Multiple sequence alignment - TraesCS2D01G444000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G444000 chr2D 100.000 5616 0 0 1 5616 555217879 555223494 0.000000e+00 10371.0
1 TraesCS2D01G444000 chr2D 84.922 451 44 22 68 501 432902224 432902667 8.640000e-118 435.0
2 TraesCS2D01G444000 chr2D 85.116 430 49 13 98 516 414180245 414180670 5.200000e-115 425.0
3 TraesCS2D01G444000 chr2D 91.111 90 4 3 5379 5468 555234709 555234794 9.880000e-23 119.0
4 TraesCS2D01G444000 chr2A 88.875 2427 148 44 721 3098 694950716 694953069 0.000000e+00 2874.0
5 TraesCS2D01G444000 chr2A 96.471 1502 39 5 3305 4794 694953066 694954565 0.000000e+00 2468.0
6 TraesCS2D01G444000 chr2A 87.008 508 50 9 5115 5615 694954855 694955353 4.910000e-155 558.0
7 TraesCS2D01G444000 chr2A 83.777 413 27 21 5213 5615 694975986 694976368 6.920000e-94 355.0
8 TraesCS2D01G444000 chr2A 92.308 130 6 2 575 703 694950519 694950645 1.240000e-41 182.0
9 TraesCS2D01G444000 chr2A 83.784 74 7 4 481 554 204318756 204318824 1.310000e-06 65.8
10 TraesCS2D01G444000 chr2A 91.111 45 4 0 557 601 694950469 694950513 1.690000e-05 62.1
11 TraesCS2D01G444000 chr2B 95.750 1506 48 11 3305 4794 661776080 661777585 0.000000e+00 2412.0
12 TraesCS2D01G444000 chr2B 91.592 1558 91 15 1426 2964 661774440 661775976 0.000000e+00 2115.0
13 TraesCS2D01G444000 chr2B 90.334 1407 86 24 87 1470 661773068 661774447 0.000000e+00 1799.0
14 TraesCS2D01G444000 chr2B 84.868 760 51 22 4892 5616 661777652 661778382 0.000000e+00 708.0
15 TraesCS2D01G444000 chr2B 87.701 187 19 4 5433 5616 661832938 661833123 1.230000e-51 215.0
16 TraesCS2D01G444000 chr2B 94.595 111 5 1 2989 3098 661775973 661776083 2.690000e-38 171.0
17 TraesCS2D01G444000 chr4A 89.234 483 36 14 76 554 48509760 48509290 1.740000e-164 590.0
18 TraesCS2D01G444000 chr4A 92.793 111 8 0 3100 3210 109430589 109430479 1.620000e-35 161.0
19 TraesCS2D01G444000 chr4D 85.439 467 59 8 93 554 249205583 249206045 1.420000e-130 477.0
20 TraesCS2D01G444000 chr4D 91.304 46 3 1 3387 3431 482363635 482363680 1.690000e-05 62.1
21 TraesCS2D01G444000 chr7D 86.014 429 52 8 100 522 548615474 548615900 2.390000e-123 453.0
22 TraesCS2D01G444000 chr7A 85.814 430 52 9 100 522 632517598 632518025 1.110000e-121 448.0
23 TraesCS2D01G444000 chr1B 84.361 454 60 10 93 541 250870427 250869980 8.640000e-118 435.0
24 TraesCS2D01G444000 chr1B 93.860 114 1 5 3217 3327 470881324 470881214 3.480000e-37 167.0
25 TraesCS2D01G444000 chr1B 81.818 77 11 3 3387 3461 56061804 56061729 1.690000e-05 62.1
26 TraesCS2D01G444000 chr4B 84.368 435 62 5 93 524 263590058 263590489 6.730000e-114 422.0
27 TraesCS2D01G444000 chr4B 93.860 114 1 5 3217 3327 649830808 649830918 3.480000e-37 167.0
28 TraesCS2D01G444000 chr4B 92.857 112 8 0 3099 3210 386210234 386210345 4.500000e-36 163.0
29 TraesCS2D01G444000 chr5B 93.860 114 7 0 3098 3211 166379723 166379836 7.480000e-39 172.0
30 TraesCS2D01G444000 chr5B 81.429 70 11 2 3387 3454 395927341 395927272 7.860000e-04 56.5
31 TraesCS2D01G444000 chr5A 93.860 114 7 0 3098 3211 174594658 174594771 7.480000e-39 172.0
32 TraesCS2D01G444000 chr5A 87.069 116 9 2 3098 3207 619461000 619461115 5.910000e-25 126.0
33 TraesCS2D01G444000 chr6D 98.936 94 1 0 3218 3311 221219406 221219313 9.680000e-38 169.0
34 TraesCS2D01G444000 chr6D 90.090 111 11 0 3100 3210 403063977 403063867 1.630000e-30 145.0
35 TraesCS2D01G444000 chr6D 90.741 108 7 1 3098 3202 47938348 47938241 2.110000e-29 141.0
36 TraesCS2D01G444000 chr6A 98.936 94 1 0 3218 3311 262052140 262052047 9.680000e-38 169.0
37 TraesCS2D01G444000 chr3D 94.444 108 6 0 3103 3210 69500433 69500540 3.480000e-37 167.0
38 TraesCS2D01G444000 chr3D 91.304 46 3 1 3387 3431 2987599 2987554 1.690000e-05 62.1
39 TraesCS2D01G444000 chr1A 96.970 99 2 1 3216 3314 327008615 327008712 1.250000e-36 165.0
40 TraesCS2D01G444000 chr5D 95.192 104 4 1 3216 3319 137915343 137915241 4.500000e-36 163.0
41 TraesCS2D01G444000 chr5D 92.982 114 5 1 3098 3211 139440374 139440264 4.500000e-36 163.0
42 TraesCS2D01G444000 chrUn 92.920 113 4 4 3217 3327 369753267 369753157 1.620000e-35 161.0
43 TraesCS2D01G444000 chr7B 92.920 113 4 4 3217 3327 653186383 653186493 1.620000e-35 161.0
44 TraesCS2D01G444000 chr7B 92.982 114 2 5 3217 3327 653246565 653246675 1.620000e-35 161.0
45 TraesCS2D01G444000 chr7B 92.857 42 3 0 3387 3428 545985213 545985254 1.690000e-05 62.1
46 TraesCS2D01G444000 chr3B 97.297 37 1 0 3386 3422 778392818 778392782 4.700000e-06 63.9
47 TraesCS2D01G444000 chr3A 94.872 39 1 1 3387 3425 654588366 654588329 6.080000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G444000 chr2D 555217879 555223494 5615 False 10371.00 10371 100.0000 1 5616 1 chr2D.!!$F3 5615
1 TraesCS2D01G444000 chr2A 694950469 694955353 4884 False 1228.82 2874 91.1546 557 5615 5 chr2A.!!$F3 5058
2 TraesCS2D01G444000 chr2B 661773068 661778382 5314 False 1441.00 2412 91.4278 87 5616 5 chr2B.!!$F2 5529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
43 44 0.537371 AGGCCACACAGTAAGTTGCC 60.537 55.0 5.01 0.0 0.0 4.52 F
1368 1486 0.033699 GGGGGAGCTGAATCTGCTTT 60.034 55.0 15.61 0.0 38.7 3.51 F
2792 2976 0.249120 CCATGCTTCTGACGGTACCA 59.751 55.0 13.54 0.0 0.0 3.25 F
3958 4158 0.685458 ATCCACAGCCCAAAGATGCC 60.685 55.0 0.00 0.0 0.0 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1883 2053 1.118838 CCACCAAGACCTTTTTGCCA 58.881 50.0 0.00 0.00 0.00 4.92 R
3095 3281 0.818040 CACCGGGCTGCCCTTTATAC 60.818 60.0 33.39 7.46 42.67 1.47 R
3973 4173 0.103937 CGATGTCCTCTGCCTTCTCC 59.896 60.0 0.00 0.00 0.00 3.71 R
5573 5859 0.235144 GAGCTCTGCATTATGCTGCG 59.765 55.0 18.44 13.49 45.31 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.610714 GCTGGGCCCGCTAGCTAC 62.611 72.222 25.40 1.36 34.70 3.58
18 19 3.154473 CTGGGCCCGCTAGCTACA 61.154 66.667 19.37 3.56 0.00 2.74
19 20 3.154473 TGGGCCCGCTAGCTACAG 61.154 66.667 19.37 0.00 0.00 2.74
20 21 3.155167 GGGCCCGCTAGCTACAGT 61.155 66.667 5.69 0.00 0.00 3.55
21 22 2.107141 GGCCCGCTAGCTACAGTG 59.893 66.667 13.93 0.00 0.00 3.66
22 23 2.586357 GCCCGCTAGCTACAGTGC 60.586 66.667 13.93 2.41 0.00 4.40
23 24 3.082579 GCCCGCTAGCTACAGTGCT 62.083 63.158 13.93 3.44 46.11 4.40
24 25 1.735376 GCCCGCTAGCTACAGTGCTA 61.735 60.000 13.93 0.00 43.74 3.49
29 30 3.607871 TAGCTACAGTGCTAGGCCA 57.392 52.632 5.01 0.00 43.74 5.36
30 31 1.112113 TAGCTACAGTGCTAGGCCAC 58.888 55.000 5.01 0.00 43.74 5.01
31 32 0.904865 AGCTACAGTGCTAGGCCACA 60.905 55.000 5.01 0.00 42.10 4.17
32 33 0.741221 GCTACAGTGCTAGGCCACAC 60.741 60.000 5.01 10.72 38.18 3.82
33 34 0.608130 CTACAGTGCTAGGCCACACA 59.392 55.000 21.26 6.89 39.30 3.72
34 35 0.608130 TACAGTGCTAGGCCACACAG 59.392 55.000 21.26 16.85 39.30 3.66
35 36 1.372683 CAGTGCTAGGCCACACAGT 59.627 57.895 21.26 9.35 39.30 3.55
36 37 0.608130 CAGTGCTAGGCCACACAGTA 59.392 55.000 21.26 3.82 39.30 2.74
37 38 1.001974 CAGTGCTAGGCCACACAGTAA 59.998 52.381 21.26 0.00 39.30 2.24
38 39 1.276421 AGTGCTAGGCCACACAGTAAG 59.724 52.381 21.26 1.36 39.30 2.34
39 40 1.002087 GTGCTAGGCCACACAGTAAGT 59.998 52.381 16.19 0.00 36.77 2.24
40 41 1.697432 TGCTAGGCCACACAGTAAGTT 59.303 47.619 5.01 0.00 0.00 2.66
41 42 2.076863 GCTAGGCCACACAGTAAGTTG 58.923 52.381 5.01 0.00 0.00 3.16
42 43 2.076863 CTAGGCCACACAGTAAGTTGC 58.923 52.381 5.01 0.00 0.00 4.17
43 44 0.537371 AGGCCACACAGTAAGTTGCC 60.537 55.000 5.01 0.00 0.00 4.52
44 45 0.821711 GGCCACACAGTAAGTTGCCA 60.822 55.000 0.00 0.00 0.00 4.92
45 46 0.593128 GCCACACAGTAAGTTGCCAG 59.407 55.000 0.00 0.00 0.00 4.85
