Multiple sequence alignment - TraesCS2D01G442900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G442900 chr2D 100.000 4311 0 0 1 4311 553389313 553385003 0.000000e+00 7962.0
1 TraesCS2D01G442900 chr2D 95.833 96 4 0 3437 3532 579065412 579065507 5.770000e-34 156.0
2 TraesCS2D01G442900 chr2B 94.739 2718 116 10 740 3437 659086107 659083397 0.000000e+00 4202.0
3 TraesCS2D01G442900 chr2B 97.439 781 16 4 3531 4310 659083386 659082609 0.000000e+00 1328.0
4 TraesCS2D01G442900 chr2B 90.987 233 20 1 50 281 659086721 659086489 3.240000e-81 313.0
5 TraesCS2D01G442900 chr2B 95.876 97 4 0 3436 3532 373185767 373185671 1.600000e-34 158.0
6 TraesCS2D01G442900 chr2B 95.000 100 5 0 3437 3536 496539888 496539789 1.600000e-34 158.0
7 TraesCS2D01G442900 chr2A 93.416 2263 118 13 1082 3320 693445707 693443452 0.000000e+00 3325.0
8 TraesCS2D01G442900 chr2A 86.847 517 48 8 576 1080 693446303 693445795 1.050000e-155 560.0
9 TraesCS2D01G442900 chr3A 85.171 762 99 13 3545 4302 741667411 741668162 0.000000e+00 769.0
10 TraesCS2D01G442900 chr5B 80.725 524 66 14 2519 3018 455883118 455883630 4.070000e-100 375.0
11 TraesCS2D01G442900 chr5B 94.231 104 6 0 3429 3532 248778945 248779048 4.460000e-35 159.0
12 TraesCS2D01G442900 chr6B 96.842 95 3 0 3438 3532 170863779 170863685 4.460000e-35 159.0
13 TraesCS2D01G442900 chr3D 96.842 95 3 0 3438 3532 520444640 520444546 4.460000e-35 159.0
14 TraesCS2D01G442900 chr7B 95.833 96 4 0 3437 3532 367495736 367495831 5.770000e-34 156.0
15 TraesCS2D01G442900 chr7B 90.909 110 8 2 3424 3532 100224594 100224702 3.470000e-31 147.0
16 TraesCS2D01G442900 chr3B 94.000 100 6 0 3432 3531 561696277 561696178 7.470000e-33 152.0
17 TraesCS2D01G442900 chr1B 90.588 85 7 1 198 281 529950495 529950579 1.270000e-20 111.0
18 TraesCS2D01G442900 chr1B 100.000 48 0 0 3 50 657115130 657115177 5.940000e-14 89.8
19 TraesCS2D01G442900 chr1A 88.235 85 9 1 198 281 492628085 492628169 2.740000e-17 100.0
20 TraesCS2D01G442900 chr1A 98.148 54 0 1 3 55 145172264 145172317 4.590000e-15 93.5
21 TraesCS2D01G442900 chr1A 91.803 61 5 0 3 63 328227481 328227421 7.680000e-13 86.1
22 TraesCS2D01G442900 chr5A 98.113 53 1 0 1 53 143954952 143954900 4.590000e-15 93.5
23 TraesCS2D01G442900 chr5A 94.828 58 1 2 3 59 297654071 297654127 5.940000e-14 89.8
24 TraesCS2D01G442900 chr4D 98.113 53 1 0 3 55 127185066 127185014 4.590000e-15 93.5
25 TraesCS2D01G442900 chr6D 94.915 59 0 3 3 60 134595149 134595205 5.940000e-14 89.8
26 TraesCS2D01G442900 chr6D 94.915 59 0 3 3 60 135050358 135050414 5.940000e-14 89.8
27 TraesCS2D01G442900 chr4A 89.706 68 3 4 3 69 711232309 711232245 2.760000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G442900 chr2D 553385003 553389313 4310 True 7962.000000 7962 100.000000 1 4311 1 chr2D.!!$R1 4310
1 TraesCS2D01G442900 chr2B 659082609 659086721 4112 True 1947.666667 4202 94.388333 50 4310 3 chr2B.!!$R3 4260
