Multiple sequence alignment - TraesCS2D01G443600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G443600 chr2D 100.000 4804 0 0 1 4804 554474125 554478928 0.000000e+00 8872.0
1 TraesCS2D01G443600 chr2D 97.354 718 19 0 89 806 314504399 314505116 0.000000e+00 1221.0
2 TraesCS2D01G443600 chr2D 93.000 400 23 5 4407 4804 531927462 531927066 3.220000e-161 579.0
3 TraesCS2D01G443600 chr2D 90.956 387 32 3 4404 4788 43301250 43301635 7.130000e-143 518.0
4 TraesCS2D01G443600 chr2D 82.418 182 21 10 4174 4349 427956193 427956017 1.080000e-31 148.0
5 TraesCS2D01G443600 chr2B 95.507 3049 69 35 816 3825 660675910 660678929 0.000000e+00 4809.0
6 TraesCS2D01G443600 chr2B 82.394 142 21 1 4193 4330 64186308 64186167 2.350000e-23 121.0
7 TraesCS2D01G443600 chr2B 83.607 122 7 6 3834 3950 660678975 660679088 8.510000e-18 102.0
8 TraesCS2D01G443600 chr2A 94.687 1675 42 24 816 2465 694630777 694632429 0.000000e+00 2556.0
9 TraesCS2D01G443600 chr2A 97.796 1316 24 3 2521 3831 694632635 694633950 0.000000e+00 2265.0
10 TraesCS2D01G443600 chr2A 89.130 322 17 11 3831 4142 694633981 694634294 7.540000e-103 385.0
11 TraesCS2D01G443600 chr2A 89.333 75 8 0 1659 1733 763365202 763365276 1.420000e-15 95.3
12 TraesCS2D01G443600 chr2A 100.000 28 0 0 61 88 694630760 694630787 9.000000e-03 52.8
13 TraesCS2D01G443600 chr1D 97.796 726 16 0 91 816 464931914 464931189 0.000000e+00 1253.0
14 TraesCS2D01G443600 chr1D 96.982 729 22 0 89 817 15687687 15688415 0.000000e+00 1225.0
15 TraesCS2D01G443600 chr1D 88.535 157 18 0 89 245 15688415 15688259 1.760000e-44 191.0
16 TraesCS2D01G443600 chr1D 85.987 157 22 0 661 817 15687843 15687687 8.270000e-38 169.0
17 TraesCS2D01G443600 chr3B 93.317 419 18 4 88 504 799299704 799299294 1.140000e-170 610.0
18 TraesCS2D01G443600 chr3B 93.252 326 22 0 492 817 799298347 799298022 9.350000e-132 481.0
19 TraesCS2D01G443600 chr3B 93.252 326 22 0 492 817 799298940 799298615 9.350000e-132 481.0
20 TraesCS2D01G443600 chr3B 85.833 120 13 3 706 821 745543969 745543850 1.820000e-24 124.0
21 TraesCS2D01G443600 chr3B 89.583 48 4 1 4174 4221 828258494 828258540 5.190000e-05 60.2
22 TraesCS2D01G443600 chr7B 93.062 418 19 4 89 504 579408872 579409281 1.910000e-168 603.0
23 TraesCS2D01G443600 chr7B 93.558 326 21 0 492 817 579409635 579409960 2.010000e-133 486.0
24 TraesCS2D01G443600 chr7B 90.323 155 15 0 89 243 579409960 579409806 2.270000e-48 204.0
25 TraesCS2D01G443600 chr7D 91.584 404 28 6 4404 4804 399822814 399822414 1.950000e-153 553.0
26 TraesCS2D01G443600 chr7D 91.774 389 29 3 4401 4788 403437117 403436731 5.470000e-149 538.0
27 TraesCS2D01G443600 chr7D 90.099 404 35 5 4403 4804 52710816 52711216 1.980000e-143 520.0
28 TraesCS2D01G443600 chr7D 90.885 384 33 2 4406 4788 440175751 440175369 9.220000e-142 514.0
29 TraesCS2D01G443600 chr7D 93.548 62 4 0 1671 1732 59737957 59737896 5.120000e-15 93.5
30 TraesCS2D01G443600 chr5D 91.479 399 31 3 4407 4804 387730726 387731122 3.270000e-151 545.0
31 TraesCS2D01G443600 chr5D 73.534 597 117 36 3190 3767 465720456 465719882 6.350000e-44 189.0
32 TraesCS2D01G443600 chr5B 91.228 399 33 2 4407 4804 577342036 577341639 4.230000e-150 542.0
33 TraesCS2D01G443600 chr5B 78.571 126 27 0 2956 3081 572953073 572952948 3.080000e-12 84.2
34 TraesCS2D01G443600 chr5A 92.084 379 20 3 85 463 683670174 683670542 4.260000e-145 525.0
35 TraesCS2D01G443600 chr5A 89.583 288 22 3 177 463 683745788 683745508 4.570000e-95 359.0
36 TraesCS2D01G443600 chr5A 88.889 288 24 3 177 463 681766247 681766527 9.900000e-92 348.0
37 TraesCS2D01G443600 chr5A 77.966 118 26 0 2964 3081 586151086 586150969 1.850000e-09 75.0
38 TraesCS2D01G443600 chr3D 90.537 391 31 6 4412 4800 586540429 586540815 3.320000e-141 512.0
39 TraesCS2D01G443600 chr1B 82.490 257 41 4 89 343 141760484 141760230 6.260000e-54 222.0
40 TraesCS2D01G443600 chr1B 88.496 113 12 1 706 817 141760372 141760484 8.390000e-28 135.0
41 TraesCS2D01G443600 chr1B 90.909 77 7 0 1380 1456 631821109 631821033 2.360000e-18 104.0
42 TraesCS2D01G443600 chr6D 77.650 349 58 16 1394 1734 352149733 352150069 1.360000e-45 195.0
43 TraesCS2D01G443600 chr6D 85.859 99 14 0 1659 1757 352352161 352352259 6.580000e-19 106.0
44 TraesCS2D01G443600 chr6B 77.830 212 39 5 4177 4384 559420888 559420681 1.820000e-24 124.0
45 TraesCS2D01G443600 chr6B 86.458 96 13 0 1662 1757 526724456 526724361 6.580000e-19 106.0
46 TraesCS2D01G443600 chr6B 86.458 96 13 0 1662 1757 526741584 526741489 6.580000e-19 106.0
47 TraesCS2D01G443600 chr3A 79.459 185 23 11 4174 4348 744957005 744957184 3.040000e-22 117.0
48 TraesCS2D01G443600 chr3A 79.459 185 23 11 4174 4348 745029932 745030111 3.040000e-22 117.0
49 TraesCS2D01G443600 chr3A 77.838 185 26 11 4174 4348 745096968 745097147 3.060000e-17 100.0
50 TraesCS2D01G443600 chr7A 78.571 196 27 10 4174 4360 435870264 435870453 1.090000e-21 115.0
51 TraesCS2D01G443600 chr1A 91.250 80 7 0 1377 1456 551540723 551540802 5.080000e-20 110.0
52 TraesCS2D01G443600 chr1A 84.167 120 10 6 4174 4287 113232802 113232686 1.830000e-19 108.0
53 TraesCS2D01G443600 chr6A 86.458 96 13 0 1662 1757 490499541 490499446 6.580000e-19 106.0
54 TraesCS2D01G443600 chrUn 95.238 63 3 0 1394 1456 332753254 332753192 3.060000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G443600 chr2D 554474125 554478928 4803 False 8872.0 8872 100.000000 1 4804 1 chr2D.!!$F3 4803
1 TraesCS2D01G443600 chr2D 314504399 314505116 717 False 1221.0 1221 97.354000 89 806 1 chr2D.!!$F2 717
2 TraesCS2D01G443600 chr2B 660675910 660679088 3178 False 2455.5 4809 89.557000 816 3950 2 chr2B.!!$F1 3134
3 TraesCS2D01G443600 chr2A 694630760 694634294 3534 False 1314.7 2556 95.403250 61 4142 4 chr2A.!!$F2 4081
4 TraesCS2D01G443600 chr1D 464931189 464931914 725 True 1253.0 1253 97.796000 91 816 1 chr1D.!!$R1 725
5 TraesCS2D01G443600 chr1D 15687687 15688415 728 False 1225.0 1225 96.982000 89 817 1 chr1D.!!$F1 728
6 TraesCS2D01G443600 chr3B 799298022 799299704 1682 True 524.0 610 93.273667 88 817 3 chr3B.!!$R2 729
7 TraesCS2D01G443600 chr7B 579408872 579409960 1088 False 544.5 603 93.310000 89 817 2 chr7B.!!$F1 728

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.391263 GACGAGCCCACTAAACCCAG 60.391 60.0 0.0 0.0 0.0 4.45 F
1543 2148 0.534412 CATCTCCTTCGTCACCAGCT 59.466 55.0 0.0 0.0 0.0 4.24 F
2298 2929 0.248661 CCAGCTCTACGACATCCACG 60.249 60.0 0.0 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 2497 0.749454 ATCGCCCTGCCACAGATTTC 60.749 55.0 0.0 0.0 32.44 2.17 R
3007 3817 0.907704 AGGACACGGCCTGGTTCATA 60.908 55.0 0.0 0.0 36.76 2.15 R
4149 5007 0.108089 GAAACCGAAGAGAGAGGGGC 60.108 60.0 0.0 0.0 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 5.873179 AACGAGTTTGAACTTTGAAGACA 57.127 34.783 0.00 0.00 39.88 3.41
38 39 5.217895 ACGAGTTTGAACTTTGAAGACAC 57.782 39.130 0.00 0.00 39.88 3.67
39 40 4.094442 ACGAGTTTGAACTTTGAAGACACC 59.906 41.667 0.00 0.00 39.88 4.16
40 41 4.588278 GAGTTTGAACTTTGAAGACACCG 58.412 43.478 0.00 0.00 39.88 4.94
41 42 4.258543 AGTTTGAACTTTGAAGACACCGA 58.741 39.130 0.00 0.00 35.21 4.69
42 43 4.094442 AGTTTGAACTTTGAAGACACCGAC 59.906 41.667 0.00 0.00 35.21 4.79
43 44 2.198406 TGAACTTTGAAGACACCGACG 58.802 47.619 0.00 0.00 0.00 5.12
44 45 2.159212 TGAACTTTGAAGACACCGACGA 60.159 45.455 0.00 0.00 0.00 4.20
45 46 2.135664 ACTTTGAAGACACCGACGAG 57.864 50.000 0.00 0.00 0.00 4.18
46 47 0.784778 CTTTGAAGACACCGACGAGC 59.215 55.000 0.00 0.00 0.00 5.03
47 48 0.599204 TTTGAAGACACCGACGAGCC 60.599 55.000 0.00 0.00 0.00 4.70
48 49 2.126031 GAAGACACCGACGAGCCC 60.126 66.667 0.00 0.00 0.00 5.19
49 50 2.915659 AAGACACCGACGAGCCCA 60.916 61.111 0.00 0.00 0.00 5.36
50 51 3.222354 AAGACACCGACGAGCCCAC 62.222 63.158 0.00 0.00 0.00 4.61
51 52 3.681835 GACACCGACGAGCCCACT 61.682 66.667 0.00 0.00 0.00 4.00
52 53 2.282674 ACACCGACGAGCCCACTA 60.283 61.111 0.00 0.00 0.00 2.74
53 54 1.870055 GACACCGACGAGCCCACTAA 61.870 60.000 0.00 0.00 0.00 2.24
54 55 1.290955 CACCGACGAGCCCACTAAA 59.709 57.895 0.00 0.00 0.00 1.85
55 56 1.012486 CACCGACGAGCCCACTAAAC 61.012 60.000 0.00 0.00 0.00 2.01
56 57 1.447314 CCGACGAGCCCACTAAACC 60.447 63.158 0.00 0.00 0.00 3.27
57 58 1.447314 CGACGAGCCCACTAAACCC 60.447 63.158 0.00 0.00 0.00 4.11
58 59 1.675219 GACGAGCCCACTAAACCCA 59.325 57.895 0.00 0.00 0.00 4.51
59 60 0.391263 GACGAGCCCACTAAACCCAG 60.391 60.000 0.00 0.00 0.00 4.45
169 170 1.143183 ACGTATGCTTGTAGGCCCG 59.857 57.895 0.00 0.00 0.00 6.13
245 248 5.016051 TCTCCATTCTCTCTCCAATTTCG 57.984 43.478 0.00 0.00 0.00 3.46
246 249 4.711846 TCTCCATTCTCTCTCCAATTTCGA 59.288 41.667 0.00 0.00 0.00 3.71
247 250 5.187772 TCTCCATTCTCTCTCCAATTTCGAA 59.812 40.000 0.00 0.00 0.00 3.71
601 969 4.331968 GTTGGGGTGATGACATGTTAAGA 58.668 43.478 0.00 0.00 0.00 2.10
678 1046 8.098220 TCATCGTGAAATTGAAGAAAGAATGA 57.902 30.769 0.00 0.00 0.00 2.57
879 1453 2.953648 GACGGAAAAACAGGAAAGGGAA 59.046 45.455 0.00 0.00 0.00 3.97
920 1494 6.138967 TCTCAGATTCTGGTCAATGGATCTA 58.861 40.000 13.59 0.00 31.51 1.98
