Multiple sequence alignment - TraesCS2D01G443200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G443200 chr2D 100.000 7099 0 0 1 7099 553990021 553997119 0.000000e+00 13110.0
1 TraesCS2D01G443200 chr2D 75.410 427 93 7 1 426 174392746 174392331 5.620000e-46 196.0
2 TraesCS2D01G443200 chr2B 92.343 3252 167 40 419 3631 660113321 660116529 0.000000e+00 4551.0
3 TraesCS2D01G443200 chr2B 95.793 1141 37 4 5236 6376 660118951 660120080 0.000000e+00 1831.0
4 TraesCS2D01G443200 chr2B 87.969 773 35 22 4442 5193 660117586 660118321 0.000000e+00 859.0
5 TraesCS2D01G443200 chr2B 91.121 428 34 4 1 426 660112416 660112841 1.720000e-160 577.0
6 TraesCS2D01G443200 chr2B 89.817 383 24 6 3974 4347 660116968 660117344 1.790000e-130 477.0
7 TraesCS2D01G443200 chr2B 86.387 191 23 3 6909 7097 660120076 660120265 9.330000e-49 206.0
8 TraesCS2D01G443200 chr2B 75.682 403 90 6 1 399 300435630 300435232 2.020000e-45 195.0
9 TraesCS2D01G443200 chr2B 95.652 69 3 0 4368 4436 660117535 660117603 2.090000e-20 111.0
10 TraesCS2D01G443200 chr2A 95.449 2483 85 18 419 2880 694442757 694445232 0.000000e+00 3934.0
11 TraesCS2D01G443200 chr2A 95.124 1005 34 10 5374 6372 694447670 694448665 0.000000e+00 1570.0
12 TraesCS2D01G443200 chr2A 87.310 1182 79 39 4110 5250 694446441 694447592 0.000000e+00 1286.0
13 TraesCS2D01G443200 chr2A 84.994 793 88 21 2883 3671 694445452 694446217 0.000000e+00 776.0
14 TraesCS2D01G443200 chr2A 86.296 540 69 5 6564 7099 694449714 694450252 3.690000e-162 582.0
15 TraesCS2D01G443200 chr2A 78.280 465 90 8 1580 2040 469818782 469818325 9.010000e-74 289.0
16 TraesCS2D01G443200 chr2A 76.581 427 79 12 2 426 174339338 174338931 1.550000e-51 215.0
17 TraesCS2D01G443200 chr2A 92.157 51 2 1 2761 2809 523862858 523862808 3.550000e-08 71.3
18 TraesCS2D01G443200 chr4D 77.154 1033 193 34 1025 2040 47894585 47895591 1.730000e-155 560.0
19 TraesCS2D01G443200 chr4D 87.861 346 38 4 2208 2551 47895756 47896099 3.080000e-108 403.0
20 TraesCS2D01G443200 chr4A 76.916 1031 195 32 1033 2040 549820821 549819811 4.840000e-151 545.0
21 TraesCS2D01G443200 chr4A 87.826 345 40 2 2208 2551 549819637 549819294 3.080000e-108 403.0
22 TraesCS2D01G443200 chr4B 87.246 345 42 2 2208 2551 70551898 70552241 6.680000e-105 392.0
23 TraesCS2D01G443200 chr4B 81.250 80 5 6 6479 6550 23985386 23985463 1.000000e-03 56.5
24 TraesCS2D01G443200 chr6A 86.087 345 38 3 2216 2551 66269039 66269382 5.230000e-96 363.0
25 TraesCS2D01G443200 chr6A 84.722 72 9 2 2401 2471 615773268 615773338 3.550000e-08 71.3
26 TraesCS2D01G443200 chr5A 78.495 465 89 8 1580 2040 55267161 55266704 1.940000e-75 294.0
27 TraesCS2D01G443200 chr6B 78.065 465 91 8 1580 2040 650650991 650650534 4.190000e-72 283.0
28 TraesCS2D01G443200 chr6B 89.552 67 7 0 2208 2274 650650366 650650300 1.270000e-12 86.1
29 TraesCS2D01G443200 chr3D 78.706 371 71 7 53 417 480678167 480677799 2.560000e-59 241.0
30 TraesCS2D01G443200 chr3D 81.818 165 29 1 1 164 444050601 444050765 3.450000e-28 137.0
31 TraesCS2D01G443200 chr7D 79.008 262 51 4 1 261 542977572 542977314 7.320000e-40 176.0
32 TraesCS2D01G443200 chr3B 76.852 324 67 7 1 321 707029617 707029935 7.320000e-40 176.0
33 TraesCS2D01G443200 chr5B 79.695 197 32 5 6904 7098 328114996 328114806 1.240000e-27 135.0
34 TraesCS2D01G443200 chr5B 82.353 153 23 2 1 153 653430695 653430843 5.780000e-26 130.0
35 TraesCS2D01G443200 chr1B 95.238 42 0 1 2768 2807 5948712 5948671 1.650000e-06 65.8
36 TraesCS2D01G443200 chrUn 78.788 99 17 4 5439 5536 122077422 122077517 5.950000e-06 63.9
37 TraesCS2D01G443200 chr3A 91.489 47 0 1 2765 2807 13492889 13492843 2.140000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G443200 chr2D 553990021 553997119 7098 False 13110.000000 13110 100.000000 1 7099 1 chr2D.!!$F1 7098
1 TraesCS2D01G443200 chr2B 660112416 660120265 7849 False 1230.285714 4551 91.297429 1 7097 7 chr2B.!!$F1 7096
2 TraesCS2D01G443200 chr2A 694442757 694450252 7495 False 1629.600000 3934 89.834600 419 7099 5 chr2A.!!$F1 6680
3 TraesCS2D01G443200 chr4D 47894585 47896099 1514 False 481.500000 560 82.507500 1025 2551 2 chr4D.!!$F1 1526
4 TraesCS2D01G443200 chr4A 549819294 549820821 1527 True 474.000000 545 82.371000 1033 2551 2 chr4A.!!$R1 1518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.179073 AATGCCGGTGATCTCCTTCG 60.179 55.000 11.86 0.00 0.00 3.79 F
128 129 0.393537 GGAGGTTGGATGAGGCACTG 60.394 60.000 0.00 0.00 41.55 3.66 F
237 239 0.670854 GGAGCAGGTTCCTCGACAAC 60.671 60.000 0.00 0.00 34.27 3.32 F
647 1144 0.738389 ACACACAACTTTGCTTCCCG 59.262 50.000 0.00 0.00 0.00 5.14 F
1325 1830 2.738521 CCACGACAACCGCCTCAG 60.739 66.667 0.00 0.00 43.32 3.35 F
3048 3833 0.533951 CAGCAGGGCATTTTCCTTCC 59.466 55.000 0.00 0.00 31.06 3.46 F
3801 4595 0.105039 GCCAGGATCTAACGTCTGGG 59.895 60.000 17.54 3.34 45.00 4.45 F
3878 4675 0.663153 GCTTTGCGTCCTTTGTCTGT 59.337 50.000 0.00 0.00 0.00 3.41 F
4189 5126 0.882042 GGCGATTCGATCCACTGCAT 60.882 55.000 10.88 0.00 0.00 3.96 F
5043 6198 0.037975 CAGGCAGCAATGGTTGGTTC 60.038 55.000 0.00 0.00 39.79 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1444 1949 0.526662 GAGTTCCTGGACACGTCGAT 59.473 55.000 0.00 0.0 0.00 3.59 R
1809 2314 1.527380 GGGGTTGTTGAGGAACGCA 60.527 57.895 0.00 0.0 37.85 5.24 R
2088 2596 2.007608 TCATCATCGTCGTCGTCTTCT 58.992 47.619 1.33 0.0 38.33 2.85 R
2579 3123 1.002142 CGAGTTGACCGGCGTGATATA 60.002 52.381 6.01 0.0 0.00 0.86 R
3075 3860 0.320073 CAAACACCGGCTCGACCTTA 60.320 55.000 0.00 0.0 35.61 2.69 R
4784 5919 0.732880 CTCGAGTGTCGCGTGGAAAT 60.733 55.000 5.77 0.0 40.21 2.17 R
4817 5952 1.409412 CTCCGCGGTCTCAATTATCG 58.591 55.000 27.15 0.0 0.00 2.92 R
5008 6163 1.717791 CCTGCACACACACACACCAG 61.718 60.000 0.00 0.0 0.00 4.00 R
5392 7152 1.961277 GACAGCACAGGTTCACCGG 60.961 63.158 0.00 0.0 42.08 5.28 R
6858 9576 0.099436 CTTGCTCGCCCTAATGCAAC 59.901 55.000 0.00 0.0 39.98 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.179073 AATGCCGGTGATCTCCTTCG 60.179 55.000 11.86 0.00 0.00 3.79
128 129 0.393537 GGAGGTTGGATGAGGCACTG 60.394 60.000 0.00 0.00 41.55 3.66
150 151 4.470664 TGGTCGGCCCTAGAGTTTAAATAA 59.529 41.667 2.12 0.00 0.00 1.40
151 152 4.813161 GGTCGGCCCTAGAGTTTAAATAAC 59.187 45.833 0.00 0.00 0.00 1.89
153 154 4.160252 TCGGCCCTAGAGTTTAAATAACGT 59.840 41.667 0.00 0.00 0.00 3.99
154 155 4.505556 CGGCCCTAGAGTTTAAATAACGTC 59.494 45.833 0.00 0.00 0.00 4.34
155 156 4.505556 GGCCCTAGAGTTTAAATAACGTCG 59.494 45.833 0.00 0.00 0.00 5.12
157 158 5.679638 GCCCTAGAGTTTAAATAACGTCGGA 60.680 44.000 0.00 0.00 0.00 4.55
158 159 6.510536 CCCTAGAGTTTAAATAACGTCGGAT 58.489 40.000 0.00 0.00 0.00 4.18
159 160 7.651808 CCCTAGAGTTTAAATAACGTCGGATA 58.348 38.462 0.00 0.00 0.00 2.59
178 180 4.069232 CAGGGCAAGCGACGAGGA 62.069 66.667 0.00 0.00 0.00 3.71
207 209 1.678101 GTGGGCAGCAAATAGATGGAC 59.322 52.381 0.00 0.00 33.21 4.02
208 210 0.947244 GGGCAGCAAATAGATGGACG 59.053 55.000 0.00 0.00 33.21 4.79
211 213 2.555199 GCAGCAAATAGATGGACGAGT 58.445 47.619 0.00 0.00 33.21 4.18
237 239 0.670854 GGAGCAGGTTCCTCGACAAC 60.671 60.000 0.00 0.00 34.27 3.32
261 263 4.080015 CCCACATGTTTAATGTAGGGAGGA 60.080 45.833 15.30 0.00 40.04 3.71
295 297 1.063174 GTCGATTGAACATGGAGCAGC 59.937 52.381 0.00 0.00 0.00 5.25
337 340 2.591429 CAACACTGTCTGCCGGCA 60.591 61.111 30.59 30.59 0.00 5.69
338 341 2.591715 AACACTGTCTGCCGGCAC 60.592 61.111 29.03 18.49 0.00 5.01
339 342 3.399105 AACACTGTCTGCCGGCACA 62.399 57.895 29.03 22.48 0.00 4.57
340 343 3.349006 CACTGTCTGCCGGCACAC 61.349 66.667 29.03 27.31 0.00 3.82
