCCACAAGTAC 58.808 47.826 0.00 0.00 34.33 2.73
862 936 3.843619 TGGTGAGATTCCATCCACAAGTA 59.156 43.478 0.00 0.00 34.33 2.24
863 937 2.644299 TGGTGAGATTCCATCCACAAGT 59.356 45.455 0.00 0.00 34.33 3.16
864 938 3.012518 GTGGTGAGATTCCATCCACAAG 58.987 50.000 13.32 0.00 45.22 3.16
865 939 2.290896 GGTGGTGAGATTCCATCCACAA 60.291 50.000 17.38 0.00 46.96 3.33
866 940 1.281867 GGTGGTGAGATTCCATCCACA 59.718 52.381 17.38 0.00 46.96 4.17
867 941 1.281867 TGGTGGTGAGATTCCATCCAC 59.718 52.381 11.06 11.06 45.17 4.02
868 942 1.281867 GTGGTGGTGAGATTCCATCCA 59.718 52.381 0.00 0.00 35.40 3.41
869 943 1.408822 GGTGGTGGTGAGATTCCATCC 60.409 57.143 0.00 0.00 35.40 3.51
870 944 1.408822 GGGTGGTGGTGAGATTCCATC 60.409 57.143 0.00 0.00 37.30 3.51
871 945 0.625849 GGGTGGTGGTGAGATTCCAT 59.374 55.000 0.00 0.00 37.30 3.41
872 946 1.836999 CGGGTGGTGGTGAGATTCCA 61.837 60.000 0.00 0.00 0.00 3.53
873 947 1.078426 CGGGTGGTGGTGAGATTCC 60.078 63.158 0.00 0.00 0.00 3.01
874 948 0.036306 AACGGGTGGTGGTGAGATTC 59.964 55.000 0.00 0.00 0.00 2.52
875 949 0.476771 AAACGGGTGGTGGTGAGATT 59.523 50.000 0.00 0.00 0.00 2.40
876 950 0.250727 CAAACGGGTGGTGGTGAGAT 60.251 55.000 0.00 0.00 0.00 2.75
877 951 1.147376 CAAACGGGTGGTGGTGAGA 59.853 57.895 0.00 0.00 0.00 3.27
878 952 0.107081 TACAAACGGGTGGTGGTGAG 59.893 55.000 0.00 0.00 0.00 3.51
879 953 0.545171 TTACAAACGGGTGGTGGTGA 59.455 50.000 0.00 0.00 0.00 4.02
880 954 1.611519 ATTACAAACGGGTGGTGGTG 58.388 50.000 0.00 0.00 0.00 4.17
881 955 2.232399 GAATTACAAACGGGTGGTGGT 58.768 47.619 0.00 0.00 0.00 4.16
882 956 1.542472 GGAATTACAAACGGGTGGTGG 59.458 52.381 0.00 0.00 0.00 4.61
883 957 2.227865 CAGGAATTACAAACGGGTGGTG 59.772 50.000 0.00 0.00 0.00 4.17
884 958 2.158579 ACAGGAATTACAAACGGGTGGT 60.159 45.455 0.00 0.00 0.00 4.16
885 959 2.510613 ACAGGAATTACAAACGGGTGG 58.489 47.619 0.00 0.00 0.00 4.61
886 960 5.692613 TTTACAGGAATTACAAACGGGTG 57.307 39.130 0.00 0.00 0.00 4.61
887 961 5.122711 CGATTTACAGGAATTACAAACGGGT 59.877 40.000 0.00 0.00 0.00 5.28
888 962 5.122711 ACGATTTACAGGAATTACAAACGGG 59.877 40.000 0.00 0.00 0.00 5.28
889 963 6.173191 ACGATTTACAGGAATTACAAACGG 57.827 37.500 0.00 0.00 0.00 4.44
890 964 7.956558 AGTACGATTTACAGGAATTACAAACG 58.043 34.615 0.00 0.00 0.00 3.60
891 965 8.385858 GGAGTACGATTTACAGGAATTACAAAC 58.614 37.037 0.00 0.00 0.00 2.93
892 966 8.095792 TGGAGTACGATTTACAGGAATTACAAA 58.904 33.333 0.00 0.00 0.00 2.83
893 967 7.613585 TGGAGTACGATTTACAGGAATTACAA 58.386 34.615 0.00 0.00 0.00 2.41
894 968 7.172868 TGGAGTACGATTTACAGGAATTACA 57.827 36.000 0.00 0.00 0.00 2.41
895 969 8.385858 GTTTGGAGTACGATTTACAGGAATTAC 58.614 37.037 0.00 0.00 0.00 1.89
896 970 8.095792 TGTTTGGAGTACGATTTACAGGAATTA 58.904 33.333 0.00 0.00 0.00 1.40
897 971 6.938030 TGTTTGGAGTACGATTTACAGGAATT 59.062 34.615 0.00 0.00 0.00 2.17
898 972 6.469410 TGTTTGGAGTACGATTTACAGGAAT 58.531 36.000 0.00 0.00 0.00 3.01
899 973 5.856156 TGTTTGGAGTACGATTTACAGGAA 58.144 37.500 0.00 0.00 0.00 3.36
900 974 5.471556 TGTTTGGAGTACGATTTACAGGA 57.528 39.130 0.00 0.00 0.00 3.86
901 975 6.370442 TCAATGTTTGGAGTACGATTTACAGG 59.630 38.462 0.00 0.00 0.00 4.00
902 976 7.359262 TCAATGTTTGGAGTACGATTTACAG 57.641 36.000 0.00 0.00 0.00 2.74
903 977 7.731882 TTCAATGTTTGGAGTACGATTTACA 57.268 32.000 0.00 0.00 0.00 2.41