2 TraesCS2D01G442900 chr2A 693443452 693446303 2851 True 1942.500000 3325 90.131500 576 3320 2 chr2A.!!$R1 2744
3 TraesCS2D01G442900 chr3A 741667411 741668162 751 False 769.000000 769 85.171000 3545 4302 1 chr3A.!!$F1 757
4 TraesCS2D01G442900 chr5B 455883118 455883630 512 False 375.000000 375 80.725000 2519 3018 1 chr5B.!!$F2 499

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 485 0.033504 TGTCGGTGTTGAAGAGGCTC 59.966 55.0 6.34 6.34 0.0 4.70 F
814 832 0.036010 CCTCCAAGACGCACTCCATT 60.036 55.0 0.00 0.00 0.0 3.16 F
1779 1916 0.391263 ACGGTTTTGATCGGCCTCTC 60.391 55.0 0.00 0.00 0.0 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2095 2236 0.247736 AGCTGAAGTAGGACGCCTTG 59.752 55.0 3.71 0.0 34.61 3.61 R
2516 2657 0.251297 TTGTCCAAGCACCTGATGGG 60.251 55.0 0.00 0.0 41.89 4.00 R
3476 3646 0.035056 CCATCAGGTTGGGTCTCACC 60.035 60.0 0.00 0.0 37.60 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.592426 GTAGGCCCAACACGAGTC 57.408 61.111 0.00 0.00 0.00 3.36
18 19 1.972978 GTAGGCCCAACACGAGTCT 59.027 57.895 0.00 0.00 0.00 3.24
19 20 1.180029 GTAGGCCCAACACGAGTCTA 58.820 55.000 0.00 0.00 0.00 2.59
20 21 1.135170 GTAGGCCCAACACGAGTCTAC 60.135 57.143 0.00 0.00 0.00 2.59
21 22 0.830444 AGGCCCAACACGAGTCTACA 60.830 55.000 0.00 0.00 0.00 2.74
22 23 0.034337 GGCCCAACACGAGTCTACAA 59.966 55.000 0.00 0.00 0.00 2.41
23 24 1.429463 GCCCAACACGAGTCTACAAG 58.571 55.000 0.00 0.00 0.00 3.16
24 25 1.000506 GCCCAACACGAGTCTACAAGA 59.999 52.381 0.00 0.00 0.00 3.02
25 26 2.547218 GCCCAACACGAGTCTACAAGAA 60.547 50.000 0.00 0.00 0.00 2.52
26 27 3.318017 CCCAACACGAGTCTACAAGAAG 58.682 50.000 0.00 0.00 0.00 2.85
27 28 3.005472 CCCAACACGAGTCTACAAGAAGA 59.995 47.826 0.00 0.00 0.00 2.87
28 29 4.500887 CCCAACACGAGTCTACAAGAAGAA 60.501 45.833 0.00 0.00 0.00 2.52
29 30 4.681942 CCAACACGAGTCTACAAGAAGAAG 59.318 45.833 0.00 0.00 0.00 2.85
30 31 4.506886 ACACGAGTCTACAAGAAGAAGG 57.493 45.455 0.00 0.00 0.00 3.46
31 32 3.890147 ACACGAGTCTACAAGAAGAAGGT 59.110 43.478 0.00 0.00 0.00 3.50
32 33 4.341520 ACACGAGTCTACAAGAAGAAGGTT 59.658 41.667 0.00 0.00 0.00 3.50
33 34 4.681942 CACGAGTCTACAAGAAGAAGGTTG 59.318 45.833 0.00 0.00 0.00 3.77
34 35 3.675698 CGAGTCTACAAGAAGAAGGTTGC 59.324 47.826 0.00 0.00 0.00 4.17
35 36 3.654414 AGTCTACAAGAAGAAGGTTGCG 58.346 45.455 0.00 0.00 0.00 4.85
36 37 3.069729 AGTCTACAAGAAGAAGGTTGCGT 59.930 43.478 0.00 0.00 0.00 5.24
37 38 4.280174 AGTCTACAAGAAGAAGGTTGCGTA 59.720 41.667 0.00 0.00 0.00 4.42
38 39 4.621886 GTCTACAAGAAGAAGGTTGCGTAG 59.378 45.833 0.00 0.00 0.00 3.51
39 40 3.470645 ACAAGAAGAAGGTTGCGTAGT 57.529 42.857 0.00 0.00 0.00 2.73
40 41 4.595762 ACAAGAAGAAGGTTGCGTAGTA 57.404 40.909 0.00 0.00 0.00 1.82
41 42 4.557205 ACAAGAAGAAGGTTGCGTAGTAG 58.443 43.478 0.00 0.00 0.00 2.57
42 43 4.280174 ACAAGAAGAAGGTTGCGTAGTAGA 59.720 41.667 0.00 0.00 0.00 2.59
43 44 4.437772 AGAAGAAGGTTGCGTAGTAGAC 57.562 45.455 0.00 0.00 0.00 2.59
44 45 3.825014 AGAAGAAGGTTGCGTAGTAGACA 59.175 43.478 0.00 0.00 0.00 3.41