46 47 1.238439 CCACACAGTAAGTTGCCAGG 58.762 55.000 0.00 0.00 0.00 4.45
47 48 1.476833 CCACACAGTAAGTTGCCAGGT 60.477 52.381 0.00 0.00 0.00 4.00
48 49 2.224426 CCACACAGTAAGTTGCCAGGTA 60.224 50.000 0.00 0.00 0.00 3.08
49 50 3.559171 CCACACAGTAAGTTGCCAGGTAT 60.559 47.826 0.00 0.00 0.00 2.73
50 51 4.072131 CACACAGTAAGTTGCCAGGTATT 58.928 43.478 0.00 0.00 0.00 1.89
51 52 4.154195 CACACAGTAAGTTGCCAGGTATTC 59.846 45.833 0.00 0.00 0.00 1.75
52 53 4.041691 ACACAGTAAGTTGCCAGGTATTCT 59.958 41.667 0.00 0.00 0.00 2.40
53 54 4.631813 CACAGTAAGTTGCCAGGTATTCTC 59.368 45.833 0.00 0.00 0.00 2.87
54 55 4.532521 ACAGTAAGTTGCCAGGTATTCTCT 59.467 41.667 0.00 0.00 0.00 3.10
55 56 5.112686 CAGTAAGTTGCCAGGTATTCTCTC 58.887 45.833 0.00 0.00 0.00 3.20
56 57 5.026790 AGTAAGTTGCCAGGTATTCTCTCT 58.973 41.667 0.00 0.00 0.00 3.10
57 58 4.479786 AAGTTGCCAGGTATTCTCTCTC 57.520 45.455 0.00 0.00 0.00 3.20
58 59 3.718723 AGTTGCCAGGTATTCTCTCTCT 58.281 45.455 0.00 0.00 0.00 3.10
59 60 3.704061 AGTTGCCAGGTATTCTCTCTCTC 59.296 47.826 0.00 0.00 0.00 3.20
60 61 3.678965 TGCCAGGTATTCTCTCTCTCT 57.321 47.619 0.00 0.00 0.00 3.10
61 62 3.561143 TGCCAGGTATTCTCTCTCTCTC 58.439 50.000 0.00 0.00 0.00 3.20
62 63 3.204158 TGCCAGGTATTCTCTCTCTCTCT 59.796 47.826 0.00 0.00 0.00 3.10
63 64 3.821033 GCCAGGTATTCTCTCTCTCTCTC 59.179 52.174 0.00 0.00 0.00 3.20
64 65 4.446311 GCCAGGTATTCTCTCTCTCTCTCT 60.446 50.000 0.00 0.00 0.00 3.10
65 66 5.694995 CCAGGTATTCTCTCTCTCTCTCTT 58.305 45.833 0.00 0.00 0.00 2.85
66 67 6.129179 CCAGGTATTCTCTCTCTCTCTCTTT 58.871 44.000 0.00 0.00 0.00 2.52
67 68 6.263168 CCAGGTATTCTCTCTCTCTCTCTTTC 59.737 46.154 0.00 0.00 0.00 2.62
68 69 7.056635 CAGGTATTCTCTCTCTCTCTCTTTCT 58.943 42.308 0.00 0.00 0.00 2.52
69 70 7.227512 CAGGTATTCTCTCTCTCTCTCTTTCTC 59.772 44.444 0.00 0.00 0.00 2.87
70 71 7.127955 AGGTATTCTCTCTCTCTCTCTTTCTCT 59.872 40.741 0.00 0.00 0.00 3.10
71 72 7.442666 GGTATTCTCTCTCTCTCTCTTTCTCTC 59.557 44.444 0.00 0.00 0.00 3.20
72 73 6.627087 TTCTCTCTCTCTCTCTTTCTCTCT 57.373 41.667 0.00 0.00 0.00 3.10
73 74 6.227298 TCTCTCTCTCTCTCTTTCTCTCTC 57.773 45.833 0.00 0.00 0.00 3.20
74 75 5.960811 TCTCTCTCTCTCTCTTTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
75 76 6.097554 TCTCTCTCTCTCTCTTTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
76 77 5.960811 TCTCTCTCTCTCTTTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
77 78 6.097554 TCTCTCTCTCTCTTTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
78 79 5.960811 TCTCTCTCTCTTTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
79 80 6.441924 TCTCTCTCTCTTTCTCTCTCTCTCTT 59.558 42.308 0.00 0.00 0.00 2.85
80 81 7.020827 TCTCTCTCTTTCTCTCTCTCTCTTT 57.979 40.000 0.00 0.00 0.00 2.52
81 82 7.106239 TCTCTCTCTTTCTCTCTCTCTCTTTC 58.894 42.308 0.00 0.00 0.00 2.62
82 83 7.020827 TCTCTCTTTCTCTCTCTCTCTTTCT 57.979 40.000 0.00 0.00 0.00 2.52
83 84 7.106239 TCTCTCTTTCTCTCTCTCTCTTTCTC 58.894 42.308 0.00 0.00 0.00 2.87
84 85 7.020827 TCTCTTTCTCTCTCTCTCTTTCTCT 57.979 40.000 0.00 0.00 0.00 3.10
85 86 7.106239 TCTCTTTCTCTCTCTCTCTTTCTCTC 58.894 42.308 0.00 0.00 0.00 3.20
113 114 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
127 128 9.357652 CTCTCTCTCTCTTCTATTTCTGTTTTG 57.642 37.037 0.00 0.00 0.00 2.44
323 324 8.158169 TGATTTAATTCAAGAATCGAGGATGG 57.842 34.615 0.00 0.00 33.55 3.51
338 339 4.591321 AGGATGGCCTAGAAAAATGTGA 57.409 40.909 3.32 0.00 44.74 3.58
452 453 2.270434 AATTCAGAGGGGTGCTAGGA 57.730 50.000 0.00 0.00 0.00 2.94
456 457 3.414759 TCAGAGGGGTGCTAGGATTTA 57.585 47.619 0.00 0.00 0.00 1.40
548 549 3.181466 GGGCAATTATTTTAGGGCTGTGG 60.181 47.826 0.00 0.00 0.00 4.17
552 553 4.736126 ATTATTTTAGGGCTGTGGCAAC 57.264 40.909 0.00 0.00 40.87 4.17
555 556 3.449746 TTTTAGGGCTGTGGCAACTAT 57.550 42.857 0.00 0.00 40.87 2.12
689 723 5.351465 TGAGGAATATTTGTGCTTTCTCGTC 59.649 40.000 0.00 0.00 0.00 4.20
818 905 3.066814 ACCGCCTCCACGTCTACC 61.067 66.667 0.00 0.00 0.00 3.18
928 1017 1.067416 CGGCGGATCCATTTCTCGA 59.933 57.895 13.41 0.00 34.01 4.04
970 1061 2.674177 CGATTCAAGTCAGCGGTTAGGT 60.674 50.000 0.00 0.00 0.00 3.08
1076 1171 3.435186 GCCCGAGTGCTTCTTGGC 61.435 66.667 9.35 8.45 44.43 4.52
1077 1172 2.348998 CCCGAGTGCTTCTTGGCT 59.651 61.111 9.35 0.00 44.43 4.75
1098 1201 1.329906 CTCTTGATCTGGATTGCGTGC 59.670 52.381 0.00 0.00 0.00 5.34
1118 1221 2.684038 GCTAGGCTTTAGAAACAGGGGG 60.684 54.545 0.00 0.00 0.00 5.40
1158 1261 1.382522 AGATTTGGGCATACGCTGTG 58.617 50.000 0.00 0.00 38.60 3.66
1176 1281 4.258543 CTGTGCCGGGTAGATTTTCTTTA 58.741 43.478 2.18 0.00 0.00 1.85
1230 1335 6.100668 ACTAGATACTTTTCGCTCCAGAAAC 58.899 40.000 0.00 0.00 39.53 2.78
1256 1361 1.073125 TCCGGTTGGAATGTGATGTGT 59.927 47.619 0.00 0.00 42.85 3.72
1266 1371 8.388103 GTTGGAATGTGATGTGTAATAGTGTAC 58.612 37.037 0.00 0.00 0.00 2.90
1289 1395 2.740826 GCAGCCGGCAGTCGTTTA 60.741 61.111 31.54 0.00 43.97 2.01
1320 1426 5.263968 TGATTCTAGTGAAATCTCGTCCC 57.736 43.478 4.75 0.00 35.63 4.46
1351 1469 4.776322 TTCTGTGCGATGGCCGGG 62.776 66.667 2.18 0.00 38.85 5.73
1367 1485 1.611965 GGGGGAGCTGAATCTGCTT 59.388 57.895 15.61 0.39 38.70 3.91
1368 1486 0.033699 GGGGGAGCTGAATCTGCTTT 60.034 55.000 15.61 0.00 38.70 3.51
1406 1525 3.600388 CTGTCAGGGTACTCAAATCACC 58.400 50.000 0.00 0.00 0.00 4.02
1408 1527 3.007940 TGTCAGGGTACTCAAATCACCTG 59.992 47.826 0.00 0.00 45.18 4.00
1427 1546 5.707298 CACCTGGTATGTTCTGAAATGAACT 59.293 40.000 0.00 0.00 44.63 3.01
1432 1588 7.676004 TGGTATGTTCTGAAATGAACTAGTGA 58.324 34.615 0.00 0.00 44.63 3.41
1437 1593 8.450578 TGTTCTGAAATGAACTAGTGACATTT 57.549 30.769 26.72 26.72 44.63 2.32
1466 1627 7.704271 TCGATTCATCTAGTTACTGTTACTGG 58.296 38.462 9.54 6.83 0.00 4.00
1505 1666 0.674581 TGAGCCATGAACAGCCTTCG 60.675 55.000 0.00 0.00 0.00 3.79
1516 1678 0.875059 CAGCCTTCGTTGACCCTTTC 59.125 55.000 0.00 0.00 0.00 2.62
1533 1695 5.414454 ACCCTTTCTTTTTGGCAAACTTTTC 59.586 36.000 13.10 0.00 0.00 2.29
1538 1700 7.920160 TTCTTTTTGGCAAACTTTTCTTGAT 57.080 28.000 13.10 0.00 0.00 2.57
1542 1704 9.868389 CTTTTTGGCAAACTTTTCTTGATATTC 57.132 29.630 13.10 0.00 0.00 1.75
1547 1712 7.599621 TGGCAAACTTTTCTTGATATTCATGTG 59.400 33.333 0.00 0.00 0.00 3.21
1594 1759 7.937394 GCCTGTATACTTGGTTAATATCCTGTT 59.063 37.037 4.17 0.00 0.00 3.16
1606 1772 7.173390 GGTTAATATCCTGTTCCTGTTATCTGC 59.827 40.741 0.00 0.00 0.00 4.26
1628 1794 2.787473 ATGCCTACTTGCTTGTGCTA 57.213 45.000 0.00 0.00 40.48 3.49
1661 1831 8.422577 AGGTGCAAAAGGATCTTATTAGTTTT 57.577 30.769 0.00 0.00 0.00 2.43
1770 1940 8.629158 TCATAAAATGGTTATAATGGTGTCAGC 58.371 33.333 0.00 0.00 0.00 4.26
1786 1956 2.416547 GTCAGCAATAGCAAAAGAGCGA 59.583 45.455 0.00 0.00 45.49 4.93
1811 1981 5.107607 CGATTGCGTCAGTTTACAGTTTAGT 60.108 40.000 0.00 0.00 0.00 2.24
1856 2026 6.938542 GCTAGCTGCACTTACTAGTAAAATG 58.061 40.000 15.95 16.51 42.31 2.32
1870 2040 7.110155 ACTAGTAAAATGTAGTTGGGGTCATG 58.890 38.462 0.00 0.00 0.00 3.07
1883 2053 1.108776 GGTCATGCAATGCCTGTCAT 58.891 50.000 10.14 0.00 46.21 3.06
1900 2070 2.365293 GTCATGGCAAAAAGGTCTTGGT 59.635 45.455 0.00 0.00 0.00 3.67
2000 2170 4.500205 GCATAAAAGCTAGCATGATGGCAA 60.500 41.667 21.73 4.24 35.83 4.52
2114 2284 4.886489 TGCATAAAGTGGCTGCATATGTTA 59.114 37.500 4.29 0.00 40.75 2.41
2134 2304 8.766994 ATGTTACCAGCCATTTTATATGAACT 57.233 30.769 0.00 0.00 0.00 3.01
2155 2326 2.687425 TGTTGTGGTCAATGTTGTCCAG 59.313 45.455 11.14 0.00 44.77 3.86
2158 2329 3.831323 TGTGGTCAATGTTGTCCAGAAT 58.169 40.909 11.14 0.00 44.77 2.40
2175 2347 5.251932 TCCAGAATGATTAGTTTGGGGTACA 59.748 40.000 0.00 0.00 39.69 2.90