906 980 9.840427 CTTTATTCAATGTTTGGAGTACGATTT 57.160 29.630 0.00 0.00 0.00 2.17
907 981 9.010029 ACTTTATTCAATGTTTGGAGTACGATT 57.990 29.630 0.00 0.00 0.00 3.34
908 982 8.450964 CACTTTATTCAATGTTTGGAGTACGAT 58.549 33.333 0.00 0.00 0.00 3.73
909 983 7.442969 ACACTTTATTCAATGTTTGGAGTACGA 59.557 33.333 0.00 0.00 0.00 3.43
910 984 7.533900 CACACTTTATTCAATGTTTGGAGTACG 59.466 37.037 0.00 0.00 0.00 3.67
911 985 7.807907 CCACACTTTATTCAATGTTTGGAGTAC 59.192 37.037 3.68 0.00 39.95 2.73
912 986 7.504238 ACCACACTTTATTCAATGTTTGGAGTA 59.496 33.333 12.74 0.00 39.95 2.59
913 987 6.323739 ACCACACTTTATTCAATGTTTGGAGT 59.676 34.615 12.74 0.00 39.95 3.85
914 988 6.748132 ACCACACTTTATTCAATGTTTGGAG 58.252 36.000 12.74 0.00 39.95 3.86
915 989 6.723298 ACCACACTTTATTCAATGTTTGGA 57.277 33.333 12.74 0.00 39.95 3.53
916 990 7.784633 AAACCACACTTTATTCAATGTTTGG 57.215 32.000 6.91 6.91 41.78 3.28
917 991 8.760569 GGTAAACCACACTTTATTCAATGTTTG 58.239 33.333 0.00 0.00 35.64 2.93
918 992 7.929245 GGGTAAACCACACTTTATTCAATGTTT 59.071 33.333 0.81 0.00 39.85 2.83
919 993 7.438564 GGGTAAACCACACTTTATTCAATGTT 58.561 34.615 0.81 0.00 39.85 2.71
920 994 6.014925 GGGGTAAACCACACTTTATTCAATGT 60.015 38.462 0.81 0.00 42.91 2.71
921 995 6.210584 AGGGGTAAACCACACTTTATTCAATG 59.789 38.462 3.82 0.00 43.57 2.82
922 996 6.319715 AGGGGTAAACCACACTTTATTCAAT 58.680 36.000 3.82 0.00 43.57 2.57
923 997 5.707495 AGGGGTAAACCACACTTTATTCAA 58.293 37.500 3.82 0.00 43.57 2.69
924 998 5.327737 AGGGGTAAACCACACTTTATTCA 57.672 39.130 3.82 0.00 43.57 2.57
925 999 7.764141 TTTAGGGGTAAACCACACTTTATTC 57.236 36.000 3.82 0.00 43.57 1.75
926 1000 8.550280 TTTTTAGGGGTAAACCACACTTTATT 57.450 30.769 3.82 0.00 43.57 1.40
961 1035 8.792830 TGAGAATGGACTTCTTTTATTGGTAG 57.207 34.615 0.00 0.00 44.42 3.18
988 1062 6.200854 CAGCTTCGCTTTTTGGACTTATTTTT 59.799 34.615 0.00 0.00 36.40 1.94
989 1063 5.691754 CAGCTTCGCTTTTTGGACTTATTTT 59.308 36.000 0.00 0.00 36.40 1.82
990 1064 5.009610 TCAGCTTCGCTTTTTGGACTTATTT 59.990 36.000 0.00 0.00 36.40 1.40
991 1065 4.518970 TCAGCTTCGCTTTTTGGACTTATT 59.481 37.500 0.00 0.00 36.40 1.40
992 1066 4.072131 TCAGCTTCGCTTTTTGGACTTAT 58.928 39.130 0.00 0.00 36.40 1.73
993 1067 3.472652 TCAGCTTCGCTTTTTGGACTTA 58.527 40.909 0.00 0.00 36.40 2.24
994 1068 2.291741 CTCAGCTTCGCTTTTTGGACTT 59.708 45.455 0.00 0.00 36.40 3.01
995 1069 1.876156 CTCAGCTTCGCTTTTTGGACT 59.124 47.619 0.00 0.00 36.40 3.85
996 1070 1.664302 GCTCAGCTTCGCTTTTTGGAC 60.664 52.381 0.00 0.00 36.40 4.02
997 1071 0.593128 GCTCAGCTTCGCTTTTTGGA 59.407 50.000 0.00 0.00 36.40 3.53
998 1072 0.311790 TGCTCAGCTTCGCTTTTTGG 59.688 50.000 0.00 0.00 36.40 3.28
999 1073 2.124011 TTGCTCAGCTTCGCTTTTTG 57.876 45.000 0.00 0.00 36.40 2.44
1000 1074 2.035066 ACATTGCTCAGCTTCGCTTTTT 59.965 40.909 0.00 0.00 36.40 1.94
1006 1080 2.350522 AGGTAACATTGCTCAGCTTCG 58.649 47.619 0.00 0.00 41.41 3.79
1010 1084 5.818136 TTGAATAGGTAACATTGCTCAGC 57.182 39.130 0.00 0.00 41.41 4.26
1016 1090 7.383843 GGGTTTGTGTTTGAATAGGTAACATTG 59.616 37.037 0.00 0.00 41.41 2.82
1322 1396 2.351336 GAAGCTGCTGCCATGGATGC 62.351 60.000 18.40 18.59 40.80 3.91
1368 1442 3.554692 GATCGTGGCTTGGTCGCG 61.555 66.667 0.00 0.00 42.73 5.87
1392 1474 2.978946 GCCCCGGGTGAGAATTCCA 61.979 63.158 21.85 0.00 0.00 3.53
1410 1492 3.715495 CGTGAGGATGATGAGGAAGAAG 58.285 50.000 0.00 0.00 0.00 2.85