45 46 4.463186 AGAAGAAGGTTGCGTAGTAGACAT 59.537 41.667 0.00 0.00 0.00 3.06
46 47 4.373348 AGAAGGTTGCGTAGTAGACATC 57.627 45.455 0.00 0.00 0.00 3.06
47 48 3.762288 AGAAGGTTGCGTAGTAGACATCA 59.238 43.478 0.00 0.00 0.00 3.07
48 49 3.505464 AGGTTGCGTAGTAGACATCAC 57.495 47.619 0.00 0.00 0.00 3.06
75 76 5.665360 TCATGTCTCCATTCACCTATAACCA 59.335 40.000 0.00 0.00 0.00 3.67
83 84 2.394632 TCACCTATAACCATGCGTCCT 58.605 47.619 0.00 0.00 0.00 3.85
100 101 6.408035 TGCGTCCTATTTACCAATTTGACTA 58.592 36.000 0.00 0.00 0.00 2.59
104 105 7.568861 CGTCCTATTTACCAATTTGACTATCGC 60.569 40.741 0.00 0.00 0.00 4.58
110 111 3.436704 ACCAATTTGACTATCGCACTGTG 59.563 43.478 2.76 2.76 0.00 3.66
132 133 2.254546 TGCTGTACTCCCAAACAGTG 57.745 50.000 4.57 0.00 44.03 3.66
134 135 2.224281 TGCTGTACTCCCAAACAGTGAG 60.224 50.000 0.00 0.00 44.03 3.51
158 159 4.130118 CTGTTCATACTAGATGTTGCCCC 58.870 47.826 0.00 0.00 0.00 5.80
281 283 7.148086 TGGAAACAGGTATTACATCAAAGCATC 60.148 37.037 0.00 0.00 35.01 3.91
282 284 7.067494 GGAAACAGGTATTACATCAAAGCATCT 59.933 37.037 0.00 0.00 0.00 2.90
283 285 7.944729 AACAGGTATTACATCAAAGCATCTT 57.055 32.000 0.00 0.00 0.00 2.40
285 287 7.112122 ACAGGTATTACATCAAAGCATCTTGA 58.888 34.615 0.00 0.00 39.56 3.02
286 288 7.066284 ACAGGTATTACATCAAAGCATCTTGAC 59.934 37.037 0.00 0.00 38.12 3.18
287 289 7.066163 CAGGTATTACATCAAAGCATCTTGACA 59.934 37.037 0.00 0.00 38.12 3.58
290 292 4.761235 ACATCAAAGCATCTTGACACTG 57.239 40.909 0.00 0.00 38.12 3.66
291 293 4.392047 ACATCAAAGCATCTTGACACTGA 58.608 39.130 0.00 0.00 38.12 3.41
292 294 4.823442 ACATCAAAGCATCTTGACACTGAA 59.177 37.500 0.00 0.00 38.12 3.02
293 295 5.048921 ACATCAAAGCATCTTGACACTGAAG 60.049 40.000 0.00 0.00 38.12 3.02
294 296 4.707105 TCAAAGCATCTTGACACTGAAGA 58.293 39.130 0.00 0.00 34.00 2.87
295 297 5.125356 TCAAAGCATCTTGACACTGAAGAA 58.875 37.500 0.00 0.00 33.22 2.52
297 299 6.263842 TCAAAGCATCTTGACACTGAAGAAAT 59.736 34.615 0.00 0.00 33.22 2.17
298 300 5.624344 AGCATCTTGACACTGAAGAAATG 57.376 39.130 0.00 0.00 33.22 2.32
299 301 4.458295 AGCATCTTGACACTGAAGAAATGG 59.542 41.667 0.00 0.00 33.22 3.16
300 302 4.456911 GCATCTTGACACTGAAGAAATGGA 59.543 41.667 0.00 0.00 33.22 3.41
301 303 5.391736 GCATCTTGACACTGAAGAAATGGAG 60.392 44.000 0.00 0.00 33.22 3.86
302 304 5.551305 TCTTGACACTGAAGAAATGGAGA 57.449 39.130 0.00 0.00 0.00 3.71
303 305 6.119240 TCTTGACACTGAAGAAATGGAGAT 57.881 37.500 0.00 0.00 0.00 2.75
304 306 5.936372 TCTTGACACTGAAGAAATGGAGATG 59.064 40.000 0.00 0.00 0.00 2.90
305 307 4.005650 TGACACTGAAGAAATGGAGATGC 58.994 43.478 0.00 0.00 0.00 3.91
306 308 4.005650 GACACTGAAGAAATGGAGATGCA 58.994 43.478 0.00 0.00 0.00 3.96
308 310 4.008330 CACTGAAGAAATGGAGATGCACT 58.992 43.478 0.00 0.00 0.00 4.40
309 311 5.181009 CACTGAAGAAATGGAGATGCACTA 58.819 41.667 0.00 0.00 0.00 2.74
310 312 5.821470 CACTGAAGAAATGGAGATGCACTAT 59.179 40.000 0.00 0.00 0.00 2.12