924 1498 6.825213 CAGATTCTGGTCAATGGATCTAAACA 59.175 38.462 5.73 0.00 0.00 2.83
984 1560 4.406456 ACTGTTCAGACTCTGATCTGTCT 58.594 43.478 17.61 9.63 45.41 3.41
985 1561 4.458989 ACTGTTCAGACTCTGATCTGTCTC 59.541 45.833 17.61 3.48 45.41 3.36
986 1562 4.661222 TGTTCAGACTCTGATCTGTCTCT 58.339 43.478 9.63 5.28 45.41 3.10
987 1563 4.699735 TGTTCAGACTCTGATCTGTCTCTC 59.300 45.833 9.63 7.57 45.41 3.20
1235 1815 4.490899 TCCAGGTCAGTACTCTCTACTC 57.509 50.000 0.00 0.00 0.00 2.59
1543 2148 0.534412 CATCTCCTTCGTCACCAGCT 59.466 55.000 0.00 0.00 0.00 4.24
1582 2187 4.688045 CGACCCAGGTGACCTATTAGTAGA 60.688 50.000 2.59 0.00 29.64 2.59
1583 2188 5.395611 GACCCAGGTGACCTATTAGTAGAT 58.604 45.833 2.59 0.00 29.64 1.98
1584 2189 5.395611 ACCCAGGTGACCTATTAGTAGATC 58.604 45.833 2.59 0.00 29.64 2.75
1585 2190 5.136392 ACCCAGGTGACCTATTAGTAGATCT 59.864 44.000 2.59 0.00 29.64 2.75
1586 2191 5.478679 CCCAGGTGACCTATTAGTAGATCTG 59.521 48.000 2.59 0.00 29.64 2.90
1587 2192 6.071984 CCAGGTGACCTATTAGTAGATCTGT 58.928 44.000 2.59 0.00 29.64 3.41
1590 2195 7.923344 CAGGTGACCTATTAGTAGATCTGTTTG 59.077 40.741 2.59 0.00 29.64 2.93
1600 2215 6.619801 AGTAGATCTGTTTGTTGTTTCACC 57.380 37.500 5.18 0.00 0.00 4.02
1608 2223 4.882427 TGTTTGTTGTTTCACCCGATCTAA 59.118 37.500 0.00 0.00 0.00 2.10
1610 2225 4.345859 TGTTGTTTCACCCGATCTAACT 57.654 40.909 0.00 0.00 0.00 2.24
1611 2226 4.062293 TGTTGTTTCACCCGATCTAACTG 58.938 43.478 0.00 0.00 0.00 3.16
1613 2228 3.659786 TGTTTCACCCGATCTAACTGTG 58.340 45.455 0.00 0.00 0.00 3.66
1614 2229 2.380084 TTCACCCGATCTAACTGTGC 57.620 50.000 0.00 0.00 0.00 4.57
1617 2232 2.301870 TCACCCGATCTAACTGTGCTTT 59.698 45.455 0.00 0.00 0.00 3.51
1618 2233 3.074412 CACCCGATCTAACTGTGCTTTT 58.926 45.455 0.00 0.00 0.00 2.27
1619 2234 4.020928 TCACCCGATCTAACTGTGCTTTTA 60.021 41.667 0.00 0.00 0.00 1.52
1620 2235 4.092968 CACCCGATCTAACTGTGCTTTTAC 59.907 45.833 0.00 0.00 0.00 2.01
1773 2395 2.879646 CTCTCATGAGGTACCTACGTCC 59.120 54.545 22.42 2.00 39.60 4.79
1774 2396 1.955080 CTCATGAGGTACCTACGTCCC 59.045 57.143 16.29 1.17 39.60 4.46
1780 2402 0.950116 GGTACCTACGTCCCTGATCG 59.050 60.000 4.06 0.00 0.00 3.69
1781 2403 1.475751 GGTACCTACGTCCCTGATCGA 60.476 57.143 4.06 0.00 0.00 3.59
1782 2404 2.502295 GTACCTACGTCCCTGATCGAT 58.498 52.381 0.00 0.00 0.00 3.59
1792 2414 3.041211 TCCCTGATCGATGATTTGGTCT 58.959 45.455 0.54 0.00 0.00 3.85
1869 2497 7.636326 CATATCGATCTGATCTGATCTGAGAG 58.364 42.308 29.14 20.99 39.98 3.20
1870 2498 5.226194 TCGATCTGATCTGATCTGAGAGA 57.774 43.478 29.14 22.33 39.98 3.10
1871 2499 5.619220 TCGATCTGATCTGATCTGAGAGAA 58.381 41.667 29.14 12.53 39.98 2.87
1873 2501 6.716173 TCGATCTGATCTGATCTGAGAGAAAT 59.284 38.462 29.14 12.41 39.98 2.17
1874 2502 7.025365 CGATCTGATCTGATCTGAGAGAAATC 58.975 42.308 29.14 17.50 39.98 2.17
1876 2504 7.279750 TCTGATCTGATCTGAGAGAAATCTG 57.720 40.000 19.44 4.39 33.94 2.90
2298 2929 0.248661 CCAGCTCTACGACATCCACG 60.249 60.000 0.00 0.00 0.00 4.94
2460 3091 5.483811 TCTACGGCAAGTATGTTCATTTCA 58.516 37.500 0.00 0.00 34.34 2.69
2493 3300 0.387239 TCGTAGATGCATGCCGATCG 60.387 55.000 16.68 8.51 0.00 3.69
2494 3301 0.387239 CGTAGATGCATGCCGATCGA 60.387 55.000 18.66 5.98 0.00 3.59
2495 3302 1.733718 CGTAGATGCATGCCGATCGAT 60.734 52.381 18.66 0.00 0.00 3.59
2533 3340 8.491152 GCTGTTATATAAGTGCTGTGTATTGAG 58.509 37.037 10.63 0.00 0.00 3.02
2650 3457 1.673168 AGAGGTACGACGACATACCC 58.327 55.000 6.54 0.00 41.67 3.69
2911 3721 2.163412 GGCGTTGGATTAATTGCAGACA 59.837 45.455 0.00 0.00 0.00 3.41
2962 3772 2.443394 GGGTCTGATCATGCCGGGA 61.443 63.158 2.18 0.00 0.00 5.14
3007 3817 1.848652 AGGTGTACGGCTACATGAGT 58.151 50.000 0.00 0.00 35.28 3.41
3022 3832 0.249120 TGAGTATGAACCAGGCCGTG 59.751 55.000 0.00 0.00 0.00 4.94
3127 3937 5.286082 CACGCTGATTACAAATTGTTAAGCC 59.714 40.000 3.17 0.00 0.00 4.35
3849 4699 9.517609 GATCAACATAACGTGTAGAATTAGAGT 57.482 33.333 0.00 0.00 41.14 3.24
3850 4700 8.683550 TCAACATAACGTGTAGAATTAGAGTG 57.316 34.615 0.00 0.00 41.14 3.51
3855 4705 4.235360 ACGTGTAGAATTAGAGTGTGTGC 58.765 43.478 0.00 0.00 0.00 4.57
3856 4706 4.022242 ACGTGTAGAATTAGAGTGTGTGCT 60.022 41.667 0.00 0.00 0.00 4.40
3857 4707 4.324669 CGTGTAGAATTAGAGTGTGTGCTG 59.675 45.833 0.00 0.00 0.00 4.41
3858 4708 4.092091 GTGTAGAATTAGAGTGTGTGCTGC 59.908 45.833 0.00 0.00 0.00 5.25
3859 4709 3.692257 AGAATTAGAGTGTGTGCTGCT 57.308 42.857 0.00 0.00 0.00 4.24
3862 4712 2.620251 TTAGAGTGTGTGCTGCTTGT 57.380 45.000 0.00 0.00 0.00 3.16
3863 4713 2.154854 TAGAGTGTGTGCTGCTTGTC 57.845 50.000 0.00 0.00 0.00 3.18
3864 4714 0.178767 AGAGTGTGTGCTGCTTGTCA 59.821 50.000 0.00 0.00 0.00 3.58
3865 4715 1.016627 GAGTGTGTGCTGCTTGTCAA 58.983 50.000 0.00 0.00 0.00 3.18
3869 4719 1.067364 TGTGTGCTGCTTGTCAATTGG 59.933 47.619 5.42 0.00 0.00 3.16
3870 4720 1.337703 GTGTGCTGCTTGTCAATTGGA 59.662 47.619 5.42 0.00 0.00 3.53
3871 4721 2.030371 TGTGCTGCTTGTCAATTGGAA 58.970 42.857 5.42 0.00 0.00 3.53
3876 4726 5.695816 GTGCTGCTTGTCAATTGGAAAATTA 59.304 36.000 5.42 0.00 0.00 1.40
3879 4729 6.815142 GCTGCTTGTCAATTGGAAAATTAGAT 59.185 34.615 5.42 0.00 0.00 1.98
3983 4839 9.516314 GCCTGGTTTAATATTGTGTAAAGATTC 57.484 33.333 0.00 0.00 0.00 2.52
3985 4841 9.221775 CTGGTTTAATATTGTGTAAAGATTCGC 57.778 33.333 0.00 0.00 0.00 4.70
4014 4870 6.165700 AGCCTTGTTTCATGAGACAAAAAT 57.834 33.333 26.36 15.16 35.54 1.82
4027 4883 5.143376 AGACAAAAATCCTTGAGCCAATG 57.857 39.130 0.00 0.00 0.00 2.82
4028 4884 3.667360 ACAAAAATCCTTGAGCCAATGC 58.333 40.909 0.00 0.00 37.95 3.56
4033 4889 4.563140 AATCCTTGAGCCAATGCATTTT 57.437 36.364 9.83 0.00 41.13 1.82
4044 4900 8.093307 TGAGCCAATGCATTTTCATTTAACTTA 58.907 29.630 9.83 0.00 41.13 2.24
4087 4943 2.100252 GCTACACTTACGGATAGCACCA 59.900 50.000 0.00 0.00 39.87 4.17
4088 4944 3.243771 GCTACACTTACGGATAGCACCAT 60.244 47.826 0.00 0.00 39.87 3.55
4089 4945 4.022589 GCTACACTTACGGATAGCACCATA 60.023 45.833 0.00 0.00 39.87 2.74
4091 4947 3.321111 ACACTTACGGATAGCACCATAGG 59.679 47.826 0.00 0.00 0.00 2.57
4092 4948 3.572682 CACTTACGGATAGCACCATAGGA 59.427 47.826 0.00 0.00 0.00 2.94
4093 4949 4.220821 CACTTACGGATAGCACCATAGGAT 59.779 45.833 0.00 0.00 0.00 3.24
4094 4950 4.838986 ACTTACGGATAGCACCATAGGATT 59.161 41.667 0.00 0.00 0.00 3.01
4095 4951 6.014647 ACTTACGGATAGCACCATAGGATTA 58.985 40.000 0.00 0.00 0.00 1.75
4096 4952 6.153000 ACTTACGGATAGCACCATAGGATTAG 59.847 42.308 0.00 0.00 0.00 1.73
4122 4980 2.028020 ACGGACTCTTCTCCCACAAATC 60.028 50.000 0.00 0.00 0.00 2.17
4126 4984 0.391130 TCTTCTCCCACAAATCGGCG 60.391 55.000 0.00 0.00 0.00 6.46
4142 5000 1.001393 GCGTCCCCCTGATTTCCAA 60.001 57.895 0.00 0.00 0.00 3.53
4143 5001 0.395724 GCGTCCCCCTGATTTCCAAT 60.396 55.000 0.00 0.00 0.00 3.16
4144 5002 1.392589 CGTCCCCCTGATTTCCAATG 58.607 55.000 0.00 0.00 0.00 2.82
4145 5003 1.780503 GTCCCCCTGATTTCCAATGG 58.219 55.000 0.00 0.00 0.00 3.16
4146 5004 1.007118 GTCCCCCTGATTTCCAATGGT 59.993 52.381 0.00 0.00 0.00 3.55
4147 5005 1.006998 TCCCCCTGATTTCCAATGGTG 59.993 52.381 0.00 0.00 0.00 4.17
4149 5007 1.488390 CCCTGATTTCCAATGGTGGG 58.512 55.000 0.00 0.00 46.01 4.61
4150 5008 0.826062 CCTGATTTCCAATGGTGGGC 59.174 55.000 0.00 0.00 46.01 5.36
4151 5009 0.826062 CTGATTTCCAATGGTGGGCC 59.174 55.000 0.00 0.00 46.01 5.80
4152 5010 0.617249 TGATTTCCAATGGTGGGCCC 60.617 55.000 17.59 17.59 46.01 5.80
4153 5011 1.306911 ATTTCCAATGGTGGGCCCC 60.307 57.895 22.27 10.91 46.01 5.80
4154 5012 1.825277 ATTTCCAATGGTGGGCCCCT 61.825 55.000 22.27 0.00 46.01 4.79
4155 5013 2.454459 TTTCCAATGGTGGGCCCCTC 62.454 60.000 22.27 12.78 46.01 4.30
4156 5014 3.350163 CCAATGGTGGGCCCCTCT 61.350 66.667 22.27 0.00 41.77 3.69
4157 5015 2.276740 CAATGGTGGGCCCCTCTC 59.723 66.667 22.27 7.09 0.00 3.20
4158 5016 2.128226 AATGGTGGGCCCCTCTCT 59.872 61.111 22.27 0.00 0.00 3.10
4159 5017 2.003548 AATGGTGGGCCCCTCTCTC 61.004 63.158 22.27 2.61 0.00 3.20
4160 5018 2.498820 AATGGTGGGCCCCTCTCTCT 62.499 60.000 22.27 0.00 0.00 3.10
4161 5019 2.285743 GGTGGGCCCCTCTCTCTT 60.286 66.667 22.27 0.00 0.00 2.85
4162 5020 2.371259 GGTGGGCCCCTCTCTCTTC 61.371 68.421 22.27 0.00 0.00 2.87
4163 5021 2.364317 TGGGCCCCTCTCTCTTCG 60.364 66.667 22.27 0.00 0.00 3.79
4164 5022 3.157949 GGGCCCCTCTCTCTTCGG 61.158 72.222 12.23 0.00 0.00 4.30
4165 5023 2.364448 GGCCCCTCTCTCTTCGGT 60.364 66.667 0.00 0.00 0.00 4.69
4166 5024 1.990614 GGCCCCTCTCTCTTCGGTT 60.991 63.158 0.00 0.00 0.00 4.44
4167 5025 1.554583 GGCCCCTCTCTCTTCGGTTT 61.555 60.000 0.00 0.00 0.00 3.27
4168 5026 0.108089 GCCCCTCTCTCTTCGGTTTC 60.108 60.000 0.00 0.00 0.00 2.78
4169 5027 1.562783 CCCCTCTCTCTTCGGTTTCT 58.437 55.000 0.00 0.00 0.00 2.52
4170 5028 2.736347 CCCCTCTCTCTTCGGTTTCTA 58.264 52.381 0.00 0.00 0.00 2.10
4171 5029 3.097614 CCCCTCTCTCTTCGGTTTCTAA 58.902 50.000 0.00 0.00 0.00 2.10
4172 5030 3.707102 CCCCTCTCTCTTCGGTTTCTAAT 59.293 47.826 0.00 0.00 0.00 1.73
4173 5031 4.162509 CCCCTCTCTCTTCGGTTTCTAATT 59.837 45.833 0.00 0.00 0.00 1.40
4174 5032 5.112686 CCCTCTCTCTTCGGTTTCTAATTG 58.887 45.833 0.00 0.00 0.00 2.32