353 356 1.423845 GCACACCGCTTCAATACCG 59.576 57.895 0.00 0.00 37.77 4.02
357 360 3.098555 CCGCTTCAATACCGGTGC 58.901 61.111 19.93 10.11 37.36 5.01
370 373 2.241880 CGGTGCGACGTGAAAGGTT 61.242 57.895 0.00 0.00 33.50 3.50
394 397 2.272146 GCTCTGGGCGGGAATGAA 59.728 61.111 0.00 0.00 0.00 2.57
442 932 6.128172 GGCGCTGACATAAGCAGATATTATTT 60.128 38.462 7.64 0.00 43.73 1.40
443 933 6.958193 GCGCTGACATAAGCAGATATTATTTC 59.042 38.462 0.00 0.00 43.73 2.17
445 935 9.358872 CGCTGACATAAGCAGATATTATTTCTA 57.641 33.333 0.00 0.00 43.73 2.10
647 1144 0.738389 ACACACAACTTTGCTTCCCG 59.262 50.000 0.00 0.00 0.00 5.14
904 1406 5.290386 CAGATCTGTCGGTTTCTATAACCC 58.710 45.833 14.95 0.00 36.99 4.11
1325 1830 2.738521 CCACGACAACCGCCTCAG 60.739 66.667 0.00 0.00 43.32 3.35
1444 1949 2.922503 TCCCGAGGCTGCAGAACA 60.923 61.111 20.43 0.00 0.00 3.18
2556 3100 3.181537 CGCTGCGTGGTAAGTAAAAGTAC 60.182 47.826 14.93 0.00 0.00 2.73
2573 3117 3.208594 AGTACCACCGGTCAACTTTTTC 58.791 45.455 2.59 0.00 37.09 2.29
2658 3207 6.157994 TCCTGGTAGTATAACTTGAAGCCAAT 59.842 38.462 0.00 0.00 0.00 3.16
2675 3225 5.774630 AGCCAATCTCGCTAGAATAGTAAC 58.225 41.667 0.00 0.00 41.93 2.50
2701 3251 9.862371 CTCATCTTAATAGAGTGTGTGTTAGTT 57.138 33.333 0.00 0.00 32.92 2.24
2751 3303 5.345609 ACGTATTAAATGCACGACAACAA 57.654 34.783 0.00 0.00 38.96 2.83
2843 3399 7.591421 TGATGACATATGGCAAGAATTTCAT 57.409 32.000 16.92 7.33 36.16 2.57
2849 3411 6.608405 ACATATGGCAAGAATTTCATGGAAGA 59.392 34.615 7.80 0.00 0.00 2.87
2912 3691 8.565416 GGTATGGTTTCTCCTTATTTTAATCCG 58.435 37.037 0.00 0.00 37.07 4.18
2922 3701 5.413213 CCTTATTTTAATCCGTGACACACCA 59.587 40.000 6.37 0.00 0.00 4.17
2923 3702 6.094881 CCTTATTTTAATCCGTGACACACCAT 59.905 38.462 6.37 0.00 0.00 3.55
2924 3703 5.560966 ATTTTAATCCGTGACACACCATC 57.439 39.130 6.37 0.00 0.00 3.51
2925 3704 3.686916 TTAATCCGTGACACACCATCA 57.313 42.857 6.37 0.00 0.00 3.07
2926 3705 2.559698 AATCCGTGACACACCATCAA 57.440 45.000 6.37 0.00 0.00 2.57
2932 3711 4.454161 TCCGTGACACACCATCAAATAAAG 59.546 41.667 6.37 0.00 0.00 1.85
2979 3764 1.274475 CCCCTCCTTACCCTCCTCTTT 60.274 57.143 0.00 0.00 0.00 2.52
3003 3788 0.738762 CTCCCTACTCGTCGTCGTCA 60.739 60.000 1.33 0.00 38.33 4.35
3048 3833 0.533951 CAGCAGGGCATTTTCCTTCC 59.466 55.000 0.00 0.00 31.06 3.46
3061 3846 0.991146 TCCTTCCCATGCAGCTAACA 59.009 50.000 0.00 0.00 0.00 2.41
3075 3860 1.990563 GCTAACAATGTCTACGCGTGT 59.009 47.619 24.59 6.91 0.00 4.49
3104 3889 1.451337 CCGGTGTTTGCACATGGTCA 61.451 55.000 0.00 0.00 46.95 4.02
3110 3895 5.291178 GTGTTTGCACATGGTCAACCAGT 62.291 47.826 8.06 3.62 44.64 4.00
3198 3983 1.985116 GGCCCCTCTCAGACGTCTT 60.985 63.158 17.26 0.00 0.00 3.01
3205 3990 1.751924 CTCTCAGACGTCTTTAGGGGG 59.248 57.143 17.26 4.11 0.00 5.40
3214 3999 2.537143 GTCTTTAGGGGGACTCTGACA 58.463 52.381 0.00 0.00 0.00 3.58
3220 4005 2.105128 GGGACTCTGACATCGGCG 59.895 66.667 0.00 0.00 0.00 6.46
3221 4006 2.415608 GGGACTCTGACATCGGCGA 61.416 63.158 13.87 13.87 0.00 5.54
3290 4075 0.392998 AGTGTGTTGATCGATGGGGC 60.393 55.000 0.54 0.00 0.00 5.80
3291 4076 0.676466 GTGTGTTGATCGATGGGGCA 60.676 55.000 0.54 0.00 0.00 5.36
3296 4081 4.996434 GATCGATGGGGCAGCGGG 62.996 72.222 0.54 0.00 43.69 6.13
3382 4170 2.458610 CGTCGGATCGGTCTCGTGA 61.459 63.158 0.00 0.00 37.69 4.35
3391 4179 1.592223 GGTCTCGTGAGGAGGTTGG 59.408 63.158 1.99 0.00 43.34 3.77
3394 4182 1.913762 CTCGTGAGGAGGTTGGGGT 60.914 63.158 0.00 0.00 39.22 4.95
3399 4187 0.195096 TGAGGAGGTTGGGGTAAGGT 59.805 55.000 0.00 0.00 0.00 3.50
3401 4189 1.001269 GGAGGTTGGGGTAAGGTGC 60.001 63.158 0.00 0.00 0.00 5.01
3471 4259 4.227134 CTCCATCGTGGGCCGGAG 62.227 72.222 5.05 9.62 38.32 4.63
3500 4291 1.303309 GCATGTAGGTGGTGCATCTC 58.697 55.000 0.00 0.00 38.68 2.75
3501 4292 1.407299 GCATGTAGGTGGTGCATCTCA 60.407 52.381 0.00 0.00 38.68 3.27
3503 4294 0.904649 TGTAGGTGGTGCATCTCAGG 59.095 55.000 0.00 0.00 0.00 3.86
3506 4297 2.352422 GTGGTGCATCTCAGGGCA 59.648 61.111 0.00 0.00 37.77 5.36
3508 4299 2.226315 TGGTGCATCTCAGGGCAGT 61.226 57.895 0.00 0.00 41.35 4.40
3520 4311 0.838122 AGGGCAGTGACTGTTAGGCT 60.838 55.000 14.82 0.00 33.43 4.58
3531 4322 1.812571 CTGTTAGGCTCAAACGGCAAT 59.187 47.619 0.00 0.00 0.00 3.56
3594 4385 1.345415 GTGTTGTCTTCCCTTCCGGTA 59.655 52.381 0.00 0.00 0.00 4.02
3607 4398 3.128764 CCTTCCGGTAATTTCTCCTTTGC 59.871 47.826 0.00 0.00 0.00 3.68
3614 4405 0.114954 ATTTCTCCTTTGCCCTGCCA 59.885 50.000 0.00 0.00 0.00 4.92
3635 4426 4.260907 CCAAATTCTATGTGAGCATGACGG 60.261 45.833 0.00 0.00 36.58 4.79
3671 4462 7.417911 GGACAATGACTATGGTGAGAGACATAA 60.418 40.741 0.00 0.00 0.00 1.90
3676 4467 5.772004 ACTATGGTGAGAGACATAACTCCT 58.228 41.667 0.00 0.00 37.60 3.69
3679 4470 5.452341 TGGTGAGAGACATAACTCCTAGA 57.548 43.478 0.00 0.00 37.60 2.43
3687 4478 6.322712 AGAGACATAACTCCTAGATGACAACC 59.677 42.308 0.00 0.00 37.60 3.77
3689 4480 5.030147 ACATAACTCCTAGATGACAACCCA 58.970 41.667 0.00 0.00 0.00 4.51
3690 4481 5.667626 ACATAACTCCTAGATGACAACCCAT 59.332 40.000 0.00 0.00 0.00 4.00
3691 4482 4.494091 AACTCCTAGATGACAACCCATG 57.506 45.455 0.00 0.00 0.00 3.66
3693 4484 4.302067 ACTCCTAGATGACAACCCATGAT 58.698 43.478 0.00 0.00 0.00 2.45
3694 4485 4.346418 ACTCCTAGATGACAACCCATGATC 59.654 45.833 0.00 0.00 0.00 2.92
3695 4486 4.560739 TCCTAGATGACAACCCATGATCT 58.439 43.478 0.00 0.00 0.00 2.75
3696 4487 5.715921 TCCTAGATGACAACCCATGATCTA 58.284 41.667 0.00 0.00 0.00 1.98
3697 4488 6.143206 TCCTAGATGACAACCCATGATCTAA 58.857 40.000 0.00 0.00 29.36 2.10
3698 4489 6.042093 TCCTAGATGACAACCCATGATCTAAC 59.958 42.308 0.00 0.00 29.36 2.34
3699 4490 5.965033 AGATGACAACCCATGATCTAACT 57.035 39.130 0.00 0.00 0.00 2.24
3700 4491 5.923204 AGATGACAACCCATGATCTAACTC 58.077 41.667 0.00 0.00 0.00 3.01
3701 4492 4.123497 TGACAACCCATGATCTAACTCG 57.877 45.455 0.00 0.00 0.00 4.18
3702 4493 2.866762 GACAACCCATGATCTAACTCGC 59.133 50.000 0.00 0.00 0.00 5.03
3703 4494 2.236146 ACAACCCATGATCTAACTCGCA 59.764 45.455 0.00 0.00 0.00 5.10
3704 4495 3.118261 ACAACCCATGATCTAACTCGCAT 60.118 43.478 0.00 0.00 0.00 4.73
3705 4496 3.117491 ACCCATGATCTAACTCGCATG 57.883 47.619 0.00 0.00 38.22 4.06
3706 4497 2.700371 ACCCATGATCTAACTCGCATGA 59.300 45.455 0.00 0.00 40.29 3.07
3707 4498 3.326006 ACCCATGATCTAACTCGCATGAT 59.674 43.478 0.00 0.00 40.29 2.45
3708 4499 4.528206 ACCCATGATCTAACTCGCATGATA 59.472 41.667 0.00 0.00 40.29 2.15
3709 4500 5.012046 ACCCATGATCTAACTCGCATGATAA 59.988 40.000 0.00 0.00 40.29 1.75
3710 4501 5.579904 CCCATGATCTAACTCGCATGATAAG 59.420 44.000 0.00 0.00 40.29 1.73
3711 4502 5.579904 CCATGATCTAACTCGCATGATAAGG 59.420 44.000 0.00 0.00 40.29 2.69
3712 4503 4.560128 TGATCTAACTCGCATGATAAGGC 58.440 43.478 0.00 0.00 0.00 4.35
3713 4504 4.281941 TGATCTAACTCGCATGATAAGGCT 59.718 41.667 0.00 0.00 0.00 4.58
3714 4505 3.982475 TCTAACTCGCATGATAAGGCTG 58.018 45.455 0.00 0.00 0.00 4.85
3715 4506 1.303309 AACTCGCATGATAAGGCTGC 58.697 50.000 0.00 0.00 0.00 5.25
3716 4507 0.467384 ACTCGCATGATAAGGCTGCT 59.533 50.000 0.00 0.00 33.75 4.24
3717 4508 1.134280 ACTCGCATGATAAGGCTGCTT 60.134 47.619 0.00 0.00 33.75 3.91
3718 4509 1.530293 CTCGCATGATAAGGCTGCTTC 59.470 52.381 0.00 0.00 33.75 3.86
3719 4510 0.234106 CGCATGATAAGGCTGCTTCG 59.766 55.000 0.00 0.00 33.75 3.79
3722 4513 2.032204 GCATGATAAGGCTGCTTCGAAG 60.032 50.000 21.02 21.02 33.15 3.79
3730 4521 0.178068 GCTGCTTCGAAGTCCCCATA 59.822 55.000 25.24 4.22 0.00 2.74
3732 4523 2.487934 CTGCTTCGAAGTCCCCATATG 58.512 52.381 25.24 0.00 0.00 1.78
3733 4524 1.837439 TGCTTCGAAGTCCCCATATGT 59.163 47.619 25.24 0.00 0.00 2.29
3735 4526 3.279434 GCTTCGAAGTCCCCATATGTTT 58.721 45.455 25.24 0.00 0.00 2.83