1411 1493 2.159043 GCGTGAGGATGATGAGGAAGAA 60.159 50.000 0.00 0.00 0.00 2.52
1451 1533 3.179265 GCCATCACACGACGACGG 61.179 66.667 12.58 3.35 44.46 4.79
1452 1534 3.532792 CGCCATCACACGACGACG 61.533 66.667 5.58 5.58 45.75 5.12
1672 1754 2.373169 AGGACAAGTGAGATCCTGCAAA 59.627 45.455 0.00 0.00 41.47 3.68
1713 1797 4.298332 CAAACCCTTAACAATCACAGCAC 58.702 43.478 0.00 0.00 0.00 4.40
1731 1829 1.032114 CAGAGAATCCCCGCCCAAAC 61.032 60.000 0.00 0.00 33.66 2.93
1743 1841 5.073428 GGGTTTTCAGAAGAACCAGAGAAT 58.927 41.667 20.11 0.00 45.62 2.40
1747 1845 2.486548 CCGGGTTTTCAGAAGAACCAGA 60.487 50.000 20.11 0.00 45.62 3.86
1748 1846 1.880027 CCGGGTTTTCAGAAGAACCAG 59.120 52.381 20.11 17.38 45.62 4.00
1765 1866 0.746563 TTAATCGCAAGCCTTCCCGG 60.747 55.000 0.00 0.00 37.18 5.73
1766 1867 1.308998 ATTAATCGCAAGCCTTCCCG 58.691 50.000 0.00 0.00 37.18 5.14
1773 1874 6.054035 AGCTAGAGAAAATTAATCGCAAGC 57.946 37.500 0.00 0.00 37.18 4.01
1774 1875 7.688372 TCAAGCTAGAGAAAATTAATCGCAAG 58.312 34.615 0.00 0.00 0.00 4.01
1778 1879 8.873830 TCTGTTCAAGCTAGAGAAAATTAATCG 58.126 33.333 0.00 0.00 0.00 3.34
1788 1889 6.713276 AGTAGTAGTCTGTTCAAGCTAGAGA 58.287 40.000 0.00 0.00 0.00 3.10
1789 1890 6.995511 AGTAGTAGTCTGTTCAAGCTAGAG 57.004 41.667 0.00 0.00 0.00 2.43
1790 1891 9.463902 AAATAGTAGTAGTCTGTTCAAGCTAGA 57.536 33.333 0.00 0.00 0.00 2.43
1813 1914 9.927668 CTCATCCCCGCAAATAAATAAATAAAT 57.072 29.630 0.00 0.00 0.00 1.40
1814 1915 7.870445 GCTCATCCCCGCAAATAAATAAATAAA 59.130 33.333 0.00 0.00 0.00 1.40
1815 1916 7.014711 TGCTCATCCCCGCAAATAAATAAATAA 59.985 33.333 0.00 0.00 32.40 1.40
1816 1917 6.491745 TGCTCATCCCCGCAAATAAATAAATA 59.508 34.615 0.00 0.00 32.40 1.40
1817 1918 5.304101 TGCTCATCCCCGCAAATAAATAAAT 59.696 36.000 0.00 0.00 32.40 1.40
1818 1919 4.646945 TGCTCATCCCCGCAAATAAATAAA 59.353 37.500 0.00 0.00 32.40 1.40
1819 1920 4.211125 TGCTCATCCCCGCAAATAAATAA 58.789 39.130 0.00 0.00 32.40 1.40
1820 1921 3.820467 CTGCTCATCCCCGCAAATAAATA 59.180 43.478 0.00 0.00 35.46 1.40
1821 1922 2.624838 CTGCTCATCCCCGCAAATAAAT 59.375 45.455 0.00 0.00 35.46 1.40
1822 1923 2.023673 CTGCTCATCCCCGCAAATAAA 58.976 47.619 0.00 0.00 35.46 1.40
1823 1924 1.211703 TCTGCTCATCCCCGCAAATAA 59.788 47.619 0.00 0.00 35.46 1.40
1824 1925 0.836606 TCTGCTCATCCCCGCAAATA 59.163 50.000 0.00 0.00 35.46 1.40
1825 1926 0.749454 GTCTGCTCATCCCCGCAAAT 60.749 55.000 0.00 0.00 35.46 2.32
1826 1927 1.377202 GTCTGCTCATCCCCGCAAA 60.377 57.895 0.00 0.00 35.46 3.68
1827 1928 2.268920 GTCTGCTCATCCCCGCAA 59.731 61.111 0.00 0.00 35.46 4.85
1828 1929 2.685017 AGTCTGCTCATCCCCGCA 60.685 61.111 0.00 0.00 34.54 5.69
1829 1930 2.037620 ATCAGTCTGCTCATCCCCGC 62.038 60.000 0.00 0.00 0.00 6.13
1830 1931 1.000283 GTATCAGTCTGCTCATCCCCG 60.000 57.143 0.00 0.00 0.00 5.73
1831 1932 2.324541 AGTATCAGTCTGCTCATCCCC 58.675 52.381 0.00 0.00 0.00 4.81
1832 1933 5.293560 GTTAAGTATCAGTCTGCTCATCCC 58.706 45.833 0.00 0.00 0.00 3.85
1833 1934 5.069781 AGGTTAAGTATCAGTCTGCTCATCC 59.930 44.000 0.00 0.00 0.00 3.51
1834 1935 6.155475 AGGTTAAGTATCAGTCTGCTCATC 57.845 41.667 0.00 0.00 0.00 2.92
1835 1936 6.155221 TCAAGGTTAAGTATCAGTCTGCTCAT 59.845 38.462 0.00 0.00 0.00 2.90
1839 1940 6.341316 TCATCAAGGTTAAGTATCAGTCTGC 58.659 40.000 0.00 0.00 0.00 4.26