2221 2404 3.055458 TCATCGTTTTCTGCCATAGGTCA 60.055 43.478 0.00 0.00 0.00 4.02
2321 2504 7.429636 TGTGTAATGCCTTACTAGAAACAAC 57.570 36.000 12.31 1.85 38.44 3.32
2352 2535 6.183360 GCACAAGTTATCAATTTAGGCCATCT 60.183 38.462 5.01 0.00 0.00 2.90
2460 2643 8.928448 TCTTCTCATATAGCCTAGAACAACATT 58.072 33.333 0.00 0.00 0.00 2.71
2541 2725 0.588252 CAAGCACGCTTAGCACAGTT 59.412 50.000 4.70 0.00 34.50 3.16
2559 2743 4.826733 ACAGTTATGGTGAGCAATTTGTCA 59.173 37.500 0.00 0.00 0.00 3.58
2607 2791 5.474578 AGGAATTCTTTTCCTTTTCTGGC 57.525 39.130 5.23 0.00 46.21 4.85
2672 2856 1.533625 TTATGCTTGTGGTCCACTGC 58.466 50.000 22.56 23.53 35.11 4.40
2689 2873 4.920340 CCACTGCGTACTATGAATCTCATC 59.080 45.833 0.00 0.00 38.26 2.92
2792 2976 0.249120 CCATGCTTCTGACGGTACCA 59.751 55.000 13.54 0.00 0.00 3.25
2798 2982 3.252215 TGCTTCTGACGGTACCATTTTTG 59.748 43.478 13.54 0.00 0.00 2.44
2802 2986 2.556622 CTGACGGTACCATTTTTGCCTT 59.443 45.455 13.54 0.00 0.00 4.35
2898 3083 5.701855 CAATTACGCATCATTGATGGCATA 58.298 37.500 24.29 9.82 40.10 3.14
3065 3251 2.166664 AGAGATAACGAGTGAGGTTGCC 59.833 50.000 0.00 0.00 0.00 4.52
3095 3281 5.289675 GCTCTACGGCATGTGCTTAATATAG 59.710 44.000 4.84 0.00 41.70 1.31
3096 3282 6.340962 TCTACGGCATGTGCTTAATATAGT 57.659 37.500 4.84 0.00 41.70 2.12
3097 3283 7.457024 TCTACGGCATGTGCTTAATATAGTA 57.543 36.000 4.84 0.00 41.70 1.82
3098 3284 8.063200 TCTACGGCATGTGCTTAATATAGTAT 57.937 34.615 4.84 0.00 41.70 2.12
3099 3285 9.181061 TCTACGGCATGTGCTTAATATAGTATA 57.819 33.333 4.84 0.00 41.70 1.47
3100 3286 9.797556 CTACGGCATGTGCTTAATATAGTATAA 57.202 33.333 4.84 0.00 41.70 0.98
3102 3288 9.151471 ACGGCATGTGCTTAATATAGTATAAAG 57.849 33.333 4.84 0.00 41.70 1.85
3103 3289 8.604035 CGGCATGTGCTTAATATAGTATAAAGG 58.396 37.037 4.84 0.00 41.70 3.11
3104 3290 8.893727 GGCATGTGCTTAATATAGTATAAAGGG 58.106 37.037 4.84 0.00 41.70 3.95
3105 3291 8.398665 GCATGTGCTTAATATAGTATAAAGGGC 58.601 37.037 0.00 0.00 38.21 5.19
3106 3292 9.448438 CATGTGCTTAATATAGTATAAAGGGCA 57.552 33.333 0.00 1.46 0.00 5.36
3107 3293 9.672673 ATGTGCTTAATATAGTATAAAGGGCAG 57.327 33.333 9.77 0.00 0.00 4.85
3108 3294 7.606456 TGTGCTTAATATAGTATAAAGGGCAGC 59.394 37.037 9.77 0.00 0.00 5.25
3109 3295 7.065923 GTGCTTAATATAGTATAAAGGGCAGCC 59.934 40.741 1.26 1.26 0.00 4.85
3110 3296 6.542735 GCTTAATATAGTATAAAGGGCAGCCC 59.457 42.308 24.90 24.90 45.90 5.19
3120 3306 4.794648 GGCAGCCCGGTGCATGTA 62.795 66.667 19.47 0.00 45.93 2.29
3121 3307 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
3122 3308 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
3123 3309 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
3124 3310 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
3143 3329 4.577677 TGCTTGCGCAGGGTCCAA 62.578 61.111 21.88 0.00 42.25 3.53
3144 3330 4.043200 GCTTGCGCAGGGTCCAAC 62.043 66.667 21.88 0.00 35.78 3.77
3145 3331 3.365265 CTTGCGCAGGGTCCAACC 61.365 66.667 12.39 0.00 37.60 3.77
3146 3332 4.196778 TTGCGCAGGGTCCAACCA 62.197 61.111 11.31 0.00 41.02 3.67
3147 3333 4.947147 TGCGCAGGGTCCAACCAC 62.947 66.667 5.66 0.00 41.02 4.16
3148 3334 4.643387 GCGCAGGGTCCAACCACT 62.643 66.667 0.30 0.00 41.02 4.00
3149 3335 2.113139 CGCAGGGTCCAACCACTT 59.887 61.111 0.00 0.00 41.02 3.16
3150 3336 1.528309 CGCAGGGTCCAACCACTTT 60.528 57.895 0.00 0.00 41.02 2.66
3151 3337 1.795170 CGCAGGGTCCAACCACTTTG 61.795 60.000 0.00 0.00 41.02 2.77
3164 3350 6.194796 CAACCACTTTGGGTCTATTGTATG 57.805 41.667 0.00 0.00 43.37 2.39
3165 3351 4.270008 ACCACTTTGGGTCTATTGTATGC 58.730 43.478 0.00 0.00 43.37 3.14
3166 3352 4.263727 ACCACTTTGGGTCTATTGTATGCA 60.264 41.667 0.00 0.00 43.37 3.96
3167 3353 4.336433 CCACTTTGGGTCTATTGTATGCAG 59.664 45.833 0.00 0.00 32.67 4.41
3168 3354 4.943705 CACTTTGGGTCTATTGTATGCAGT 59.056 41.667 0.00 0.00 0.00 4.40
3169 3355 5.065218 CACTTTGGGTCTATTGTATGCAGTC 59.935 44.000 0.00 0.00 0.00 3.51
3170 3356 5.045578 ACTTTGGGTCTATTGTATGCAGTCT 60.046 40.000 0.00 0.00 0.00 3.24
3171 3357 5.435686 TTGGGTCTATTGTATGCAGTCTT 57.564 39.130 0.00 0.00 0.00 3.01
3172 3358 5.435686 TGGGTCTATTGTATGCAGTCTTT 57.564 39.130 0.00 0.00 0.00 2.52
3173 3359 5.428253 TGGGTCTATTGTATGCAGTCTTTC 58.572 41.667 0.00 0.00 0.00 2.62
3174 3360 4.816925 GGGTCTATTGTATGCAGTCTTTCC 59.183 45.833 0.00 0.00 0.00 3.13
3175 3361 4.816925 GGTCTATTGTATGCAGTCTTTCCC 59.183 45.833 0.00 0.00 0.00 3.97
3176 3362 5.396884 GGTCTATTGTATGCAGTCTTTCCCT 60.397 44.000 0.00 0.00 0.00 4.20
3177 3363 6.183360 GGTCTATTGTATGCAGTCTTTCCCTA 60.183 42.308 0.00 0.00 0.00 3.53
3178 3364 6.702282 GTCTATTGTATGCAGTCTTTCCCTAC 59.298 42.308 0.00 0.00 0.00 3.18
3179 3365 4.901197 TTGTATGCAGTCTTTCCCTACA 57.099 40.909 0.00 0.00 0.00 2.74
3180 3366 5.435686 TTGTATGCAGTCTTTCCCTACAT 57.564 39.130 0.00 0.00 0.00 2.29
3181 3367 5.435686 TGTATGCAGTCTTTCCCTACATT 57.564 39.130 0.00 0.00 0.00 2.71
3182 3368 5.815581 TGTATGCAGTCTTTCCCTACATTT 58.184 37.500 0.00 0.00 0.00 2.32
3183 3369 5.880332 TGTATGCAGTCTTTCCCTACATTTC 59.120 40.000 0.00 0.00 0.00 2.17
3184 3370 4.640771 TGCAGTCTTTCCCTACATTTCT 57.359 40.909 0.00 0.00 0.00 2.52
3185 3371 5.755409 TGCAGTCTTTCCCTACATTTCTA 57.245 39.130 0.00 0.00 0.00 2.10
3186 3372 6.313519 TGCAGTCTTTCCCTACATTTCTAT 57.686 37.500 0.00 0.00 0.00 1.98
3187 3373 7.432148 TGCAGTCTTTCCCTACATTTCTATA 57.568 36.000 0.00 0.00 0.00 1.31
3188 3374 7.857456 TGCAGTCTTTCCCTACATTTCTATAA 58.143 34.615 0.00 0.00 0.00 0.98
3189 3375 7.987458 TGCAGTCTTTCCCTACATTTCTATAAG 59.013 37.037 0.00 0.00 0.00 1.73
3190 3376 8.204836 GCAGTCTTTCCCTACATTTCTATAAGA 58.795 37.037 0.00 0.00 0.00 2.10
3191 3377 9.757227 CAGTCTTTCCCTACATTTCTATAAGAG 57.243 37.037 0.00 0.00 0.00 2.85
3192 3378 8.929487 AGTCTTTCCCTACATTTCTATAAGAGG 58.071 37.037 0.00 0.00 0.00 3.69
3193 3379 7.658167 GTCTTTCCCTACATTTCTATAAGAGGC 59.342 40.741 0.00 0.00 0.00 4.70
3194 3380 7.569111 TCTTTCCCTACATTTCTATAAGAGGCT 59.431 37.037 0.00 0.00 0.00 4.58
3195 3381 6.672266 TCCCTACATTTCTATAAGAGGCTG 57.328 41.667 0.00 0.00 0.00 4.85
3196 3382 6.143915 TCCCTACATTTCTATAAGAGGCTGT 58.856 40.000 0.00 0.00 0.00 4.40
3197 3383 6.615726 TCCCTACATTTCTATAAGAGGCTGTT 59.384 38.462 1.39 1.39 0.00 3.16
3198 3384 7.127339 TCCCTACATTTCTATAAGAGGCTGTTT 59.873 37.037 0.90 0.00 0.00 2.83
3199 3385 7.442666 CCCTACATTTCTATAAGAGGCTGTTTC 59.557 40.741 0.90 0.00 0.00 2.78
3200 3386 7.442666 CCTACATTTCTATAAGAGGCTGTTTCC 59.557 40.741 0.90 0.00 0.00 3.13
3201 3387 6.721318 ACATTTCTATAAGAGGCTGTTTCCA 58.279 36.000 0.90 0.00 0.00 3.53
3202 3388 6.825721 ACATTTCTATAAGAGGCTGTTTCCAG 59.174 38.462 0.90 0.00 41.91 3.86
3203 3389 5.359194 TTCTATAAGAGGCTGTTTCCAGG 57.641 43.478 0.90 0.00 39.22 4.45
3204 3390 4.620723 TCTATAAGAGGCTGTTTCCAGGA 58.379 43.478 0.90 0.00 39.22 3.86
3205 3391 3.636153 ATAAGAGGCTGTTTCCAGGAC 57.364 47.619 0.90 0.00 39.22 3.85
3206 3392 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
3207 3393 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
3208 3394 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
3209 3395 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
3210 3396 1.072965 AGGCTGTTTCCAGGACTTGAG 59.927 52.381 0.00 0.00 39.22 3.02
3211 3397 1.202818 GGCTGTTTCCAGGACTTGAGT 60.203 52.381 0.00 0.00 39.22 3.41
3212 3398 1.876156 GCTGTTTCCAGGACTTGAGTG 59.124 52.381 0.00 0.00 39.22 3.51
3213 3399 1.876156 CTGTTTCCAGGACTTGAGTGC 59.124 52.381 0.00 0.00 34.90 4.40
3215 3401 2.092429 TGTTTCCAGGACTTGAGTGCTT 60.092 45.455 2.15 0.00 44.54 3.91
3216 3402 3.135712 TGTTTCCAGGACTTGAGTGCTTA 59.864 43.478 2.15 0.00 44.54 3.09
3217 3403 4.134563 GTTTCCAGGACTTGAGTGCTTAA 58.865 43.478 2.15 0.00 44.54 1.85