3748 4539 6.011981 TCCCCATATGTTTACCTTCTTGAAGT 60.012 38.462 9.21 1.49 0.00 3.01
3758 4549 5.072040 ACCTTCTTGAAGTTGTTGGTTTG 57.928 39.130 9.21 0.00 0.00 2.93
3760 4551 5.245075 ACCTTCTTGAAGTTGTTGGTTTGAA 59.755 36.000 9.21 0.00 0.00 2.69
3761 4552 5.807011 CCTTCTTGAAGTTGTTGGTTTGAAG 59.193 40.000 9.21 0.00 0.00 3.02
3762 4553 6.350110 CCTTCTTGAAGTTGTTGGTTTGAAGA 60.350 38.462 9.21 0.00 31.76 2.87
3763 4554 6.773976 TCTTGAAGTTGTTGGTTTGAAGAT 57.226 33.333 0.00 0.00 0.00 2.40
3764 4555 7.873719 TCTTGAAGTTGTTGGTTTGAAGATA 57.126 32.000 0.00 0.00 0.00 1.98
3767 4558 7.581213 TGAAGTTGTTGGTTTGAAGATATGT 57.419 32.000 0.00 0.00 0.00 2.29
3773 4564 9.092876 GTTGTTGGTTTGAAGATATGTTTTGAA 57.907 29.630 0.00 0.00 0.00 2.69
3788 4579 4.043561 TGTTTTGAAGGTTATAGGCCAGGA 59.956 41.667 5.01 0.00 0.00 3.86
3801 4595 0.105039 GCCAGGATCTAACGTCTGGG 59.895 60.000 17.54 3.34 45.00 4.45
3804 4601 1.683917 CAGGATCTAACGTCTGGGGAG 59.316 57.143 0.00 0.00 0.00 4.30
3810 4607 1.833787 TAACGTCTGGGGAGCCAACC 61.834 60.000 0.00 0.00 0.00 3.77
3824 4621 0.950836 CCAACCGACTTTGACATGCA 59.049 50.000 0.00 0.00 0.00 3.96
3827 4624 1.967319 ACCGACTTTGACATGCAAGT 58.033 45.000 0.00 0.00 37.87 3.16
3835 4632 4.281688 ACTTTGACATGCAAGTGGCTATTT 59.718 37.500 0.00 0.00 45.15 1.40
3836 4633 4.439305 TTGACATGCAAGTGGCTATTTC 57.561 40.909 0.00 0.00 45.15 2.17
3848 4645 4.835056 AGTGGCTATTTCTTTTTGAAGGCT 59.165 37.500 0.00 0.00 35.89 4.58
3856 4653 9.965824 CTATTTCTTTTTGAAGGCTTTGTCTTA 57.034 29.630 0.00 0.00 35.89 2.10
3860 4657 5.438761 TTTTGAAGGCTTTGTCTTAGAGC 57.561 39.130 0.00 0.00 35.71 4.09
3861 4658 4.357918 TTGAAGGCTTTGTCTTAGAGCT 57.642 40.909 0.00 0.00 36.66 4.09
3864 4661 4.516698 TGAAGGCTTTGTCTTAGAGCTTTG 59.483 41.667 0.00 0.00 36.10 2.77
3865 4662 2.816672 AGGCTTTGTCTTAGAGCTTTGC 59.183 45.455 0.00 0.00 36.66 3.68
3866 4663 2.413371 GGCTTTGTCTTAGAGCTTTGCG 60.413 50.000 0.00 0.00 36.66 4.85
3867 4664 2.224314 GCTTTGTCTTAGAGCTTTGCGT 59.776 45.455 0.00 0.00 33.72 5.24
3870 4667 1.618837 TGTCTTAGAGCTTTGCGTCCT 59.381 47.619 0.00 0.00 0.00 3.85
3873 4670 3.067106 TCTTAGAGCTTTGCGTCCTTTG 58.933 45.455 0.00 0.00 0.00 2.77
3877 4674 0.947244 AGCTTTGCGTCCTTTGTCTG 59.053 50.000 0.00 0.00 0.00 3.51
3878 4675 0.663153 GCTTTGCGTCCTTTGTCTGT 59.337 50.000 0.00 0.00 0.00 3.41
3879 4676 1.065551 GCTTTGCGTCCTTTGTCTGTT 59.934 47.619 0.00 0.00 0.00 3.16
3881 4678 3.607078 GCTTTGCGTCCTTTGTCTGTTAG 60.607 47.826 0.00 0.00 0.00 2.34
3896 4693 8.771920 TTGTCTGTTAGTAACATATCACCTTG 57.228 34.615 15.91 1.98 41.26 3.61
3925 4722 2.614057 GTGGTAGGATTTGAAGATGCCG 59.386 50.000 0.00 0.00 0.00 5.69
3926 4723 2.238646 TGGTAGGATTTGAAGATGCCGT 59.761 45.455 0.00 0.00 0.00 5.68
3954 4751 6.545666 CGAGGCATGTTCTATCTATAGGATCT 59.454 42.308 0.00 0.00 35.98 2.75
3955 4752 7.255104 CGAGGCATGTTCTATCTATAGGATCTC 60.255 44.444 0.00 0.00 35.98 2.75
3956 4753 6.838612 AGGCATGTTCTATCTATAGGATCTCC 59.161 42.308 0.00 0.00 35.98 3.71
3957 4754 6.041523 GGCATGTTCTATCTATAGGATCTCCC 59.958 46.154 0.00 0.00 35.98 4.30
3958 4755 6.041523 GCATGTTCTATCTATAGGATCTCCCC 59.958 46.154 0.00 0.00 35.98 4.81
3959 4756 5.756918 TGTTCTATCTATAGGATCTCCCCG 58.243 45.833 0.00 0.00 35.98 5.73
3963 4760 7.520797 TCTATCTATAGGATCTCCCCGTAAA 57.479 40.000 0.00 0.00 35.98 2.01
3965 4762 8.566979 TCTATCTATAGGATCTCCCCGTAAAAT 58.433 37.037 0.00 0.00 35.98 1.82
3967 4764 5.956563 TCTATAGGATCTCCCCGTAAAATCC 59.043 44.000 0.00 0.00 36.87 3.01
3968 4765 2.055579 AGGATCTCCCCGTAAAATCCC 58.944 52.381 0.00 0.00 37.24 3.85
3969 4766 1.772453 GGATCTCCCCGTAAAATCCCA 59.228 52.381 0.00 0.00 31.56 4.37
3971 4768 1.961133 TCTCCCCGTAAAATCCCACT 58.039 50.000 0.00 0.00 0.00 4.00
3972 4769 2.271777 TCTCCCCGTAAAATCCCACTT 58.728 47.619 0.00 0.00 0.00 3.16
3982 4902 8.833493 CCCGTAAAATCCCACTTAAACTATAAG 58.167 37.037 0.00 0.00 0.00 1.73
3983 4903 9.387257 CCGTAAAATCCCACTTAAACTATAAGT 57.613 33.333 0.00 0.00 38.20 2.24
3994 4914 9.226606 CACTTAAACTATAAGTGGTTGGATTCA 57.773 33.333 16.76 0.00 46.32 2.57
3996 4916 8.801882 TTAAACTATAAGTGGTTGGATTCAGG 57.198 34.615 0.00 0.00 0.00 3.86
4012 4932 6.494491 TGGATTCAGGTCAAATGTCTCAAAAT 59.506 34.615 0.00 0.00 0.00 1.82
4013 4933 7.015487 TGGATTCAGGTCAAATGTCTCAAAATT 59.985 33.333 0.00 0.00 0.00 1.82
4014 4934 7.543520 GGATTCAGGTCAAATGTCTCAAAATTC 59.456 37.037 0.00 0.00 0.00 2.17
4015 4935 6.000891 TCAGGTCAAATGTCTCAAAATTCG 57.999 37.500 0.00 0.00 0.00 3.34
4016 4936 5.762711 TCAGGTCAAATGTCTCAAAATTCGA 59.237 36.000 0.00 0.00 0.00 3.71
4017 4937 5.853282 CAGGTCAAATGTCTCAAAATTCGAC 59.147 40.000 0.00 0.00 0.00 4.20
4018 4938 5.765182 AGGTCAAATGTCTCAAAATTCGACT 59.235 36.000 0.00 0.00 0.00 4.18
4019 4939 6.934645 AGGTCAAATGTCTCAAAATTCGACTA 59.065 34.615 0.00 0.00 0.00 2.59
4020 4940 7.118390 AGGTCAAATGTCTCAAAATTCGACTAG 59.882 37.037 0.00 0.00 0.00 2.57
4021 4941 7.117812 GGTCAAATGTCTCAAAATTCGACTAGA 59.882 37.037 0.00 0.00 0.00 2.43
4022 4942 8.660373 GTCAAATGTCTCAAAATTCGACTAGAT 58.340 33.333 0.00 0.00 0.00 1.98
4023 4943 9.219603 TCAAATGTCTCAAAATTCGACTAGATT 57.780 29.630 0.00 0.00 0.00 2.40
4024 4944 9.270576 CAAATGTCTCAAAATTCGACTAGATTG 57.729 33.333 0.00 0.00 0.00 2.67
4026 4946 7.582435 TGTCTCAAAATTCGACTAGATTGAC 57.418 36.000 0.00 0.00 0.00 3.18
4027 4947 7.151976 TGTCTCAAAATTCGACTAGATTGACA 58.848 34.615 0.00 0.00 0.00 3.58
4028 4948 7.329471 TGTCTCAAAATTCGACTAGATTGACAG 59.671 37.037 0.00 0.00 0.00 3.51
4032 4957 4.927978 ATTCGACTAGATTGACAGAGGG 57.072 45.455 0.00 0.00 0.00 4.30
4047 4972 5.364446 TGACAGAGGGTAGAAACAAGTGTAA 59.636 40.000 0.00 0.00 0.00 2.41
4048 4973 6.126997 TGACAGAGGGTAGAAACAAGTGTAAA 60.127 38.462 0.00 0.00 0.00 2.01
4049 4974 6.289064 ACAGAGGGTAGAAACAAGTGTAAAG 58.711 40.000 0.00 0.00 0.00 1.85
4050 4975 6.126854 ACAGAGGGTAGAAACAAGTGTAAAGT 60.127 38.462 0.00 0.00 0.00 2.66
4054 4979 7.970102 AGGGTAGAAACAAGTGTAAAGTATGA 58.030 34.615 0.00 0.00 0.00 2.15
4070 4995 7.898014 AAAGTATGATTGGTAGAAAATCCCC 57.102 36.000 0.00 0.00 33.85 4.81
4071 4996 5.621193 AGTATGATTGGTAGAAAATCCCCG 58.379 41.667 0.00 0.00 33.85 5.73
4072 4997 3.290948 TGATTGGTAGAAAATCCCCGG 57.709 47.619 0.00 0.00 33.85 5.73
4073 4998 2.578940 TGATTGGTAGAAAATCCCCGGT 59.421 45.455 0.00 0.00 33.85 5.28
4104 5029 2.668280 GCTCTCGGTGGCAAACGAC 61.668 63.158 0.00 0.00 35.04 4.34
4106 5031 2.030562 CTCGGTGGCAAACGACCT 59.969 61.111 0.00 0.00 35.04 3.85
4107 5032 2.280524 TCGGTGGCAAACGACCTG 60.281 61.111 0.00 0.00 33.69 4.00
4189 5126 0.882042 GGCGATTCGATCCACTGCAT 60.882 55.000 10.88 0.00 0.00 3.96
4237 5174 4.602259 ACCGCACCGACCTGTGTG 62.602 66.667 0.00 0.00 44.40 3.82
4351 5295 6.470557 AAATCATTTTCGCCTCATGTTTTG 57.529 33.333 0.00 0.00 0.00 2.44
4358 5302 1.448985 GCCTCATGTTTTGGCTCGTA 58.551 50.000 12.11 0.00 43.05 3.43
4359 5303 1.398390 GCCTCATGTTTTGGCTCGTAG 59.602 52.381 12.11 0.00 43.05 3.51
4360 5304 2.009774 CCTCATGTTTTGGCTCGTAGG 58.990 52.381 0.00 0.00 0.00 3.18
4425 5539 1.139058 CCAAGGGAGTTGCTAGCGTAT 59.861 52.381 10.77 0.00 34.45 3.06
4520 5638 7.818446 TGAATATACTGCACCAAAAACTACGTA 59.182 33.333 0.00 0.00 0.00 3.57
4551 5669 2.220133 GTGTACACGCACACTTTACAGG 59.780 50.000 10.84 0.00 44.41 4.00
4617 5744 2.161012 CCAGCACTTGCACAATACTGAG 59.839 50.000 3.62 0.00 45.16 3.35
4754 5889 4.649674 ACGGCCTAACAGAATGATCTTCTA 59.350 41.667 0.00 0.00 39.69 2.10
4763 5898 7.385894 ACAGAATGATCTTCTAGGGCTAAAT 57.614 36.000 6.99 0.00 39.69 1.40
4771 5906 6.875972 TCTTCTAGGGCTAAATATGATCCC 57.124 41.667 0.00 0.00 37.24 3.85
4773 5908 4.030913 TCTAGGGCTAAATATGATCCCGG 58.969 47.826 0.00 0.00 41.76 5.73