1852 1953 3.072330 TCAGTGGCTGTTCATCAAGGTTA 59.928 43.478 0.00 0.00 32.61 2.85
1865 1966 5.751680 CGGTAAATTTGATATCAGTGGCTG 58.248 41.667 5.39 0.00 0.00 4.85
1866 1967 4.275936 GCGGTAAATTTGATATCAGTGGCT 59.724 41.667 5.39 0.00 0.00 4.75
1868 1969 5.296780 ACTGCGGTAAATTTGATATCAGTGG 59.703 40.000 5.39 0.00 31.90 4.00
1870 1971 6.202954 GCTACTGCGGTAAATTTGATATCAGT 59.797 38.462 6.88 9.78 36.41 3.41
1872 1973 6.288294 AGCTACTGCGGTAAATTTGATATCA 58.712 36.000 6.88 0.00 45.42 2.15
1873 1974 6.787085 AGCTACTGCGGTAAATTTGATATC 57.213 37.500 6.88 0.00 45.42 1.63
1874 1975 7.442656 AGTAGCTACTGCGGTAAATTTGATAT 58.557 34.615 25.52 0.00 45.42 1.63
1876 1977 5.671493 AGTAGCTACTGCGGTAAATTTGAT 58.329 37.500 25.52 0.00 45.42 2.57
1877 1978 5.080969 AGTAGCTACTGCGGTAAATTTGA 57.919 39.130 25.52 0.00 45.42 2.69
1878 1979 6.897259 TTAGTAGCTACTGCGGTAAATTTG 57.103 37.500 32.21 0.00 45.42 2.32
1891 1995 7.211966 TCCGATCTGGTAAATTAGTAGCTAC 57.788 40.000 16.43 16.43 39.52 3.58
1916 2020 7.234384 CGTGAATCGTAGCTGTATTTCTTTTT 58.766 34.615 0.00 0.00 34.52 1.94
1922 2026 4.119442 ACCGTGAATCGTAGCTGTATTT 57.881 40.909 0.00 0.00 37.94 1.40
1923 2027 3.795623 ACCGTGAATCGTAGCTGTATT 57.204 42.857 0.00 0.00 37.94 1.89
1924 2028 3.444916 CAACCGTGAATCGTAGCTGTAT 58.555 45.455 0.00 0.00 37.94 2.29
1925 2029 2.871133 CAACCGTGAATCGTAGCTGTA 58.129 47.619 0.00 0.00 37.94 2.74
1926 2030 1.710013 CAACCGTGAATCGTAGCTGT 58.290 50.000 0.00 0.00 37.94 4.40
1927 2031 0.370273 GCAACCGTGAATCGTAGCTG 59.630 55.000 0.00 0.00 37.94 4.24
1928 2032 0.037697 TGCAACCGTGAATCGTAGCT 60.038 50.000 0.00 0.00 37.94 3.32
1929 2033 0.370273 CTGCAACCGTGAATCGTAGC 59.630 55.000 0.00 0.00 37.94 3.58
1930 2034 1.390123 CACTGCAACCGTGAATCGTAG 59.610 52.381 0.00 0.00 37.94 3.51
1931 2035 1.424403 CACTGCAACCGTGAATCGTA 58.576 50.000 0.00 0.00 37.94 3.43
1932 2036 1.227999 CCACTGCAACCGTGAATCGT 61.228 55.000 6.16 0.00 37.94 3.73
1948 2052 5.061179 TCTTTTTAACTGCTACTCCACCAC 58.939 41.667 0.00 0.00 0.00 4.16
1969 2073 1.615392 GGCTCCAGTGCAACAATTTCT 59.385 47.619 0.00 0.00 41.43 2.52
1972 2076 1.708341 AAGGCTCCAGTGCAACAATT 58.292 45.000 0.00 0.00 41.43 2.32
1992 2096 3.779444 TCAGGGTCTAGAGAGCAGAAAA 58.221 45.455 10.67 0.00 43.82 2.29
1999 2103 2.079170 TGGCATCAGGGTCTAGAGAG 57.921 55.000 0.00 0.00 0.00 3.20
2004 2108 1.281867 CCAGTTTGGCATCAGGGTCTA 59.718 52.381 0.00 0.00 0.00 2.59
2008 2112 0.038744 ACTCCAGTTTGGCATCAGGG 59.961 55.000 0.00 0.00 37.47 4.45
2049 2153 4.755123 AGTCGCAAAATAAACTAGTGCAGT 59.245 37.500 0.00 0.00 40.05 4.40
2051 2155 4.752604 TGAGTCGCAAAATAAACTAGTGCA 59.247 37.500 0.00 0.00 34.87 4.57
2053 2157 5.734498 GCATGAGTCGCAAAATAAACTAGTG 59.266 40.000 0.00 0.00 0.00 2.74
2057 2161 4.726416 CAGCATGAGTCGCAAAATAAACT 58.274 39.130 0.00 0.00 39.69 2.66
2061 2171 2.358957 AGCAGCATGAGTCGCAAAATA 58.641 42.857 0.00 0.00 39.69 1.40
2067 2177 2.352651 TGAAATAAGCAGCATGAGTCGC 59.647 45.455 0.00 0.00 39.69 5.19
2074 2184 5.395682 TCAAAGCTTGAAATAAGCAGCAT 57.604 34.783 13.39 0.00 45.30 3.79
2122 2232 4.201950 CGAAGGGGAAAATGTAAGCATCAG 60.202 45.833 0.00 0.00 33.50 2.90
2331 2458 7.430211 TCGTAACGTATGTAAATCTGCACTTAG 59.570 37.037 0.00 0.00 0.00 2.18
2393 2521 5.012148 TGTTTTGAGTTTTCACCAAGGGAAA 59.988 36.000 0.00 0.00 31.71 3.13
2441 2575 3.581332 TGGTCTATTTTGAGGGTCTTCGT 59.419 43.478 0.00 0.00 0.00 3.85