311 313 6.318144 CACTGAAGAAATGGAGATGCACTATT 59.682 38.462 0.00 0.00 0.00 1.73
312 314 6.318144 ACTGAAGAAATGGAGATGCACTATTG 59.682 38.462 0.00 0.00 0.00 1.90
313 315 6.417258 TGAAGAAATGGAGATGCACTATTGA 58.583 36.000 0.00 0.00 0.00 2.57
314 316 6.541278 TGAAGAAATGGAGATGCACTATTGAG 59.459 38.462 0.00 0.00 0.00 3.02
315 317 5.999044 AGAAATGGAGATGCACTATTGAGT 58.001 37.500 0.00 0.00 35.80 3.41
316 318 6.421485 AGAAATGGAGATGCACTATTGAGTT 58.579 36.000 0.00 0.00 31.73 3.01
318 320 6.446781 AATGGAGATGCACTATTGAGTTTG 57.553 37.500 0.00 0.00 31.73 2.93
320 322 3.691118 GGAGATGCACTATTGAGTTTGCA 59.309 43.478 0.00 0.00 38.54 4.08
321 323 4.337555 GGAGATGCACTATTGAGTTTGCAT 59.662 41.667 7.60 7.60 44.07 3.96
323 325 3.745332 TGCACTATTGAGTTTGCATCG 57.255 42.857 0.00 0.00 31.52 3.84
324 326 2.159531 TGCACTATTGAGTTTGCATCGC 60.160 45.455 0.00 0.00 31.52 4.58
325 327 2.697363 CACTATTGAGTTTGCATCGCG 58.303 47.619 0.00 0.00 31.73 5.87
328 330 2.270297 ATTGAGTTTGCATCGCGGCC 62.270 55.000 6.13 0.00 0.00 6.13
329 331 3.127533 GAGTTTGCATCGCGGCCT 61.128 61.111 6.13 0.00 0.00 5.19
330 332 3.386867 GAGTTTGCATCGCGGCCTG 62.387 63.158 6.13 2.79 0.00 4.85
331 333 3.737172 GTTTGCATCGCGGCCTGT 61.737 61.111 6.13 0.00 0.00 4.00
332 334 3.736100 TTTGCATCGCGGCCTGTG 61.736 61.111 6.13 0.89 0.00 3.66
334 336 3.597675 TTGCATCGCGGCCTGTGTA 62.598 57.895 6.13 0.00 0.00 2.90
335 337 3.564027 GCATCGCGGCCTGTGTAC 61.564 66.667 6.13 0.00 0.00 2.90
336 338 2.125713 CATCGCGGCCTGTGTACA 60.126 61.111 6.13 0.00 0.00 2.90
338 340 1.004320 ATCGCGGCCTGTGTACAAA 60.004 52.632 6.13 0.00 0.00 2.83
339 341 0.604243 ATCGCGGCCTGTGTACAAAA 60.604 50.000 6.13 0.00 0.00 2.44
341 343 1.081442 GCGGCCTGTGTACAAAAGC 60.081 57.895 0.00 0.00 0.00 3.51
342 344 1.515521 GCGGCCTGTGTACAAAAGCT 61.516 55.000 6.59 0.00 0.00 3.74
343 345 0.517316 CGGCCTGTGTACAAAAGCTC 59.483 55.000 6.59 0.00 0.00 4.09
344 346 0.517316 GGCCTGTGTACAAAAGCTCG 59.483 55.000 6.59 0.00 0.00 5.03
345 347 1.508632 GCCTGTGTACAAAAGCTCGA 58.491 50.000 0.00 0.00 0.00 4.04
346 348 1.871039 GCCTGTGTACAAAAGCTCGAA 59.129 47.619 0.00 0.00 0.00 3.71
347 349 2.484264 GCCTGTGTACAAAAGCTCGAAT 59.516 45.455 0.00 0.00 0.00 3.34
348 350 3.058224 GCCTGTGTACAAAAGCTCGAATT 60.058 43.478 0.00 0.00 0.00 2.17
350 352 4.378459 CCTGTGTACAAAAGCTCGAATTCC 60.378 45.833 0.00 0.00 0.00 3.01
351 353 4.385825 TGTGTACAAAAGCTCGAATTCCT 58.614 39.130 0.00 0.00 0.00 3.36
352 354 4.213270 TGTGTACAAAAGCTCGAATTCCTG 59.787 41.667 0.00 0.00 0.00 3.86
353 355 3.751175 TGTACAAAAGCTCGAATTCCTGG 59.249 43.478 0.00 0.00 0.00 4.45
354 356 2.162681 ACAAAAGCTCGAATTCCTGGG 58.837 47.619 0.00 0.00 0.00 4.45
355 357 2.224769 ACAAAAGCTCGAATTCCTGGGA 60.225 45.455 0.00 0.00 0.00 4.37
356 358 2.819608 CAAAAGCTCGAATTCCTGGGAA 59.180 45.455 4.43 4.43 38.59 3.97
357 359 3.372440 AAAGCTCGAATTCCTGGGAAT 57.628 42.857 8.88 8.88 45.67 3.01
358 360 2.629336 AGCTCGAATTCCTGGGAATC 57.371 50.000 14.33 8.05 43.26 2.52