4776 5911 3.009143 AGGGCTAAATATGATCCCGGAAC 59.991 47.826 0.73 0.00 41.76 3.62
4913 6060 1.069823 ACTGGGTGATCGATGATGAGC 59.930 52.381 0.54 0.00 0.00 4.26
5003 6158 1.069022 CAACTTTGTGAGGACGCCATG 60.069 52.381 0.00 0.00 0.00 3.66
5008 6163 2.309528 TGTGAGGACGCCATGATAAC 57.690 50.000 0.00 0.00 0.00 1.89
5016 6171 1.737838 CGCCATGATAACTGGTGTGT 58.262 50.000 0.00 0.00 39.05 3.72
5040 6195 2.263540 GCAGGCAGCAATGGTTGG 59.736 61.111 0.00 0.00 44.79 3.77
5041 6196 2.576832 GCAGGCAGCAATGGTTGGT 61.577 57.895 0.00 0.00 44.79 3.67
5042 6197 2.051941 CAGGCAGCAATGGTTGGTT 58.948 52.632 0.00 0.00 39.79 3.67
5043 6198 0.037975 CAGGCAGCAATGGTTGGTTC 60.038 55.000 0.00 0.00 39.79 3.62
5102 6264 6.254281 ACAATTAGTACCATTGTCAAGTGC 57.746 37.500 13.04 0.00 40.17 4.40
5186 6354 1.532868 GTCAGTGTCCATGAACAGTGC 59.467 52.381 14.62 6.78 45.93 4.40
5324 7084 4.517285 TCTTACTCAGAATCAATGCCCAC 58.483 43.478 0.00 0.00 0.00 4.61
5376 7136 3.061295 GCTAACTTTTAGTTACCGCGTCC 59.939 47.826 4.92 0.00 39.51 4.79
5476 7236 1.287815 CGTACCTCCACGAGTGCAA 59.712 57.895 0.00 0.00 44.69 4.08
5665 7428 4.077184 CCCCTACACGAAGCCGCA 62.077 66.667 0.00 0.00 39.95 5.69
5999 7762 0.984230 TGCCCAAGAAGGAGATCGTT 59.016 50.000 0.00 0.00 41.22 3.85
6087 7850 1.300233 GCCGACAGCCTCGATAAGG 60.300 63.158 3.00 0.00 46.14 2.69
6100 7863 0.384669 GATAAGGTCGGGTCGTGAGG 59.615 60.000 0.00 0.00 0.00 3.86
6113 7876 0.249615 CGTGAGGACGGATGCATCAT 60.250 55.000 27.25 15.24 42.18 2.45
6115 7878 0.533531 TGAGGACGGATGCATCATGC 60.534 55.000 27.25 19.13 45.29 4.06
6170 7936 1.202371 TGTTCGTGACAAAGCTCGTCT 60.202 47.619 15.14 0.00 34.69 4.18
6172 7938 0.318699 TCGTGACAAAGCTCGTCTGG 60.319 55.000 15.14 8.52 34.37 3.86
6195 7961 5.300539 GGGAAGTCTTCTTTTCTTGAGCTTT 59.699 40.000 12.31 0.00 33.64 3.51
6197 7963 6.384258 AAGTCTTCTTTTCTTGAGCTTTCC 57.616 37.500 0.00 0.00 0.00 3.13
6198 7964 5.689835 AGTCTTCTTTTCTTGAGCTTTCCT 58.310 37.500 0.00 0.00 0.00 3.36
6201 7967 5.532779 TCTTCTTTTCTTGAGCTTTCCTTCC 59.467 40.000 0.00 0.00 0.00 3.46
6202 7968 5.053978 TCTTTTCTTGAGCTTTCCTTCCT 57.946 39.130 0.00 0.00 0.00 3.36
6203 7969 5.066593 TCTTTTCTTGAGCTTTCCTTCCTC 58.933 41.667 0.00 0.00 0.00 3.71
6204 7970 4.713792 TTTCTTGAGCTTTCCTTCCTCT 57.286 40.909 0.00 0.00 0.00 3.69
6205 7971 3.971245 TCTTGAGCTTTCCTTCCTCTC 57.029 47.619 0.00 0.00 0.00 3.20
6206 7972 3.515562 TCTTGAGCTTTCCTTCCTCTCT 58.484 45.455 0.00 0.00 0.00 3.10
6207 7973 3.260380 TCTTGAGCTTTCCTTCCTCTCTG 59.740 47.826 0.00 0.00 0.00 3.35
6393 9111 3.427692 CGATGCATCGCAGTTTAGC 57.572 52.632 33.70 0.12 43.65 3.09
6411 9129 0.390340 GCTGAATGTCAGTCGCCTGA 60.390 55.000 7.08 0.00 45.94 3.86
6423 9141 6.122850 TCAGTCGCCTGAAAATGATATTTG 57.877 37.500 0.00 0.00 44.67 2.32
6424 9142 5.066375 TCAGTCGCCTGAAAATGATATTTGG 59.934 40.000 0.00 0.00 44.67 3.28
6425 9143 4.339247 AGTCGCCTGAAAATGATATTTGGG 59.661 41.667 0.00 0.00 0.00 4.12
6426 9144 4.097892 GTCGCCTGAAAATGATATTTGGGT 59.902 41.667 0.00 0.00 0.00 4.51
6427 9145 4.709397 TCGCCTGAAAATGATATTTGGGTT 59.291 37.500 0.00 0.00 0.00 4.11
6434 9152 8.746052 TGAAAATGATATTTGGGTTAGTCGAT 57.254 30.769 0.00 0.00 0.00 3.59
6446 9164 4.335315 GGGTTAGTCGATTTTGCATGATGA 59.665 41.667 0.00 0.00 0.00 2.92
6454 9172 3.388345 TTTTGCATGATGAAAGCAGCA 57.612 38.095 0.00 0.00 45.54 4.41
6457 9175 0.866061 GCATGATGAAAGCAGCAGCG 60.866 55.000 0.00 0.00 44.57 5.18
6459 9177 0.679002 ATGATGAAAGCAGCAGCGGT 60.679 50.000 0.00 0.00 44.57 5.68
6469 9187 0.667487 CAGCAGCGGTCGAAGAGAAA 60.667 55.000 0.00 0.00 36.95 2.52
6470 9188 0.033504 AGCAGCGGTCGAAGAGAAAA 59.966 50.000 0.00 0.00 36.95 2.29
6485 9203 3.967715 AAAAAGGAGTCGGCTCGC 58.032 55.556 11.57 4.10 42.53 5.03
6486 9204 2.027625 AAAAAGGAGTCGGCTCGCG 61.028 57.895 11.57 0.00 42.53 5.87
6487 9205 3.934391 AAAAGGAGTCGGCTCGCGG 62.934 63.158 11.57 0.00 42.53 6.46
6490 9208 4.856607 GGAGTCGGCTCGCGGAAG 62.857 72.222 11.57 0.00 42.53 3.46
6491 9209 3.812019 GAGTCGGCTCGCGGAAGA 61.812 66.667 6.13 0.00 31.39 2.87
6492 9210 3.338126 GAGTCGGCTCGCGGAAGAA 62.338 63.158 6.13 0.00 31.39 2.52
6493 9211 2.881352 GTCGGCTCGCGGAAGAAG 60.881 66.667 6.13 0.00 0.00 2.85
6494 9212 4.796231 TCGGCTCGCGGAAGAAGC 62.796 66.667 6.13 7.32 39.71 3.86
6496 9214 3.191539 GGCTCGCGGAAGAAGCAG 61.192 66.667 17.13 1.11 41.46 4.24
6497 9215 3.858989 GCTCGCGGAAGAAGCAGC 61.859 66.667 6.13 0.32 40.04 5.25
6498 9216 2.433145 CTCGCGGAAGAAGCAGCA 60.433 61.111 6.13 0.00 34.19 4.41
6499 9217 2.734673 CTCGCGGAAGAAGCAGCAC 61.735 63.158 6.13 0.00 34.19 4.40
6500 9218 3.793144 CGCGGAAGAAGCAGCACC 61.793 66.667 0.00 0.00 34.19 5.01
6501 9219 2.669569 GCGGAAGAAGCAGCACCA 60.670 61.111 0.00 0.00 34.19 4.17
6502 9220 2.042831 GCGGAAGAAGCAGCACCAT 61.043 57.895 0.00 0.00 34.19 3.55
6503 9221 1.986575 GCGGAAGAAGCAGCACCATC 61.987 60.000 0.00 0.00 34.19 3.51
6504 9222 0.392193 CGGAAGAAGCAGCACCATCT 60.392 55.000 0.00 0.00 0.00 2.90
6505 9223 1.134699 CGGAAGAAGCAGCACCATCTA 60.135 52.381 0.00 0.00 0.00 1.98
6506 9224 2.559440 GGAAGAAGCAGCACCATCTAG 58.441 52.381 0.00 0.00 0.00 2.43
6507 9225 2.559440 GAAGAAGCAGCACCATCTAGG 58.441 52.381 0.00 0.00 45.67 3.02
6522 9240 6.107901 CCATCTAGGTCTATCTTTGGAAGG 57.892 45.833 0.00 0.00 0.00 3.46
6523 9241 5.512232 CCATCTAGGTCTATCTTTGGAAGGC 60.512 48.000 0.00 0.00 0.00 4.35
6524 9242 4.620723 TCTAGGTCTATCTTTGGAAGGCA 58.379 43.478 0.00 0.00 0.00 4.75
6525 9243 3.922171 AGGTCTATCTTTGGAAGGCAG 57.078 47.619 0.00 0.00 0.00 4.85
6526 9244 2.507471 AGGTCTATCTTTGGAAGGCAGG 59.493 50.000 0.00 0.00 0.00 4.85
6527 9245 2.293170 GTCTATCTTTGGAAGGCAGGC 58.707 52.381 0.00 0.00 0.00 4.85
6528 9246 2.092699 GTCTATCTTTGGAAGGCAGGCT 60.093 50.000 0.00 0.00 0.00 4.58
6529 9247 2.171448 TCTATCTTTGGAAGGCAGGCTC 59.829 50.000 0.00 0.00 0.00 4.70
6530 9248 0.393537 ATCTTTGGAAGGCAGGCTCG 60.394 55.000 0.00 0.00 0.00 5.03
6531 9249 2.672996 TTTGGAAGGCAGGCTCGC 60.673 61.111 0.00 0.00 0.00 5.03
6532 9250 3.196207 TTTGGAAGGCAGGCTCGCT 62.196 57.895 0.00 0.00 0.00 4.93
6533 9251 3.907260 TTGGAAGGCAGGCTCGCTG 62.907 63.158 0.00 0.00 0.00 5.18
6540 9258 3.699894 CAGGCTCGCTGGGTGTCT 61.700 66.667 0.00 0.00 0.00 3.41
6541 9259 2.037367 AGGCTCGCTGGGTGTCTA 59.963 61.111 0.00 0.00 0.00 2.59
6542 9260 1.381872 AGGCTCGCTGGGTGTCTAT 60.382 57.895 0.00 0.00 0.00 1.98
6543 9261 1.068250 GGCTCGCTGGGTGTCTATC 59.932 63.158 0.00 0.00 0.00 2.08
6544 9262 1.395826 GGCTCGCTGGGTGTCTATCT 61.396 60.000 0.00 0.00 0.00 1.98
6545 9263 0.461961 GCTCGCTGGGTGTCTATCTT 59.538 55.000 0.00 0.00 0.00 2.40
6546 9264 1.681793 GCTCGCTGGGTGTCTATCTTA 59.318 52.381 0.00 0.00 0.00 2.10
6547 9265 2.287909 GCTCGCTGGGTGTCTATCTTAG 60.288 54.545 0.00 0.00 0.00 2.18
6548 9266 2.294791 CTCGCTGGGTGTCTATCTTAGG 59.705 54.545 0.00 0.00 0.00 2.69
6549 9267 1.341531 CGCTGGGTGTCTATCTTAGGG 59.658 57.143 0.00 0.00 0.00 3.53
6550 9268 2.399580 GCTGGGTGTCTATCTTAGGGT 58.600 52.381 0.00 0.00 0.00 4.34
6551 9269 2.103263 GCTGGGTGTCTATCTTAGGGTG 59.897 54.545 0.00 0.00 0.00 4.61
6552 9270 2.700897 CTGGGTGTCTATCTTAGGGTGG 59.299 54.545 0.00 0.00 0.00 4.61
6553 9271 1.416772 GGGTGTCTATCTTAGGGTGGC 59.583 57.143 0.00 0.00 0.00 5.01
6554 9272 2.116238 GGTGTCTATCTTAGGGTGGCA 58.884 52.381 0.00 0.00 0.00 4.92
6555 9273 2.504175 GGTGTCTATCTTAGGGTGGCAA 59.496 50.000 0.00 0.00 0.00 4.52
6556 9274 3.432326 GGTGTCTATCTTAGGGTGGCAAG 60.432 52.174 0.00 0.00 0.00 4.01
6557 9275 2.170607 TGTCTATCTTAGGGTGGCAAGC 59.829 50.000 0.00 0.00 0.00 4.01
6558 9276 2.436173 GTCTATCTTAGGGTGGCAAGCT 59.564 50.000 0.00 0.00 0.00 3.74
6559 9277 3.115390 TCTATCTTAGGGTGGCAAGCTT 58.885 45.455 0.00 0.00 0.00 3.74