3218 3404 4.640771 TTCCAGGACTTGAGTGCTTAAT 57.359 40.909 2.15 0.00 44.54 1.40
3219 3405 5.755409 TTCCAGGACTTGAGTGCTTAATA 57.245 39.130 2.15 0.00 44.54 0.98
3220 3406 5.957771 TCCAGGACTTGAGTGCTTAATAT 57.042 39.130 2.15 0.00 44.54 1.28
3221 3407 7.432148 TTCCAGGACTTGAGTGCTTAATATA 57.568 36.000 2.15 0.00 44.54 0.86
3222 3408 7.055667 TCCAGGACTTGAGTGCTTAATATAG 57.944 40.000 2.15 0.00 44.54 1.31
3223 3409 6.611642 TCCAGGACTTGAGTGCTTAATATAGT 59.388 38.462 2.15 0.00 44.54 2.12
3224 3410 7.783119 TCCAGGACTTGAGTGCTTAATATAGTA 59.217 37.037 2.15 0.00 44.54 1.82
3225 3411 7.868415 CCAGGACTTGAGTGCTTAATATAGTAC 59.132 40.741 2.15 0.00 44.54 2.73
3226 3412 8.634444 CAGGACTTGAGTGCTTAATATAGTACT 58.366 37.037 0.00 0.00 44.54 2.73
3233 3419 7.768807 AGTGCTTAATATAGTACTCCCTCTG 57.231 40.000 0.00 0.00 36.53 3.35
3234 3420 7.299134 AGTGCTTAATATAGTACTCCCTCTGT 58.701 38.462 0.00 0.00 36.53 3.41
3235 3421 8.446394 AGTGCTTAATATAGTACTCCCTCTGTA 58.554 37.037 0.00 0.00 36.53 2.74
3236 3422 9.075678 GTGCTTAATATAGTACTCCCTCTGTAA 57.924 37.037 0.00 0.00 0.00 2.41
3237 3423 9.650714 TGCTTAATATAGTACTCCCTCTGTAAA 57.349 33.333 0.00 0.00 0.00 2.01
3238 3424 9.911138 GCTTAATATAGTACTCCCTCTGTAAAC 57.089 37.037 0.00 0.00 0.00 2.01
3250 3436 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
3251 3437 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
3252 3438 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
3253 3439 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
3254 3440 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
3269 3455 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
3270 3456 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
3271 3457 8.503458 AGAGCGTTTAGATCACTACTTTAGTA 57.497 34.615 0.00 0.00 37.82 1.82
3272 3458 9.122779 AGAGCGTTTAGATCACTACTTTAGTAT 57.877 33.333 0.00 0.00 37.82 2.12
3273 3459 9.733219 GAGCGTTTAGATCACTACTTTAGTATT 57.267 33.333 0.00 0.00 37.23 1.89
3274 3460 9.733219 AGCGTTTAGATCACTACTTTAGTATTC 57.267 33.333 0.00 0.00 37.23 1.75
3275 3461 9.733219 GCGTTTAGATCACTACTTTAGTATTCT 57.267 33.333 0.00 0.00 37.23 2.40
3281 3467 9.733219 AGATCACTACTTTAGTATTCTAAACGC 57.267 33.333 0.76 0.00 40.05 4.84
3282 3468 9.733219 GATCACTACTTTAGTATTCTAAACGCT 57.267 33.333 0.76 0.00 40.05 5.07
3283 3469 9.733219 ATCACTACTTTAGTATTCTAAACGCTC 57.267 33.333 0.76 0.00 40.05 5.03
3284 3470 8.954350 TCACTACTTTAGTATTCTAAACGCTCT 58.046 33.333 0.76 0.00 40.05 4.09
3285 3471 9.570488 CACTACTTTAGTATTCTAAACGCTCTT 57.430 33.333 0.76 0.00 40.05 2.85
3299 3485 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
3300 3486 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
3301 3487 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
3302 3488 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
3303 3489 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
3304 3490 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
3354 3540 5.676552 TGGTCTACAGCAAGACAAAACTTA 58.323 37.500 13.71 0.00 46.40 2.24
3390 3576 8.729756 TCTGAATGGATTGTGTATTTGTTACTG 58.270 33.333 0.00 0.00 0.00 2.74
3515 3702 8.932945 TCTCAGCTTAAACAGTATGATGTAAG 57.067 34.615 0.00 0.00 39.69 2.34
3540 3727 1.278127 TCTTCCTTGGTTCCATCGACC 59.722 52.381 0.00 0.00 37.69 4.79
3889 4084 7.819900 GGTTAGAGATGTGTAATATCCATGTCC 59.180 40.741 0.00 0.00 34.65 4.02
3958 4158 0.685458 ATCCACAGCCCAAAGATGCC 60.685 55.000 0.00 0.00 0.00 4.40
3973 4173 0.252479 ATGCCAAGTCCTCTGCTCTG 59.748 55.000 0.00 0.00 0.00 3.35
4156 4356 0.520404 TCAGCGTCGGTACTTCAGTC 59.480 55.000 0.00 0.00 0.00 3.51
4629 4835 6.875076 TGATACTATGATGATCTGGCTGATG 58.125 40.000 11.90 0.00 35.14 3.07
4794 5002 9.537192 AATCAAACAATATTATCATGCACTTGG 57.463 29.630 0.00 0.00 0.00 3.61
4806 5042 3.777106 TGCACTTGGACTTCTCTGATT 57.223 42.857 0.00 0.00 0.00 2.57
4808 5044 4.464008 TGCACTTGGACTTCTCTGATTTT 58.536 39.130 0.00 0.00 0.00 1.82
4841 5077 6.867519 TTTTTGAGGGGTTTTCTTCTCTTT 57.132 33.333 0.00 0.00 0.00 2.52
4842 5078 6.867519 TTTTGAGGGGTTTTCTTCTCTTTT 57.132 33.333 0.00 0.00 0.00 2.27
4843 5079 6.867519 TTTGAGGGGTTTTCTTCTCTTTTT 57.132 33.333 0.00 0.00 0.00 1.94
4883 5119 9.586435 TTTTTGAGAATGGTTTTCTTCTTCTTC 57.414 29.630 0.00 0.00 31.99 2.87
4884 5120 8.525290 TTTGAGAATGGTTTTCTTCTTCTTCT 57.475 30.769 0.00 0.00 31.99 2.85
4885 5121 7.502120 TGAGAATGGTTTTCTTCTTCTTCTG 57.498 36.000 0.00 0.00 31.99 3.02
4886 5122 7.282585 TGAGAATGGTTTTCTTCTTCTTCTGA 58.717 34.615 0.00 0.00 31.99 3.27
4887 5123 7.443575 TGAGAATGGTTTTCTTCTTCTTCTGAG 59.556 37.037 0.00 0.00 31.99 3.35
4888 5124 7.512992 AGAATGGTTTTCTTCTTCTTCTGAGA 58.487 34.615 0.00 0.00 0.00 3.27
4889 5125 7.661027 AGAATGGTTTTCTTCTTCTTCTGAGAG 59.339 37.037 0.00 0.00 32.44 3.20
4890 5126 5.615289 TGGTTTTCTTCTTCTTCTGAGAGG 58.385 41.667 0.00 0.00 32.44 3.69
4895 5131 6.485830 TTCTTCTTCTTCTGAGAGGACAAA 57.514 37.500 0.00 0.00 37.69 2.83
4946 5183 3.008923 CCCAGTTATTTTTGTGGCCCAAT 59.991 43.478 0.00 0.00 31.81 3.16
4965 5202 6.408434 GCCCAATTGGACTGAATGGATAATTT 60.408 38.462 26.60 0.00 37.39 1.82
4981 5218 7.282585 TGGATAATTTCACCACTGATAGGAAG 58.717 38.462 0.00 0.00 0.00 3.46
5001 5238 8.507524 AGGAAGACTTGTATTGCCTAATTAAC 57.492 34.615 0.00 0.00 0.00 2.01
5003 5240 9.609346 GGAAGACTTGTATTGCCTAATTAACTA 57.391 33.333 0.00 0.00 0.00 2.24
5005 5242 8.664211 AGACTTGTATTGCCTAATTAACTAGC 57.336 34.615 0.00 0.00 0.00 3.42
5006 5243 7.715686 AGACTTGTATTGCCTAATTAACTAGCC 59.284 37.037 0.00 0.00 0.00 3.93
5007 5244 7.343357 ACTTGTATTGCCTAATTAACTAGCCA 58.657 34.615 0.00 0.00 0.00 4.75
5008 5245 7.499232 ACTTGTATTGCCTAATTAACTAGCCAG 59.501 37.037 0.00 0.00 0.00 4.85
5009 5246 7.131907 TGTATTGCCTAATTAACTAGCCAGA 57.868 36.000 0.00 0.00 0.00 3.86
5010 5247 7.570132 TGTATTGCCTAATTAACTAGCCAGAA 58.430 34.615 0.00 0.00 0.00 3.02
5011 5248 8.050325 TGTATTGCCTAATTAACTAGCCAGAAA 58.950 33.333 0.00 0.00 0.00 2.52
5012 5249 9.067986 GTATTGCCTAATTAACTAGCCAGAAAT 57.932 33.333 0.00 0.00 0.00 2.17
5015 5252 7.996385 TGCCTAATTAACTAGCCAGAAATTTC 58.004 34.615 10.33 10.33 0.00 2.17
5016 5253 7.834181 TGCCTAATTAACTAGCCAGAAATTTCT 59.166 33.333 15.11 15.11 38.25 2.52
5017 5254 8.346300 GCCTAATTAACTAGCCAGAAATTTCTC 58.654 37.037 17.91 8.16 34.74 2.87
5018 5255 8.552034 CCTAATTAACTAGCCAGAAATTTCTCG 58.448 37.037 17.91 12.89 34.74 4.04
5019 5256 9.314321 CTAATTAACTAGCCAGAAATTTCTCGA 57.686 33.333 17.91 3.91 34.74 4.04
5020 5257 8.561738 AATTAACTAGCCAGAAATTTCTCGAA 57.438 30.769 17.91 1.73 34.74 3.71
5021 5258 7.972832 TTAACTAGCCAGAAATTTCTCGAAA 57.027 32.000 17.91 2.99 34.74 3.46
5022 5259 6.877611 AACTAGCCAGAAATTTCTCGAAAA 57.122 33.333 17.91 2.71 34.74 2.29
5023 5260 6.877611 ACTAGCCAGAAATTTCTCGAAAAA 57.122 33.333 17.91 1.72 34.74 1.94
5050 5287 2.743928 GCCAGAAGTGAGGGCGTG 60.744 66.667 0.00 0.00 38.04 5.34
5051 5288 2.743928 CCAGAAGTGAGGGCGTGC 60.744 66.667 0.00 0.00 0.00 5.34
5052 5289 2.031012 CAGAAGTGAGGGCGTGCA 59.969 61.111 0.00 0.00 0.00 4.57
5053 5290 1.597854 CAGAAGTGAGGGCGTGCAA 60.598 57.895 0.00 0.00 0.00 4.08
5073 5310 2.115343 GCAAGAGTTCCCTTGGTAGG 57.885 55.000 0.00 0.00 42.73 3.18
5083 5320 2.514458 CCTTGGTAGGGTGCTTCATT 57.486 50.000 0.00 0.00 37.94 2.57
5103 5354 6.210796 TCATTCATTGCTGAAAACACTTCTG 58.789 36.000 0.00 0.00 44.29 3.02
5105 5356 5.173774 TCATTGCTGAAAACACTTCTGTC 57.826 39.130 0.00 0.00 0.00 3.51
5136 5395 1.162181 TGTGCTGTGCTGTGAAGAGC 61.162 55.000 0.00 0.00 39.62 4.09
5190 5451 0.320421 ACACCGGACATTTGTCGAGG 60.320 55.000 9.46 17.04 45.65 4.63