359 361 1.839994 AGCTCGAATTCCTGGGAATCA 59.160 47.619 14.33 2.83 43.26 2.57
360 362 2.239654 AGCTCGAATTCCTGGGAATCAA 59.760 45.455 14.33 3.95 43.26 2.57
361 363 3.016736 GCTCGAATTCCTGGGAATCAAA 58.983 45.455 14.33 3.65 43.26 2.69
362 364 3.181496 GCTCGAATTCCTGGGAATCAAAC 60.181 47.826 14.33 6.91 43.26 2.93
363 365 4.009675 CTCGAATTCCTGGGAATCAAACA 58.990 43.478 14.33 0.00 43.26 2.83
364 366 4.402829 TCGAATTCCTGGGAATCAAACAA 58.597 39.130 14.33 0.00 43.26 2.83
365 367 4.458989 TCGAATTCCTGGGAATCAAACAAG 59.541 41.667 14.33 3.45 43.26 3.16
366 368 4.218417 CGAATTCCTGGGAATCAAACAAGT 59.782 41.667 14.33 0.00 43.26 3.16
367 369 5.278957 CGAATTCCTGGGAATCAAACAAGTT 60.279 40.000 14.33 0.00 43.26 2.66
368 370 6.072175 CGAATTCCTGGGAATCAAACAAGTTA 60.072 38.462 14.33 0.00 43.26 2.24
369 371 7.523052 CGAATTCCTGGGAATCAAACAAGTTAA 60.523 37.037 14.33 0.00 43.26 2.01
370 372 6.648879 TTCCTGGGAATCAAACAAGTTAAG 57.351 37.500 0.00 0.00 0.00 1.85
371 373 5.076873 TCCTGGGAATCAAACAAGTTAAGG 58.923 41.667 0.00 0.00 0.00 2.69
372 374 4.832823 CCTGGGAATCAAACAAGTTAAGGT 59.167 41.667 0.00 0.00 0.00 3.50
373 375 5.304357 CCTGGGAATCAAACAAGTTAAGGTT 59.696 40.000 0.00 0.00 0.00 3.50
374 376 6.492087 CCTGGGAATCAAACAAGTTAAGGTTA 59.508 38.462 0.00 0.00 0.00 2.85
375 377 7.178451 CCTGGGAATCAAACAAGTTAAGGTTAT 59.822 37.037 0.00 0.00 0.00 1.89
376 378 9.238368 CTGGGAATCAAACAAGTTAAGGTTATA 57.762 33.333 0.00 0.00 0.00 0.98
377 379 9.238368 TGGGAATCAAACAAGTTAAGGTTATAG 57.762 33.333 0.00 0.00 0.00 1.31
378 380 9.457436 GGGAATCAAACAAGTTAAGGTTATAGA 57.543 33.333 0.00 0.00 0.00 1.98
382 384 8.276252 TCAAACAAGTTAAGGTTATAGATGCC 57.724 34.615 0.00 0.00 0.00 4.40
383 385 7.885922 TCAAACAAGTTAAGGTTATAGATGCCA 59.114 33.333 0.00 0.00 0.00 4.92
396 398 1.476085 AGATGCCACGTCAGAGAGAAG 59.524 52.381 0.00 0.00 0.00 2.85
397 399 0.108424 ATGCCACGTCAGAGAGAAGC 60.108 55.000 0.00 0.00 0.00 3.86
398 400 1.181741 TGCCACGTCAGAGAGAAGCT 61.182 55.000 0.00 0.00 0.00 3.74
402 404 2.685388 CCACGTCAGAGAGAAGCTCATA 59.315 50.000 0.00 0.00 46.45 2.15
403 405 3.129462 CCACGTCAGAGAGAAGCTCATAA 59.871 47.826 0.00 0.00 46.45 1.90
405 407 5.164233 CACGTCAGAGAGAAGCTCATAAAA 58.836 41.667 0.00 0.00 46.45 1.52
407 409 6.312426 CACGTCAGAGAGAAGCTCATAAAAAT 59.688 38.462 0.00 0.00 46.45 1.82
408 410 6.533367 ACGTCAGAGAGAAGCTCATAAAAATC 59.467 38.462 0.00 0.00 46.45 2.17
409 411 6.533012 CGTCAGAGAGAAGCTCATAAAAATCA 59.467 38.462 0.00 0.00 46.45 2.57
410 412 7.254050 CGTCAGAGAGAAGCTCATAAAAATCAG 60.254 40.741 0.00 0.00 46.45 2.90
412 414 7.980662 TCAGAGAGAAGCTCATAAAAATCAGAG 59.019 37.037 0.00 0.00 46.45 3.35
445 463 6.384258 TTGCAACAACACTAGCTAAAATGA 57.616 33.333 0.00 0.00 0.00 2.57
447 465 7.680442 TGCAACAACACTAGCTAAAATGATA 57.320 32.000 0.00 0.00 0.00 2.15
448 466 8.279970 TGCAACAACACTAGCTAAAATGATAT 57.720 30.769 0.00 0.00 0.00 1.63
449 467 8.183536 TGCAACAACACTAGCTAAAATGATATG 58.816 33.333 0.00 0.40 0.00 1.78