6560 9278 2.134789 ATCTTAGGGTGGCAAGCTTG 57.865 50.000 22.44 22.44 0.00 4.01
6580 9298 4.367039 TGCTGGGTATCTATTTTAGGGC 57.633 45.455 0.00 0.00 0.00 5.19
6581 9299 3.980698 TGCTGGGTATCTATTTTAGGGCT 59.019 43.478 0.00 0.00 0.00 5.19
6583 9301 4.202472 GCTGGGTATCTATTTTAGGGCTGT 60.202 45.833 0.00 0.00 0.00 4.40
6588 9306 2.568979 TCTATTTTAGGGCTGTGGGGT 58.431 47.619 0.00 0.00 0.00 4.95
6590 9308 1.937191 ATTTTAGGGCTGTGGGGTTG 58.063 50.000 0.00 0.00 0.00 3.77
6591 9309 0.830023 TTTTAGGGCTGTGGGGTTGC 60.830 55.000 0.00 0.00 0.00 4.17
6620 9338 2.681344 ACGGAAAAATATGGAGGTTCGC 59.319 45.455 0.00 0.00 0.00 4.70
6622 9340 3.020984 GGAAAAATATGGAGGTTCGCCA 58.979 45.455 0.00 0.00 40.60 5.69
6640 9358 1.048724 CAGGGTTAGAGGGATGGCGA 61.049 60.000 0.00 0.00 0.00 5.54
6643 9361 0.035458 GGTTAGAGGGATGGCGATGG 59.965 60.000 0.00 0.00 0.00 3.51
6703 9421 2.112815 GGTAGCATGCGGTTGGACC 61.113 63.158 13.01 10.18 34.05 4.46
6712 9430 2.348620 GGTTGGACCGGTGGTACC 59.651 66.667 14.63 12.61 35.18 3.34
6714 9432 1.294459 GTTGGACCGGTGGTACCTC 59.706 63.158 14.63 9.71 35.18 3.85
6715 9433 2.277591 TTGGACCGGTGGTACCTCG 61.278 63.158 14.63 16.18 35.18 4.63
6753 9471 0.631212 ATGAACAGGGGGATGGGAAC 59.369 55.000 0.00 0.00 0.00 3.62
6771 9489 2.457366 ACGAGGTTGAAGAAAGCGAT 57.543 45.000 0.00 0.00 41.32 4.58
6775 9493 3.865745 CGAGGTTGAAGAAAGCGATATGT 59.134 43.478 0.00 0.00 41.32 2.29
6776 9494 4.026475 CGAGGTTGAAGAAAGCGATATGTC 60.026 45.833 0.00 0.00 41.32 3.06
6777 9495 4.832248 AGGTTGAAGAAAGCGATATGTCA 58.168 39.130 0.00 0.00 41.32 3.58
6778 9496 5.431765 AGGTTGAAGAAAGCGATATGTCAT 58.568 37.500 0.00 0.00 41.32 3.06
6780 9498 6.037610 AGGTTGAAGAAAGCGATATGTCATTC 59.962 38.462 0.00 0.00 41.32 2.67
6781 9499 5.641777 TGAAGAAAGCGATATGTCATTCG 57.358 39.130 10.96 10.96 38.37 3.34
6782 9500 5.109210 TGAAGAAAGCGATATGTCATTCGT 58.891 37.500 14.57 0.00 37.66 3.85
6785 9503 6.422776 AGAAAGCGATATGTCATTCGTTTT 57.577 33.333 20.64 20.64 46.56 2.43
6790 9508 6.877855 AGCGATATGTCATTCGTTTTACATC 58.122 36.000 14.57 0.08 37.66 3.06
6793 9511 7.283633 CGATATGTCATTCGTTTTACATCTGG 58.716 38.462 0.00 0.00 34.54 3.86
6806 9524 6.621316 TTTACATCTGGCGACTTAAAACAA 57.379 33.333 0.00 0.00 0.00 2.83
6809 9527 6.084326 ACATCTGGCGACTTAAAACAAATT 57.916 33.333 0.00 0.00 0.00 1.82
6843 9561 5.365021 AAATAGTCAACTGGCATCTAGCT 57.635 39.130 0.00 0.00 44.79 3.32
6858 9576 5.728471 CATCTAGCTAGTCCCATACATTGG 58.272 45.833 20.10 0.00 46.00 3.16
6879 9597 2.189499 GCATTAGGGCGAGCAAGGG 61.189 63.158 0.00 0.00 0.00 3.95
6901 9619 0.956902 GCCGCCCGGAGTTTCTTTTA 60.957 55.000 11.48 0.00 37.50 1.52
6902 9620 1.084289 CCGCCCGGAGTTTCTTTTAG 58.916 55.000 0.73 0.00 37.50 1.85
6939 9658 7.527568 ACATTTCATTAGAAAACCGGGTTAA 57.472 32.000 13.79 3.96 46.06 2.01
6963 9682 5.796350 AAAAGTTCACACAGTGTCACTAC 57.204 39.130 13.43 0.00 34.79 2.73
6976 9695 5.859114 CAGTGTCACTACAAGAGACATACAC 59.141 44.000 4.85 0.00 45.05 2.90
6981 9701 5.869344 TCACTACAAGAGACATACACAATGC 59.131 40.000 0.00 0.00 39.39 3.56
6982 9702 4.864806 ACTACAAGAGACATACACAATGCG 59.135 41.667 0.00 0.00 39.39 4.73
7052 9772 3.008813 ACTCTGGCAGAATCTTGTGTCAT 59.991 43.478 19.29 0.00 35.44 3.06
7065 9785 0.166814 GTGTCATGCTGAAAGGTCGC 59.833 55.000 0.00 0.00 0.00 5.19
7083 9803 1.097547 GCCCACCATCATCTTCCACG 61.098 60.000 0.00 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.022451 AGACTCTCGTCCGAGCAGAC 61.022 60.000 11.71 10.02 41.16 3.51
59 60 4.925861 GCCATGGCCTCCTCGAGC 62.926 72.222 27.24 0.00 34.56 5.03
103 104 2.190578 CATCCAACCTCCTCCGCC 59.809 66.667 0.00 0.00 0.00 6.13
128 129 3.555527 ATTTAAACTCTAGGGCCGACC 57.444 47.619 0.00 0.00 40.67 4.79
138 139 6.567050 TGCTATCCGACGTTATTTAAACTCT 58.433 36.000 0.00 0.00 0.00 3.24
150 151 2.298158 CTTGCCCTGCTATCCGACGT 62.298 60.000 0.00 0.00 0.00 4.34
151 152 1.592669 CTTGCCCTGCTATCCGACG 60.593 63.158 0.00 0.00 0.00 5.12
153 154 2.505982 GCTTGCCCTGCTATCCGA 59.494 61.111 0.00 0.00 0.00 4.55
154 155 2.969238 CGCTTGCCCTGCTATCCG 60.969 66.667 0.00 0.00 0.00 4.18
155 156 1.889573 GTCGCTTGCCCTGCTATCC 60.890 63.158 0.00 0.00 0.00 2.59
157 158 2.202932 CGTCGCTTGCCCTGCTAT 60.203 61.111 0.00 0.00 0.00 2.97
158 159 3.356639 CTCGTCGCTTGCCCTGCTA 62.357 63.158 0.00 0.00 0.00 3.49
159 160 4.749310 CTCGTCGCTTGCCCTGCT 62.749 66.667 0.00 0.00 0.00 4.24
178 180 0.114168 TTGCTGCCCACCATTAACCT 59.886 50.000 0.00 0.00 0.00 3.50
220 222 1.371558 GGTTGTCGAGGAACCTGCT 59.628 57.895 16.01 0.00 39.94 4.24
324 327 4.626081 GGTGTGCCGGCAGACAGT 62.626 66.667 45.08 0.00 41.31 3.55
353 356 1.278637 CAACCTTTCACGTCGCACC 59.721 57.895 0.00 0.00 0.00 5.01
355 358 1.163420 ATGCAACCTTTCACGTCGCA 61.163 50.000 0.00 0.00 0.00 5.10
357 360 1.201769 CGTATGCAACCTTTCACGTCG 60.202 52.381 0.00 0.00 0.00 5.12
647 1144 1.993948 GTGGGGGAGGGGAGTACAC 60.994 68.421 0.00 0.00 0.00 2.90
904 1406 2.512515 GCGGCAGCAGAGGTTAGG 60.513 66.667 3.18 0.00 44.35 2.69
1444 1949 0.526662 GAGTTCCTGGACACGTCGAT 59.473 55.000 0.00 0.00 0.00 3.59
1809 2314 1.527380 GGGGTTGTTGAGGAACGCA 60.527 57.895 0.00 0.00 37.85 5.24
2088 2596 2.007608 TCATCATCGTCGTCGTCTTCT 58.992 47.619 1.33 0.00 38.33 2.85
2388 2932 1.345741 CTGAACTCCTTGCACCTCTCA 59.654 52.381 0.00 0.00 0.00 3.27
2556 3100 3.793797 AAAGAAAAAGTTGACCGGTGG 57.206 42.857 14.63 0.00 0.00 4.61
2579 3123 1.002142 CGAGTTGACCGGCGTGATATA 60.002 52.381 6.01 0.00 0.00 0.86
2581 3125 1.138036 CGAGTTGACCGGCGTGATA 59.862 57.895 6.01 0.00 0.00 2.15
2587 3131 1.080025 AGTAAGCGAGTTGACCGGC 60.080 57.895 0.00 0.00 0.00 6.13
2658 3207 9.557061 TTAAGATGAGTTACTATTCTAGCGAGA 57.443 33.333 0.00 0.00 0.00 4.04
2675 3225 9.862371 AACTAACACACACTCTATTAAGATGAG 57.138 33.333 0.00 0.00 0.00 2.90
2769 3321 9.907229 AAAGGTCTTATATTTTTACAGAGGGAG 57.093 33.333 0.00 0.00 0.00 4.30
2808 3364 7.230027 TGCCATATGTCATCATTGGTTGTATA 58.770 34.615 1.24 0.00 36.06 1.47
2828 3384 5.021458 ACTCTTCCATGAAATTCTTGCCAT 58.979 37.500 0.00 0.00 0.00 4.40
2843 3399 4.724399 TGGCAAAAGTTATGACTCTTCCA 58.276 39.130 0.00 0.00 34.21 3.53
2895 3674 6.592607 GTGTGTCACGGATTAAAATAAGGAGA 59.407 38.462 0.00 0.00 0.00 3.71
2912 3691 5.851177 CGAACTTTATTTGATGGTGTGTCAC 59.149 40.000 0.00 0.00 0.00 3.67
2922 3701 4.868734 GGGAGACGTCGAACTTTATTTGAT 59.131 41.667 10.46 0.00 0.00 2.57
2923 3702 4.240096 GGGAGACGTCGAACTTTATTTGA 58.760 43.478 10.46 0.00 0.00 2.69
2924 3703 3.991773 TGGGAGACGTCGAACTTTATTTG 59.008 43.478 10.46 0.00 0.00 2.32
2925 3704 3.992427 GTGGGAGACGTCGAACTTTATTT 59.008 43.478 10.46 0.00 0.00 1.40
2926 3705 3.582780 GTGGGAGACGTCGAACTTTATT 58.417 45.455 10.46 0.00 0.00 1.40
2932 3711 2.260743 GGGTGGGAGACGTCGAAC 59.739 66.667 10.46 7.12 0.00 3.95
2961 3746 1.757699 CGAAAGAGGAGGGTAAGGAGG 59.242 57.143 0.00 0.00 0.00 4.30
2979 3764 2.124403 GACGAGTAGGGAGGGCGA 60.124 66.667 0.00 0.00 0.00 5.54
3025 3810 1.538687 GGAAAATGCCCTGCTGCAGT 61.539 55.000 26.41 7.62 45.93 4.40
3030 3815 0.615827 GGGAAGGAAAATGCCCTGCT 60.616 55.000 0.00 0.00 37.59 4.24
3048 3833 3.001634 CGTAGACATTGTTAGCTGCATGG 59.998 47.826 1.02 0.00 0.00 3.66
3061 3846 2.730090 CGACCTTACACGCGTAGACATT 60.730 50.000 13.44 0.00 0.00 2.71
3075 3860 0.320073 CAAACACCGGCTCGACCTTA 60.320 55.000 0.00 0.00 35.61 2.69
3139 3924 0.530744 TTACGCTTGATCCACGCTCT 59.469 50.000 0.00 0.00 0.00 4.09
3144 3929 2.268298 ACACGATTACGCTTGATCCAC 58.732 47.619 0.00 0.00 43.96 4.02
3198 3983 1.688311 CCGATGTCAGAGTCCCCCTAA 60.688 57.143 0.00 0.00 0.00 2.69
3205 3990 0.596083 CCATCGCCGATGTCAGAGTC 60.596 60.000 24.09 0.00 38.28 3.36
3220 4005 3.945434 CACCATGCGAGCGCCATC 61.945 66.667 12.70 0.00 41.09 3.51