5191 5452 2.055299 ACCGGACATTTGTCGAGGT 58.945 52.632 9.46 18.01 45.33 3.85
5192 5453 0.395312 ACCGGACATTTGTCGAGGTT 59.605 50.000 9.46 7.75 46.80 3.50
5194 5455 1.508632 CGGACATTTGTCGAGGTTGT 58.491 50.000 4.72 0.00 45.65 3.32
5195 5456 2.610976 CCGGACATTTGTCGAGGTTGTA 60.611 50.000 0.00 0.00 45.65 2.41
5211 5472 4.781087 AGGTTGTATTGTAGAAGTAGGCCA 59.219 41.667 5.01 0.00 0.00 5.36
5260 5528 1.226746 GTCAGAGGTTTGTTCACCGG 58.773 55.000 0.00 0.00 42.33 5.28
5298 5566 0.680921 ATGGCACCGGACCATGAAAG 60.681 55.000 26.21 0.41 46.27 2.62
5338 5612 3.511699 TCAGAGCAGTACTATTGCGTTG 58.488 45.455 0.00 0.97 45.98 4.10
5342 5616 2.736721 AGCAGTACTATTGCGTTGTGTG 59.263 45.455 0.00 0.00 45.98 3.82
5371 5645 1.211743 TTATTGCTGCAGCGAGATCG 58.788 50.000 31.23 0.00 45.83 3.69
5432 5707 7.548196 AGAAAACAGAAAACGTTCACATCTA 57.452 32.000 0.00 0.00 36.09 1.98
5433 5708 7.630924 AGAAAACAGAAAACGTTCACATCTAG 58.369 34.615 0.00 2.26 36.09 2.43
5434 5709 6.920569 AAACAGAAAACGTTCACATCTAGT 57.079 33.333 0.00 2.81 36.09 2.57
5435 5710 8.428186 AAAACAGAAAACGTTCACATCTAGTA 57.572 30.769 0.00 0.00 36.09 1.82
5484 5759 1.515304 GAGCTCTTCTCACGGTCGC 60.515 63.158 6.43 0.00 41.51 5.19
5562 5840 2.402305 GAAGCTCGACATATCTGCAGG 58.598 52.381 15.13 0.00 0.00 4.85
5564 5842 0.249615 GCTCGACATATCTGCAGGCA 60.250 55.000 15.13 1.80 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.610714 GTAGCTAGCGGGCCCAGC 62.611 72.222 24.92 25.18 35.49 4.85
1 2 3.154473 TGTAGCTAGCGGGCCCAG 61.154 66.667 24.92 16.07 0.00 4.45
2 3 3.154473 CTGTAGCTAGCGGGCCCA 61.154 66.667 24.92 0.00 0.00 5.36
3 4 3.155167 ACTGTAGCTAGCGGGCCC 61.155 66.667 13.57 13.57 0.00 5.80
4 5 2.107141 CACTGTAGCTAGCGGGCC 59.893 66.667 9.55 0.00 0.00 5.80
5 6 1.735376 TAGCACTGTAGCTAGCGGGC 61.735 60.000 9.55 7.84 44.50 6.13
6 7 2.415825 TAGCACTGTAGCTAGCGGG 58.584 57.895 9.55 0.00 44.50 6.13
11 12 1.112113 GTGGCCTAGCACTGTAGCTA 58.888 55.000 3.32 10.17 44.50 3.32
13 14 0.741221 GTGTGGCCTAGCACTGTAGC 60.741 60.000 3.32 0.00 33.22 3.58
14 15 0.608130 TGTGTGGCCTAGCACTGTAG 59.392 55.000 20.40 0.00 36.63 2.74
15 16 0.608130 CTGTGTGGCCTAGCACTGTA 59.392 55.000 20.40 5.91 36.63 2.74
16 17 1.372683 CTGTGTGGCCTAGCACTGT 59.627 57.895 20.40 0.00 36.63 3.55
17 18 0.608130 TACTGTGTGGCCTAGCACTG 59.392 55.000 21.23 21.23 39.42 3.66
18 19 1.276421 CTTACTGTGTGGCCTAGCACT 59.724 52.381 20.40 8.92 36.63 4.40
19 20 1.002087 ACTTACTGTGTGGCCTAGCAC 59.998 52.381 3.32 11.35 36.26 4.40
20 21 1.348064 ACTTACTGTGTGGCCTAGCA 58.652 50.000 3.32 0.00 0.00 3.49
21 22 2.076863 CAACTTACTGTGTGGCCTAGC 58.923 52.381 3.32 0.00 0.00 3.42
22 23 2.076863 GCAACTTACTGTGTGGCCTAG 58.923 52.381 3.32 0.00 0.00 3.02
23 24 1.271163 GGCAACTTACTGTGTGGCCTA 60.271 52.381 3.32 0.00 37.85 3.93
24 25 0.537371 GGCAACTTACTGTGTGGCCT 60.537 55.000 3.32 0.00 37.85 5.19
25 26 0.821711 TGGCAACTTACTGTGTGGCC 60.822 55.000 9.21 9.21 39.86 5.36
26 27 0.593128 CTGGCAACTTACTGTGTGGC 59.407 55.000 0.00 0.00 34.98 5.01
27 28 1.238439 CCTGGCAACTTACTGTGTGG 58.762 55.000 0.00 0.00 37.61 4.17
28 29 1.967319 ACCTGGCAACTTACTGTGTG 58.033 50.000 0.00 0.00 37.61 3.82
29 30 4.041691 AGAATACCTGGCAACTTACTGTGT 59.958 41.667 0.00 0.00 37.61 3.72
30 31 4.579869 AGAATACCTGGCAACTTACTGTG 58.420 43.478 0.00 0.00 37.61 3.66
31 32 4.532521 AGAGAATACCTGGCAACTTACTGT 59.467 41.667 0.00 0.00 37.61 3.55
32 33 5.091261 AGAGAATACCTGGCAACTTACTG 57.909 43.478 0.00 0.00 37.61 2.74
33 34 5.026790 AGAGAGAATACCTGGCAACTTACT 58.973 41.667 0.00 0.00 37.61 2.24
34 35 5.128008 AGAGAGAGAATACCTGGCAACTTAC 59.872 44.000 0.00 0.00 37.61 2.34
35 36 5.273208 AGAGAGAGAATACCTGGCAACTTA 58.727 41.667 0.00 0.00 37.61 2.24
36 37 4.100373 AGAGAGAGAATACCTGGCAACTT 58.900 43.478 0.00 0.00 37.61 2.66
37 38 3.704061 GAGAGAGAGAATACCTGGCAACT 59.296 47.826 0.00 0.00 37.61 3.16
38 39 3.704061 AGAGAGAGAGAATACCTGGCAAC 59.296 47.826 0.00 0.00 0.00 4.17
39 40 3.957497 GAGAGAGAGAGAATACCTGGCAA 59.043 47.826 0.00 0.00 0.00 4.52
40 41 3.204158 AGAGAGAGAGAGAATACCTGGCA 59.796 47.826 0.00 0.00 0.00 4.92
41 42 3.821033 GAGAGAGAGAGAGAATACCTGGC 59.179 52.174 0.00 0.00 0.00 4.85
42 43 5.310409 AGAGAGAGAGAGAGAATACCTGG 57.690 47.826 0.00 0.00 0.00 4.45
43 44 7.056635 AGAAAGAGAGAGAGAGAGAATACCTG 58.943 42.308 0.00 0.00 0.00 4.00
44 45 7.127955 AGAGAAAGAGAGAGAGAGAGAATACCT 59.872 40.741 0.00 0.00 0.00 3.08
45 46 7.283329 AGAGAAAGAGAGAGAGAGAGAATACC 58.717 42.308 0.00 0.00 0.00 2.73
46 47 8.207545 AGAGAGAAAGAGAGAGAGAGAGAATAC 58.792 40.741 0.00 0.00 0.00 1.89
47 48 8.324191 AGAGAGAAAGAGAGAGAGAGAGAATA 57.676 38.462 0.00 0.00 0.00 1.75
48 49 7.127032 AGAGAGAGAAAGAGAGAGAGAGAGAAT 59.873 40.741 0.00 0.00 0.00 2.40
49 50 6.441924 AGAGAGAGAAAGAGAGAGAGAGAGAA 59.558 42.308 0.00 0.00 0.00 2.87
50 51 5.960811 AGAGAGAGAAAGAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
51 52 6.098124 AGAGAGAGAGAAAGAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
52 53 5.960811 AGAGAGAGAGAAAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
53 54 6.098124 AGAGAGAGAGAGAAAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
54 55 5.960811 AGAGAGAGAGAGAAAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
55 56 6.232581 AGAGAGAGAGAGAAAGAGAGAGAG 57.767 45.833 0.00 0.00 0.00 3.20
56 57 6.627087 AAGAGAGAGAGAGAAAGAGAGAGA 57.373 41.667 0.00 0.00 0.00 3.10
57 58 7.108847 AGAAAGAGAGAGAGAGAAAGAGAGAG 58.891 42.308 0.00 0.00 0.00 3.20
58 59 7.020827 AGAAAGAGAGAGAGAGAAAGAGAGA 57.979 40.000 0.00 0.00 0.00 3.10
59 60 7.108847 AGAGAAAGAGAGAGAGAGAAAGAGAG 58.891 42.308 0.00 0.00 0.00 3.20
60 61 7.020827 AGAGAAAGAGAGAGAGAGAAAGAGA 57.979 40.000 0.00 0.00 0.00 3.10
61 62 7.108847 AGAGAGAAAGAGAGAGAGAGAAAGAG 58.891 42.308 0.00 0.00 0.00 2.85
62 63 7.020827 AGAGAGAAAGAGAGAGAGAGAAAGA 57.979 40.000 0.00 0.00 0.00 2.52
63 64 7.108847 AGAGAGAGAAAGAGAGAGAGAGAAAG 58.891 42.308 0.00 0.00 0.00 2.62
64 65 7.020827 AGAGAGAGAAAGAGAGAGAGAGAAA 57.979 40.000 0.00 0.00 0.00 2.52
65 66 6.441924 AGAGAGAGAGAAAGAGAGAGAGAGAA 59.558 42.308 0.00 0.00 0.00 2.87
66 67 5.960811 AGAGAGAGAGAAAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
67 68 6.098124 AGAGAGAGAGAGAAAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
68 69 5.960811 AGAGAGAGAGAGAAAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
69 70 6.098124 AGAGAGAGAGAGAGAAAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
70 71 5.960811 AGAGAGAGAGAGAGAAAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
71 72 6.098124 AGAGAGAGAGAGAGAGAAAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
72 73 5.960811 AGAGAGAGAGAGAGAGAAAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
73 74 6.098124 AGAGAGAGAGAGAGAGAGAAAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
74 75 5.960811 AGAGAGAGAGAGAGAGAGAAAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
75 76 6.098124 AGAGAGAGAGAGAGAGAGAGAAAGAG 59.902 46.154 0.00 0.00 0.00 2.85
76 77 5.960811 AGAGAGAGAGAGAGAGAGAGAAAGA 59.039 44.000 0.00 0.00 0.00 2.52
77 78 6.098124 AGAGAGAGAGAGAGAGAGAGAGAAAG 59.902 46.154 0.00 0.00 0.00 2.62
78 79 5.960811 AGAGAGAGAGAGAGAGAGAGAGAAA 59.039 44.000 0.00 0.00 0.00 2.52
79 80 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
80 81 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
81 82 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
82 83 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
83 84 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
84 85 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
85 86 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