2450 2584 8.961294 AGAGAATTCATCTGGTCTATTTTGAG 57.039 34.615 8.44 0.00 38.96 3.02
2488 2622 2.039084 ACAAGGGAGGCAAGTACTCAAG 59.961 50.000 0.00 0.00 36.70 3.02
2505 2639 5.215160 GGAAGTAAGCATGTCAACAACAAG 58.785 41.667 0.00 0.00 42.37 3.16
2509 2643 5.843673 TTTGGAAGTAAGCATGTCAACAA 57.156 34.783 0.00 0.00 0.00 2.83
2695 2829 1.676746 CCATCAAGCCAGAGATGTGG 58.323 55.000 0.00 0.00 39.92 4.17
2951 3091 7.989170 AGACTGCATATGAAATGTAACAGATCA 59.011 33.333 6.97 0.00 29.37 2.92
2952 3092 8.375608 AGACTGCATATGAAATGTAACAGATC 57.624 34.615 6.97 2.99 29.37 2.75
2958 3098 8.023021 ACCTAGAGACTGCATATGAAATGTAA 57.977 34.615 6.97 0.00 0.00 2.41
2966 3106 6.286758 ACAAATGACCTAGAGACTGCATATG 58.713 40.000 0.00 0.00 0.00 1.78
2967 3107 6.491714 ACAAATGACCTAGAGACTGCATAT 57.508 37.500 0.00 0.00 0.00 1.78
3012 3152 1.933853 CGTGGAATTAGCTAGCACCAC 59.066 52.381 24.29 24.29 42.64 4.16
3013 3153 1.553248 ACGTGGAATTAGCTAGCACCA 59.447 47.619 18.83 14.31 0.00 4.17
3014 3154 2.311124 ACGTGGAATTAGCTAGCACC 57.689 50.000 18.83 11.96 0.00 5.01
3056 3202 4.642437 TGCGGAAATTTCATAGGCATTGTA 59.358 37.500 19.49 0.00 0.00 2.41
3137 3287 2.298163 GGGTCACTAGTTTTCCTCGTGA 59.702 50.000 0.00 0.00 41.95 4.35
3141 3291 1.066358 CCGGGGTCACTAGTTTTCCTC 60.066 57.143 0.00 0.00 0.00 3.71
3158 3309 2.325082 CCAAAAGAGTCACGGCCGG 61.325 63.158 31.76 18.67 0.00 6.13
3159 3310 0.320073 TACCAAAAGAGTCACGGCCG 60.320 55.000 26.86 26.86 0.00 6.13
3160 3311 1.154197 GTACCAAAAGAGTCACGGCC 58.846 55.000 0.00 0.00 0.00 6.13
3161 3312 0.788391 CGTACCAAAAGAGTCACGGC 59.212 55.000 0.00 0.00 0.00 5.68
3181 3332 6.198687 ACACACATCAAAACGAGTGTTATTG 58.801 36.000 0.00 0.00 42.79 1.90
3189 3340 4.657055 TCACAAACACACATCAAAACGAG 58.343 39.130 0.00 0.00 0.00 4.18
3190 3341 4.686839 TCACAAACACACATCAAAACGA 57.313 36.364 0.00 0.00 0.00 3.85
3234 3388 5.235616 CAGCATCCCAATAAACATGATTTGC 59.764 40.000 0.00 0.00 0.00 3.68
3236 3390 6.795144 TCAGCATCCCAATAAACATGATTT 57.205 33.333 0.00 0.00 0.00 2.17
3247 3401 1.210478 AGCGTAGTTCAGCATCCCAAT 59.790 47.619 0.00 0.00 35.48 3.16
3484 3638 4.261155 CCAGTGTTCAAATTCTTCTTCGCA 60.261 41.667 0.00 0.00 0.00 5.10
3503 3657 1.211457 CAAGAGCAAGCCTATCCCAGT 59.789 52.381 0.00 0.00 0.00 4.00
3531 3685 1.278985 ACATCTGCCATCGAGTCCAAA 59.721 47.619 0.00 0.00 0.00 3.28
3549 3703 2.360801 GCACTTTGGGCAGAAAACTACA 59.639 45.455 0.00 0.00 0.00 2.74
3552 3706 0.385390 CGCACTTTGGGCAGAAAACT 59.615 50.000 0.00 0.00 0.00 2.66
3570 3724 3.727673 CGTCTTCCATGCAACCAATTACG 60.728 47.826 0.00 0.00 0.00 3.18
3583 3737 3.430929 GCAGTGTTATCCTCGTCTTCCAT 60.431 47.826 0.00 0.00 0.00 3.41
3693 3847 0.988832 TTACCTTCCGGTGCTGGATT 59.011 50.000 0.00 0.00 45.18 3.01
3764 3933 4.142790 TCTTACAAAACCGCCCATAAACA 58.857 39.130 0.00 0.00 0.00 2.83
3773 3942 5.358298 AGATCAGTTTCTTACAAAACCGC 57.642 39.130 0.00 0.00 39.46 5.68
3801 3973 7.781324 AGTCTTTGGGTCACAATAATTCAAT 57.219 32.000 0.00 0.00 39.21 2.57
3802 3974 8.739039 CATAGTCTTTGGGTCACAATAATTCAA 58.261 33.333 0.00 0.00 39.21 2.69
3805 3977 8.877864 TTCATAGTCTTTGGGTCACAATAATT 57.122 30.769 0.00 0.00 39.21 1.40
3825 3997 9.982291 GTAAATAAACGAACTCATTGCTTCATA 57.018 29.630 0.00 0.00 0.00 2.15
3830 4002 7.448748 AAGGTAAATAAACGAACTCATTGCT 57.551 32.000 0.00 0.00 0.00 3.91