3221 4006 4.783621 ACACCATGCGAGCGCCAT 62.784 61.111 12.70 0.00 41.09 4.40
3236 4021 2.435663 CATGTCCCAGCCACCACA 59.564 61.111 0.00 0.00 0.00 4.17
3302 4087 4.664677 GTCGTGAGCCGCACCAGT 62.665 66.667 0.00 0.00 44.85 4.00
3322 4110 1.954528 CATGATTCGGCATGCCTCC 59.045 57.895 33.07 18.93 39.19 4.30
3382 4170 1.498176 GCACCTTACCCCAACCTCCT 61.498 60.000 0.00 0.00 0.00 3.69
3391 4179 1.453928 GGAGCATGGCACCTTACCC 60.454 63.158 0.00 0.00 36.40 3.69
3399 4187 0.911045 TGAGGAAGAGGAGCATGGCA 60.911 55.000 0.00 0.00 0.00 4.92
3401 4189 0.179936 GGTGAGGAAGAGGAGCATGG 59.820 60.000 0.00 0.00 0.00 3.66
3471 4259 1.097547 ACCTACATGCCAATGCTCGC 61.098 55.000 0.00 0.00 37.29 5.03
3481 4269 1.303309 GAGATGCACCACCTACATGC 58.697 55.000 0.00 0.00 39.88 4.06
3500 4291 0.674895 GCCTAACAGTCACTGCCCTG 60.675 60.000 4.13 0.00 34.37 4.45
3501 4292 0.838122 AGCCTAACAGTCACTGCCCT 60.838 55.000 4.13 0.00 34.37 5.19
3503 4294 0.321671 TGAGCCTAACAGTCACTGCC 59.678 55.000 4.13 0.00 34.37 4.85
3506 4297 2.548067 CCGTTTGAGCCTAACAGTCACT 60.548 50.000 0.00 0.00 0.00 3.41
3508 4299 1.876416 GCCGTTTGAGCCTAACAGTCA 60.876 52.381 0.00 0.00 0.00 3.41
3520 4311 1.800032 GCCGATGATTGCCGTTTGA 59.200 52.632 0.00 0.00 0.00 2.69
3552 4343 0.999406 CGTCGCTTCCGATCATTGTT 59.001 50.000 0.00 0.00 46.38 2.83
3553 4344 1.421410 GCGTCGCTTCCGATCATTGT 61.421 55.000 10.68 0.00 46.38 2.71
3594 4385 1.269958 GGCAGGGCAAAGGAGAAATT 58.730 50.000 0.00 0.00 0.00 1.82
3607 4398 2.360165 GCTCACATAGAATTTGGCAGGG 59.640 50.000 0.00 0.00 0.00 4.45
3614 4405 4.517285 ACCGTCATGCTCACATAGAATTT 58.483 39.130 0.00 0.00 33.67 1.82
3635 4426 5.760253 CCATAGTCATTGTCCACCATTCTAC 59.240 44.000 0.00 0.00 0.00 2.59
3671 4462 3.724478 TCATGGGTTGTCATCTAGGAGT 58.276 45.455 0.00 0.00 0.00 3.85
3676 4467 6.239036 CGAGTTAGATCATGGGTTGTCATCTA 60.239 42.308 0.00 0.00 0.00 1.98
3679 4470 4.697514 CGAGTTAGATCATGGGTTGTCAT 58.302 43.478 0.00 0.00 0.00 3.06
3687 4478 5.579904 CCTTATCATGCGAGTTAGATCATGG 59.420 44.000 0.00 0.00 37.49 3.66
3689 4480 5.046735 AGCCTTATCATGCGAGTTAGATCAT 60.047 40.000 0.00 0.00 0.00 2.45
3690 4481 4.281941 AGCCTTATCATGCGAGTTAGATCA 59.718 41.667 0.00 0.00 0.00 2.92
3691 4482 4.624882 CAGCCTTATCATGCGAGTTAGATC 59.375 45.833 0.00 0.00 0.00 2.75
3693 4484 3.800261 GCAGCCTTATCATGCGAGTTAGA 60.800 47.826 0.00 0.00 0.00 2.10
3694 4485 2.478134 GCAGCCTTATCATGCGAGTTAG 59.522 50.000 0.00 0.00 0.00 2.34
3695 4486 2.103094 AGCAGCCTTATCATGCGAGTTA 59.897 45.455 0.00 0.00 44.64 2.24
3696 4487 1.134280 AGCAGCCTTATCATGCGAGTT 60.134 47.619 0.00 0.00 44.64 3.01
3697 4488 0.467384 AGCAGCCTTATCATGCGAGT 59.533 50.000 0.00 0.00 44.64 4.18
3698 4489 1.530293 GAAGCAGCCTTATCATGCGAG 59.470 52.381 0.00 0.00 44.64 5.03
3699 4490 1.586422 GAAGCAGCCTTATCATGCGA 58.414 50.000 0.00 0.00 44.64 5.10
3700 4491 0.234106 CGAAGCAGCCTTATCATGCG 59.766 55.000 0.00 0.00 44.64 4.73
3701 4492 1.586422 TCGAAGCAGCCTTATCATGC 58.414 50.000 0.00 0.00 40.29 4.06
3702 4493 3.201290 ACTTCGAAGCAGCCTTATCATG 58.799 45.455 24.86 0.00 0.00 3.07
3703 4494 3.462021 GACTTCGAAGCAGCCTTATCAT 58.538 45.455 24.86 0.34 0.00 2.45
3704 4495 2.418746 GGACTTCGAAGCAGCCTTATCA 60.419 50.000 24.86 0.00 0.00 2.15
3705 4496 2.205911 GGACTTCGAAGCAGCCTTATC 58.794 52.381 24.86 11.78 0.00 1.75
3706 4497 1.134371 GGGACTTCGAAGCAGCCTTAT 60.134 52.381 24.86 2.49 0.00 1.73
3707 4498 0.249398 GGGACTTCGAAGCAGCCTTA 59.751 55.000 24.86 0.00 0.00 2.69
3708 4499 1.003233 GGGACTTCGAAGCAGCCTT 60.003 57.895 24.86 4.09 0.00 4.35
3709 4500 2.665603 GGGACTTCGAAGCAGCCT 59.334 61.111 24.86 4.90 0.00 4.58
3710 4501 2.436824 GGGGACTTCGAAGCAGCC 60.437 66.667 24.86 21.33 0.00 4.85
3711 4502 0.178068 TATGGGGACTTCGAAGCAGC 59.822 55.000 24.86 14.00 0.00 5.25
3712 4503 2.158900 ACATATGGGGACTTCGAAGCAG 60.159 50.000 24.86 2.68 0.00 4.24
3713 4504 1.837439 ACATATGGGGACTTCGAAGCA 59.163 47.619 24.86 14.66 0.00 3.91
3714 4505 2.622064 ACATATGGGGACTTCGAAGC 57.378 50.000 24.86 16.60 0.00 3.86
3715 4506 4.814771 GGTAAACATATGGGGACTTCGAAG 59.185 45.833 23.43 23.43 0.00 3.79
3716 4507 4.472108 AGGTAAACATATGGGGACTTCGAA 59.528 41.667 7.80 0.00 0.00 3.71
3717 4508 4.035112 AGGTAAACATATGGGGACTTCGA 58.965 43.478 7.80 0.00 0.00 3.71
3718 4509 4.417426 AGGTAAACATATGGGGACTTCG 57.583 45.455 7.80 0.00 0.00 3.79
3719 4510 6.002653 AGAAGGTAAACATATGGGGACTTC 57.997 41.667 7.80 12.84 33.81 3.01
3722 4513 5.751586 TCAAGAAGGTAAACATATGGGGAC 58.248 41.667 7.80 1.35 0.00 4.46
3730 4521 6.379988 ACCAACAACTTCAAGAAGGTAAACAT 59.620 34.615 13.83 0.00 42.53 2.71
3732 4523 6.203808 ACCAACAACTTCAAGAAGGTAAAC 57.796 37.500 13.83 0.00 42.53 2.01
3733 4524 6.844097 AACCAACAACTTCAAGAAGGTAAA 57.156 33.333 13.83 0.00 42.53 2.01
3735 4526 5.946972 TCAAACCAACAACTTCAAGAAGGTA 59.053 36.000 13.83 0.00 42.53 3.08
3748 4539 9.311916 CTTCAAAACATATCTTCAAACCAACAA 57.688 29.630 0.00 0.00 0.00 2.83
3758 4549 8.568794 GGCCTATAACCTTCAAAACATATCTTC 58.431 37.037 0.00 0.00 0.00 2.87
3760 4551 7.582719 TGGCCTATAACCTTCAAAACATATCT 58.417 34.615 3.32 0.00 0.00 1.98
3761 4552 7.040409 CCTGGCCTATAACCTTCAAAACATATC 60.040 40.741 3.32 0.00 0.00 1.63
3762 4553 6.777580 CCTGGCCTATAACCTTCAAAACATAT 59.222 38.462 3.32 0.00 0.00 1.78
3763 4554 6.069323 TCCTGGCCTATAACCTTCAAAACATA 60.069 38.462 3.32 0.00 0.00 2.29
3764 4555 4.956075 CCTGGCCTATAACCTTCAAAACAT 59.044 41.667 3.32 0.00 0.00 2.71
3767 4558 4.938575 TCCTGGCCTATAACCTTCAAAA 57.061 40.909 3.32 0.00 0.00 2.44
3773 4564 3.833070 CGTTAGATCCTGGCCTATAACCT 59.167 47.826 3.32 0.00 0.00 3.50
3788 4579 0.325296 TGGCTCCCCAGACGTTAGAT 60.325 55.000 0.00 0.00 35.79 1.98
3801 4595 0.534203 TGTCAAAGTCGGTTGGCTCC 60.534 55.000 1.75 0.00 34.13 4.70
3804 4601 0.387239 GCATGTCAAAGTCGGTTGGC 60.387 55.000 0.00 0.00 33.59 4.52
3810 4607 1.664016 GCCACTTGCATGTCAAAGTCG 60.664 52.381 1.56 3.89 40.77 4.18
3824 4621 5.305386 AGCCTTCAAAAAGAAATAGCCACTT 59.695 36.000 0.00 0.00 35.40 3.16
3827 4624 5.806654 AAGCCTTCAAAAAGAAATAGCCA 57.193 34.783 0.00 0.00 35.40 4.75
3835 4632 6.238759 GCTCTAAGACAAAGCCTTCAAAAAGA 60.239 38.462 0.00 0.00 34.14 2.52
3836 4633 5.917447 GCTCTAAGACAAAGCCTTCAAAAAG 59.083 40.000 0.00 0.00 0.00 2.27
3848 4645 2.806244 GGACGCAAAGCTCTAAGACAAA 59.194 45.455 0.00 0.00 0.00 2.83
3856 4653 1.202698 AGACAAAGGACGCAAAGCTCT 60.203 47.619 0.00 0.00 0.00 4.09
3860 4657 3.560068 ACTAACAGACAAAGGACGCAAAG 59.440 43.478 0.00 0.00 0.00 2.77
3861 4658 3.537580 ACTAACAGACAAAGGACGCAAA 58.462 40.909 0.00 0.00 0.00 3.68
3864 4661 4.053295 TGTTACTAACAGACAAAGGACGC 58.947 43.478 0.00 0.00 36.25 5.19
3865 4662 7.758076 TGATATGTTACTAACAGACAAAGGACG 59.242 37.037 7.67 0.00 45.95 4.79
3866 4663 8.870879 GTGATATGTTACTAACAGACAAAGGAC 58.129 37.037 7.67 0.00 45.95 3.85
3867 4664 8.038944 GGTGATATGTTACTAACAGACAAAGGA 58.961 37.037 7.67 0.00 45.95 3.36
3870 4667 9.214957 CAAGGTGATATGTTACTAACAGACAAA 57.785 33.333 7.67 0.00 45.95 2.83
3873 4670 7.707035 CCTCAAGGTGATATGTTACTAACAGAC 59.293 40.741 7.67 2.89 45.95 3.51
3896 4693 6.708285 TCTTCAAATCCTACCACTAAACCTC 58.292 40.000 0.00 0.00 0.00 3.85
3905 4702 2.238646 ACGGCATCTTCAAATCCTACCA 59.761 45.455 0.00 0.00 0.00 3.25
3925 4722 3.444703 AGATAGAACATGCCTCGTGAC 57.555 47.619 0.00 0.00 0.00 3.67
3926 4723 5.416013 CCTATAGATAGAACATGCCTCGTGA 59.584 44.000 0.00 0.00 32.05 4.35
3954 4751 4.043184 AGTTTAAGTGGGATTTTACGGGGA 59.957 41.667 0.00 0.00 0.00 4.81
3955 4752 4.338012 AGTTTAAGTGGGATTTTACGGGG 58.662 43.478 0.00 0.00 0.00 5.73
3956 4753 8.735692 TTATAGTTTAAGTGGGATTTTACGGG 57.264 34.615 0.00 0.00 0.00 5.28