176 177 7.173047 GTGCCCACAAATATTTTCATGAGTTTT 59.827 33.333 0.00 0.00 0.00 2.43
183 184 7.222872 TCAAAAGTGCCCACAAATATTTTCAT 58.777 30.769 0.00 0.00 0.00 2.57
185 186 7.489574 TTCAAAAGTGCCCACAAATATTTTC 57.510 32.000 0.00 0.00 0.00 2.29
195 196 6.463995 TGGATATATTTCAAAAGTGCCCAC 57.536 37.500 0.00 0.00 0.00 4.61
214 215 0.773644 ACAGTTGAGGGCTGTTGGAT 59.226 50.000 0.00 0.00 43.87 3.41
311 312 3.753294 TTTCTAGGCCATCCTCGATTC 57.247 47.619 5.01 0.00 43.06 2.52
316 317 4.526970 TCACATTTTTCTAGGCCATCCTC 58.473 43.478 5.01 0.00 43.06 3.71
369 370 9.260002 TGCCTTTAGAAAAGTTCATCATTTTTC 57.740 29.630 1.75 1.75 39.76 2.29
377 378 6.936335 CCCAAAATGCCTTTAGAAAAGTTCAT 59.064 34.615 0.00 0.32 0.00 2.57
389 390 4.703379 TCAATGAACCCAAAATGCCTTT 57.297 36.364 0.00 0.00 0.00 3.11
439 440 4.706842 TGATTAAATCCTAGCACCCCTC 57.293 45.455 0.00 0.00 0.00 4.30
525 526 3.038280 ACAGCCCTAAAATAATTGCCCC 58.962 45.455 0.00 0.00 0.00 5.80
526 527 3.181466 CCACAGCCCTAAAATAATTGCCC 60.181 47.826 0.00 0.00 0.00 5.36
548 549 8.045176 ACTGAGTTCAATAAAGGAATAGTTGC 57.955 34.615 0.00 0.00 0.00 4.17
555 556 9.807921 AAGGAAATACTGAGTTCAATAAAGGAA 57.192 29.630 0.00 0.00 31.12 3.36
662 696 6.037500 CGAGAAAGCACAAATATTCCTCATCA 59.962 38.462 0.00 0.00 0.00 3.07
663 697 6.037610 ACGAGAAAGCACAAATATTCCTCATC 59.962 38.462 0.00 0.00 0.00 2.92
818 905 4.680237 TGCCGTCCAACTCCAGCG 62.680 66.667 0.00 0.00 0.00 5.18
880 967 0.769247 GCGGGATTTATAGGTGGGGT 59.231 55.000 0.00 0.00 0.00 4.95
928 1017 5.011586 TCGGGAAACGGGAAGAAAAATATT 58.988 37.500 0.00 0.00 44.45 1.28
970 1061 1.432251 GACGCCGAGATCTCCGAAA 59.568 57.895 22.90 0.00 0.00 3.46
1076 1171 2.864946 CACGCAATCCAGATCAAGAGAG 59.135 50.000 0.00 0.00 0.00 3.20
1077 1172 2.897436 CACGCAATCCAGATCAAGAGA 58.103 47.619 0.00 0.00 0.00 3.10
1098 1201 2.576648 ACCCCCTGTTTCTAAAGCCTAG 59.423 50.000 0.00 0.00 0.00 3.02
1158 1261 4.510571 TGACTAAAGAAAATCTACCCGGC 58.489 43.478 0.00 0.00 0.00 6.13
1160 1263 8.512138 ACAAATTGACTAAAGAAAATCTACCCG 58.488 33.333 0.00 0.00 0.00 5.28
1176 1281 3.565307 TCTTTGGCAGGACAAATTGACT 58.435 40.909 0.00 0.00 39.39 3.41
1206 1311 5.916661 TTCTGGAGCGAAAAGTATCTAGT 57.083 39.130 0.00 0.00 0.00 2.57
1207 1312 6.254589 CAGTTTCTGGAGCGAAAAGTATCTAG 59.745 42.308 0.00 0.00 34.93 2.43
1208 1313 6.100004 CAGTTTCTGGAGCGAAAAGTATCTA 58.900 40.000 0.00 0.00 34.93 1.98
1230 1335 2.093181 TCACATTCCAACCGGATACCAG 60.093 50.000 9.46 0.00 42.41 4.00
1235 1340 2.290896 ACACATCACATTCCAACCGGAT 60.291 45.455 9.46 0.00 42.41 4.18
1239 1344 6.374333 ACACTATTACACATCACATTCCAACC 59.626 38.462 0.00 0.00 0.00 3.77
1240 1345 7.377766 ACACTATTACACATCACATTCCAAC 57.622 36.000 0.00 0.00 0.00 3.77
1242 1347 7.045416 GGTACACTATTACACATCACATTCCA 58.955 38.462 0.00 0.00 0.00 3.53
1250 1355 4.795308 GCCTCCGGTACACTATTACACATC 60.795 50.000 0.00 0.00 0.00 3.06
1256 1361 1.684983 GCTGCCTCCGGTACACTATTA 59.315 52.381 0.00 0.00 0.00 0.98
1283 1389 9.878667 TCACTAGAATCAATTGGTAATAAACGA 57.121 29.630 5.42 0.00 0.00 3.85
1320 1426 1.289109 ACAGAATGCCGACCGAAACG 61.289 55.000 0.00 0.00 42.53 3.60
1351 1469 1.340405 TGGAAAGCAGATTCAGCTCCC 60.340 52.381 3.86 9.19 42.53 4.30
1373 1491 2.092753 ACCCTGACAGCATTCTACATGG 60.093 50.000 0.00 0.00 0.00 3.66
1389 1507 2.305927 ACCAGGTGATTTGAGTACCCTG 59.694 50.000 0.00 0.00 35.03 4.45
1427 1546 9.468532 CTAGATGAATCGATTGAAATGTCACTA 57.531 33.333 16.96 8.63 31.90 2.74
1432 1588 9.823647 AGTAACTAGATGAATCGATTGAAATGT 57.176 29.630 16.96 7.55 0.00 2.71
1437 1593 9.731819 GTAACAGTAACTAGATGAATCGATTGA 57.268 33.333 16.96 7.77 0.00 2.57
1457 1613 1.276622 ACACCTAGCCCCAGTAACAG 58.723 55.000 0.00 0.00 0.00 3.16
1466 1627 1.202770 ACAAGTCACAACACCTAGCCC 60.203 52.381 0.00 0.00 0.00 5.19
1505 1666 3.535280 TGCCAAAAAGAAAGGGTCAAC 57.465 42.857 0.00 0.00 0.00 3.18
1516 1678 9.868389 GAATATCAAGAAAAGTTTGCCAAAAAG 57.132 29.630 0.00 0.00 0.00 2.27
1533 1695 5.353400 AGTCACTGCACACATGAATATCAAG 59.647 40.000 0.00 0.00 0.00 3.02
1538 1700 3.244526 ACCAGTCACTGCACACATGAATA 60.245 43.478 0.00 0.00 0.00 1.75
1542 1704 1.311859 AACCAGTCACTGCACACATG 58.688 50.000 0.00 0.00 0.00 3.21
1547 1712 2.294074 TGGTTAAACCAGTCACTGCAC 58.706 47.619 0.00 0.00 44.79 4.57
1594 1759 4.901849 AGTAGGCATAAGCAGATAACAGGA 59.098 41.667 0.00 0.00 44.61 3.86
1606 1772 3.012518 AGCACAAGCAAGTAGGCATAAG 58.987 45.455 0.00 0.00 45.49 1.73
1628 1794 9.700831 ATAAGATCCTTTTGCACCTAATACTTT 57.299 29.630 0.00 0.00 0.00 2.66
1661 1831 3.808726 GGTGCTCACAATGCAATGAAAAA 59.191 39.130 9.20 0.00 42.41 1.94
1679 1849 7.312154 TGATTGTTACATAACATTCTTGGTGC 58.688 34.615 19.62 0.00 44.72 5.01
1760 1930 4.081406 TCTTTTGCTATTGCTGACACCAT 58.919 39.130 0.00 0.00 40.48 3.55
1770 1940 3.933155 ATCGTCGCTCTTTTGCTATTG 57.067 42.857 0.00 0.00 0.00 1.90
1844 2014 7.795534 TGACCCCAACTACATTTTACTAGTA 57.204 36.000 0.00 0.00 0.00 1.82
1856 2026 1.134946 GCATTGCATGACCCCAACTAC 59.865 52.381 3.15 0.00 0.00 2.73
1883 2053 1.118838 CCACCAAGACCTTTTTGCCA 58.881 50.000 0.00 0.00 0.00 4.92
1900 2070 7.778382 ACATGTATATAGTACTCACAGTCACCA 59.222 37.037 0.00 0.00 0.00 4.17
1939 2109 7.553760 TCAATTTGTATGCAGATCAGTATGTGT 59.446 33.333 0.00 0.00 37.40 3.72
1972 2142 5.840243 TCATGCTAGCTTTTATGCACAAT 57.160 34.783 17.23 0.00 38.29 2.71
2000 2170 5.897050 TCGAAGGTTTGCATGTTTAAACTT 58.103 33.333 18.72 10.18 37.07 2.66
2053 2223 7.672983 TTCAACCTCAGATGTTCATAAAGTC 57.327 36.000 0.00 0.00 0.00 3.01
2114 2284 6.437162 ACAACAGTTCATATAAAATGGCTGGT 59.563 34.615 11.89 5.76 31.73 4.00
2134 2304 2.687425 CTGGACAACATTGACCACAACA 59.313 45.455 11.09 0.00 45.51 3.33
2155 2326 7.881775 AATCTGTACCCCAAACTAATCATTC 57.118 36.000 0.00 0.00 0.00 2.67
2158 2329 9.762381 ATTTAAATCTGTACCCCAAACTAATCA 57.238 29.630 0.00 0.00 0.00 2.57
2221 2404 1.270907 CTTACCACCTCCACAGCTCT 58.729 55.000 0.00 0.00 0.00 4.09
2321 2504 7.649306 GCCTAAATTGATAACTTGTGCCTTATG 59.351 37.037 0.00 0.00 0.00 1.90
2352 2535 3.691609 TGCACTGTCACATAAACAACACA 59.308 39.130 0.00 0.00 0.00 3.72
2541 2725 4.650734 TCAGTGACAAATTGCTCACCATA 58.349 39.130 18.18 7.54 38.04 2.74
2559 2743 4.252073 CATCTCTTAGTGCTGCTTTCAGT 58.748 43.478 0.00 0.00 42.29 3.41
2607 2791 2.772568 TTTCAACATGCACAAGGTCG 57.227 45.000 0.00 0.00 0.00 4.79
2672 2856 8.425577 AAAAGGTTGATGAGATTCATAGTACG 57.574 34.615 0.00 0.00 37.20 3.67
2689 2873 5.277442 CCACTGCAAAGCATTTAAAAGGTTG 60.277 40.000 8.47 4.74 35.03 3.77
2972 3157 5.416013 GGCATTTATTAGGGCATAGAAGGAC 59.584 44.000 0.00 0.00 0.00 3.85
3013 3199 1.451337 TTCAACACATGCACACGGGG 61.451 55.000 0.00 0.00 0.00 5.73
3095 3281 0.818040 CACCGGGCTGCCCTTTATAC 60.818 60.000 33.39 7.46 42.67 1.47
3096 3282 1.529796 CACCGGGCTGCCCTTTATA 59.470 57.895 33.39 0.00 42.67 0.98
3097 3283 2.275418 CACCGGGCTGCCCTTTAT 59.725 61.111 33.39 14.39 42.67 1.40
3098 3284 4.733542 GCACCGGGCTGCCCTTTA 62.734 66.667 33.39 0.00 42.67 1.85
3103 3289 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
3104 3290 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
3105 3291 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
3106 3292 3.391665 GAGCTACATGCACCGGGCT 62.392 63.158 6.32 0.81 45.94 5.19
3107 3293 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
3108 3294 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
3128 3314 3.365265 GGTTGGACCCTGCGCAAG 61.365 66.667 13.05 4.91 33.53 4.01
3129 3315 4.196778 TGGTTGGACCCTGCGCAA 62.197 61.111 13.05 0.00 37.50 4.85
3130 3316 4.947147 GTGGTTGGACCCTGCGCA 62.947 66.667 10.98 10.98 37.50 6.09
3131 3317 4.643387 AGTGGTTGGACCCTGCGC 62.643 66.667 0.00 0.00 37.50 6.09