4175 5033 5.337652 CCCTCTCTCTTCGGTTTCTAATTGT 60.338 44.000 0.00 0.00 0.00 2.71
4176 5034 6.166982 CCTCTCTCTTCGGTTTCTAATTGTT 58.833 40.000 0.00 0.00 0.00 2.83
4177 5035 7.321153 CCTCTCTCTTCGGTTTCTAATTGTTA 58.679 38.462 0.00 0.00 0.00 2.41
4178 5036 7.489757 CCTCTCTCTTCGGTTTCTAATTGTTAG 59.510 40.741 0.00 0.00 34.52 2.34
4179 5037 8.118976 TCTCTCTTCGGTTTCTAATTGTTAGA 57.881 34.615 0.00 0.00 40.35 2.10
4180 5038 8.244802 TCTCTCTTCGGTTTCTAATTGTTAGAG 58.755 37.037 0.00 0.00 42.74 2.43
4181 5039 8.118976 TCTCTTCGGTTTCTAATTGTTAGAGA 57.881 34.615 0.00 0.00 42.74 3.10
4182 5040 8.750298 TCTCTTCGGTTTCTAATTGTTAGAGAT 58.250 33.333 0.00 0.00 42.74 2.75
4184 5042 9.798994 TCTTCGGTTTCTAATTGTTAGAGATAC 57.201 33.333 0.36 1.72 42.74 2.24
4185 5043 9.582431 CTTCGGTTTCTAATTGTTAGAGATACA 57.418 33.333 0.36 0.00 42.74 2.29
4222 5080 9.683069 CATGTATTTGATAGTTTAGGATTTGCC 57.317 33.333 0.00 0.00 0.00 4.52
4223 5081 7.925993 TGTATTTGATAGTTTAGGATTTGCCG 58.074 34.615 0.00 0.00 43.43 5.69
4224 5082 7.554835 TGTATTTGATAGTTTAGGATTTGCCGT 59.445 33.333 0.00 0.00 43.43 5.68
4225 5083 6.431198 TTTGATAGTTTAGGATTTGCCGTC 57.569 37.500 0.00 0.00 43.43 4.79
4226 5084 5.353394 TGATAGTTTAGGATTTGCCGTCT 57.647 39.130 0.00 0.00 43.43 4.18
4227 5085 5.357257 TGATAGTTTAGGATTTGCCGTCTC 58.643 41.667 0.00 0.00 43.43 3.36
4228 5086 2.987232 AGTTTAGGATTTGCCGTCTCC 58.013 47.619 0.00 0.00 43.43 3.71
4229 5087 2.572104 AGTTTAGGATTTGCCGTCTCCT 59.428 45.455 0.00 0.00 43.43 3.69
4230 5088 3.009143 AGTTTAGGATTTGCCGTCTCCTT 59.991 43.478 0.00 0.00 43.43 3.36
4231 5089 2.981859 TAGGATTTGCCGTCTCCTTC 57.018 50.000 0.00 0.00 43.43 3.46
4232 5090 0.108138 AGGATTTGCCGTCTCCTTCG 60.108 55.000 0.00 0.00 43.43 3.79
4233 5091 0.391263 GGATTTGCCGTCTCCTTCGT 60.391 55.000 0.00 0.00 0.00 3.85
4234 5092 1.439679 GATTTGCCGTCTCCTTCGTT 58.560 50.000 0.00 0.00 0.00 3.85
4235 5093 2.613691 GATTTGCCGTCTCCTTCGTTA 58.386 47.619 0.00 0.00 0.00 3.18
4236 5094 2.754946 TTTGCCGTCTCCTTCGTTAT 57.245 45.000 0.00 0.00 0.00 1.89
4237 5095 2.288961 TTGCCGTCTCCTTCGTTATC 57.711 50.000 0.00 0.00 0.00 1.75
4238 5096 1.471119 TGCCGTCTCCTTCGTTATCT 58.529 50.000 0.00 0.00 0.00 1.98
4239 5097 1.404391 TGCCGTCTCCTTCGTTATCTC 59.596 52.381 0.00 0.00 0.00 2.75
4240 5098 1.677052 GCCGTCTCCTTCGTTATCTCT 59.323 52.381 0.00 0.00 0.00 3.10
4241 5099 2.877168 GCCGTCTCCTTCGTTATCTCTA 59.123 50.000 0.00 0.00 0.00 2.43
4242 5100 3.058777 GCCGTCTCCTTCGTTATCTCTAG 60.059 52.174 0.00 0.00 0.00 2.43
4243 5101 3.499157 CCGTCTCCTTCGTTATCTCTAGG 59.501 52.174 0.00 0.00 0.00 3.02
4244 5102 4.378774 CGTCTCCTTCGTTATCTCTAGGA 58.621 47.826 0.00 0.00 34.07 2.94
4248 5106 4.975631 TCCTTCGTTATCTCTAGGAGAGG 58.024 47.826 3.73 0.00 42.26 3.69
4249 5107 3.504520 CCTTCGTTATCTCTAGGAGAGGC 59.495 52.174 3.73 0.00 42.26 4.70
4250 5108 2.768698 TCGTTATCTCTAGGAGAGGCG 58.231 52.381 3.73 7.36 42.26 5.52
4251 5109 2.104451 TCGTTATCTCTAGGAGAGGCGT 59.896 50.000 3.73 0.00 42.26 5.68
4252 5110 2.481185 CGTTATCTCTAGGAGAGGCGTC 59.519 54.545 0.00 0.00 42.26 5.19
4253 5111 3.746940 GTTATCTCTAGGAGAGGCGTCT 58.253 50.000 9.04 9.04 42.26 4.18
4254 5112 2.270352 ATCTCTAGGAGAGGCGTCTG 57.730 55.000 14.78 0.00 42.26 3.51
4255 5113 0.181587 TCTCTAGGAGAGGCGTCTGG 59.818 60.000 14.78 1.68 42.54 3.86
4256 5114 1.452145 CTCTAGGAGAGGCGTCTGGC 61.452 65.000 14.78 0.00 38.67 4.85
4265 5123 2.032681 GCGTCTGGCCCTTCAAGT 59.967 61.111 0.00 0.00 34.80 3.16
4266 5124 1.600916 GCGTCTGGCCCTTCAAGTT 60.601 57.895 0.00 0.00 34.80 2.66
4267 5125 1.578206 GCGTCTGGCCCTTCAAGTTC 61.578 60.000 0.00 0.00 34.80 3.01
4268 5126 0.250295 CGTCTGGCCCTTCAAGTTCA 60.250 55.000 0.00 0.00 0.00 3.18
4269 5127 1.611673 CGTCTGGCCCTTCAAGTTCAT 60.612 52.381 0.00 0.00 0.00 2.57
4270 5128 2.354704 CGTCTGGCCCTTCAAGTTCATA 60.355 50.000 0.00 0.00 0.00 2.15
4271 5129 3.010420 GTCTGGCCCTTCAAGTTCATAC 58.990 50.000 0.00 0.00 0.00 2.39
4272 5130 2.912956 TCTGGCCCTTCAAGTTCATACT 59.087 45.455 0.00 0.00 35.68 2.12
4273 5131 3.055094 TCTGGCCCTTCAAGTTCATACTC 60.055 47.826 0.00 0.00 31.99 2.59
4274 5132 2.026262 TGGCCCTTCAAGTTCATACTCC 60.026 50.000 0.00 0.00 31.99 3.85
4275 5133 2.239907 GGCCCTTCAAGTTCATACTCCT 59.760 50.000 0.00 0.00 31.99 3.69
4276 5134 3.454812 GGCCCTTCAAGTTCATACTCCTA 59.545 47.826 0.00 0.00 31.99 2.94
4277 5135 4.103311 GGCCCTTCAAGTTCATACTCCTAT 59.897 45.833 0.00 0.00 31.99 2.57
4278 5136 5.307196 GGCCCTTCAAGTTCATACTCCTATA 59.693 44.000 0.00 0.00 31.99 1.31
4279 5137 6.013293 GGCCCTTCAAGTTCATACTCCTATAT 60.013 42.308 0.00 0.00 31.99 0.86
4280 5138 7.180408 GGCCCTTCAAGTTCATACTCCTATATA 59.820 40.741 0.00 0.00 31.99 0.86
4281 5139 8.763601 GCCCTTCAAGTTCATACTCCTATATAT 58.236 37.037 0.00 0.00 31.99 0.86
4289 5147 9.835389 AGTTCATACTCCTATATATACTCGTCC 57.165 37.037 0.00 0.00 0.00 4.79
4290 5148 8.763356 GTTCATACTCCTATATATACTCGTCCG 58.237 40.741 0.00 0.00 0.00 4.79
4291 5149 8.016301 TCATACTCCTATATATACTCGTCCGT 57.984 38.462 0.00 0.00 0.00 4.69
4292 5150 7.924947 TCATACTCCTATATATACTCGTCCGTG 59.075 40.741 0.00 0.00 0.00 4.94
4293 5151 6.291648 ACTCCTATATATACTCGTCCGTGA 57.708 41.667 0.00 0.00 0.00 4.35
4294 5152 6.339730 ACTCCTATATATACTCGTCCGTGAG 58.660 44.000 0.00 0.00 41.86 3.51
4311 5169 5.621197 CGTGAGGTTCAATACAAAATCCA 57.379 39.130 0.00 0.00 0.00 3.41
4312 5170 6.007936 CGTGAGGTTCAATACAAAATCCAA 57.992 37.500 0.00 0.00 0.00 3.53
4313 5171 6.620678 CGTGAGGTTCAATACAAAATCCAAT 58.379 36.000 0.00 0.00 0.00 3.16
4314 5172 6.527722 CGTGAGGTTCAATACAAAATCCAATG 59.472 38.462 0.00 0.00 0.00 2.82
4315 5173 6.311200 GTGAGGTTCAATACAAAATCCAATGC 59.689 38.462 0.00 0.00 0.00 3.56
4316 5174 6.014755 TGAGGTTCAATACAAAATCCAATGCA 60.015 34.615 0.00 0.00 0.00 3.96
4317 5175 6.949715 AGGTTCAATACAAAATCCAATGCAT 58.050 32.000 0.00 0.00 0.00 3.96
4318 5176 7.396418 AGGTTCAATACAAAATCCAATGCATT 58.604 30.769 5.99 5.99 0.00 3.56
4319 5177 8.538701 AGGTTCAATACAAAATCCAATGCATTA 58.461 29.630 12.53 0.00 0.00 1.90
4320 5178 8.603181 GGTTCAATACAAAATCCAATGCATTAC 58.397 33.333 12.53 0.47 0.00 1.89
4321 5179 7.984002 TCAATACAAAATCCAATGCATTACG 57.016 32.000 12.53 5.48 0.00 3.18
4322 5180 6.475076 TCAATACAAAATCCAATGCATTACGC 59.525 34.615 12.53 0.00 42.89 4.42
4323 5181 3.520569 ACAAAATCCAATGCATTACGCC 58.479 40.909 12.53 0.00 41.33 5.68
4324 5182 3.056250 ACAAAATCCAATGCATTACGCCA 60.056 39.130 12.53 0.00 41.33 5.69
4325 5183 3.883830 AAATCCAATGCATTACGCCAA 57.116 38.095 12.53 0.00 41.33 4.52
4326 5184 4.405116 AAATCCAATGCATTACGCCAAT 57.595 36.364 12.53 0.00 41.33 3.16
4327 5185 3.648339 ATCCAATGCATTACGCCAATC 57.352 42.857 12.53 0.00 41.33 2.67
4328 5186 1.680735 TCCAATGCATTACGCCAATCC 59.319 47.619 12.53 0.00 41.33 3.01
4329 5187 1.682854 CCAATGCATTACGCCAATCCT 59.317 47.619 12.53 0.00 41.33 3.24
4330 5188 2.101249 CCAATGCATTACGCCAATCCTT 59.899 45.455 12.53 0.00 41.33 3.36
4331 5189 3.430651 CCAATGCATTACGCCAATCCTTT 60.431 43.478 12.53 0.00 41.33 3.11
4332 5190 3.715628 ATGCATTACGCCAATCCTTTC 57.284 42.857 0.00 0.00 41.33 2.62
4333 5191 1.748493 TGCATTACGCCAATCCTTTCC 59.252 47.619 0.00 0.00 41.33 3.13
4334 5192 1.067060 GCATTACGCCAATCCTTTCCC 59.933 52.381 0.00 0.00 32.94 3.97
4335 5193 2.654863 CATTACGCCAATCCTTTCCCT 58.345 47.619 0.00 0.00 0.00 4.20
4336 5194 2.413310 TTACGCCAATCCTTTCCCTC 57.587 50.000 0.00 0.00 0.00 4.30
4337 5195 1.580059 TACGCCAATCCTTTCCCTCT 58.420 50.000 0.00 0.00 0.00 3.69
4338 5196 1.580059 ACGCCAATCCTTTCCCTCTA 58.420 50.000 0.00 0.00 0.00 2.43
4339 5197 2.127708 ACGCCAATCCTTTCCCTCTAT 58.872 47.619 0.00 0.00 0.00 1.98
4340 5198 2.104963 ACGCCAATCCTTTCCCTCTATC 59.895 50.000 0.00 0.00 0.00 2.08
4341 5199 2.370189 CGCCAATCCTTTCCCTCTATCT 59.630 50.000 0.00 0.00 0.00 1.98
4342 5200 3.556004 CGCCAATCCTTTCCCTCTATCTC 60.556 52.174 0.00 0.00 0.00 2.75
4343 5201 3.650461 GCCAATCCTTTCCCTCTATCTCT 59.350 47.826 0.00 0.00 0.00 3.10
4344 5202 4.103943 GCCAATCCTTTCCCTCTATCTCTT 59.896 45.833 0.00 0.00 0.00 2.85
4345 5203 5.744594 GCCAATCCTTTCCCTCTATCTCTTC 60.745 48.000 0.00 0.00 0.00 2.87
4346 5204 5.606329 CCAATCCTTTCCCTCTATCTCTTCT 59.394 44.000 0.00 0.00 0.00 2.85
4347 5205 6.784969 CCAATCCTTTCCCTCTATCTCTTCTA 59.215 42.308 0.00 0.00 0.00 2.10
4348 5206 7.291182 CCAATCCTTTCCCTCTATCTCTTCTAA 59.709 40.741 0.00 0.00 0.00 2.10
4349 5207 8.879227 CAATCCTTTCCCTCTATCTCTTCTAAT 58.121 37.037 0.00 0.00 0.00 1.73
4352 5210 9.540538 TCCTTTCCCTCTATCTCTTCTAATATG 57.459 37.037 0.00 0.00 0.00 1.78
4353 5211 9.540538 CCTTTCCCTCTATCTCTTCTAATATGA 57.459 37.037 0.00 0.00 0.00 2.15
4367 5225 9.775539 TCTTCTAATATGATATCAGCCTAACCT 57.224 33.333 11.78 0.00 0.00 3.50
4372 5230 8.860517 AATATGATATCAGCCTAACCTATCCA 57.139 34.615 11.78 0.00 0.00 3.41
4373 5231 8.860517 ATATGATATCAGCCTAACCTATCCAA 57.139 34.615 11.78 0.00 0.00 3.53
4374 5232 7.574021 ATGATATCAGCCTAACCTATCCAAA 57.426 36.000 11.78 0.00 0.00 3.28
4375 5233 6.769512 TGATATCAGCCTAACCTATCCAAAC 58.230 40.000 0.00 0.00 0.00 2.93
4376 5234 3.926058 TCAGCCTAACCTATCCAAACC 57.074 47.619 0.00 0.00 0.00 3.27