452 470 8.131455 ACAACACTAGCTAAAATGATATGTCG 57.869 34.615 0.00 0.00 0.00 4.35
454 472 6.817184 ACACTAGCTAAAATGATATGTCGGT 58.183 36.000 0.00 0.00 0.00 4.69
455 473 6.701841 ACACTAGCTAAAATGATATGTCGGTG 59.298 38.462 0.00 0.00 0.00 4.94
456 474 6.701841 CACTAGCTAAAATGATATGTCGGTGT 59.298 38.462 0.00 0.00 0.00 4.16
458 476 6.363577 AGCTAAAATGATATGTCGGTGTTG 57.636 37.500 0.00 0.00 0.00 3.33
461 479 6.907212 GCTAAAATGATATGTCGGTGTTGAAG 59.093 38.462 0.00 0.00 0.00 3.02
462 480 7.201609 GCTAAAATGATATGTCGGTGTTGAAGA 60.202 37.037 0.00 0.00 0.00 2.87
463 481 6.668541 AAATGATATGTCGGTGTTGAAGAG 57.331 37.500 0.00 0.00 0.00 2.85
465 483 2.380084 TATGTCGGTGTTGAAGAGGC 57.620 50.000 0.00 0.00 0.00 4.70
466 484 0.687354 ATGTCGGTGTTGAAGAGGCT 59.313 50.000 0.00 0.00 0.00 4.58
467 485 0.033504 TGTCGGTGTTGAAGAGGCTC 59.966 55.000 6.34 6.34 0.00 4.70
468 486 1.009389 GTCGGTGTTGAAGAGGCTCG 61.009 60.000 9.22 0.00 0.00 5.03
471 489 0.390472 GGTGTTGAAGAGGCTCGGAG 60.390 60.000 9.22 0.00 0.00 4.63
485 503 2.124653 GGAGAGCTCCTCGGTCGA 60.125 66.667 10.93 0.00 46.16 4.20
487 505 1.652012 GAGAGCTCCTCGGTCGATG 59.348 63.158 10.93 0.00 44.71 3.84
488 506 1.077357 AGAGCTCCTCGGTCGATGT 60.077 57.895 10.93 0.00 44.71 3.06
489 507 1.064946 GAGCTCCTCGGTCGATGTG 59.935 63.158 0.87 0.00 0.00 3.21
491 509 1.226717 GCTCCTCGGTCGATGTGTC 60.227 63.158 0.00 0.00 0.00 3.67
504 522 3.931824 CGATGTGTCGTATCGTGTTAGA 58.068 45.455 0.00 0.00 42.78 2.10
506 524 4.607646 CGATGTGTCGTATCGTGTTAGATC 59.392 45.833 0.00 0.00 42.78 2.75
507 525 4.282950 TGTGTCGTATCGTGTTAGATCC 57.717 45.455 0.00 0.00 32.39 3.36
509 527 4.201881 TGTGTCGTATCGTGTTAGATCCAG 60.202 45.833 0.00 0.00 32.39 3.86
510 528 3.943381 TGTCGTATCGTGTTAGATCCAGT 59.057 43.478 0.00 0.00 32.39 4.00
511 529 4.034858 TGTCGTATCGTGTTAGATCCAGTC 59.965 45.833 0.00 0.00 32.39 3.51
512 530 4.272991 GTCGTATCGTGTTAGATCCAGTCT 59.727 45.833 0.00 0.00 41.11 3.24
513 531 4.880120 TCGTATCGTGTTAGATCCAGTCTT 59.120 41.667 0.00 0.00 38.42 3.01
514 532 5.007430 TCGTATCGTGTTAGATCCAGTCTTC 59.993 44.000 0.00 0.00 38.42 2.87
515 533 4.657436 ATCGTGTTAGATCCAGTCTTCC 57.343 45.455 0.00 0.00 38.42 3.46
516 534 2.422479 TCGTGTTAGATCCAGTCTTCCG 59.578 50.000 0.00 0.00 38.42 4.30
517 535 2.479730 CGTGTTAGATCCAGTCTTCCGG 60.480 54.545 0.00 0.00 38.42 5.14
518 536 2.108168 TGTTAGATCCAGTCTTCCGGG 58.892 52.381 0.00 0.00 38.42 5.73
519 537 1.120530 TTAGATCCAGTCTTCCGGGC 58.879 55.000 0.00 0.00 38.42 6.13
520 538 0.261991 TAGATCCAGTCTTCCGGGCT 59.738 55.000 0.00 0.00 38.42 5.19
522 540 0.462759 GATCCAGTCTTCCGGGCTTG 60.463 60.000 0.00 0.00 0.00 4.01
523 541 0.909610 ATCCAGTCTTCCGGGCTTGA 60.910 55.000 0.00 0.00 0.00 3.02
524 542 0.909610 TCCAGTCTTCCGGGCTTGAT 60.910 55.000 0.00 0.00 0.00 2.57
525 543 0.745845 CCAGTCTTCCGGGCTTGATG 60.746 60.000 0.00 0.00 0.00 3.07
527 545 0.250513 AGTCTTCCGGGCTTGATGTC 59.749 55.000 0.00 0.00 0.00 3.06
528 546 0.250513 GTCTTCCGGGCTTGATGTCT 59.749 55.000 0.00 0.00 0.00 3.41