3132 3318 1.528309 AAAGTGGTTGGACCCTGCG 60.528 57.895 0.00 0.00 37.50 5.18
3133 3319 2.041153 CAAAGTGGTTGGACCCTGC 58.959 57.895 0.00 0.00 37.50 4.85
3141 3327 5.393027 GCATACAATAGACCCAAAGTGGTTG 60.393 44.000 0.00 0.00 39.24 3.77
3142 3328 4.705023 GCATACAATAGACCCAAAGTGGTT 59.295 41.667 0.00 0.00 39.24 3.67
3143 3329 4.263727 TGCATACAATAGACCCAAAGTGGT 60.264 41.667 0.00 0.00 42.79 4.16
3144 3330 4.269183 TGCATACAATAGACCCAAAGTGG 58.731 43.478 0.00 0.00 37.25 4.00
3145 3331 4.943705 ACTGCATACAATAGACCCAAAGTG 59.056 41.667 0.00 0.00 0.00 3.16
3146 3332 5.045578 AGACTGCATACAATAGACCCAAAGT 60.046 40.000 0.00 0.00 0.00 2.66
3147 3333 5.431765 AGACTGCATACAATAGACCCAAAG 58.568 41.667 0.00 0.00 0.00 2.77
3148 3334 5.435686 AGACTGCATACAATAGACCCAAA 57.564 39.130 0.00 0.00 0.00 3.28
3149 3335 5.435686 AAGACTGCATACAATAGACCCAA 57.564 39.130 0.00 0.00 0.00 4.12
3150 3336 5.428253 GAAAGACTGCATACAATAGACCCA 58.572 41.667 0.00 0.00 0.00 4.51
3151 3337 4.816925 GGAAAGACTGCATACAATAGACCC 59.183 45.833 0.00 0.00 0.00 4.46
3152 3338 4.816925 GGGAAAGACTGCATACAATAGACC 59.183 45.833 0.00 0.00 0.00 3.85
3153 3339 5.675538 AGGGAAAGACTGCATACAATAGAC 58.324 41.667 0.00 0.00 0.00 2.59
3154 3340 5.957771 AGGGAAAGACTGCATACAATAGA 57.042 39.130 0.00 0.00 0.00 1.98
3155 3341 6.582636 TGTAGGGAAAGACTGCATACAATAG 58.417 40.000 0.00 0.00 39.32 1.73
3156 3342 6.553953 TGTAGGGAAAGACTGCATACAATA 57.446 37.500 0.00 0.00 39.32 1.90
3157 3343 5.435686 TGTAGGGAAAGACTGCATACAAT 57.564 39.130 0.00 0.00 39.32 2.71
3158 3344 4.901197 TGTAGGGAAAGACTGCATACAA 57.099 40.909 0.00 0.00 39.32 2.41
3159 3345 5.435686 AATGTAGGGAAAGACTGCATACA 57.564 39.130 0.00 0.00 45.02 2.29
3160 3346 6.116126 AGAAATGTAGGGAAAGACTGCATAC 58.884 40.000 0.00 0.00 39.79 2.39
3161 3347 6.313519 AGAAATGTAGGGAAAGACTGCATA 57.686 37.500 0.00 0.00 39.79 3.14
3162 3348 5.184892 AGAAATGTAGGGAAAGACTGCAT 57.815 39.130 0.00 0.00 41.97 3.96
3163 3349 4.640771 AGAAATGTAGGGAAAGACTGCA 57.359 40.909 0.00 0.00 35.10 4.41
3164 3350 8.204836 TCTTATAGAAATGTAGGGAAAGACTGC 58.795 37.037 0.00 0.00 0.00 4.40
3165 3351 9.757227 CTCTTATAGAAATGTAGGGAAAGACTG 57.243 37.037 0.00 0.00 0.00 3.51
3166 3352 8.929487 CCTCTTATAGAAATGTAGGGAAAGACT 58.071 37.037 0.00 0.00 0.00 3.24
3167 3353 7.658167 GCCTCTTATAGAAATGTAGGGAAAGAC 59.342 40.741 0.00 0.00 0.00 3.01
3168 3354 7.569111 AGCCTCTTATAGAAATGTAGGGAAAGA 59.431 37.037 0.00 0.00 0.00 2.52
3169 3355 7.659390 CAGCCTCTTATAGAAATGTAGGGAAAG 59.341 40.741 0.00 0.00 0.00 2.62
3170 3356 7.127339 ACAGCCTCTTATAGAAATGTAGGGAAA 59.873 37.037 0.00 0.00 0.00 3.13
3171 3357 6.615726 ACAGCCTCTTATAGAAATGTAGGGAA 59.384 38.462 0.00 0.00 0.00 3.97
3172 3358 6.143915 ACAGCCTCTTATAGAAATGTAGGGA 58.856 40.000 0.00 0.00 0.00 4.20
3173 3359 6.426646 ACAGCCTCTTATAGAAATGTAGGG 57.573 41.667 0.00 0.00 0.00 3.53
3174 3360 7.442666 GGAAACAGCCTCTTATAGAAATGTAGG 59.557 40.741 0.00 0.00 0.00 3.18
3175 3361 7.987458 TGGAAACAGCCTCTTATAGAAATGTAG 59.013 37.037 0.00 0.00 35.01 2.74
3176 3362 7.857456 TGGAAACAGCCTCTTATAGAAATGTA 58.143 34.615 0.00 0.00 35.01 2.29
3177 3363 6.721318 TGGAAACAGCCTCTTATAGAAATGT 58.279 36.000 0.00 0.00 35.01 2.71
3194 3380 1.490490 AGCACTCAAGTCCTGGAAACA 59.510 47.619 0.00 0.00 39.59 2.83
3195 3381 2.262423 AGCACTCAAGTCCTGGAAAC 57.738 50.000 0.00 0.00 0.00 2.78
3196 3382 4.431416 TTAAGCACTCAAGTCCTGGAAA 57.569 40.909 0.00 0.00 0.00 3.13
3197 3383 4.640771 ATTAAGCACTCAAGTCCTGGAA 57.359 40.909 0.00 0.00 0.00 3.53
3198 3384 5.957771 ATATTAAGCACTCAAGTCCTGGA 57.042 39.130 0.00 0.00 0.00 3.86
3199 3385 6.821388 ACTATATTAAGCACTCAAGTCCTGG 58.179 40.000 0.00 0.00 0.00 4.45
3200 3386 8.634444 AGTACTATATTAAGCACTCAAGTCCTG 58.366 37.037 0.00 0.00 0.00 3.86
3201 3387 8.770010 AGTACTATATTAAGCACTCAAGTCCT 57.230 34.615 0.00 0.00 0.00 3.85
3202 3388 8.083462 GGAGTACTATATTAAGCACTCAAGTCC 58.917 40.741 0.00 0.00 40.34 3.85
3203 3389 8.083462 GGGAGTACTATATTAAGCACTCAAGTC 58.917 40.741 0.00 0.00 40.34 3.01
3204 3390 7.785506 AGGGAGTACTATATTAAGCACTCAAGT 59.214 37.037 0.00 0.00 40.34 3.16
3205 3391 8.184304 AGGGAGTACTATATTAAGCACTCAAG 57.816 38.462 0.00 0.00 40.34 3.02
3206 3392 8.005388 AGAGGGAGTACTATATTAAGCACTCAA 58.995 37.037 8.43 0.00 40.34 3.02
3207 3393 7.448777 CAGAGGGAGTACTATATTAAGCACTCA 59.551 40.741 8.43 0.00 40.34 3.41
3208 3394 7.449086 ACAGAGGGAGTACTATATTAAGCACTC 59.551 40.741 0.00 0.00 38.61 3.51
3209 3395 7.299134 ACAGAGGGAGTACTATATTAAGCACT 58.701 38.462 0.00 0.00 0.00 4.40
3210 3396 7.527568 ACAGAGGGAGTACTATATTAAGCAC 57.472 40.000 0.00 0.00 0.00 4.40
3211 3397 9.650714 TTTACAGAGGGAGTACTATATTAAGCA 57.349 33.333 0.00 0.00 0.00 3.91
3212 3398 9.911138 GTTTACAGAGGGAGTACTATATTAAGC 57.089 37.037 0.00 0.00 0.00 3.09
3224 3410 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
3225 3411 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
3226 3412 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
3227 3413 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
3228 3414 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
3243 3429 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
3244 3430 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
3245 3431 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
3246 3432 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
3247 3433 9.733219 AATACTAAAGTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 39.81 5.03
3248 3434 9.733219 GAATACTAAAGTAGTGATCTAAACGCT 57.267 33.333 0.00 0.00 39.81 5.07
3249 3435 9.733219 AGAATACTAAAGTAGTGATCTAAACGC 57.267 33.333 0.00 0.00 39.81 4.84
3255 3441 9.733219 GCGTTTAGAATACTAAAGTAGTGATCT 57.267 33.333 0.00 4.67 45.42 2.75
3256 3442 9.733219 AGCGTTTAGAATACTAAAGTAGTGATC 57.267 33.333 0.00 0.00 45.42 2.92
3257 3443 9.733219 GAGCGTTTAGAATACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
3258 3444 8.954350 AGAGCGTTTAGAATACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
3259 3445 9.570488 AAGAGCGTTTAGAATACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
3273 3459 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
3274 3460 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
3275 3461 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
3276 3462 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
3277 3463 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
3278 3464 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
3279 3465 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
3280 3466 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
3281 3467 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
3282 3468 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
3283 3469 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
3284 3470 9.646522 AAGTACTCCCTCCGTAAACTAATATAA 57.353 33.333 0.00 0.00 0.00 0.98
3286 3472 9.646522 TTAAGTACTCCCTCCGTAAACTAATAT 57.353 33.333 0.00 0.00 0.00 1.28
3287 3473 8.903820 GTTAAGTACTCCCTCCGTAAACTAATA 58.096 37.037 0.00 0.00 0.00 0.98
3288 3474 7.617329 AGTTAAGTACTCCCTCCGTAAACTAAT 59.383 37.037 0.00 0.00 28.23 1.73
3289 3475 6.948309 AGTTAAGTACTCCCTCCGTAAACTAA 59.052 38.462 0.00 0.00 28.23 2.24
3290 3476 6.485171 AGTTAAGTACTCCCTCCGTAAACTA 58.515 40.000 0.00 0.00 28.23 2.24
3291 3477 5.328565 AGTTAAGTACTCCCTCCGTAAACT 58.671 41.667 0.00 0.00 28.23 2.66
3292 3478 5.651387 AGTTAAGTACTCCCTCCGTAAAC 57.349 43.478 0.00 0.00 28.23 2.01
3293 3479 6.485171 AGTAGTTAAGTACTCCCTCCGTAAA 58.515 40.000 15.88 0.00 38.33 2.01
3294 3480 6.067217 AGTAGTTAAGTACTCCCTCCGTAA 57.933 41.667 15.88 0.00 38.33 3.18