4377 5235 3.186283 TCAGCCTAACCTATCCAAACCA 58.814 45.455 0.00 0.00 0.00 3.67
4378 5236 3.785887 TCAGCCTAACCTATCCAAACCAT 59.214 43.478 0.00 0.00 0.00 3.55
4379 5237 4.972568 TCAGCCTAACCTATCCAAACCATA 59.027 41.667 0.00 0.00 0.00 2.74
4380 5238 5.071788 TCAGCCTAACCTATCCAAACCATAG 59.928 44.000 0.00 0.00 0.00 2.23
4381 5239 4.072839 GCCTAACCTATCCAAACCATAGC 58.927 47.826 0.00 0.00 0.00 2.97
4382 5240 4.652822 CCTAACCTATCCAAACCATAGCC 58.347 47.826 0.00 0.00 0.00 3.93
4383 5241 2.930826 ACCTATCCAAACCATAGCCG 57.069 50.000 0.00 0.00 0.00 5.52
4384 5242 2.124411 ACCTATCCAAACCATAGCCGT 58.876 47.619 0.00 0.00 0.00 5.68
4385 5243 3.311091 ACCTATCCAAACCATAGCCGTA 58.689 45.455 0.00 0.00 0.00 4.02
4386 5244 3.712733 ACCTATCCAAACCATAGCCGTAA 59.287 43.478 0.00 0.00 0.00 3.18
4387 5245 4.062991 CCTATCCAAACCATAGCCGTAAC 58.937 47.826 0.00 0.00 0.00 2.50
4388 5246 3.637911 ATCCAAACCATAGCCGTAACA 57.362 42.857 0.00 0.00 0.00 2.41
4389 5247 2.980568 TCCAAACCATAGCCGTAACAG 58.019 47.619 0.00 0.00 0.00 3.16
4390 5248 2.014128 CCAAACCATAGCCGTAACAGG 58.986 52.381 0.00 0.00 0.00 4.00
4391 5249 2.014128 CAAACCATAGCCGTAACAGGG 58.986 52.381 0.00 0.00 0.00 4.45
4392 5250 1.575419 AACCATAGCCGTAACAGGGA 58.425 50.000 0.00 0.00 0.00 4.20
4393 5251 1.575419 ACCATAGCCGTAACAGGGAA 58.425 50.000 0.00 0.00 0.00 3.97
4394 5252 1.910671 ACCATAGCCGTAACAGGGAAA 59.089 47.619 0.00 0.00 0.00 3.13
4395 5253 2.306512 ACCATAGCCGTAACAGGGAAAA 59.693 45.455 0.00 0.00 0.00 2.29
4396 5254 3.053917 ACCATAGCCGTAACAGGGAAAAT 60.054 43.478 0.00 0.00 0.00 1.82
4397 5255 4.164604 ACCATAGCCGTAACAGGGAAAATA 59.835 41.667 0.00 0.00 0.00 1.40
4398 5256 5.163131 ACCATAGCCGTAACAGGGAAAATAT 60.163 40.000 0.00 0.00 0.00 1.28
4399 5257 5.768164 CCATAGCCGTAACAGGGAAAATATT 59.232 40.000 0.00 0.00 0.00 1.28
4400 5258 6.938030 CCATAGCCGTAACAGGGAAAATATTA 59.062 38.462 0.00 0.00 0.00 0.98
4401 5259 7.446013 CCATAGCCGTAACAGGGAAAATATTAA 59.554 37.037 0.00 0.00 0.00 1.40
4402 5260 8.842280 CATAGCCGTAACAGGGAAAATATTAAA 58.158 33.333 0.00 0.00 0.00 1.52
4403 5261 7.891498 AGCCGTAACAGGGAAAATATTAAAT 57.109 32.000 0.00 0.00 0.00 1.40
4404 5262 8.301252 AGCCGTAACAGGGAAAATATTAAATT 57.699 30.769 0.00 0.00 0.00 1.82
4405 5263 8.755028 AGCCGTAACAGGGAAAATATTAAATTT 58.245 29.630 0.00 0.00 0.00 1.82
4423 5281 9.939802 ATTAAATTTACCTAAAGTCTGACTCGT 57.060 29.630 11.31 7.72 0.00 4.18
4424 5282 7.653767 AAATTTACCTAAAGTCTGACTCGTG 57.346 36.000 11.31 4.11 0.00 4.35
4425 5283 2.726832 ACCTAAAGTCTGACTCGTGC 57.273 50.000 11.31 0.00 0.00 5.34
4426 5284 1.961394 ACCTAAAGTCTGACTCGTGCA 59.039 47.619 11.31 0.00 0.00 4.57
4427 5285 2.029828 ACCTAAAGTCTGACTCGTGCAG 60.030 50.000 11.31 4.32 34.71 4.41
4428 5286 1.989165 CTAAAGTCTGACTCGTGCAGC 59.011 52.381 11.31 0.00 33.45 5.25
4429 5287 0.390860 AAAGTCTGACTCGTGCAGCT 59.609 50.000 11.31 0.00 33.45 4.24
4430 5288 0.319383 AAGTCTGACTCGTGCAGCTG 60.319 55.000 11.31 10.11 33.45 4.24
4431 5289 2.048784 TCTGACTCGTGCAGCTGC 60.049 61.111 31.89 31.89 42.50 5.25
4432 5290 3.476646 CTGACTCGTGCAGCTGCG 61.477 66.667 32.11 20.61 45.83 5.18
4442 5300 3.406361 CAGCTGCGCTCGTTCGTT 61.406 61.111 9.73 0.00 36.40 3.85
4443 5301 3.406361 AGCTGCGCTCGTTCGTTG 61.406 61.111 9.73 0.00 30.62 4.10
4444 5302 3.403057 GCTGCGCTCGTTCGTTGA 61.403 61.111 9.73 0.00 0.00 3.18
4445 5303 2.465920 CTGCGCTCGTTCGTTGAC 59.534 61.111 9.73 0.00 0.00 3.18
4446 5304 2.278923 TGCGCTCGTTCGTTGACA 60.279 55.556 9.73 0.00 0.00 3.58
4447 5305 2.167918 GCGCTCGTTCGTTGACAC 59.832 61.111 0.00 0.00 0.00 3.67
4457 5315 4.349871 GTTGACACGACCGCACGC 62.350 66.667 0.00 0.00 36.70 5.34
4458 5316 4.874977 TTGACACGACCGCACGCA 62.875 61.111 0.00 0.00 36.70 5.24
4469 5327 4.395583 GCACGCACTGCAGCCTTC 62.396 66.667 15.27 0.00 46.29 3.46
4470 5328 2.667536 CACGCACTGCAGCCTTCT 60.668 61.111 15.27 0.00 0.00 2.85
4471 5329 2.667536 ACGCACTGCAGCCTTCTG 60.668 61.111 15.27 5.14 43.16 3.02
4472 5330 2.357881 CGCACTGCAGCCTTCTGA 60.358 61.111 15.27 0.00 42.95 3.27
4473 5331 1.744368 CGCACTGCAGCCTTCTGAT 60.744 57.895 15.27 0.00 42.95 2.90
4474 5332 1.801332 GCACTGCAGCCTTCTGATG 59.199 57.895 15.27 2.68 42.95 3.07
4475 5333 1.801332 CACTGCAGCCTTCTGATGC 59.199 57.895 15.27 0.00 42.95 3.91
4477 5335 4.313819 TGCAGCCTTCTGATGCAG 57.686 55.556 0.38 0.00 44.56 4.41
4478 5336 2.044555 TGCAGCCTTCTGATGCAGC 61.045 57.895 0.38 0.00 44.56 5.25
4479 5337 3.099438 CAGCCTTCTGATGCAGCG 58.901 61.111 0.00 0.00 42.95 5.18
4480 5338 1.744368 CAGCCTTCTGATGCAGCGT 60.744 57.895 0.00 0.00 42.95 5.07
4481 5339 1.744368 AGCCTTCTGATGCAGCGTG 60.744 57.895 0.00 0.00 0.00 5.34
4482 5340 2.758089 GCCTTCTGATGCAGCGTGG 61.758 63.158 0.00 0.00 0.00 4.94
4483 5341 2.758089 CCTTCTGATGCAGCGTGGC 61.758 63.158 0.00 0.00 0.00 5.01
4484 5342 3.092192 CTTCTGATGCAGCGTGGCG 62.092 63.158 0.00 0.00 36.28 5.69
4485 5343 3.588057 TTCTGATGCAGCGTGGCGA 62.588 57.895 0.00 0.00 36.28 5.54
4486 5344 2.857575 TTCTGATGCAGCGTGGCGAT 62.858 55.000 0.00 0.00 36.28 4.58
4487 5345 2.879070 CTGATGCAGCGTGGCGATC 61.879 63.158 0.00 0.00 36.28 3.69
4488 5346 2.587194 GATGCAGCGTGGCGATCT 60.587 61.111 0.00 0.00 36.28 2.75
4489 5347 2.587194 ATGCAGCGTGGCGATCTC 60.587 61.111 0.00 0.00 36.28 2.75
4490 5348 4.819761 TGCAGCGTGGCGATCTCC 62.820 66.667 0.00 0.00 36.28 3.71
4492 5350 3.842923 CAGCGTGGCGATCTCCCT 61.843 66.667 0.00 0.00 0.00 4.20
4493 5351 3.842923 AGCGTGGCGATCTCCCTG 61.843 66.667 0.00 0.00 0.00 4.45
4524 5382 3.697747 CCGACCAGGTGCCCGTTA 61.698 66.667 0.00 0.00 34.51 3.18
4525 5383 2.433664 CGACCAGGTGCCCGTTAC 60.434 66.667 0.00 0.00 0.00 2.50
4526 5384 2.433664 GACCAGGTGCCCGTTACG 60.434 66.667 0.00 0.00 0.00 3.18
4573 5431 4.573210 GGCCCGACCCTTTATTCC 57.427 61.111 0.00 0.00 0.00 3.01
4574 5432 1.610873 GGCCCGACCCTTTATTCCA 59.389 57.895 0.00 0.00 0.00 3.53
4575 5433 0.465642 GGCCCGACCCTTTATTCCAG 60.466 60.000 0.00 0.00 0.00 3.86
4576 5434 0.465642 GCCCGACCCTTTATTCCAGG 60.466 60.000 0.00 0.00 0.00 4.45
4577 5435 0.465642 CCCGACCCTTTATTCCAGGC 60.466 60.000 0.00 0.00 0.00 4.85
4578 5436 0.814010 CCGACCCTTTATTCCAGGCG 60.814 60.000 0.00 0.00 0.00 5.52
4579 5437 0.177141 CGACCCTTTATTCCAGGCGA 59.823 55.000 0.00 0.00 0.00 5.54
4580 5438 1.406341 CGACCCTTTATTCCAGGCGAA 60.406 52.381 0.00 0.00 34.14 4.70
4581 5439 2.718563 GACCCTTTATTCCAGGCGAAA 58.281 47.619 0.00 0.00 33.08 3.46
4582 5440 3.086282 GACCCTTTATTCCAGGCGAAAA 58.914 45.455 0.00 0.00 33.08 2.29
4583 5441 2.823747 ACCCTTTATTCCAGGCGAAAAC 59.176 45.455 0.00 0.00 33.08 2.43
4584 5442 3.089284 CCCTTTATTCCAGGCGAAAACT 58.911 45.455 0.00 0.00 33.08 2.66
4585 5443 3.119495 CCCTTTATTCCAGGCGAAAACTG 60.119 47.826 0.00 0.00 33.08 3.16
4586 5444 3.501950 CTTTATTCCAGGCGAAAACTGC 58.498 45.455 0.00 0.00 34.65 4.40
4593 5451 3.747976 GCGAAAACTGCCCCGCAT 61.748 61.111 0.00 0.00 46.04 4.73
4594 5452 2.485122 CGAAAACTGCCCCGCATC 59.515 61.111 0.00 0.00 38.13 3.91
4595 5453 2.885113 GAAAACTGCCCCGCATCC 59.115 61.111 0.00 0.00 38.13 3.51
4596 5454 2.679996 AAAACTGCCCCGCATCCC 60.680 61.111 0.00 0.00 38.13 3.85
4597 5455 4.759205 AAACTGCCCCGCATCCCC 62.759 66.667 0.00 0.00 38.13 4.81
4608 5466 4.528674 CATCCCCTGCTCGTCTTG 57.471 61.111 0.00 0.00 0.00 3.02
4609 5467 1.599047 CATCCCCTGCTCGTCTTGT 59.401 57.895 0.00 0.00 0.00 3.16
4610 5468 0.036010 CATCCCCTGCTCGTCTTGTT 60.036 55.000 0.00 0.00 0.00 2.83
4611 5469 0.250513 ATCCCCTGCTCGTCTTGTTC 59.749 55.000 0.00 0.00 0.00 3.18
4612 5470 1.738099 CCCCTGCTCGTCTTGTTCG 60.738 63.158 0.00 0.00 0.00 3.95
4613 5471 1.289066 CCCTGCTCGTCTTGTTCGA 59.711 57.895 0.00 0.00 35.96 3.71
4614 5472 0.319555 CCCTGCTCGTCTTGTTCGAA 60.320 55.000 0.00 0.00 36.89 3.71
4615 5473 1.497991 CCTGCTCGTCTTGTTCGAAA 58.502 50.000 0.00 0.00 36.89 3.46
4616 5474 1.192534 CCTGCTCGTCTTGTTCGAAAC 59.807 52.381 0.00 0.00 36.89 2.78
4617 5475 1.192534 CTGCTCGTCTTGTTCGAAACC 59.807 52.381 0.00 0.00 36.89 3.27
4618 5476 0.161024 GCTCGTCTTGTTCGAAACCG 59.839 55.000 0.00 0.00 36.89 4.44
4619 5477 0.161024 CTCGTCTTGTTCGAAACCGC 59.839 55.000 0.00 0.00 36.89 5.68
4620 5478 1.203313 CGTCTTGTTCGAAACCGCC 59.797 57.895 0.00 0.00 0.00 6.13
4621 5479 1.572941 GTCTTGTTCGAAACCGCCC 59.427 57.895 0.00 0.00 0.00 6.13
4622 5480 1.957186 TCTTGTTCGAAACCGCCCG 60.957 57.895 0.00 0.00 0.00 6.13
4623 5481 3.588891 CTTGTTCGAAACCGCCCGC 62.589 63.158 0.00 0.00 0.00 6.13
4640 5498 3.508840 CCCGCACCCGCAGATTTC 61.509 66.667 0.00 0.00 38.40 2.17
4641 5499 2.745884 CCGCACCCGCAGATTTCA 60.746 61.111 0.00 0.00 38.40 2.69
4642 5500 2.114670 CCGCACCCGCAGATTTCAT 61.115 57.895 0.00 0.00 38.40 2.57
4643 5501 1.656818 CCGCACCCGCAGATTTCATT 61.657 55.000 0.00 0.00 38.40 2.57
4644 5502 0.248215 CGCACCCGCAGATTTCATTC 60.248 55.000 0.00 0.00 38.40 2.67
4645 5503 0.248215 GCACCCGCAGATTTCATTCG 60.248 55.000 0.00 0.00 38.36 3.34
4646 5504 1.368641 CACCCGCAGATTTCATTCGA 58.631 50.000 0.00 0.00 0.00 3.71
4647 5505 1.737236 CACCCGCAGATTTCATTCGAA 59.263 47.619 0.00 0.00 0.00 3.71
4648 5506 1.737793 ACCCGCAGATTTCATTCGAAC 59.262 47.619 0.00 0.00 0.00 3.95