529 547 1.480954 GTCTTCCGGGCTTGATGTCTA 59.519 52.381 0.00 0.00 0.00 2.59
530 548 2.103263 GTCTTCCGGGCTTGATGTCTAT 59.897 50.000 0.00 0.00 0.00 1.98
531 549 2.365617 TCTTCCGGGCTTGATGTCTATC 59.634 50.000 0.00 0.00 0.00 2.08
532 550 0.673985 TCCGGGCTTGATGTCTATCG 59.326 55.000 0.00 0.00 36.04 2.92
533 551 0.389391 CCGGGCTTGATGTCTATCGT 59.611 55.000 0.00 0.00 36.04 3.73
534 552 1.491670 CGGGCTTGATGTCTATCGTG 58.508 55.000 0.00 0.00 36.04 4.35
535 553 1.869754 CGGGCTTGATGTCTATCGTGG 60.870 57.143 0.00 0.00 36.04 4.94
536 554 1.221414 GGCTTGATGTCTATCGTGGC 58.779 55.000 0.00 0.00 36.04 5.01
537 555 1.202580 GGCTTGATGTCTATCGTGGCT 60.203 52.381 0.00 0.00 36.04 4.75
538 556 2.131183 GCTTGATGTCTATCGTGGCTC 58.869 52.381 0.00 0.00 36.04 4.70
539 557 2.389059 CTTGATGTCTATCGTGGCTCG 58.611 52.381 1.94 1.94 36.04 5.03
540 558 1.389555 TGATGTCTATCGTGGCTCGT 58.610 50.000 8.94 0.00 40.80 4.18
541 559 1.749063 TGATGTCTATCGTGGCTCGTT 59.251 47.619 8.94 3.32 40.80 3.85
543 561 3.379057 TGATGTCTATCGTGGCTCGTTAA 59.621 43.478 8.94 0.00 40.80 2.01
544 562 3.141002 TGTCTATCGTGGCTCGTTAAC 57.859 47.619 8.94 0.00 40.80 2.01
546 564 1.739466 TCTATCGTGGCTCGTTAACGT 59.261 47.619 25.98 8.18 40.80 3.99
547 565 2.107178 CTATCGTGGCTCGTTAACGTC 58.893 52.381 25.98 18.35 40.80 4.34
548 566 0.524862 ATCGTGGCTCGTTAACGTCT 59.475 50.000 25.98 2.63 40.80 4.18
549 567 0.311790 TCGTGGCTCGTTAACGTCTT 59.688 50.000 25.98 0.00 40.80 3.01
551 569 1.665161 CGTGGCTCGTTAACGTCTTCT 60.665 52.381 25.98 0.00 40.80 2.85
552 570 1.719780 GTGGCTCGTTAACGTCTTCTG 59.280 52.381 25.98 12.05 40.80 3.02
553 571 1.610038 TGGCTCGTTAACGTCTTCTGA 59.390 47.619 25.98 5.56 40.80 3.27
554 572 1.984297 GGCTCGTTAACGTCTTCTGAC 59.016 52.381 25.98 10.10 40.80 3.51
555 573 2.351544 GGCTCGTTAACGTCTTCTGACT 60.352 50.000 25.98 0.00 40.86 3.41
556 574 3.120060 GGCTCGTTAACGTCTTCTGACTA 60.120 47.826 25.98 3.39 40.86 2.59
557 575 4.090034 GCTCGTTAACGTCTTCTGACTAG 58.910 47.826 25.98 13.52 40.86 2.57
558 576 4.649977 CTCGTTAACGTCTTCTGACTAGG 58.350 47.826 25.98 0.00 40.86 3.02
560 578 3.427233 CGTTAACGTCTTCTGACTAGGGG 60.427 52.174 19.75 0.00 40.86 4.79
562 580 2.305858 ACGTCTTCTGACTAGGGGTT 57.694 50.000 0.00 0.00 40.86 4.11
563 581 2.606378 ACGTCTTCTGACTAGGGGTTT 58.394 47.619 0.00 0.00 40.86 3.27
564 582 2.970640 ACGTCTTCTGACTAGGGGTTTT 59.029 45.455 0.00 0.00 40.86 2.43
565 583 3.390311 ACGTCTTCTGACTAGGGGTTTTT 59.610 43.478 0.00 0.00 40.86 1.94
567 585 4.262506 CGTCTTCTGACTAGGGGTTTTTCT 60.263 45.833 0.00 0.00 40.86 2.52
570 588 4.891992 TCTGACTAGGGGTTTTTCTCAG 57.108 45.455 0.00 0.00 0.00 3.35
571 589 4.232091 TCTGACTAGGGGTTTTTCTCAGT 58.768 43.478 0.00 0.00 0.00 3.41
572 590 4.040461 TCTGACTAGGGGTTTTTCTCAGTG 59.960 45.833 0.00 0.00 0.00 3.66
574 592 4.202326 TGACTAGGGGTTTTTCTCAGTGTC 60.202 45.833 0.00 0.00 0.00 3.67
584 602 3.407424 TTCTCAGTGTCAAGATGTGGG 57.593 47.619 0.00 0.00 0.00 4.61