3295 3481 5.700402 AGTAGTTAAGTACTCCCTCCGTA 57.300 43.478 15.88 0.00 38.33 4.02
3296 3482 4.582973 AGTAGTTAAGTACTCCCTCCGT 57.417 45.455 15.88 0.00 38.33 4.69
3297 3483 8.860780 ATATAAGTAGTTAAGTACTCCCTCCG 57.139 38.462 20.67 0.00 38.33 4.63
3354 3540 7.586349 ACACAATCCATTCAGAAATATAGGGT 58.414 34.615 0.00 0.00 0.00 4.34
3465 3651 7.994425 TCATGGTCACAACTTACATAACATT 57.006 32.000 0.00 0.00 0.00 2.71
3515 3702 3.873952 CGATGGAACCAAGGAAGATCTTC 59.126 47.826 24.68 24.68 38.80 2.87
3521 3708 1.739067 GGTCGATGGAACCAAGGAAG 58.261 55.000 0.00 0.00 0.00 3.46
3540 3727 9.289303 GCATGTACACATTATTTACTTGAAAGG 57.711 33.333 0.00 0.00 33.61 3.11
3671 3858 6.992123 AGAAATAGACACAATTCAGTGACACA 59.008 34.615 8.59 0.00 42.05 3.72
3841 4036 5.604650 ACCATACCTCTAGAGCAGCTAAAAT 59.395 40.000 14.73 0.00 0.00 1.82
3889 4084 4.174009 CACCAGACAAAGACCATACTACG 58.826 47.826 0.00 0.00 0.00 3.51
3958 4158 1.554836 TCTCCAGAGCAGAGGACTTG 58.445 55.000 0.00 0.00 31.96 3.16
3973 4173 0.103937 CGATGTCCTCTGCCTTCTCC 59.896 60.000 0.00 0.00 0.00 3.71
4156 4356 8.658609 TCCATTTCCTTTACTTTATCGTTTACG 58.341 33.333 0.00 0.00 41.45 3.18
4336 4536 2.203042 TTTGCCCCGACGTCGTTT 60.203 55.556 33.49 0.00 37.74 3.60
4629 4835 8.235226 CCATCTCATGTCTATTTACATTCATGC 58.765 37.037 0.00 0.00 38.01 4.06
4726 4934 1.133363 TCCAAACTCTTTCGGTCCCA 58.867 50.000 0.00 0.00 0.00 4.37
4820 5056 6.867519 AAAAAGAGAAGAAAACCCCTCAAA 57.132 33.333 0.00 0.00 0.00 2.69
4857 5093 9.586435 GAAGAAGAAGAAAACCATTCTCAAAAA 57.414 29.630 0.00 0.00 34.71 1.94
4858 5094 8.971073 AGAAGAAGAAGAAAACCATTCTCAAAA 58.029 29.630 0.00 0.00 34.71 2.44
4859 5095 8.408601 CAGAAGAAGAAGAAAACCATTCTCAAA 58.591 33.333 0.00 0.00 34.71 2.69
4860 5096 7.775093 TCAGAAGAAGAAGAAAACCATTCTCAA 59.225 33.333 0.00 0.00 34.71 3.02
4861 5097 7.282585 TCAGAAGAAGAAGAAAACCATTCTCA 58.717 34.615 0.00 0.00 34.71 3.27
4862 5098 7.659390 TCTCAGAAGAAGAAGAAAACCATTCTC 59.341 37.037 0.00 0.00 34.71 2.87
4863 5099 7.512992 TCTCAGAAGAAGAAGAAAACCATTCT 58.487 34.615 0.00 0.00 37.36 2.40
4864 5100 7.094848 CCTCTCAGAAGAAGAAGAAAACCATTC 60.095 40.741 0.00 0.00 0.00 2.67
4865 5101 6.714356 CCTCTCAGAAGAAGAAGAAAACCATT 59.286 38.462 0.00 0.00 0.00 3.16
4866 5102 6.043706 TCCTCTCAGAAGAAGAAGAAAACCAT 59.956 38.462 0.00 0.00 0.00 3.55
4867 5103 5.366768 TCCTCTCAGAAGAAGAAGAAAACCA 59.633 40.000 0.00 0.00 0.00 3.67
4868 5104 5.699001 GTCCTCTCAGAAGAAGAAGAAAACC 59.301 44.000 0.00 0.00 0.00 3.27
4869 5105 6.284459 TGTCCTCTCAGAAGAAGAAGAAAAC 58.716 40.000 0.00 0.00 0.00 2.43
4870 5106 6.485830 TGTCCTCTCAGAAGAAGAAGAAAA 57.514 37.500 0.00 0.00 0.00 2.29
4871 5107 6.485830 TTGTCCTCTCAGAAGAAGAAGAAA 57.514 37.500 0.00 0.00 0.00 2.52
4872 5108 6.485830 TTTGTCCTCTCAGAAGAAGAAGAA 57.514 37.500 0.00 0.00 0.00 2.52
4873 5109 6.098982 AGTTTTGTCCTCTCAGAAGAAGAAGA 59.901 38.462 0.00 0.00 0.00 2.87
4874 5110 6.202570 CAGTTTTGTCCTCTCAGAAGAAGAAG 59.797 42.308 0.00 0.00 0.00 2.85
4875 5111 6.051717 CAGTTTTGTCCTCTCAGAAGAAGAA 58.948 40.000 0.00 0.00 0.00 2.52
4876 5112 5.363868 TCAGTTTTGTCCTCTCAGAAGAAGA 59.636 40.000 0.00 0.00 0.00 2.87
4877 5113 5.605534 TCAGTTTTGTCCTCTCAGAAGAAG 58.394 41.667 0.00 0.00 0.00 2.85
4878 5114 5.614324 TCAGTTTTGTCCTCTCAGAAGAA 57.386 39.130 0.00 0.00 0.00 2.52
4879 5115 5.815233 ATCAGTTTTGTCCTCTCAGAAGA 57.185 39.130 0.00 0.00 0.00 2.87
4880 5116 6.929625 TCTATCAGTTTTGTCCTCTCAGAAG 58.070 40.000 0.00 0.00 0.00 2.85
4881 5117 6.918067 TCTATCAGTTTTGTCCTCTCAGAA 57.082 37.500 0.00 0.00 0.00 3.02
4882 5118 6.665248 TGATCTATCAGTTTTGTCCTCTCAGA 59.335 38.462 0.00 0.00 32.11 3.27
4883 5119 6.871844 TGATCTATCAGTTTTGTCCTCTCAG 58.128 40.000 0.00 0.00 32.11 3.35
4884 5120 6.857437 TGATCTATCAGTTTTGTCCTCTCA 57.143 37.500 0.00 0.00 32.11 3.27
4946 5183 6.152661 GTGGTGAAATTATCCATTCAGTCCAA 59.847 38.462 0.00 0.00 35.05 3.53
4965 5202 4.160329 ACAAGTCTTCCTATCAGTGGTGA 58.840 43.478 0.00 0.00 37.02 4.02
4981 5218 7.862648 GGCTAGTTAATTAGGCAATACAAGTC 58.137 38.462 21.87 0.00 43.55 3.01
5020 5257 6.039829 CCTCACTTCTGGCTAGTTTTCTTTTT 59.960 38.462 0.00 0.00 0.00 1.94
5021 5258 5.532779 CCTCACTTCTGGCTAGTTTTCTTTT 59.467 40.000 0.00 0.00 0.00 2.27
5022 5259 5.066593 CCTCACTTCTGGCTAGTTTTCTTT 58.933 41.667 0.00 0.00 0.00 2.52
5023 5260 4.505742 CCCTCACTTCTGGCTAGTTTTCTT 60.506 45.833 0.00 0.00 0.00 2.52
5024 5261 3.008485 CCCTCACTTCTGGCTAGTTTTCT 59.992 47.826 0.00 0.00 0.00 2.52
5025 5262 3.339141 CCCTCACTTCTGGCTAGTTTTC 58.661 50.000 0.00 0.00 0.00 2.29
5026 5263 2.553247 GCCCTCACTTCTGGCTAGTTTT 60.553 50.000 0.00 0.00 42.01 2.43
5027 5264 1.003696 GCCCTCACTTCTGGCTAGTTT 59.996 52.381 0.00 0.00 42.01 2.66
5028 5265 0.615850 GCCCTCACTTCTGGCTAGTT 59.384 55.000 0.00 0.00 42.01 2.24
5029 5266 1.608717 CGCCCTCACTTCTGGCTAGT 61.609 60.000 0.00 0.00 43.12 2.57
5030 5267 1.142748 CGCCCTCACTTCTGGCTAG 59.857 63.158 0.00 0.00 43.12 3.42
5031 5268 1.609501 ACGCCCTCACTTCTGGCTA 60.610 57.895 0.00 0.00 43.12 3.93
5043 5280 2.670934 CTCTTGCTTGCACGCCCT 60.671 61.111 13.19 0.00 0.00 5.19
5050 5287 0.600057 CCAAGGGAACTCTTGCTTGC 59.400 55.000 8.72 0.00 42.68 4.01
5051 5288 1.986882 ACCAAGGGAACTCTTGCTTG 58.013 50.000 8.72 0.00 42.68 4.01
5052 5289 2.040412 CCTACCAAGGGAACTCTTGCTT 59.960 50.000 8.72 1.45 42.68 3.91
5053 5290 1.630878 CCTACCAAGGGAACTCTTGCT 59.369 52.381 8.72 0.00 42.68 3.91
5073 5310 3.581024 TTCAGCAATGAATGAAGCACC 57.419 42.857 0.00 0.00 31.93 5.01
5079 5316 6.183360 ACAGAAGTGTTTTCAGCAATGAATGA 60.183 34.615 0.00 0.00 30.30 2.57
5081 5318 6.152932 ACAGAAGTGTTTTCAGCAATGAAT 57.847 33.333 0.00 0.00 30.30 2.57
5082 5319 5.125257 TGACAGAAGTGTTTTCAGCAATGAA 59.875 36.000 0.00 0.00 36.88 2.57
5083 5320 4.639755 TGACAGAAGTGTTTTCAGCAATGA 59.360 37.500 0.00 0.00 36.88 2.57
5103 5354 2.121786 CAGCACAACACAAAGCATGAC 58.878 47.619 0.00 0.00 0.00 3.06
5105 5356 1.855978 CACAGCACAACACAAAGCATG 59.144 47.619 0.00 0.00 0.00 4.06
5136 5395 2.745884 TGCACTTCCATTCGGCCG 60.746 61.111 22.12 22.12 0.00 6.13
5190 5451 5.484715 TGTGGCCTACTTCTACAATACAAC 58.515 41.667 3.32 0.00 0.00 3.32
5191 5452 5.748670 TGTGGCCTACTTCTACAATACAA 57.251 39.130 3.32 0.00 0.00 2.41
5192 5453 5.950544 ATGTGGCCTACTTCTACAATACA 57.049 39.130 3.32 0.00 0.00 2.29
5195 5456 9.338622 GTATAAAATGTGGCCTACTTCTACAAT 57.661 33.333 3.32 0.00 0.00 2.71
5211 5472 7.391620 TCTTCGTTGAAGAGGGTATAAAATGT 58.608 34.615 5.19 0.00 42.78 2.71
5260 5528 4.671766 GCCATTTGGTCACTCGTAATTGTC 60.672 45.833 0.00 0.00 37.57 3.18
5338 5612 3.543494 CAGCAATAATAAAGCGCACACAC 59.457 43.478 11.47 0.00 0.00 3.82
5342 5616 2.785477 CTGCAGCAATAATAAAGCGCAC 59.215 45.455 11.47 0.00 35.33 5.34
5347 5621 4.801147 TCTCGCTGCAGCAATAATAAAG 57.199 40.909 36.03 17.67 42.21 1.85
5432 5707 7.341805 AGCAAGTGATATGTCAAGGAAATACT 58.658 34.615 0.00 0.00 35.80 2.12
5433 5708 7.280876 TGAGCAAGTGATATGTCAAGGAAATAC 59.719 37.037 0.00 0.00 35.80 1.89
5434 5709 7.337938 TGAGCAAGTGATATGTCAAGGAAATA 58.662 34.615 0.00 0.00 35.80 1.40
5435 5710 6.182627 TGAGCAAGTGATATGTCAAGGAAAT 58.817 36.000 0.00 0.00 35.80 2.17
5474 5749 2.182030 GAAGGAGGCGACCGTGAG 59.818 66.667 0.00 0.00 34.73 3.51
5480 5755 1.079057 GACCAAGGAAGGAGGCGAC 60.079 63.158 0.00 0.00 0.00 5.19
5484 5759 2.269241 GCGGACCAAGGAAGGAGG 59.731 66.667 0.00 0.00 0.00 4.30
5571 5857 0.379669 GCTCTGCATTATGCTGCGTT 59.620 50.000 18.44 0.00 45.31 4.84
5572 5858 0.463295 AGCTCTGCATTATGCTGCGT 60.463 50.000 18.44 0.00 45.31 5.24
5573 5859 0.235144 GAGCTCTGCATTATGCTGCG 59.765 55.000 18.44 13.49 45.31 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.