4649 5507 2.009774 CCCGCAGATTTCATTCGAACT 58.990 47.619 0.00 0.00 0.00 3.01
4650 5508 2.030946 CCCGCAGATTTCATTCGAACTC 59.969 50.000 0.00 0.00 32.42 3.01
4651 5509 2.285256 CCGCAGATTTCATTCGAACTCG 60.285 50.000 0.00 0.00 36.27 4.18
4652 5510 2.345641 CGCAGATTTCATTCGAACTCGT 59.654 45.455 0.00 0.00 36.27 4.18
4653 5511 3.540359 CGCAGATTTCATTCGAACTCGTC 60.540 47.826 0.00 0.00 36.27 4.20
4654 5512 3.614616 GCAGATTTCATTCGAACTCGTCT 59.385 43.478 0.00 0.00 36.27 4.18
4655 5513 4.259610 GCAGATTTCATTCGAACTCGTCTC 60.260 45.833 0.00 0.00 36.27 3.36
4656 5514 4.266502 CAGATTTCATTCGAACTCGTCTCC 59.733 45.833 0.00 0.00 36.27 3.71
4657 5515 2.649331 TTCATTCGAACTCGTCTCCC 57.351 50.000 0.00 0.00 40.80 4.30
4658 5516 1.835494 TCATTCGAACTCGTCTCCCT 58.165 50.000 0.00 0.00 40.80 4.20
4659 5517 1.743958 TCATTCGAACTCGTCTCCCTC 59.256 52.381 0.00 0.00 40.80 4.30
4660 5518 1.104630 ATTCGAACTCGTCTCCCTCC 58.895 55.000 0.00 0.00 40.80 4.30
4661 5519 0.964358 TTCGAACTCGTCTCCCTCCC 60.964 60.000 0.00 0.00 40.80 4.30
4662 5520 2.416432 CGAACTCGTCTCCCTCCCC 61.416 68.421 0.00 0.00 34.11 4.81
4663 5521 2.039137 AACTCGTCTCCCTCCCCC 59.961 66.667 0.00 0.00 0.00 5.40
4664 5522 2.517582 GAACTCGTCTCCCTCCCCCT 62.518 65.000 0.00 0.00 0.00 4.79
4665 5523 2.108208 AACTCGTCTCCCTCCCCCTT 62.108 60.000 0.00 0.00 0.00 3.95
4666 5524 1.758906 CTCGTCTCCCTCCCCCTTC 60.759 68.421 0.00 0.00 0.00 3.46
4667 5525 2.764547 CGTCTCCCTCCCCCTTCC 60.765 72.222 0.00 0.00 0.00 3.46
4668 5526 2.788589 GTCTCCCTCCCCCTTCCT 59.211 66.667 0.00 0.00 0.00 3.36
4669 5527 1.383386 GTCTCCCTCCCCCTTCCTC 60.383 68.421 0.00 0.00 0.00 3.71
4670 5528 1.550374 TCTCCCTCCCCCTTCCTCT 60.550 63.158 0.00 0.00 0.00 3.69
4671 5529 1.074850 CTCCCTCCCCCTTCCTCTC 60.075 68.421 0.00 0.00 0.00 3.20
4672 5530 2.040359 CCCTCCCCCTTCCTCTCC 60.040 72.222 0.00 0.00 0.00 3.71
4673 5531 2.652113 CCCTCCCCCTTCCTCTCCT 61.652 68.421 0.00 0.00 0.00 3.69
4674 5532 1.074850 CCTCCCCCTTCCTCTCCTC 60.075 68.421 0.00 0.00 0.00 3.71
4675 5533 1.598856 CCTCCCCCTTCCTCTCCTCT 61.599 65.000 0.00 0.00 0.00 3.69
4676 5534 1.236708 CTCCCCCTTCCTCTCCTCTA 58.763 60.000 0.00 0.00 0.00 2.43
4677 5535 1.146982 CTCCCCCTTCCTCTCCTCTAG 59.853 61.905 0.00 0.00 0.00 2.43
4678 5536 0.471022 CCCCCTTCCTCTCCTCTAGC 60.471 65.000 0.00 0.00 0.00 3.42
4679 5537 0.263172 CCCCTTCCTCTCCTCTAGCA 59.737 60.000 0.00 0.00 0.00 3.49
4680 5538 1.343478 CCCCTTCCTCTCCTCTAGCAA 60.343 57.143 0.00 0.00 0.00 3.91
4681 5539 1.760029 CCCTTCCTCTCCTCTAGCAAC 59.240 57.143 0.00 0.00 0.00 4.17
4682 5540 1.407258 CCTTCCTCTCCTCTAGCAACG 59.593 57.143 0.00 0.00 0.00 4.10
4683 5541 1.407258 CTTCCTCTCCTCTAGCAACGG 59.593 57.143 0.00 0.00 0.00 4.44
4684 5542 1.038130 TCCTCTCCTCTAGCAACGGC 61.038 60.000 0.00 0.00 41.61 5.68
4714 5572 4.722700 GGTGCTGCGGTGGTGGAT 62.723 66.667 0.00 0.00 0.00 3.41
4715 5573 3.127533 GTGCTGCGGTGGTGGATC 61.128 66.667 0.00 0.00 0.00 3.36
4716 5574 4.408821 TGCTGCGGTGGTGGATCC 62.409 66.667 4.20 4.20 0.00 3.36
4718 5576 4.838152 CTGCGGTGGTGGATCCGG 62.838 72.222 7.39 0.00 45.85 5.14
4775 5633 4.504916 CGAGTCTCCGGCTGCAGG 62.505 72.222 17.12 12.93 0.00 4.85
4776 5634 4.828925 GAGTCTCCGGCTGCAGGC 62.829 72.222 29.31 29.31 40.90 4.85
4784 5642 4.096003 GGCTGCAGGCGGAGGTAA 62.096 66.667 25.69 0.00 42.94 2.85
4785 5643 2.046314 GCTGCAGGCGGAGGTAAA 60.046 61.111 17.12 0.00 0.00 2.01
4786 5644 2.399356 GCTGCAGGCGGAGGTAAAC 61.399 63.158 17.12 0.00 0.00 2.01
4787 5645 1.745489 CTGCAGGCGGAGGTAAACC 60.745 63.158 5.57 0.00 0.00 3.27
4799 5657 3.538634 AGGTAAACCTCGCACCTATTC 57.461 47.619 0.00 0.00 44.77 1.75
4800 5658 2.169978 AGGTAAACCTCGCACCTATTCC 59.830 50.000 0.00 0.00 44.77 3.01
4801 5659 2.558378 GTAAACCTCGCACCTATTCCC 58.442 52.381 0.00 0.00 0.00 3.97
4802 5660 1.286248 AAACCTCGCACCTATTCCCT 58.714 50.000 0.00 0.00 0.00 4.20
4803 5661 0.831307 AACCTCGCACCTATTCCCTC 59.169 55.000 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 6.084277 GTGTCTTCAAAGTTCAAACTCGTTT 58.916 36.000 0.00 0.00 38.57 3.60
15 16 5.391629 GGTGTCTTCAAAGTTCAAACTCGTT 60.392 40.000 0.00 0.00 38.57 3.85
16 17 4.094442 GGTGTCTTCAAAGTTCAAACTCGT 59.906 41.667 0.00 0.00 38.57 4.18
17 18 4.588278 GGTGTCTTCAAAGTTCAAACTCG 58.412 43.478 0.00 0.00 38.57 4.18
18 19 4.331717 TCGGTGTCTTCAAAGTTCAAACTC 59.668 41.667 0.00 0.00 38.57 3.01
19 20 4.094442 GTCGGTGTCTTCAAAGTTCAAACT 59.906 41.667 0.00 0.00 42.04 2.66
20 21 4.340263 GTCGGTGTCTTCAAAGTTCAAAC 58.660 43.478 0.00 0.00 0.00 2.93
21 22 3.062909 CGTCGGTGTCTTCAAAGTTCAAA 59.937 43.478 0.00 0.00 0.00 2.69
22 23 2.605818 CGTCGGTGTCTTCAAAGTTCAA 59.394 45.455 0.00 0.00 0.00 2.69
23 24 2.159212 TCGTCGGTGTCTTCAAAGTTCA 60.159 45.455 0.00 0.00 0.00 3.18
24 25 2.466846 TCGTCGGTGTCTTCAAAGTTC 58.533 47.619 0.00 0.00 0.00 3.01
25 26 2.470821 CTCGTCGGTGTCTTCAAAGTT 58.529 47.619 0.00 0.00 0.00 2.66
26 27 1.868519 GCTCGTCGGTGTCTTCAAAGT 60.869 52.381 0.00 0.00 0.00 2.66
27 28 0.784778 GCTCGTCGGTGTCTTCAAAG 59.215 55.000 0.00 0.00 0.00 2.77
28 29 0.599204 GGCTCGTCGGTGTCTTCAAA 60.599 55.000 0.00 0.00 0.00 2.69
29 30 1.006571 GGCTCGTCGGTGTCTTCAA 60.007 57.895 0.00 0.00 0.00 2.69
30 31 2.649034 GGCTCGTCGGTGTCTTCA 59.351 61.111 0.00 0.00 0.00 3.02
31 32 2.126031 GGGCTCGTCGGTGTCTTC 60.126 66.667 0.00 0.00 0.00 2.87
32 33 2.915659 TGGGCTCGTCGGTGTCTT 60.916 61.111 0.00 0.00 0.00 3.01
33 34 2.759641 TAGTGGGCTCGTCGGTGTCT 62.760 60.000 0.00 0.00 0.00 3.41
34 35 1.870055 TTAGTGGGCTCGTCGGTGTC 61.870 60.000 0.00 0.00 0.00 3.67
35 36 1.466025 TTTAGTGGGCTCGTCGGTGT 61.466 55.000 0.00 0.00 0.00 4.16
36 37 1.012486 GTTTAGTGGGCTCGTCGGTG 61.012 60.000 0.00 0.00 0.00 4.94
37 38 1.291272 GTTTAGTGGGCTCGTCGGT 59.709 57.895 0.00 0.00 0.00 4.69
38 39 1.447314 GGTTTAGTGGGCTCGTCGG 60.447 63.158 0.00 0.00 0.00 4.79
39 40 1.447314 GGGTTTAGTGGGCTCGTCG 60.447 63.158 0.00 0.00 0.00 5.12
40 41 0.391263 CTGGGTTTAGTGGGCTCGTC 60.391 60.000 0.00 0.00 0.00 4.20
41 42 1.677552 CTGGGTTTAGTGGGCTCGT 59.322 57.895 0.00 0.00 0.00 4.18
42 43 1.745489 GCTGGGTTTAGTGGGCTCG 60.745 63.158 0.00 0.00 0.00 5.03
43 44 1.378646 GGCTGGGTTTAGTGGGCTC 60.379 63.158 0.00 0.00 0.00 4.70
44 45 2.763902 GGCTGGGTTTAGTGGGCT 59.236 61.111 0.00 0.00 0.00 5.19
45 46 2.750237 CGGCTGGGTTTAGTGGGC 60.750 66.667 0.00 0.00 0.00 5.36
46 47 2.045340 CCGGCTGGGTTTAGTGGG 60.045 66.667 2.57 0.00 0.00 4.61
47 48 1.078426 CTCCGGCTGGGTTTAGTGG 60.078 63.158 12.87 0.00 37.00 4.00
48 49 1.078426 CCTCCGGCTGGGTTTAGTG 60.078 63.158 12.87 0.00 37.00 2.74
49 50 0.838987 TTCCTCCGGCTGGGTTTAGT 60.839 55.000 12.87 0.00 37.00 2.24
50 51 0.546598 ATTCCTCCGGCTGGGTTTAG 59.453 55.000 12.87 0.71 37.00 1.85
51 52 0.254747 CATTCCTCCGGCTGGGTTTA 59.745 55.000 12.87 0.00 37.00 2.01
52 53 1.000896 CATTCCTCCGGCTGGGTTT 60.001 57.895 12.87 0.00 37.00 3.27
53 54 2.677228 CATTCCTCCGGCTGGGTT 59.323 61.111 12.87 0.00 37.00 4.11
54 55 4.115199 GCATTCCTCCGGCTGGGT 62.115 66.667 12.87 1.13 37.00 4.51
55 56 4.113815 TGCATTCCTCCGGCTGGG 62.114 66.667 12.87 2.03 35.24 4.45
56 57 2.515523 CTGCATTCCTCCGGCTGG 60.516 66.667 4.71 4.71 0.00 4.85
57 58 2.515523 CCTGCATTCCTCCGGCTG 60.516 66.667 0.00 0.00 0.00 4.85
58 59 3.801997 CCCTGCATTCCTCCGGCT 61.802 66.667 0.00 0.00 0.00 5.52
59 60 3.797353 TCCCTGCATTCCTCCGGC 61.797 66.667 0.00 0.00 0.00 6.13
245 248 7.865385 AGCAGTGAAGAGATAATAATCGACTTC 59.135 37.037 14.91 14.91 43.02 3.01
246 249 7.651304 CAGCAGTGAAGAGATAATAATCGACTT 59.349 37.037 0.00 0.00 37.19 3.01
247 250 7.144661 CAGCAGTGAAGAGATAATAATCGACT 58.855 38.462 0.00 0.00 37.19 4.18
601 969 3.384668 CATATGCTCGATCGTCACCTTT 58.615 45.455 15.94 2.65 0.00 3.11
628 996 1.308069 GCCGGATTCACACAGCACAT 61.308 55.000 5.05 0.00 0.00 3.21
737 1105 1.212688 TGCCACATATGCTTGTAGGCT 59.787 47.619 1.58 0.00 40.93 4.58
924 1498 4.271776 GTCGGCTATAAATACAAGCGGTTT 59.728 41.667 0.00 0.00 37.69 3.27
1235 1815 2.202623 GGCGCGGTCTACTGAGTG 60.203 66.667 8.83 0.00 0.00 3.51
1582 2187 3.283751 TCGGGTGAAACAACAAACAGAT 58.716 40.909 0.00 0.00 39.98 2.90
1583 2188 2.712709 TCGGGTGAAACAACAAACAGA 58.287 42.857 0.00 0.00 39.98 3.41
1584 2189 3.315191 AGATCGGGTGAAACAACAAACAG 59.685 43.478 0.00 0.00 39.98 3.16
1585 2190 3.283751 AGATCGGGTGAAACAACAAACA 58.716 40.909 0.00 0.00 39.98 2.83
1586 2191 3.982576 AGATCGGGTGAAACAACAAAC 57.017 42.857 0.00 0.00 39.98 2.93
1587 2192 5.008217 CAGTTAGATCGGGTGAAACAACAAA 59.992 40.000 0.00 0.00 39.98 2.83
1590 2195 4.062991 ACAGTTAGATCGGGTGAAACAAC 58.937 43.478 0.00 0.00 39.98 3.32
1599 2214 3.306166 CGTAAAAGCACAGTTAGATCGGG 59.694 47.826 0.00 0.00 0.00 5.14
1600 2215 4.171005 TCGTAAAAGCACAGTTAGATCGG 58.829 43.478 0.00 0.00 0.00 4.18
1608 2223 4.327357 CGATCAGATTCGTAAAAGCACAGT 59.673 41.667 0.00 0.00 34.46 3.55
1610 2225 3.616821 CCGATCAGATTCGTAAAAGCACA 59.383 43.478 0.00 0.00 37.42 4.57
1611 2226 3.617263 ACCGATCAGATTCGTAAAAGCAC 59.383 43.478 0.00 0.00 37.42 4.40
1613 2228 3.617263 ACACCGATCAGATTCGTAAAAGC 59.383 43.478 0.00 0.00 37.42 3.51
1614 2229 5.220416 GGAACACCGATCAGATTCGTAAAAG 60.220 44.000 0.00 0.00 37.42 2.27