3957 4754 9.387257 ACTTATAGTTTAAGTGGGATTTTACGG 57.613 33.333 5.33 0.00 36.51 4.02
3969 4766 9.449719 CTGAATCCAACCACTTATAGTTTAAGT 57.550 33.333 0.60 0.60 38.20 2.24
3971 4768 8.387813 ACCTGAATCCAACCACTTATAGTTTAA 58.612 33.333 0.00 0.00 0.00 1.52
3972 4769 7.924541 ACCTGAATCCAACCACTTATAGTTTA 58.075 34.615 0.00 0.00 0.00 2.01
3982 4902 3.573967 ACATTTGACCTGAATCCAACCAC 59.426 43.478 0.00 0.00 0.00 4.16
3983 4903 3.826157 GACATTTGACCTGAATCCAACCA 59.174 43.478 0.00 0.00 0.00 3.67
3993 4913 5.853282 GTCGAATTTTGAGACATTTGACCTG 59.147 40.000 0.00 0.00 37.65 4.00
3994 4914 5.765182 AGTCGAATTTTGAGACATTTGACCT 59.235 36.000 8.15 0.00 41.81 3.85
3996 4916 8.018677 TCTAGTCGAATTTTGAGACATTTGAC 57.981 34.615 0.00 4.67 41.43 3.18
4012 4932 3.698289 ACCCTCTGTCAATCTAGTCGAA 58.302 45.455 0.00 0.00 0.00 3.71
4013 4933 3.367646 ACCCTCTGTCAATCTAGTCGA 57.632 47.619 0.00 0.00 0.00 4.20
4014 4934 4.452825 TCTACCCTCTGTCAATCTAGTCG 58.547 47.826 0.00 0.00 0.00 4.18
4015 4935 6.153000 TGTTTCTACCCTCTGTCAATCTAGTC 59.847 42.308 0.00 0.00 0.00 2.59
4016 4936 6.017192 TGTTTCTACCCTCTGTCAATCTAGT 58.983 40.000 0.00 0.00 0.00 2.57
4017 4937 6.531503 TGTTTCTACCCTCTGTCAATCTAG 57.468 41.667 0.00 0.00 0.00 2.43
4018 4938 6.497259 ACTTGTTTCTACCCTCTGTCAATCTA 59.503 38.462 0.00 0.00 0.00 1.98
4019 4939 5.308237 ACTTGTTTCTACCCTCTGTCAATCT 59.692 40.000 0.00 0.00 0.00 2.40
4020 4940 5.409826 CACTTGTTTCTACCCTCTGTCAATC 59.590 44.000 0.00 0.00 0.00 2.67
4021 4941 5.163195 ACACTTGTTTCTACCCTCTGTCAAT 60.163 40.000 0.00 0.00 0.00 2.57
4022 4942 4.163458 ACACTTGTTTCTACCCTCTGTCAA 59.837 41.667 0.00 0.00 0.00 3.18
4023 4943 3.709653 ACACTTGTTTCTACCCTCTGTCA 59.290 43.478 0.00 0.00 0.00 3.58
4024 4944 4.338379 ACACTTGTTTCTACCCTCTGTC 57.662 45.455 0.00 0.00 0.00 3.51
4026 4946 6.289064 ACTTTACACTTGTTTCTACCCTCTG 58.711 40.000 0.00 0.00 0.00 3.35
4027 4947 6.496144 ACTTTACACTTGTTTCTACCCTCT 57.504 37.500 0.00 0.00 0.00 3.69
4028 4948 8.092687 TCATACTTTACACTTGTTTCTACCCTC 58.907 37.037 0.00 0.00 0.00 4.30
4047 4972 6.062095 CGGGGATTTTCTACCAATCATACTT 58.938 40.000 0.00 0.00 32.98 2.24
4048 4973 5.456186 CCGGGGATTTTCTACCAATCATACT 60.456 44.000 0.00 0.00 32.98 2.12
4049 4974 4.760204 CCGGGGATTTTCTACCAATCATAC 59.240 45.833 0.00 0.00 32.98 2.39
4050 4975 4.414182 ACCGGGGATTTTCTACCAATCATA 59.586 41.667 6.32 0.00 32.98 2.15
4054 4979 2.420967 CGACCGGGGATTTTCTACCAAT 60.421 50.000 6.32 0.00 0.00 3.16
4061 4986 2.827190 GGCCGACCGGGGATTTTC 60.827 66.667 6.32 0.00 35.78 2.29
4237 5174 4.222847 GTCCATCTCCGTCCGGGC 62.223 72.222 0.00 0.00 34.94 6.13
4331 5275 3.860378 GCCAAAACATGAGGCGAAAATGA 60.860 43.478 0.00 0.00 38.86 2.57
4351 5295 1.605058 TTGGAGAGCACCTACGAGCC 61.605 60.000 0.00 0.00 0.00 4.70
4458 5576 3.267900 GCTTATGGCGCGACTCTTA 57.732 52.632 15.80 0.00 0.00 2.10
4489 5607 8.512138 AGTTTTTGGTGCAGTATATTCAGTTAC 58.488 33.333 0.00 0.00 0.00 2.50
4520 5638 3.815962 TGTGCGTGTACACCATAAACAAT 59.184 39.130 20.11 0.00 39.93 2.71
4551 5669 3.209410 CTTGATCCTGTGAGGTATTGGC 58.791 50.000 0.00 0.00 36.53 4.52
4617 5744 3.222603 TGCTCTTTCCCTCTTTGGTTTC 58.777 45.455 0.00 0.00 0.00 2.78
4655 5782 1.442526 GCACGCAGGAATCAGGATGG 61.443 60.000 0.00 0.00 36.16 3.51
4695 5830 4.399219 GTTCCAGGCCTAAAAAGTTCTCT 58.601 43.478 3.98 0.00 0.00 3.10
4700 5835 3.612795 AAGGTTCCAGGCCTAAAAAGT 57.387 42.857 3.98 0.00 34.81 2.66
4754 5889 2.915869 TCCGGGATCATATTTAGCCCT 58.084 47.619 0.00 0.00 36.62 5.19
4771 5906 2.412325 CGTGGAAATCTTTTCCGTTCCG 60.412 50.000 12.92 9.13 42.10 4.30
4773 5908 2.581637 GCGTGGAAATCTTTTCCGTTC 58.418 47.619 12.92 6.58 41.43 3.95
4776 5911 0.793861 TCGCGTGGAAATCTTTTCCG 59.206 50.000 5.77 4.89 41.43 4.30
4778 5913 2.223377 AGTGTCGCGTGGAAATCTTTTC 59.777 45.455 5.77 0.00 0.00 2.29
4779 5914 2.218603 AGTGTCGCGTGGAAATCTTTT 58.781 42.857 5.77 0.00 0.00 2.27
4784 5919 0.732880 CTCGAGTGTCGCGTGGAAAT 60.733 55.000 5.77 0.00 40.21 2.17
4817 5952 1.409412 CTCCGCGGTCTCAATTATCG 58.591 55.000 27.15 0.00 0.00 2.92
4913 6060 1.808799 CAGCAGCCTCAGCACTACG 60.809 63.158 0.00 0.00 43.56 3.51
5003 6158 2.032030 GCACACACACACACCAGTTATC 60.032 50.000 0.00 0.00 0.00 1.75
5008 6163 1.717791 CCTGCACACACACACACCAG 61.718 60.000 0.00 0.00 0.00 4.00
5014 6169 3.211245 GCTGCCTGCACACACACA 61.211 61.111 0.00 0.00 42.31 3.72
5040 6195 3.733024 TCTCACAACACACAAACGAAC 57.267 42.857 0.00 0.00 0.00 3.95
5041 6196 3.425625 GCTTCTCACAACACACAAACGAA 60.426 43.478 0.00 0.00 0.00 3.85
5042 6197 2.095213 GCTTCTCACAACACACAAACGA 59.905 45.455 0.00 0.00 0.00 3.85
5043 6198 2.440501 GCTTCTCACAACACACAAACG 58.559 47.619 0.00 0.00 0.00 3.60
5102 6264 2.030893 ACGTTGTGCCTGATTTGTCATG 60.031 45.455 0.00 0.00 0.00 3.07
5225 6393 7.382218 GTGTCCACATCACCAGAAATTAAAAAG 59.618 37.037 0.00 0.00 0.00 2.27
5226 6394 7.206687 GTGTCCACATCACCAGAAATTAAAAA 58.793 34.615 0.00 0.00 0.00 1.94
5231 6399 2.813754 CGTGTCCACATCACCAGAAATT 59.186 45.455 0.00 0.00 32.86 1.82
5337 7097 6.005583 AGTTAGCATGCATGTGTATATTGC 57.994 37.500 26.79 11.63 36.91 3.56
5365 7125 2.848310 CAACGTGGACGCGGTAAC 59.152 61.111 12.47 3.95 44.43 2.50
5391 7151 3.357079 CAGCACAGGTTCACCGGC 61.357 66.667 0.00 0.00 42.08 6.13
5392 7152 1.961277 GACAGCACAGGTTCACCGG 60.961 63.158 0.00 0.00 42.08 5.28
6113 7876 2.744318 CCAATGGCCGTACGTGCA 60.744 61.111 23.71 13.81 0.00 4.57
6170 7936 4.137543 GCTCAAGAAAAGAAGACTTCCCA 58.862 43.478 11.67 0.00 35.05 4.37
6172 7938 6.384258 AAAGCTCAAGAAAAGAAGACTTCC 57.616 37.500 11.67 0.00 35.05 3.46
6195 7961 0.707024 TGAGAGCCAGAGAGGAAGGA 59.293 55.000 0.00 0.00 41.22 3.36
6197 7963 1.134729 GCTTGAGAGCCAGAGAGGAAG 60.135 57.143 0.00 0.00 43.29 3.46
6198 7964 0.901124 GCTTGAGAGCCAGAGAGGAA 59.099 55.000 0.00 0.00 43.29 3.36
6380 9098 3.371898 TGACATTCAGCTAAACTGCGATG 59.628 43.478 0.00 0.00 46.76 3.84
6406 9124 7.112452 ACTAACCCAAATATCATTTTCAGGC 57.888 36.000 0.00 0.00 0.00 4.85
6412 9130 9.801873 CAAAATCGACTAACCCAAATATCATTT 57.198 29.630 0.00 0.00 0.00 2.32
6413 9131 7.920682 GCAAAATCGACTAACCCAAATATCATT 59.079 33.333 0.00 0.00 0.00 2.57
6414 9132 7.068103 TGCAAAATCGACTAACCCAAATATCAT 59.932 33.333 0.00 0.00 0.00 2.45
6415 9133 6.375736 TGCAAAATCGACTAACCCAAATATCA 59.624 34.615 0.00 0.00 0.00 2.15
6416 9134 6.791303 TGCAAAATCGACTAACCCAAATATC 58.209 36.000 0.00 0.00 0.00 1.63
6417 9135 6.767524 TGCAAAATCGACTAACCCAAATAT 57.232 33.333 0.00 0.00 0.00 1.28
6418 9136 6.375736 TCATGCAAAATCGACTAACCCAAATA 59.624 34.615 0.00 0.00 0.00 1.40
6419 9137 5.184864 TCATGCAAAATCGACTAACCCAAAT 59.815 36.000 0.00 0.00 0.00 2.32
6420 9138 4.520874 TCATGCAAAATCGACTAACCCAAA 59.479 37.500 0.00 0.00 0.00 3.28
6421 9139 4.075682 TCATGCAAAATCGACTAACCCAA 58.924 39.130 0.00 0.00 0.00 4.12
6422 9140 3.680490 TCATGCAAAATCGACTAACCCA 58.320 40.909 0.00 0.00 0.00 4.51
6423 9141 4.335315 TCATCATGCAAAATCGACTAACCC 59.665 41.667 0.00 0.00 0.00 4.11
6424 9142 5.484173 TCATCATGCAAAATCGACTAACC 57.516 39.130 0.00 0.00 0.00 2.85
6425 9143 6.021153 GCTTTCATCATGCAAAATCGACTAAC 60.021 38.462 0.00 0.00 0.00 2.34
6426 9144 6.029607 GCTTTCATCATGCAAAATCGACTAA 58.970 36.000 0.00 0.00 0.00 2.24
6427 9145 5.123661 TGCTTTCATCATGCAAAATCGACTA 59.876 36.000 0.00 0.00 32.71 2.59
6434 9152 3.322369 CTGCTGCTTTCATCATGCAAAA 58.678 40.909 0.00 0.00 35.23 2.44
6446 9164 2.280797 TTCGACCGCTGCTGCTTT 60.281 55.556 14.03 0.00 36.97 3.51
6469 9187 2.432628 CGCGAGCCGACTCCTTTT 60.433 61.111 0.00 0.00 40.03 2.27
6470 9188 4.436998 CCGCGAGCCGACTCCTTT 62.437 66.667 8.23 0.00 40.03 3.11
6477 9195 4.796231 GCTTCTTCCGCGAGCCGA 62.796 66.667 8.23 0.00 40.02 5.54
6479 9197 3.191539 CTGCTTCTTCCGCGAGCC 61.192 66.667 8.23 0.00 35.59 4.70