3911 4087 4.202295 TGCCTGTGGTCATAAAAATTGCAA 60.202 37.500 0.00 0.00 0.00 4.08
3967 4143 6.319141 AGTTCTTTAATGTTCAGCAGTTCC 57.681 37.500 0.00 0.00 0.00 3.62
4096 4272 0.892755 CATTGACTGGCTTGCCACAT 59.107 50.000 10.65 1.67 0.00 3.21
4113 4289 5.300752 CCTACTTGAAATGATCGTAGCCAT 58.699 41.667 0.00 0.00 0.00 4.40
4550 4726 3.055328 TCTCCCATTCTGCAATATCCCA 58.945 45.455 0.00 0.00 0.00 4.37
4768 4944 4.637387 TCGGTTAGGAGTATAGAGAGGG 57.363 50.000 0.00 0.00 0.00 4.30
4878 5056 0.390603 TATCGACCACCCGTTTGCAG 60.391 55.000 0.00 0.00 0.00 4.41
4929 5107 1.425066 TCAAGCCCCAGACACTCAATT 59.575 47.619 0.00 0.00 0.00 2.32
5044 5222 8.864069 TTCACACATTTTCACGATAAAATTGT 57.136 26.923 8.92 12.05 37.03 2.71
5055 5233 7.156876 TCTCCCATATTTCACACATTTTCAC 57.843 36.000 0.00 0.00 0.00 3.18
5057 5235 9.090692 CATTTCTCCCATATTTCACACATTTTC 57.909 33.333 0.00 0.00 0.00 2.29
5088 6823 6.477688 CGCCTATTTCAATCATTTTTGCTGAT 59.522 34.615 0.00 0.00 34.86 2.90
5180 6915 3.099905 TCCCCATATCATCTGGTCGATC 58.900 50.000 0.00 0.00 31.44 3.69
5238 6974 3.968096 CGTACGGAATTTATAACGAGCGA 59.032 43.478 7.57 0.00 32.35 4.93
5275 7011 6.665992 ATGACTAGAACTGGACAACTTACA 57.334 37.500 0.00 0.00 0.00 2.41
5276 7012 9.654663 ATTTATGACTAGAACTGGACAACTTAC 57.345 33.333 0.00 0.00 0.00 2.34
5277 7013 9.653287 CATTTATGACTAGAACTGGACAACTTA 57.347 33.333 0.00 0.00 0.00 2.24
5278 7014 7.119846 GCATTTATGACTAGAACTGGACAACTT 59.880 37.037 0.00 0.00 0.00 2.66
5279 7015 6.595716 GCATTTATGACTAGAACTGGACAACT 59.404 38.462 0.00 0.00 0.00 3.16
5280 7016 6.371548 TGCATTTATGACTAGAACTGGACAAC 59.628 38.462 0.00 0.00 0.00 3.32
5281 7017 6.472016 TGCATTTATGACTAGAACTGGACAA 58.528 36.000 0.00 0.00 0.00 3.18
5282 7018 6.048732 TGCATTTATGACTAGAACTGGACA 57.951 37.500 0.00 0.00 0.00 4.02
5283 7019 6.595716 ACTTGCATTTATGACTAGAACTGGAC 59.404 38.462 0.00 0.00 0.00 4.02
5291 7027 9.045223 TGCTTGTATACTTGCATTTATGACTAG 57.955 33.333 15.71 0.00 0.00 2.57
5302 7038 9.002600 CCATCTTATTATGCTTGTATACTTGCA 57.997 33.333 19.82 19.82 39.83 4.08
5303 7039 8.454106 CCCATCTTATTATGCTTGTATACTTGC 58.546 37.037 4.17 8.79 0.00 4.01
5304 7040 9.725019 TCCCATCTTATTATGCTTGTATACTTG 57.275 33.333 4.17 0.00 0.00 3.16
5305 7041 9.726438 GTCCCATCTTATTATGCTTGTATACTT 57.274 33.333 4.17 0.00 0.00 2.24
5306 7042 8.035394 CGTCCCATCTTATTATGCTTGTATACT 58.965 37.037 4.17 0.00 0.00 2.12
5309 7045 6.650807 CACGTCCCATCTTATTATGCTTGTAT 59.349 38.462 0.00 0.00 0.00 2.29
5311 7047 4.816385 CACGTCCCATCTTATTATGCTTGT 59.184 41.667 0.00 0.00 0.00 3.16
5312 7048 4.319766 GCACGTCCCATCTTATTATGCTTG 60.320 45.833 0.00 0.00 0.00 4.01
5313 7049 3.815401 GCACGTCCCATCTTATTATGCTT 59.185 43.478 0.00 0.00 0.00 3.91
5316 7052 4.621460 CGTAGCACGTCCCATCTTATTATG 59.379 45.833 0.00 0.00 36.74 1.90
5317 7053 4.806330 CGTAGCACGTCCCATCTTATTAT 58.194 43.478 0.00 0.00 36.74 1.28
5335 7071 0.031314 ACATGAGCTCCGATGCGTAG 59.969 55.000 12.15 0.00 38.13 3.51
5336 7072 0.459899 AACATGAGCTCCGATGCGTA 59.540 50.000 12.15 0.00 38.13 4.42
5337 7073 1.086067 CAACATGAGCTCCGATGCGT 61.086 55.000 12.15 0.00 38.13 5.24
5338 7074 1.086067 ACAACATGAGCTCCGATGCG 61.086 55.000 12.15 6.86 38.13 4.73
5342 7078 0.532573 GAGGACAACATGAGCTCCGA 59.467 55.000 12.15 0.00 0.00 4.55
5343 7079 0.247460 TGAGGACAACATGAGCTCCG 59.753 55.000 12.15 4.86 0.00 4.63