1617 2232 3.193903 TGGAACACCGATCAGATTCGTAA 59.806 43.478 0.00 0.00 37.42 3.18
1618 2233 2.756207 TGGAACACCGATCAGATTCGTA 59.244 45.455 0.00 0.00 37.42 3.43
1619 2234 1.548719 TGGAACACCGATCAGATTCGT 59.451 47.619 0.00 0.00 37.42 3.85
1620 2235 2.293677 TGGAACACCGATCAGATTCG 57.706 50.000 0.00 0.00 38.83 3.34
1646 2268 7.599998 CCCCAACACCTATATATACGTTGTAAC 59.400 40.741 16.39 0.00 33.56 2.50
1647 2269 7.289782 ACCCCAACACCTATATATACGTTGTAA 59.710 37.037 16.39 0.00 33.56 2.41
1657 2279 2.899256 GCCGTACCCCAACACCTATATA 59.101 50.000 0.00 0.00 0.00 0.86
1658 2280 1.695788 GCCGTACCCCAACACCTATAT 59.304 52.381 0.00 0.00 0.00 0.86
1773 2395 4.987285 CACTAGACCAAATCATCGATCAGG 59.013 45.833 0.00 0.00 0.00 3.86
1774 2396 5.595885 ACACTAGACCAAATCATCGATCAG 58.404 41.667 0.00 0.00 0.00 2.90
1780 2402 9.262358 GATTAGGTTACACTAGACCAAATCATC 57.738 37.037 0.00 0.00 38.42 2.92
1781 2403 8.768397 TGATTAGGTTACACTAGACCAAATCAT 58.232 33.333 0.00 0.00 38.42 2.45
1782 2404 8.141298 TGATTAGGTTACACTAGACCAAATCA 57.859 34.615 0.00 0.00 38.42 2.57
1869 2497 0.749454 ATCGCCCTGCCACAGATTTC 60.749 55.000 0.00 0.00 32.44 2.17
1870 2498 1.033746 CATCGCCCTGCCACAGATTT 61.034 55.000 0.00 0.00 32.44 2.17
1871 2499 1.452651 CATCGCCCTGCCACAGATT 60.453 57.895 0.00 0.00 32.44 2.40
1873 2501 4.783621 GCATCGCCCTGCCACAGA 62.784 66.667 0.00 0.00 36.10 3.41
2460 3091 3.837213 TCTACGACGACGAAAGGAAAT 57.163 42.857 15.32 0.00 42.66 2.17
2495 3302 9.702494 CACTTATATAACAGCTGAGATCAATCA 57.298 33.333 23.35 0.00 0.00 2.57
2533 3340 8.268738 GCAGAAATTAACAACTCAATCAAACAC 58.731 33.333 0.00 0.00 0.00 3.32
2650 3457 3.338249 CAGGATGTAGAACCACCAGTTG 58.662 50.000 0.00 0.00 39.40 3.16
2911 3721 2.484770 CGTGATGATATTCAACCCCGGT 60.485 50.000 0.00 0.00 0.00 5.28
2962 3772 2.282180 ACGTTGGCGATGGGCTTT 60.282 55.556 2.36 0.00 42.94 3.51
3007 3817 0.907704 AGGACACGGCCTGGTTCATA 60.908 55.000 0.00 0.00 36.76 2.15
3022 3832 3.586892 CTTGAAGTCGGTAAGGAAGGAC 58.413 50.000 0.00 0.00 0.00 3.85
3097 3907 3.536158 TTTGTAATCAGCGTGCAGTTC 57.464 42.857 0.00 0.00 0.00 3.01
3127 3937 6.851837 CGTACGTACAAGATAAATCTCTGAGG 59.148 42.308 24.50 0.00 35.76 3.86
3817 4629 7.987268 TCTACACGTTATGTTGATCAAGATC 57.013 36.000 20.38 7.64 43.19 2.75
3846 4696 1.016627 TTGACAAGCAGCACACACTC 58.983 50.000 0.00 0.00 0.00 3.51
3849 4699 1.067364 CCAATTGACAAGCAGCACACA 59.933 47.619 7.12 0.00 0.00 3.72
3850 4700 1.337703 TCCAATTGACAAGCAGCACAC 59.662 47.619 7.12 0.00 0.00 3.82
3855 4705 9.859427 TTATCTAATTTTCCAATTGACAAGCAG 57.141 29.630 7.12 0.00 34.29 4.24
3958 4814 9.716507 CGAATCTTTACACAATATTAAACCAGG 57.283 33.333 0.00 0.00 0.00 4.45
3983 4839 4.484236 TCATGAAACAAGGCTAATTTGCG 58.516 39.130 5.80 0.00 0.00 4.85
3985 4841 6.680810 TGTCTCATGAAACAAGGCTAATTTG 58.319 36.000 0.00 0.00 0.00 2.32
4014 4870 2.898612 TGAAAATGCATTGGCTCAAGGA 59.101 40.909 13.82 0.00 41.91 3.36
4122 4980 2.513897 GAAATCAGGGGGACGCCG 60.514 66.667 1.93 0.00 44.92 6.46
4126 4984 1.007118 ACCATTGGAAATCAGGGGGAC 59.993 52.381 10.37 0.00 0.00 4.46
4142 5000 2.367512 GAGAGAGGGGCCCACCAT 60.368 66.667 27.72 10.09 42.91 3.55
4143 5001 3.194025 AAGAGAGAGGGGCCCACCA 62.194 63.158 27.72 0.00 42.91 4.17
4144 5002 2.285743 AAGAGAGAGGGGCCCACC 60.286 66.667 27.72 16.38 39.11 4.61
4145 5003 2.726351 CGAAGAGAGAGGGGCCCAC 61.726 68.421 27.72 20.26 0.00 4.61
4146 5004 2.364317 CGAAGAGAGAGGGGCCCA 60.364 66.667 27.72 0.00 0.00 5.36
4147 5005 3.157949 CCGAAGAGAGAGGGGCCC 61.158 72.222 17.12 17.12 0.00 5.80
4148 5006 1.554583 AAACCGAAGAGAGAGGGGCC 61.555 60.000 0.00 0.00 0.00 5.80
4149 5007 0.108089 GAAACCGAAGAGAGAGGGGC 60.108 60.000 0.00 0.00 0.00 5.80
4150 5008 1.562783 AGAAACCGAAGAGAGAGGGG 58.437 55.000 0.00 0.00 0.00 4.79
4151 5009 5.112686 CAATTAGAAACCGAAGAGAGAGGG 58.887 45.833 0.00 0.00 0.00 4.30
4152 5010 5.725362 ACAATTAGAAACCGAAGAGAGAGG 58.275 41.667 0.00 0.00 0.00 3.69
4153 5011 8.244802 TCTAACAATTAGAAACCGAAGAGAGAG 58.755 37.037 0.00 0.00 39.21 3.20
4154 5012 8.118976 TCTAACAATTAGAAACCGAAGAGAGA 57.881 34.615 0.00 0.00 39.21 3.10
4155 5013 8.244802 TCTCTAACAATTAGAAACCGAAGAGAG 58.755 37.037 0.00 0.00 41.43 3.20
4156 5014 8.118976 TCTCTAACAATTAGAAACCGAAGAGA 57.881 34.615 0.00 0.00 41.43 3.10
4157 5015 8.934507 ATCTCTAACAATTAGAAACCGAAGAG 57.065 34.615 0.32 0.00 41.43 2.85
4158 5016 9.798994 GTATCTCTAACAATTAGAAACCGAAGA 57.201 33.333 0.32 0.00 41.43 2.87
4159 5017 9.582431 TGTATCTCTAACAATTAGAAACCGAAG 57.418 33.333 0.32 0.00 41.43 3.79
4196 5054 9.683069 GGCAAATCCTAAACTATCAAATACATG 57.317 33.333 0.00 0.00 0.00 3.21
4197 5055 8.567948 CGGCAAATCCTAAACTATCAAATACAT 58.432 33.333 0.00 0.00 0.00 2.29
4198 5056 7.554835 ACGGCAAATCCTAAACTATCAAATACA 59.445 33.333 0.00 0.00 0.00 2.29
4199 5057 7.927048 ACGGCAAATCCTAAACTATCAAATAC 58.073 34.615 0.00 0.00 0.00 1.89
4200 5058 7.990886 AGACGGCAAATCCTAAACTATCAAATA 59.009 33.333 0.00 0.00 0.00 1.40
4201 5059 6.828785 AGACGGCAAATCCTAAACTATCAAAT 59.171 34.615 0.00 0.00 0.00 2.32
4202 5060 6.177610 AGACGGCAAATCCTAAACTATCAAA 58.822 36.000 0.00 0.00 0.00 2.69
4203 5061 5.741011 AGACGGCAAATCCTAAACTATCAA 58.259 37.500 0.00 0.00 0.00 2.57
4204 5062 5.353394 AGACGGCAAATCCTAAACTATCA 57.647 39.130 0.00 0.00 0.00 2.15
4205 5063 4.750598 GGAGACGGCAAATCCTAAACTATC 59.249 45.833 0.00 0.00 0.00 2.08
4206 5064 4.409247 AGGAGACGGCAAATCCTAAACTAT 59.591 41.667 0.00 0.00 41.72 2.12
4207 5065 3.773119 AGGAGACGGCAAATCCTAAACTA 59.227 43.478 0.00 0.00 41.72 2.24
4208 5066 2.572104 AGGAGACGGCAAATCCTAAACT 59.428 45.455 0.00 0.00 41.72 2.66
4209 5067 2.987232 AGGAGACGGCAAATCCTAAAC 58.013 47.619 0.00 0.00 41.72 2.01
4210 5068 3.606687 GAAGGAGACGGCAAATCCTAAA 58.393 45.455 0.00 0.00 42.72 1.85
4211 5069 2.418197 CGAAGGAGACGGCAAATCCTAA 60.418 50.000 0.00 0.00 42.72 2.69
4212 5070 1.136305 CGAAGGAGACGGCAAATCCTA 59.864 52.381 0.00 0.00 42.72 2.94
4213 5071 0.108138 CGAAGGAGACGGCAAATCCT 60.108 55.000 0.00 0.00 45.50 3.24
4214 5072 0.391263 ACGAAGGAGACGGCAAATCC 60.391 55.000 0.00 0.00 34.93 3.01
4215 5073 1.439679 AACGAAGGAGACGGCAAATC 58.560 50.000 0.00 0.00 34.93 2.17
4216 5074 2.754946 TAACGAAGGAGACGGCAAAT 57.245 45.000 0.00 0.00 34.93 2.32
4217 5075 2.232941 AGATAACGAAGGAGACGGCAAA 59.767 45.455 0.00 0.00 34.93 3.68
4218 5076 1.822990 AGATAACGAAGGAGACGGCAA 59.177 47.619 0.00 0.00 34.93 4.52
4219 5077 1.404391 GAGATAACGAAGGAGACGGCA 59.596 52.381 0.00 0.00 34.93 5.69
4220 5078 1.677052 AGAGATAACGAAGGAGACGGC 59.323 52.381 0.00 0.00 34.93 5.68
4221 5079 3.499157 CCTAGAGATAACGAAGGAGACGG 59.501 52.174 0.00 0.00 34.93 4.79
4222 5080 4.378774 TCCTAGAGATAACGAAGGAGACG 58.621 47.826 0.00 0.00 32.60 4.18
4226 5084 4.747316 GCCTCTCCTAGAGATAACGAAGGA 60.747 50.000 5.50 0.00 45.07 3.36
4227 5085 3.504520 GCCTCTCCTAGAGATAACGAAGG 59.495 52.174 5.50 0.00 45.07 3.46
4228 5086 3.187637 CGCCTCTCCTAGAGATAACGAAG 59.812 52.174 5.50 0.00 45.07 3.79
4229 5087 3.139850 CGCCTCTCCTAGAGATAACGAA 58.860 50.000 5.50 0.00 45.07 3.85
4230 5088 2.104451 ACGCCTCTCCTAGAGATAACGA 59.896 50.000 14.18 0.00 45.07 3.85
4231 5089 2.481185 GACGCCTCTCCTAGAGATAACG 59.519 54.545 5.50 6.36 45.07 3.18
4232 5090 3.500680 CAGACGCCTCTCCTAGAGATAAC 59.499 52.174 5.50 0.00 45.07 1.89
4233 5091 3.497048 CCAGACGCCTCTCCTAGAGATAA 60.497 52.174 5.50 0.00 45.07 1.75
4234 5092 2.039216 CCAGACGCCTCTCCTAGAGATA 59.961 54.545 5.50 0.00 45.07 1.98
4235 5093 1.202879 CCAGACGCCTCTCCTAGAGAT 60.203 57.143 5.50 0.00 45.07 2.75
4236 5094 0.181587 CCAGACGCCTCTCCTAGAGA 59.818 60.000 5.50 0.00 45.07 3.10
4237 5095 1.452145 GCCAGACGCCTCTCCTAGAG 61.452 65.000 0.00 0.00 41.96 2.43
4238 5096 1.454111 GCCAGACGCCTCTCCTAGA 60.454 63.158 0.00 0.00 0.00 2.43
4239 5097 3.124686 GCCAGACGCCTCTCCTAG 58.875 66.667 0.00 0.00 0.00 3.02
4248 5106 1.578206 GAACTTGAAGGGCCAGACGC 61.578 60.000 6.18 0.00 0.00 5.19
4249 5107 0.250295 TGAACTTGAAGGGCCAGACG 60.250 55.000 6.18 0.00 0.00 4.18
4250 5108 2.206576 ATGAACTTGAAGGGCCAGAC 57.793 50.000 6.18 0.00 0.00 3.51
4251 5109 2.912956 AGTATGAACTTGAAGGGCCAGA 59.087 45.455 6.18 0.00 29.00 3.86
4252 5110 3.274288 GAGTATGAACTTGAAGGGCCAG 58.726 50.000 6.18 0.00 35.56 4.85
4253 5111 2.026262 GGAGTATGAACTTGAAGGGCCA 60.026 50.000 6.18 0.00 35.56 5.36
4254 5112 2.239907 AGGAGTATGAACTTGAAGGGCC 59.760 50.000 0.00 0.00 35.56 5.80
4255 5113 3.636153 AGGAGTATGAACTTGAAGGGC 57.364 47.619 0.00 0.00 35.56 5.19
4263 5121 9.835389 GGACGAGTATATATAGGAGTATGAACT 57.165 37.037 0.00 0.00 39.21 3.01
4264 5122 8.763356 CGGACGAGTATATATAGGAGTATGAAC 58.237 40.741 0.00 0.00 0.00 3.18
4265 5123 8.481314 ACGGACGAGTATATATAGGAGTATGAA 58.519 37.037 0.00 0.00 0.00 2.57
4266 5124 7.924947 CACGGACGAGTATATATAGGAGTATGA 59.075 40.741 0.00 0.00 0.00 2.15
4267 5125 7.924947 TCACGGACGAGTATATATAGGAGTATG 59.075 40.741 0.00 0.00 0.00 2.39
4268 5126 8.016301 TCACGGACGAGTATATATAGGAGTAT 57.984 38.462 0.00 0.00 0.00 2.12
4269 5127 7.410120 TCACGGACGAGTATATATAGGAGTA 57.590 40.000 0.00 0.00 0.00 2.59
4270 5128 6.291648 TCACGGACGAGTATATATAGGAGT 57.708 41.667 0.00 0.00 0.00 3.85