6480 9198 3.858989 GCTGCTTCTTCCGCGAGC 61.859 66.667 8.23 9.07 36.95 5.03
6482 9200 2.738521 GTGCTGCTTCTTCCGCGA 60.739 61.111 8.23 0.00 0.00 5.87
6483 9201 3.793144 GGTGCTGCTTCTTCCGCG 61.793 66.667 0.00 0.00 0.00 6.46
6484 9202 1.986575 GATGGTGCTGCTTCTTCCGC 61.987 60.000 0.00 0.00 0.00 5.54
6485 9203 0.392193 AGATGGTGCTGCTTCTTCCG 60.392 55.000 0.00 0.00 0.00 4.30
6486 9204 2.559440 CTAGATGGTGCTGCTTCTTCC 58.441 52.381 0.00 0.00 0.00 3.46
6487 9205 2.559440 CCTAGATGGTGCTGCTTCTTC 58.441 52.381 0.00 1.38 0.00 2.87
6488 9206 2.706339 CCTAGATGGTGCTGCTTCTT 57.294 50.000 0.00 0.00 0.00 2.52
6499 9217 5.512232 GCCTTCCAAAGATAGACCTAGATGG 60.512 48.000 0.00 0.00 42.93 3.51
6500 9218 5.070981 TGCCTTCCAAAGATAGACCTAGATG 59.929 44.000 0.00 0.00 0.00 2.90
6501 9219 5.219739 TGCCTTCCAAAGATAGACCTAGAT 58.780 41.667 0.00 0.00 0.00 1.98
6502 9220 4.620723 TGCCTTCCAAAGATAGACCTAGA 58.379 43.478 0.00 0.00 0.00 2.43
6503 9221 4.202305 CCTGCCTTCCAAAGATAGACCTAG 60.202 50.000 0.00 0.00 0.00 3.02
6504 9222 3.711704 CCTGCCTTCCAAAGATAGACCTA 59.288 47.826 0.00 0.00 0.00 3.08
6505 9223 2.507471 CCTGCCTTCCAAAGATAGACCT 59.493 50.000 0.00 0.00 0.00 3.85
6506 9224 2.924421 CCTGCCTTCCAAAGATAGACC 58.076 52.381 0.00 0.00 0.00 3.85
6507 9225 2.092699 AGCCTGCCTTCCAAAGATAGAC 60.093 50.000 0.00 0.00 0.00 2.59
6508 9226 2.171448 GAGCCTGCCTTCCAAAGATAGA 59.829 50.000 0.00 0.00 0.00 1.98
6509 9227 2.570135 GAGCCTGCCTTCCAAAGATAG 58.430 52.381 0.00 0.00 0.00 2.08
6510 9228 1.134401 CGAGCCTGCCTTCCAAAGATA 60.134 52.381 0.00 0.00 0.00 1.98
6511 9229 0.393537 CGAGCCTGCCTTCCAAAGAT 60.394 55.000 0.00 0.00 0.00 2.40
6512 9230 1.003355 CGAGCCTGCCTTCCAAAGA 60.003 57.895 0.00 0.00 0.00 2.52
6513 9231 2.694760 GCGAGCCTGCCTTCCAAAG 61.695 63.158 0.00 0.00 0.00 2.77
6514 9232 2.672996 GCGAGCCTGCCTTCCAAA 60.673 61.111 0.00 0.00 0.00 3.28
6515 9233 3.640407 AGCGAGCCTGCCTTCCAA 61.640 61.111 0.00 0.00 34.65 3.53
6516 9234 4.399395 CAGCGAGCCTGCCTTCCA 62.399 66.667 0.00 0.00 34.21 3.53
6523 9241 1.680522 ATAGACACCCAGCGAGCCTG 61.681 60.000 0.00 0.00 41.41 4.85
6524 9242 1.381872 ATAGACACCCAGCGAGCCT 60.382 57.895 0.00 0.00 0.00 4.58
6525 9243 1.068250 GATAGACACCCAGCGAGCC 59.932 63.158 0.00 0.00 0.00 4.70
6526 9244 0.461961 AAGATAGACACCCAGCGAGC 59.538 55.000 0.00 0.00 0.00 5.03
6527 9245 2.294791 CCTAAGATAGACACCCAGCGAG 59.705 54.545 0.00 0.00 0.00 5.03
6528 9246 2.307768 CCTAAGATAGACACCCAGCGA 58.692 52.381 0.00 0.00 0.00 4.93
6529 9247 1.341531 CCCTAAGATAGACACCCAGCG 59.658 57.143 0.00 0.00 0.00 5.18
6530 9248 2.103263 CACCCTAAGATAGACACCCAGC 59.897 54.545 0.00 0.00 0.00 4.85
6531 9249 2.700897 CCACCCTAAGATAGACACCCAG 59.299 54.545 0.00 0.00 0.00 4.45
6532 9250 2.759355 CCACCCTAAGATAGACACCCA 58.241 52.381 0.00 0.00 0.00 4.51
6533 9251 1.416772 GCCACCCTAAGATAGACACCC 59.583 57.143 0.00 0.00 0.00 4.61
6534 9252 2.116238 TGCCACCCTAAGATAGACACC 58.884 52.381 0.00 0.00 0.00 4.16
6535 9253 3.798202 CTTGCCACCCTAAGATAGACAC 58.202 50.000 0.00 0.00 0.00 3.67
6536 9254 2.170607 GCTTGCCACCCTAAGATAGACA 59.829 50.000 0.00 0.00 0.00 3.41
6537 9255 2.436173 AGCTTGCCACCCTAAGATAGAC 59.564 50.000 0.00 0.00 0.00 2.59
6538 9256 2.764269 AGCTTGCCACCCTAAGATAGA 58.236 47.619 0.00 0.00 0.00 1.98
6539 9257 3.209410 CAAGCTTGCCACCCTAAGATAG 58.791 50.000 14.65 0.00 0.00 2.08
6540 9258 3.281727 CAAGCTTGCCACCCTAAGATA 57.718 47.619 14.65 0.00 0.00 1.98
6541 9259 2.134789 CAAGCTTGCCACCCTAAGAT 57.865 50.000 14.65 0.00 0.00 2.40
6542 9260 3.650647 CAAGCTTGCCACCCTAAGA 57.349 52.632 14.65 0.00 0.00 2.10
6553 9271 5.841957 AAAATAGATACCCAGCAAGCTTG 57.158 39.130 22.44 22.44 0.00 4.01
6554 9272 6.064717 CCTAAAATAGATACCCAGCAAGCTT 58.935 40.000 0.00 0.00 0.00 3.74
6555 9273 5.456763 CCCTAAAATAGATACCCAGCAAGCT 60.457 44.000 0.00 0.00 0.00 3.74
6556 9274 4.762251 CCCTAAAATAGATACCCAGCAAGC 59.238 45.833 0.00 0.00 0.00 4.01
6557 9275 4.762251 GCCCTAAAATAGATACCCAGCAAG 59.238 45.833 0.00 0.00 0.00 4.01
6558 9276 4.415512 AGCCCTAAAATAGATACCCAGCAA 59.584 41.667 0.00 0.00 0.00 3.91
6559 9277 3.980698 AGCCCTAAAATAGATACCCAGCA 59.019 43.478 0.00 0.00 0.00 4.41
6560 9278 4.202472 ACAGCCCTAAAATAGATACCCAGC 60.202 45.833 0.00 0.00 0.00 4.85
6561 9279 5.308825 CACAGCCCTAAAATAGATACCCAG 58.691 45.833 0.00 0.00 0.00 4.45
6562 9280 4.104102 CCACAGCCCTAAAATAGATACCCA 59.896 45.833 0.00 0.00 0.00 4.51
6573 9291 1.228737 GCAACCCCACAGCCCTAAA 60.229 57.895 0.00 0.00 0.00 1.85
6574 9292 2.424842 CTGCAACCCCACAGCCCTAA 62.425 60.000 0.00 0.00 0.00 2.69
6580 9298 1.270550 GTCAAATCTGCAACCCCACAG 59.729 52.381 0.00 0.00 35.15 3.66
6581 9299 1.327303 GTCAAATCTGCAACCCCACA 58.673 50.000 0.00 0.00 0.00 4.17
6583 9301 0.893270 CCGTCAAATCTGCAACCCCA 60.893 55.000 0.00 0.00 0.00 4.96
6588 9306 6.071672 TCCATATTTTTCCGTCAAATCTGCAA 60.072 34.615 0.00 0.00 0.00 4.08
6590 9308 5.890334 TCCATATTTTTCCGTCAAATCTGC 58.110 37.500 0.00 0.00 0.00 4.26
6591 9309 6.095440 ACCTCCATATTTTTCCGTCAAATCTG 59.905 38.462 0.00 0.00 0.00 2.90
6620 9338 1.839894 GCCATCCCTCTAACCCTGG 59.160 63.158 0.00 0.00 0.00 4.45
6622 9340 0.104934 ATCGCCATCCCTCTAACCCT 60.105 55.000 0.00 0.00 0.00 4.34
6685 9403 2.112815 GGTCCAACCGCATGCTACC 61.113 63.158 17.13 9.41 0.00 3.18
6686 9404 3.497879 GGTCCAACCGCATGCTAC 58.502 61.111 17.13 4.10 0.00 3.58
6712 9430 1.457009 TTTTTCCCAAACCGCCCGAG 61.457 55.000 0.00 0.00 0.00 4.63
6714 9432 3.130227 TTTTTCCCAAACCGCCCG 58.870 55.556 0.00 0.00 0.00 6.13
6741 9459 2.306384 AACCTCGTTCCCATCCCCC 61.306 63.158 0.00 0.00 0.00 5.40
6743 9461 0.326927 TTCAACCTCGTTCCCATCCC 59.673 55.000 0.00 0.00 0.00 3.85
6753 9471 3.865745 ACATATCGCTTTCTTCAACCTCG 59.134 43.478 0.00 0.00 0.00 4.63
6771 9489 5.006261 CGCCAGATGTAAAACGAATGACATA 59.994 40.000 0.00 0.00 32.75 2.29
6775 9493 3.369756 GTCGCCAGATGTAAAACGAATGA 59.630 43.478 0.00 0.00 0.00 2.57
6776 9494 3.370978 AGTCGCCAGATGTAAAACGAATG 59.629 43.478 0.00 0.00 0.00 2.67
6777 9495 3.596214 AGTCGCCAGATGTAAAACGAAT 58.404 40.909 0.00 0.00 0.00 3.34
6778 9496 3.034721 AGTCGCCAGATGTAAAACGAA 57.965 42.857 0.00 0.00 0.00 3.85
6780 9498 4.914312 TTAAGTCGCCAGATGTAAAACG 57.086 40.909 0.00 0.00 0.00 3.60
6781 9499 6.432107 TGTTTTAAGTCGCCAGATGTAAAAC 58.568 36.000 15.27 15.27 41.95 2.43
6782 9500 6.621316 TGTTTTAAGTCGCCAGATGTAAAA 57.379 33.333 0.00 0.00 31.18 1.52
6785 9503 6.811253 ATTTGTTTTAAGTCGCCAGATGTA 57.189 33.333 0.00 0.00 0.00 2.29
6790 9508 6.640499 TCAATCAATTTGTTTTAAGTCGCCAG 59.360 34.615 0.00 0.00 36.65 4.85
6793 9511 7.388290 TGTCAATCAATTTGTTTTAAGTCGC 57.612 32.000 0.00 0.00 36.65 5.19
6826 9544 3.491792 GGACTAGCTAGATGCCAGTTGAC 60.492 52.174 27.45 0.00 43.37 3.18
6829 9547 2.043227 GGGACTAGCTAGATGCCAGTT 58.957 52.381 27.45 1.49 43.37 3.16
6834 9552 5.174395 CAATGTATGGGACTAGCTAGATGC 58.826 45.833 27.45 15.45 43.29 3.91
6858 9576 0.099436 CTTGCTCGCCCTAATGCAAC 59.901 55.000 0.00 0.00 39.98 4.17
6888 9606 6.480981 TGTGGTTACTTCTAAAAGAAACTCCG 59.519 38.462 0.00 0.00 33.19 4.63
6916 9635 8.819643 TTTTAACCCGGTTTTCTAATGAAATG 57.180 30.769 8.44 0.00 41.24 2.32
6947 9666 3.951680 TCTCTTGTAGTGACACTGTGTGA 59.048 43.478 19.62 7.17 36.96 3.58
6963 9682 4.397382 CAACGCATTGTGTATGTCTCTTG 58.603 43.478 2.78 0.00 36.57 3.02
6976 9695 6.809297 TTGATGCAATATTACAACGCATTG 57.191 33.333 10.51 0.00 43.06 2.82
6981 9701 6.195244 GCAGTCTTTGATGCAATATTACAACG 59.805 38.462 0.00 0.00 42.11 4.10
6982 9702 7.441878 GCAGTCTTTGATGCAATATTACAAC 57.558 36.000 0.00 0.00 42.11 3.32
7065 9785 0.464373 CCGTGGAAGATGATGGTGGG 60.464 60.000 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.