5344 7080 1.677217 GGTGAGGACAACATGAGCTCC 60.677 57.143 12.15 0.00 33.34 4.70
5345 7081 1.002430 TGGTGAGGACAACATGAGCTC 59.998 52.381 6.82 6.82 38.94 4.09
5346 7082 1.059098 TGGTGAGGACAACATGAGCT 58.941 50.000 0.00 0.00 38.94 4.09
5347 7083 3.631453 TGGTGAGGACAACATGAGC 57.369 52.632 0.00 0.00 38.94 4.26
5353 7089 4.578928 ACTGTTTACAATGGTGAGGACAAC 59.421 41.667 0.00 0.00 0.00 3.32
5354 7090 4.578516 CACTGTTTACAATGGTGAGGACAA 59.421 41.667 0.00 0.00 0.00 3.18
5357 7093 4.141597 TGACACTGTTTACAATGGTGAGGA 60.142 41.667 7.48 0.00 0.00 3.71
5358 7094 4.133820 TGACACTGTTTACAATGGTGAGG 58.866 43.478 7.48 0.00 0.00 3.86
5359 7095 5.947228 ATGACACTGTTTACAATGGTGAG 57.053 39.130 7.48 0.00 0.00 3.51
5360 7096 6.764379 TCTATGACACTGTTTACAATGGTGA 58.236 36.000 7.48 0.00 0.00 4.02
5361 7097 7.298122 GTTCTATGACACTGTTTACAATGGTG 58.702 38.462 0.00 0.00 0.00 4.17
5362 7098 6.430000 GGTTCTATGACACTGTTTACAATGGT 59.570 38.462 0.00 0.00 0.00 3.55
5363 7099 6.128007 GGGTTCTATGACACTGTTTACAATGG 60.128 42.308 0.00 0.00 0.00 3.16
5366 7102 6.042781 AGAGGGTTCTATGACACTGTTTACAA 59.957 38.462 0.00 0.00 32.25 2.41
5367 7103 5.542635 AGAGGGTTCTATGACACTGTTTACA 59.457 40.000 0.00 0.00 32.25 2.41
5368 7104 6.038997 AGAGGGTTCTATGACACTGTTTAC 57.961 41.667 0.00 0.00 32.25 2.01
5369 7105 6.722590 TGTAGAGGGTTCTATGACACTGTTTA 59.277 38.462 0.00 0.00 38.17 2.01
5371 7150 5.084519 TGTAGAGGGTTCTATGACACTGTT 58.915 41.667 0.00 0.00 38.17 3.16
5375 7154 5.401531 TGTTGTAGAGGGTTCTATGACAC 57.598 43.478 0.00 0.00 38.17 3.67
5379 7158 5.491982 AGCTTTGTTGTAGAGGGTTCTATG 58.508 41.667 0.00 0.00 38.17 2.23
5383 7162 3.740115 TGAGCTTTGTTGTAGAGGGTTC 58.260 45.455 0.00 0.00 0.00 3.62
5390 7169 6.299023 TGTGTAACATGAGCTTTGTTGTAG 57.701 37.500 20.29 0.00 45.67 2.74
5412 7191 5.984926 ACACAACCTCTATTGCAAATGTTTG 59.015 36.000 1.71 5.36 41.03 2.93
5450 7229 2.360844 TGTTGCGAAAAGGTGAAGACA 58.639 42.857 0.00 0.00 0.00 3.41
5461 7240 6.818142 TCTTCAAGATCATCTATGTTGCGAAA 59.182 34.615 0.00 0.00 38.44 3.46
5483 7262 3.389329 TCTCTGTTGCAGAAGTCCTTCTT 59.611 43.478 6.82 0.00 46.95 2.52
5524 7307 6.430616 TGCTGTTGTGACATCATCTTTCATTA 59.569 34.615 0.00 0.00 34.72 1.90
5529 7312 3.254166 GGTGCTGTTGTGACATCATCTTT 59.746 43.478 0.00 0.00 34.73 2.52
5535 7318 1.726791 CGTAGGTGCTGTTGTGACATC 59.273 52.381 0.00 0.00 34.72 3.06
5547 7330 0.505655 GACAACAACGACGTAGGTGC 59.494 55.000 14.03 0.00 30.49 5.01
5551 7334 1.771044 GGCGACAACAACGACGTAG 59.229 57.895 0.00 0.00 0.00 3.51
5552 7335 3.920738 GGCGACAACAACGACGTA 58.079 55.556 0.00 0.00 0.00 3.57
5555 7338 0.922111 CAAACGGCGACAACAACGAC 60.922 55.000 16.62 0.00 35.25 4.34
5556 7339 1.348938 CAAACGGCGACAACAACGA 59.651 52.632 16.62 0.00 0.00 3.85
5557 7340 2.283058 GCAAACGGCGACAACAACG 61.283 57.895 16.62 0.00 0.00 4.10
5558 7341 3.595961 GCAAACGGCGACAACAAC 58.404 55.556 16.62 0.00 0.00 3.32
5577 7360 5.163488 TGAGTTTCTACAACAAAGACGGAGA 60.163 40.000 0.00 0.00 0.00 3.71
5582 7365 6.641314 TCGAGATGAGTTTCTACAACAAAGAC 59.359 38.462 0.00 0.00 0.00 3.01
5592 7375 4.010349 TCTGCTGTCGAGATGAGTTTCTA 58.990 43.478 0.00 0.00 0.00 2.10
5601 7384 2.513753 CTAGGGATCTGCTGTCGAGAT 58.486 52.381 0.00 0.00 32.63 2.75
5606 7389 1.365633 CGGCTAGGGATCTGCTGTC 59.634 63.158 0.00 0.00 0.00 3.51
5607 7390 2.801631 GCGGCTAGGGATCTGCTGT 61.802 63.158 0.00 0.00 35.68 4.40