4271 5129 5.754406 CCTCACGGACGAGTATATATAGGAG 59.246 48.000 0.00 0.00 0.00 3.69
4272 5130 5.188555 ACCTCACGGACGAGTATATATAGGA 59.811 44.000 0.00 0.00 0.00 2.94
4273 5131 5.426504 ACCTCACGGACGAGTATATATAGG 58.573 45.833 0.00 0.00 0.00 2.57
4274 5132 6.592994 TGAACCTCACGGACGAGTATATATAG 59.407 42.308 0.00 0.00 0.00 1.31
4275 5133 6.466812 TGAACCTCACGGACGAGTATATATA 58.533 40.000 0.00 0.00 0.00 0.86
4276 5134 5.311265 TGAACCTCACGGACGAGTATATAT 58.689 41.667 0.00 0.00 0.00 0.86
4277 5135 4.707105 TGAACCTCACGGACGAGTATATA 58.293 43.478 0.00 0.00 0.00 0.86
4278 5136 3.548770 TGAACCTCACGGACGAGTATAT 58.451 45.455 0.00 0.00 0.00 0.86
4279 5137 2.989909 TGAACCTCACGGACGAGTATA 58.010 47.619 0.00 0.00 0.00 1.47
4280 5138 1.830279 TGAACCTCACGGACGAGTAT 58.170 50.000 0.00 0.00 0.00 2.12
4281 5139 1.608055 TTGAACCTCACGGACGAGTA 58.392 50.000 0.00 0.00 0.00 2.59
4282 5140 0.966920 ATTGAACCTCACGGACGAGT 59.033 50.000 0.00 0.00 0.00 4.18
4283 5141 2.094906 TGTATTGAACCTCACGGACGAG 60.095 50.000 0.00 0.00 0.00 4.18
4284 5142 1.887854 TGTATTGAACCTCACGGACGA 59.112 47.619 0.00 0.00 0.00 4.20
4285 5143 2.357327 TGTATTGAACCTCACGGACG 57.643 50.000 0.00 0.00 0.00 4.79
4286 5144 5.391629 GGATTTTGTATTGAACCTCACGGAC 60.392 44.000 0.00 0.00 0.00 4.79
4287 5145 4.698304 GGATTTTGTATTGAACCTCACGGA 59.302 41.667 0.00 0.00 0.00 4.69
4288 5146 4.457603 TGGATTTTGTATTGAACCTCACGG 59.542 41.667 0.00 0.00 0.00 4.94
4289 5147 5.621197 TGGATTTTGTATTGAACCTCACG 57.379 39.130 0.00 0.00 0.00 4.35
4290 5148 6.311200 GCATTGGATTTTGTATTGAACCTCAC 59.689 38.462 0.00 0.00 0.00 3.51
4291 5149 6.014755 TGCATTGGATTTTGTATTGAACCTCA 60.015 34.615 0.00 0.00 0.00 3.86
4292 5150 6.397272 TGCATTGGATTTTGTATTGAACCTC 58.603 36.000 0.00 0.00 0.00 3.85
4293 5151 6.357579 TGCATTGGATTTTGTATTGAACCT 57.642 33.333 0.00 0.00 0.00 3.50
4294 5152 7.614124 AATGCATTGGATTTTGTATTGAACC 57.386 32.000 12.09 0.00 28.80 3.62
4295 5153 8.320295 CGTAATGCATTGGATTTTGTATTGAAC 58.680 33.333 22.27 5.10 31.82 3.18
4296 5154 7.009999 GCGTAATGCATTGGATTTTGTATTGAA 59.990 33.333 22.27 0.00 45.45 2.69
4297 5155 6.475076 GCGTAATGCATTGGATTTTGTATTGA 59.525 34.615 22.27 0.00 45.45 2.57
4298 5156 6.639212 GCGTAATGCATTGGATTTTGTATTG 58.361 36.000 22.27 0.00 45.45 1.90
4299 5157 6.826893 GCGTAATGCATTGGATTTTGTATT 57.173 33.333 22.27 0.00 45.45 1.89
4314 5172 1.067060 GGGAAAGGATTGGCGTAATGC 59.933 52.381 0.00 0.00 45.38 3.56
4315 5173 2.618709 GAGGGAAAGGATTGGCGTAATG 59.381 50.000 0.00 0.00 0.00 1.90
4316 5174 2.509964 AGAGGGAAAGGATTGGCGTAAT 59.490 45.455 0.00 0.00 0.00 1.89
4317 5175 1.913419 AGAGGGAAAGGATTGGCGTAA 59.087 47.619 0.00 0.00 0.00 3.18
4318 5176 1.580059 AGAGGGAAAGGATTGGCGTA 58.420 50.000 0.00 0.00 0.00 4.42
4319 5177 1.580059 TAGAGGGAAAGGATTGGCGT 58.420 50.000 0.00 0.00 0.00 5.68
4320 5178 2.370189 AGATAGAGGGAAAGGATTGGCG 59.630 50.000 0.00 0.00 0.00 5.69
4321 5179 3.650461 AGAGATAGAGGGAAAGGATTGGC 59.350 47.826 0.00 0.00 0.00 4.52
4322 5180 5.606329 AGAAGAGATAGAGGGAAAGGATTGG 59.394 44.000 0.00 0.00 0.00 3.16
4323 5181 6.745794 AGAAGAGATAGAGGGAAAGGATTG 57.254 41.667 0.00 0.00 0.00 2.67
4326 5184 9.540538 CATATTAGAAGAGATAGAGGGAAAGGA 57.459 37.037 0.00 0.00 0.00 3.36
4327 5185 9.540538 TCATATTAGAAGAGATAGAGGGAAAGG 57.459 37.037 0.00 0.00 0.00 3.11
4341 5199 9.775539 AGGTTAGGCTGATATCATATTAGAAGA 57.224 33.333 5.72 0.00 0.00 2.87
4346 5204 9.951866 TGGATAGGTTAGGCTGATATCATATTA 57.048 33.333 5.72 0.00 0.00 0.98
4347 5205 8.860517 TGGATAGGTTAGGCTGATATCATATT 57.139 34.615 5.72 0.00 0.00 1.28
4348 5206 8.860517 TTGGATAGGTTAGGCTGATATCATAT 57.139 34.615 5.72 0.00 0.00 1.78
4349 5207 8.540388 GTTTGGATAGGTTAGGCTGATATCATA 58.460 37.037 5.72 0.00 0.00 2.15
4350 5208 7.398024 GTTTGGATAGGTTAGGCTGATATCAT 58.602 38.462 5.72 0.00 0.00 2.45
4351 5209 6.239887 GGTTTGGATAGGTTAGGCTGATATCA 60.240 42.308 5.07 5.07 0.00 2.15
4352 5210 6.174049 GGTTTGGATAGGTTAGGCTGATATC 58.826 44.000 0.00 0.00 0.00 1.63
4353 5211 5.610982 TGGTTTGGATAGGTTAGGCTGATAT 59.389 40.000 0.00 0.00 0.00 1.63
4354 5212 4.972568 TGGTTTGGATAGGTTAGGCTGATA 59.027 41.667 0.00 0.00 0.00 2.15
4355 5213 3.785887 TGGTTTGGATAGGTTAGGCTGAT 59.214 43.478 0.00 0.00 0.00 2.90
4356 5214 3.186283 TGGTTTGGATAGGTTAGGCTGA 58.814 45.455 0.00 0.00 0.00 4.26
4357 5215 3.644966 TGGTTTGGATAGGTTAGGCTG 57.355 47.619 0.00 0.00 0.00 4.85
4358 5216 4.202472 GCTATGGTTTGGATAGGTTAGGCT 60.202 45.833 0.00 0.00 0.00 4.58
4359 5217 4.072839 GCTATGGTTTGGATAGGTTAGGC 58.927 47.826 0.00 0.00 0.00 3.93
4360 5218 4.652822 GGCTATGGTTTGGATAGGTTAGG 58.347 47.826 0.00 0.00 0.00 2.69
4361 5219 4.202326 ACGGCTATGGTTTGGATAGGTTAG 60.202 45.833 0.00 0.00 0.00 2.34
4362 5220 3.712733 ACGGCTATGGTTTGGATAGGTTA 59.287 43.478 0.00 0.00 0.00 2.85
4363 5221 2.508300 ACGGCTATGGTTTGGATAGGTT 59.492 45.455 0.00 0.00 0.00 3.50
4364 5222 2.124411 ACGGCTATGGTTTGGATAGGT 58.876 47.619 0.00 0.00 0.00 3.08
4365 5223 2.930826 ACGGCTATGGTTTGGATAGG 57.069 50.000 0.00 0.00 0.00 2.57
4366 5224 4.699637 TGTTACGGCTATGGTTTGGATAG 58.300 43.478 0.00 0.00 0.00 2.08
4367 5225 4.443739 CCTGTTACGGCTATGGTTTGGATA 60.444 45.833 0.00 0.00 0.00 2.59
4368 5226 3.541632 CTGTTACGGCTATGGTTTGGAT 58.458 45.455 0.00 0.00 0.00 3.41
4369 5227 2.355310 CCTGTTACGGCTATGGTTTGGA 60.355 50.000 0.00 0.00 0.00 3.53
4370 5228 2.014128 CCTGTTACGGCTATGGTTTGG 58.986 52.381 0.00 0.00 0.00 3.28
4371 5229 2.014128 CCCTGTTACGGCTATGGTTTG 58.986 52.381 0.00 0.00 0.00 2.93
4372 5230 1.910671 TCCCTGTTACGGCTATGGTTT 59.089 47.619 0.00 0.00 0.00 3.27
4373 5231 1.575419 TCCCTGTTACGGCTATGGTT 58.425 50.000 0.00 0.00 0.00 3.67
4374 5232 1.575419 TTCCCTGTTACGGCTATGGT 58.425 50.000 0.00 0.00 0.00 3.55
4375 5233 2.702592 TTTCCCTGTTACGGCTATGG 57.297 50.000 0.00 0.00 0.00 2.74
4376 5234 6.877611 AATATTTTCCCTGTTACGGCTATG 57.122 37.500 0.00 0.00 0.00 2.23
4377 5235 8.983702 TTTAATATTTTCCCTGTTACGGCTAT 57.016 30.769 0.00 0.00 0.00 2.97
4378 5236 8.983702 ATTTAATATTTTCCCTGTTACGGCTA 57.016 30.769 0.00 0.00 0.00 3.93
4379 5237 7.891498 ATTTAATATTTTCCCTGTTACGGCT 57.109 32.000 0.00 0.00 0.00 5.52
4380 5238 8.936070 AAATTTAATATTTTCCCTGTTACGGC 57.064 30.769 0.00 0.00 0.00 5.68
4397 5255 9.939802 ACGAGTCAGACTTTAGGTAAATTTAAT 57.060 29.630 4.05 0.00 0.00 1.40
4398 5256 9.199982 CACGAGTCAGACTTTAGGTAAATTTAA 57.800 33.333 4.05 0.00 0.00 1.52
4399 5257 7.330208 GCACGAGTCAGACTTTAGGTAAATTTA 59.670 37.037 4.05 0.00 0.00 1.40
4400 5258 6.147328 GCACGAGTCAGACTTTAGGTAAATTT 59.853 38.462 4.05 0.00 0.00 1.82
4401 5259 5.638234 GCACGAGTCAGACTTTAGGTAAATT 59.362 40.000 4.05 0.00 0.00 1.82
4402 5260 5.169295 GCACGAGTCAGACTTTAGGTAAAT 58.831 41.667 4.05 0.00 0.00 1.40
4403 5261 4.038282 TGCACGAGTCAGACTTTAGGTAAA 59.962 41.667 4.05 0.00 0.00 2.01
4404 5262 3.570975 TGCACGAGTCAGACTTTAGGTAA 59.429 43.478 4.05 0.00 0.00 2.85
4405 5263 3.151554 TGCACGAGTCAGACTTTAGGTA 58.848 45.455 4.05 0.00 0.00 3.08
4406 5264 1.961394 TGCACGAGTCAGACTTTAGGT 59.039 47.619 4.05 0.00 0.00 3.08
4407 5265 2.600731 CTGCACGAGTCAGACTTTAGG 58.399 52.381 4.05 0.00 33.54 2.69
4408 5266 1.989165 GCTGCACGAGTCAGACTTTAG 59.011 52.381 4.05 2.48 33.54 1.85
4409 5267 1.613925 AGCTGCACGAGTCAGACTTTA 59.386 47.619 4.05 0.00 33.54 1.85
4410 5268 0.390860 AGCTGCACGAGTCAGACTTT 59.609 50.000 4.05 0.00 33.54 2.66
4411 5269 0.319383 CAGCTGCACGAGTCAGACTT 60.319 55.000 4.05 0.00 33.54 3.01
4412 5270 1.288439 CAGCTGCACGAGTCAGACT 59.712 57.895 1.46 1.46 33.54 3.24
4413 5271 2.378858 GCAGCTGCACGAGTCAGAC 61.379 63.158 33.36 0.00 41.59 3.51
4414 5272 2.048784 GCAGCTGCACGAGTCAGA 60.049 61.111 33.36 0.00 41.59 3.27
4415 5273 3.476646 CGCAGCTGCACGAGTCAG 61.477 66.667 36.03 15.08 42.21 3.51
4428 5286 2.300066 TGTCAACGAACGAGCGCAG 61.300 57.895 11.47 5.62 33.86 5.18
4429 5287 2.278923 TGTCAACGAACGAGCGCA 60.279 55.556 11.47 0.00 33.86 6.09
4430 5288 2.167918 GTGTCAACGAACGAGCGC 59.832 61.111 0.00 0.00 33.86 5.92
4440 5298 4.349871 GCGTGCGGTCGTGTCAAC 62.350 66.667 0.00 0.00 0.00 3.18
4441 5299 4.874977 TGCGTGCGGTCGTGTCAA 62.875 61.111 0.00 0.00 0.00 3.18
4453 5311 2.667536 AGAAGGCTGCAGTGCGTG 60.668 61.111 16.64 7.10 0.00 5.34
4454 5312 2.460662 ATCAGAAGGCTGCAGTGCGT 62.461 55.000 16.64 0.79 42.01 5.24
4455 5313 1.744368 ATCAGAAGGCTGCAGTGCG 60.744 57.895 16.64 6.61 42.01 5.34
4456 5314 1.801332 CATCAGAAGGCTGCAGTGC 59.199 57.895 16.64 8.58 42.01 4.40
4457 5315 0.958876 TGCATCAGAAGGCTGCAGTG 60.959 55.000 16.64 5.17 40.75 3.66
4458 5316 1.377612 TGCATCAGAAGGCTGCAGT 59.622 52.632 16.64 0.00 40.75 4.40
4459 5317 4.313819 TGCATCAGAAGGCTGCAG 57.686 55.556 10.11 10.11 40.75 4.41
4460 5318 4.313819 CTGCATCAGAAGGCTGCA 57.686 55.556 0.50 0.00 43.20 4.41
4461 5319 2.799371 GCTGCATCAGAAGGCTGC 59.201 61.111 11.73 11.73 46.96 5.25
4462 5320 1.744368 ACGCTGCATCAGAAGGCTG 60.744 57.895 0.00 0.00 43.67 4.85
4463 5321 1.744368 CACGCTGCATCAGAAGGCT 60.744 57.895 0.00 0.00 32.44 4.58
4464 5322 2.758089 CCACGCTGCATCAGAAGGC 61.758 63.158 0.00 0.00 32.44 4.35
4465 5323 2.758089 GCCACGCTGCATCAGAAGG 61.758 63.158 0.00 0.00 32.44 3.46
4466 5324 2.789917 GCCACGCTGCATCAGAAG 59.210 61.111 0.00 0.00 32.44 2.85
4467 5325 2.857575 ATCGCCACGCTGCATCAGAA 62.858 55.000 0.00 0.00 32.44 3.02
4468 5326 3.375472 ATCGCCACGCTGCATCAGA 62.375 57.895 0.00 0.00 32.44 3.27
4469 5327 2.879070 GATCGCCACGCTGCATCAG 61.879 63.158 0.00 0.00 34.12 2.90
4470 5328 2.891936 GATCGCCACGCTGCATCA 60.892 61.111 0.00 0.00 0.00 3.07
4471 5329 2.587194 AGATCGCCACGCTGCATC 60.587 61.111 0.00 0.00 0.00 3.91
4472 5330 2.587194 GAGATCGCCACGCTGCAT 60.587 61.111 0.00 0.00 0.00 3.96
4473 5331 4.819761 GGAGATCGCCACGCTGCA 62.820 66.667 11.06 0.00 0.00 4.41
4475 5333 3.842923 AGGGAGATCGCCACGCTG 61.843 66.667 17.90 0.00 0.00 5.18
4476 5334 3.842923 CAGGGAGATCGCCACGCT 61.843 66.667 17.90 2.30 0.00 5.07
4520 5378 2.856346 CTCGCGCAATCCCGTAACG 61.856 63.158 8.75 0.00 0.00 3.18
4521 5379 2.522638 CCTCGCGCAATCCCGTAAC 61.523 63.158 8.75 0.00 0.00 2.50
4522 5380 2.202824 CCTCGCGCAATCCCGTAA 60.203 61.111 8.75 0.00 0.00 3.18
4523 5381 4.884257 GCCTCGCGCAATCCCGTA 62.884 66.667 8.75 0.00 37.47 4.02
4556 5414 0.465642 CTGGAATAAAGGGTCGGGCC 60.466 60.000 0.00 0.00 0.00 5.80
4557 5415 0.465642 CCTGGAATAAAGGGTCGGGC 60.466 60.000 0.00 0.00 0.00 6.13
4558 5416 0.465642 GCCTGGAATAAAGGGTCGGG 60.466 60.000 0.00 0.00 35.17 5.14
4559 5417 0.814010 CGCCTGGAATAAAGGGTCGG 60.814 60.000 0.00 0.00 35.17 4.79
4560 5418 0.177141 TCGCCTGGAATAAAGGGTCG 59.823 55.000 0.00 0.00 35.17 4.79
4561 5419 2.413310 TTCGCCTGGAATAAAGGGTC 57.587 50.000 0.00 0.00 35.17 4.46
4562 5420 2.823747 GTTTTCGCCTGGAATAAAGGGT 59.176 45.455 0.00 0.00 35.17 4.34
4563 5421 3.089284 AGTTTTCGCCTGGAATAAAGGG 58.911 45.455 0.00 0.00 35.17 3.95
4564 5422 3.673323 GCAGTTTTCGCCTGGAATAAAGG 60.673 47.826 0.00 0.00 37.91 3.11
4565 5423 3.501950 GCAGTTTTCGCCTGGAATAAAG 58.498 45.455 0.00 0.00 33.85 1.85
4566 5424 2.230266 GGCAGTTTTCGCCTGGAATAAA 59.770 45.455 0.00 0.00 46.56 1.40
4567 5425 1.816224 GGCAGTTTTCGCCTGGAATAA 59.184 47.619 0.00 0.00 46.56 1.40
4568 5426 1.459450 GGCAGTTTTCGCCTGGAATA 58.541 50.000 0.00 0.00 46.56 1.75
4569 5427 2.267045 GGCAGTTTTCGCCTGGAAT 58.733 52.632 0.00 0.00 46.56 3.01
4570 5428 3.758172 GGCAGTTTTCGCCTGGAA 58.242 55.556 0.00 0.00 46.56 3.53
4576 5434 3.683587 GATGCGGGGCAGTTTTCGC 62.684 63.158 0.00 0.00 43.65 4.70
4577 5435 2.485122 GATGCGGGGCAGTTTTCG 59.515 61.111 0.00 0.00 43.65 3.46
4578 5436 2.710902 GGGATGCGGGGCAGTTTTC 61.711 63.158 0.00 0.00 43.65 2.29
4579 5437 2.679996 GGGATGCGGGGCAGTTTT 60.680 61.111 0.00 0.00 43.65 2.43
4580 5438 4.759205 GGGGATGCGGGGCAGTTT 62.759 66.667 0.00 0.00 43.65 2.66
4591 5449 0.036010 AACAAGACGAGCAGGGGATG 60.036 55.000 0.00 0.00 0.00 3.51
4592 5450 0.250513 GAACAAGACGAGCAGGGGAT 59.749 55.000 0.00 0.00 0.00 3.85
4593 5451 1.671742 GAACAAGACGAGCAGGGGA 59.328 57.895 0.00 0.00 0.00 4.81
4594 5452 1.738099 CGAACAAGACGAGCAGGGG 60.738 63.158 0.00 0.00 0.00 4.79
4595 5453 0.319555 TTCGAACAAGACGAGCAGGG 60.320 55.000 0.00 0.00 40.72 4.45
4596 5454 1.192534 GTTTCGAACAAGACGAGCAGG 59.807 52.381 0.00 0.00 40.72 4.85
4597 5455 1.192534 GGTTTCGAACAAGACGAGCAG 59.807 52.381 0.00 0.00 40.72 4.24
4598 5456 1.214367 GGTTTCGAACAAGACGAGCA 58.786 50.000 0.00 0.00 40.72 4.26
4599 5457 0.161024 CGGTTTCGAACAAGACGAGC 59.839 55.000 0.00 0.00 40.72 5.03
4600 5458 0.161024 GCGGTTTCGAACAAGACGAG 59.839 55.000 0.00 0.00 40.72 4.18
4601 5459 1.216941 GGCGGTTTCGAACAAGACGA 61.217 55.000 0.00 0.00 39.00 4.20
4602 5460 1.203313 GGCGGTTTCGAACAAGACG 59.797 57.895 0.00 0.00 39.00 4.18
4603 5461 1.572941 GGGCGGTTTCGAACAAGAC 59.427 57.895 0.00 0.00 39.00 3.01
4604 5462 1.957186 CGGGCGGTTTCGAACAAGA 60.957 57.895 0.00 0.00 39.00 3.02
4605 5463 2.554272 CGGGCGGTTTCGAACAAG 59.446 61.111 0.00 0.00 39.00 3.16
4606 5464 3.652000 GCGGGCGGTTTCGAACAA 61.652 61.111 0.00 0.00 39.00 2.83
4626 5484 0.248215 CGAATGAAATCTGCGGGTGC 60.248 55.000 0.00 0.00 43.20 5.01
4627 5485 1.368641 TCGAATGAAATCTGCGGGTG 58.631 50.000 0.00 0.00 0.00 4.61
4628 5486 1.737793 GTTCGAATGAAATCTGCGGGT 59.262 47.619 0.00 0.00 35.46 5.28
4629 5487 2.009774 AGTTCGAATGAAATCTGCGGG 58.990 47.619 0.00 0.00 35.46 6.13
4630 5488 2.285256 CGAGTTCGAATGAAATCTGCGG 60.285 50.000 0.00 0.00 44.77 5.69
4631 5489 2.345641 ACGAGTTCGAATGAAATCTGCG 59.654 45.455 8.72 2.00 44.77 5.18
4632 5490 3.614616 AGACGAGTTCGAATGAAATCTGC 59.385 43.478 8.72 0.00 44.77 4.26
4633 5491 4.266502 GGAGACGAGTTCGAATGAAATCTG 59.733 45.833 8.72 1.42 44.77 2.90
4634 5492 4.425520 GGAGACGAGTTCGAATGAAATCT 58.574 43.478 8.72 1.32 44.77 2.40
4635 5493 3.552294 GGGAGACGAGTTCGAATGAAATC 59.448 47.826 8.72 0.00 43.81 2.17
4636 5494 3.195825 AGGGAGACGAGTTCGAATGAAAT 59.804 43.478 8.72 0.00 43.02 2.17
4637 5495 2.561419 AGGGAGACGAGTTCGAATGAAA 59.439 45.455 8.72 0.00 43.02 2.69
4638 5496 2.163815 GAGGGAGACGAGTTCGAATGAA 59.836 50.000 8.72 0.00 43.02 2.57
4639 5497 1.743958 GAGGGAGACGAGTTCGAATGA 59.256 52.381 8.72 0.00 43.02 2.57
4640 5498 1.202313 GGAGGGAGACGAGTTCGAATG 60.202 57.143 8.72 0.00 43.02 2.67
4641 5499 1.104630 GGAGGGAGACGAGTTCGAAT 58.895 55.000 8.72 0.00 43.02 3.34
4642 5500 0.964358 GGGAGGGAGACGAGTTCGAA 60.964 60.000 8.72 0.00 43.02 3.71
4643 5501 1.378250 GGGAGGGAGACGAGTTCGA 60.378 63.158 8.72 0.00 43.02 3.71
4644 5502 2.416432 GGGGAGGGAGACGAGTTCG 61.416 68.421 0.00 0.00 46.33 3.95
4645 5503 2.059190 GGGGGAGGGAGACGAGTTC 61.059 68.421 0.00 0.00 0.00 3.01
4646 5504 2.039137 GGGGGAGGGAGACGAGTT 59.961 66.667 0.00 0.00 0.00 3.01
4647 5505 2.517582 GAAGGGGGAGGGAGACGAGT 62.518 65.000 0.00 0.00 0.00 4.18
4648 5506 1.758906 GAAGGGGGAGGGAGACGAG 60.759 68.421 0.00 0.00 0.00 4.18
4649 5507 2.363361 GAAGGGGGAGGGAGACGA 59.637 66.667 0.00 0.00 0.00 4.20
4650 5508 2.764547 GGAAGGGGGAGGGAGACG 60.765 72.222 0.00 0.00 0.00 4.18
4651 5509 1.383386 GAGGAAGGGGGAGGGAGAC 60.383 68.421 0.00 0.00 0.00 3.36
4652 5510 1.550374 AGAGGAAGGGGGAGGGAGA 60.550 63.158 0.00 0.00 0.00 3.71
4653 5511 1.074850 GAGAGGAAGGGGGAGGGAG 60.075 68.421 0.00 0.00 0.00 4.30
4654 5512 2.647949 GGAGAGGAAGGGGGAGGGA 61.648 68.421 0.00 0.00 0.00 4.20
4655 5513 2.040359 GGAGAGGAAGGGGGAGGG 60.040 72.222 0.00 0.00 0.00 4.30
4656 5514 1.074850 GAGGAGAGGAAGGGGGAGG 60.075 68.421 0.00 0.00 0.00 4.30
4657 5515 1.146982 CTAGAGGAGAGGAAGGGGGAG 59.853 61.905 0.00 0.00 0.00 4.30
4658 5516 1.236708 CTAGAGGAGAGGAAGGGGGA 58.763 60.000 0.00 0.00 0.00 4.81
4659 5517 0.471022 GCTAGAGGAGAGGAAGGGGG 60.471 65.000 0.00 0.00 0.00 5.40
4660 5518 0.263172 TGCTAGAGGAGAGGAAGGGG 59.737 60.000 0.00 0.00 0.00 4.79
4661 5519 1.760029 GTTGCTAGAGGAGAGGAAGGG 59.240 57.143 0.00 0.00 0.00 3.95
4662 5520 1.407258 CGTTGCTAGAGGAGAGGAAGG 59.593 57.143 0.00 0.00 0.00 3.46
4663 5521 1.407258 CCGTTGCTAGAGGAGAGGAAG 59.593 57.143 0.00 0.00 0.00 3.46
4664 5522 1.475403 CCGTTGCTAGAGGAGAGGAA 58.525 55.000 0.00 0.00 0.00 3.36
4665 5523 1.038130 GCCGTTGCTAGAGGAGAGGA 61.038 60.000 0.00 0.00 33.53 3.71
4666 5524 1.439644 GCCGTTGCTAGAGGAGAGG 59.560 63.158 0.00 0.00 33.53 3.69
4667 5525 1.064946 CGCCGTTGCTAGAGGAGAG 59.935 63.158 0.00 0.00 34.43 3.20
4668 5526 3.064987 GCGCCGTTGCTAGAGGAGA 62.065 63.158 0.00 0.00 34.43 3.71
4669 5527 2.583593 GCGCCGTTGCTAGAGGAG 60.584 66.667 0.00 0.00 34.43 3.69
4670 5528 4.492160 CGCGCCGTTGCTAGAGGA 62.492 66.667 0.00 0.00 34.43 3.71
4671 5529 3.774959 ATCGCGCCGTTGCTAGAGG 62.775 63.158 0.00 0.00 34.43 3.69
4672 5530 2.278857 ATCGCGCCGTTGCTAGAG 60.279 61.111 0.00 0.00 34.43 2.43
4673 5531 2.582226 CATCGCGCCGTTGCTAGA 60.582 61.111 0.00 0.00 34.43 2.43
4674 5532 2.580470 CTCATCGCGCCGTTGCTAG 61.580 63.158 0.00 0.00 34.43 3.42
4675 5533 2.582226 CTCATCGCGCCGTTGCTA 60.582 61.111 0.00 0.00 34.43 3.49
4697 5555 4.722700 ATCCACCACCGCAGCACC 62.723 66.667 0.00 0.00 0.00 5.01
4698 5556 3.127533 GATCCACCACCGCAGCAC 61.128 66.667 0.00 0.00 0.00 4.40
4699 5557 4.408821 GGATCCACCACCGCAGCA 62.409 66.667 6.95 0.00 38.79 4.41
4701 5559 4.838152 CCGGATCCACCACCGCAG 62.838 72.222 13.41 0.00 46.59 5.18
4758 5616 4.504916 CCTGCAGCCGGAGACTCG 62.505 72.222 5.05 0.00 30.74 4.18
4759 5617 4.828925 GCCTGCAGCCGGAGACTC 62.829 72.222 5.05 0.00 34.35 3.36
4767 5625 3.622060 TTTACCTCCGCCTGCAGCC 62.622 63.158 8.66 0.00 38.78 4.85
4768 5626 2.046314 TTTACCTCCGCCTGCAGC 60.046 61.111 8.66 2.87 38.52 5.25
4769 5627 1.745489 GGTTTACCTCCGCCTGCAG 60.745 63.158 6.78 6.78 0.00 4.41
4770 5628 2.221299 AGGTTTACCTCCGCCTGCA 61.221 57.895 0.00 0.00 44.77 4.41
4771 5629 2.669240 AGGTTTACCTCCGCCTGC 59.331 61.111 0.00 0.00 44.77 4.85
4780 5638 2.558378 GGAATAGGTGCGAGGTTTACC 58.442 52.381 0.00 0.00 34.68 2.85
4781 5639 2.169978 AGGGAATAGGTGCGAGGTTTAC 59.830 50.000 0.00 0.00 0.00 2.01
4782 5640 2.433239 GAGGGAATAGGTGCGAGGTTTA 59.567 50.000 0.00 0.00 0.00 2.01
4783 5641 1.209747 GAGGGAATAGGTGCGAGGTTT 59.790 52.381 0.00 0.00 0.00 3.27
4784 5642 0.831307 GAGGGAATAGGTGCGAGGTT 59.169 55.000 0.00 0.00 0.00 3.50
4785 5643 2.517609 GAGGGAATAGGTGCGAGGT 58.482 57.895 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.