5626 7409 0.677414 GAAGAGGAGAGACGACCGGT 60.677 60.000 6.92 6.92 0.00 5.28
5629 7412 1.385528 GAGGAAGAGGAGAGACGACC 58.614 60.000 0.00 0.00 0.00 4.79
5633 7416 0.395173 AGCGGAGGAAGAGGAGAGAC 60.395 60.000 0.00 0.00 0.00 3.36
5652 7435 1.030457 GTAATCTCGGAGGCGAGGAA 58.970 55.000 4.96 0.00 36.71 3.36
5653 7436 1.164662 CGTAATCTCGGAGGCGAGGA 61.165 60.000 4.96 0.00 36.71 3.71
5665 7448 4.700213 ACTATTGCAAGCCAAACGTAATCT 59.300 37.500 4.94 0.00 36.92 2.40
5726 7509 2.413142 GCTGCAAGATCAGGGCACC 61.413 63.158 0.00 0.00 45.83 5.01
5760 7543 0.109226 AGACGACCTTTGCGTAGAGC 60.109 55.000 0.00 0.00 42.77 4.09
5785 7568 3.630769 CAGTACCCTCTATGTTGCGAGTA 59.369 47.826 0.00 0.00 0.00 2.59
5805 7588 1.219213 AGATCCCCTCCACTAGACCAG 59.781 57.143 0.00 0.00 0.00 4.00
5806 7589 1.062886 CAGATCCCCTCCACTAGACCA 60.063 57.143 0.00 0.00 0.00 4.02
5813 7596 0.543749 CAACCTCAGATCCCCTCCAC 59.456 60.000 0.00 0.00 0.00 4.02
5818 7601 1.077429 GCCACAACCTCAGATCCCC 60.077 63.158 0.00 0.00 0.00 4.81
5856 7639 1.702957 TCTTTCCCAAATCCTCCACGT 59.297 47.619 0.00 0.00 0.00 4.49
5864 7647 3.065925 CGCTCCAATCTCTTTCCCAAATC 59.934 47.826 0.00 0.00 0.00 2.17
5865 7648 3.019564 CGCTCCAATCTCTTTCCCAAAT 58.980 45.455 0.00 0.00 0.00 2.32
5870 7653 1.946745 CCTCGCTCCAATCTCTTTCC 58.053 55.000 0.00 0.00 0.00 3.13
5871 7654 1.134551 AGCCTCGCTCCAATCTCTTTC 60.135 52.381 0.00 0.00 30.62 2.62
5874 7657 0.975040 ACAGCCTCGCTCCAATCTCT 60.975 55.000 0.00 0.00 36.40 3.10
5885 7668 3.121030 CGCCCAAGAACAGCCTCG 61.121 66.667 0.00 0.00 0.00 4.63
5892 7675 2.359975 CCCTGGACGCCCAAGAAC 60.360 66.667 0.00 0.00 42.98 3.01
5902 7685 1.075600 CCTCTCTCTCCCCCTGGAC 60.076 68.421 0.00 0.00 35.03 4.02
5906 7689 0.553862 TCTCACCTCTCTCTCCCCCT 60.554 60.000 0.00 0.00 0.00 4.79
5942 7728 1.749634 ACTCTCCTTCCGTCGGTTATG 59.250 52.381 11.88 0.00 0.00 1.90
5944 7730 2.636830 CTACTCTCCTTCCGTCGGTTA 58.363 52.381 11.88 0.00 0.00 2.85
5946 7732 0.394080 CCTACTCTCCTTCCGTCGGT 60.394 60.000 11.88 0.00 0.00 4.69
5982 7768 1.852067 GCAACACGTGTCATGGGACC 61.852 60.000 23.61 0.89 43.65 4.46
6024 7810 4.201763 GCATCAACTGACGGATTTTCTCTC 60.202 45.833 0.00 0.00 0.00 3.20
6033 7819 0.390340 GCTCTGCATCAACTGACGGA 60.390 55.000 0.00 0.00 0.00 4.69
6035 7821 2.831597 TGCTCTGCATCAACTGACG 58.168 52.632 0.00 0.00 31.71 4.35
6102 7889 7.759489 TTGGTAATGACATAGTTTCAAAGCT 57.241 32.000 0.00 0.00 0.00 3.74
6111 7898 5.772393 TCCCTGTTTGGTAATGACATAGT 57.228 39.130 0.00 0.00 0.00 2.12
6112 7899 6.404734 GCTTTCCCTGTTTGGTAATGACATAG 60.405 42.308 0.00 0.00 0.00 2.23
6131 7918 0.744414 TGGCTGACGCATAGCTTTCC 60.744 55.000 0.00 0.00 40.92 3.13
6146 7933 9.597681 ATTGATCTTTTAGGATTATCATTGGCT 57.402 29.630 0.00 0.00 0.00 4.75
6159 7946 4.770795 ACCTGGACGATTGATCTTTTAGG 58.229 43.478 0.00 0.00 0.00 2.69
6174 7961 2.772691 CGAGGACGGCTACCTGGAC 61.773 68.421 0.00 0.00 37.93 4.02
6184 7971 0.872021 GCTGCATAGAACGAGGACGG 60.872 60.000 0.00 0.00 44.46 4.79
6188 7975 1.148157 CGTGGCTGCATAGAACGAGG 61.148 60.000 0.50 0.00 37.58 4.63
6191 7978 0.458543 AGACGTGGCTGCATAGAACG 60.459 55.000 0.50 5.80 39.77 3.95
6205 7992 0.898320 CACAAGGAGGGATCAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
6228 8015 1.256117 GCTTGTTGCAAAAGCTCAACG 59.744 47.619 25.78 12.12 45.31 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.