592 610 1.541588 GTCAAGATGTGGGCCAACTTC 59.458 52.381 16.78 16.78 34.26 3.01
613 631 3.452786 TGCTCTCCTTCTCCGGCG 61.453 66.667 0.00 0.00 0.00 6.46
698 716 5.299028 TCATCTTTGCTTTCTGTTGCTTGTA 59.701 36.000 0.00 0.00 0.00 2.41
711 729 0.702383 GCTTGTATGCGTTGCGTTTG 59.298 50.000 0.00 0.00 0.00 2.93
714 732 2.025544 TGTATGCGTTGCGTTTGTTC 57.974 45.000 0.00 0.00 0.00 3.18
731 749 6.034150 CGTTTGTTCGCTGTATTGTCACTATA 59.966 38.462 0.00 0.00 0.00 1.31
735 753 8.570096 TGTTCGCTGTATTGTCACTATATTAC 57.430 34.615 0.00 0.00 0.00 1.89
814 832 0.036010 CCTCCAAGACGCACTCCATT 60.036 55.000 0.00 0.00 0.00 3.16
867 886 1.635817 ATACCGTCCCCTTGCAGCAT 61.636 55.000 0.00 0.00 0.00 3.79
887 906 8.372023 CAGCATAGTACTGAAAGCAATGGCTC 62.372 46.154 5.39 0.00 43.22 4.70
896 915 2.190578 CAATGGCTCCTCCGGTCC 59.809 66.667 0.00 0.00 37.80 4.46
901 920 3.462678 GCTCCTCCGGTCCCTGTC 61.463 72.222 0.00 0.00 0.00 3.51
902 921 3.141488 CTCCTCCGGTCCCTGTCG 61.141 72.222 0.00 0.00 0.00 4.35
924 946 4.084328 CGCGGTGATCCAGATTTTAGATTC 60.084 45.833 0.00 0.00 0.00 2.52
927 949 6.293135 GCGGTGATCCAGATTTTAGATTCTTC 60.293 42.308 0.00 0.00 0.00 2.87
949 973 1.068741 GTCAGTTATCCCCCACGCTAG 59.931 57.143 0.00 0.00 0.00 3.42
990 1020 2.492090 CTGCCGGGAGAGAGAACG 59.508 66.667 19.84 0.00 0.00 3.95
1041 1071 1.653151 GCTTAAGGACGCCGATCTTT 58.347 50.000 4.29 0.00 0.00 2.52
1234 1360 4.891566 GCTCGACGATTCCTGTGT 57.108 55.556 0.00 0.00 0.00 3.72
1273 1410 5.382303 CGGTAACTTCTGCTAAAACATGTG 58.618 41.667 0.00 0.00 0.00 3.21
1281 1418 2.482336 TGCTAAAACATGTGATCGCGTT 59.518 40.909 5.77 0.00 0.00 4.84
1441 1578 2.596904 TAGCATAAGCCGTCAGTTCC 57.403 50.000 0.00 0.00 43.56 3.62
1451 1588 2.480419 GCCGTCAGTTCCATATATGCAC 59.520 50.000 7.24 6.23 0.00 4.57
1556 1693 5.351465 TCGACCTGAATCAGCTAACAAAATC 59.649 40.000 4.40 0.00 0.00 2.17
1630 1767 4.099727 GGGGTCTACCTGAACTTGATAGTC 59.900 50.000 0.00 0.00 40.03 2.59
1779 1916 0.391263 ACGGTTTTGATCGGCCTCTC 60.391 55.000 0.00 0.00 0.00 3.20
1799 1936 3.571571 TCCATTTCTGTCGTCGTAAGTG 58.428 45.455 0.00 0.00 39.48 3.16
1800 1937 3.253921 TCCATTTCTGTCGTCGTAAGTGA 59.746 43.478 0.00 0.00 39.48 3.41
1801 1938 4.082408 TCCATTTCTGTCGTCGTAAGTGAT 60.082 41.667 0.00 0.00 39.48 3.06
1802 1939 4.031765 CCATTTCTGTCGTCGTAAGTGATG 59.968 45.833 0.00 1.59 39.48 3.07
1851 1992 0.610687 GCAACCCTGCTACTCTGACT 59.389 55.000 0.00 0.00 45.74 3.41
2173 2314 1.549037 GGGACATTGCTGGTTTGGGTA 60.549 52.381 0.00 0.00 0.00 3.69
2187 2328 2.409064 TGGGTAGAGGACAAGGTGAA 57.591 50.000 0.00 0.00 0.00 3.18
2317 2458 3.426568 GGCGTGCTCCAAGTGCTC 61.427 66.667 0.00 0.00 0.00 4.26
2320 2461 2.375766 CGTGCTCCAAGTGCTCGTC 61.376 63.158 0.00 0.00 40.85 4.20
2365 2506 4.664677 GTGCCTGACGACGCCACT 62.665 66.667 0.00 0.00 0.00 4.00
2369 2510 1.079819 CCTGACGACGCCACTGAAT 60.080 57.895 0.00 0.00 0.00 2.57
2494 2635 9.950680 GTGTTGATTTTAATCAGAGTTTCAGAA 57.049 29.630 5.41 0.00 45.35 3.02
2513 2654 3.620374 AGAATAAATGCTCTGCGAGTGTG 59.380 43.478 7.27 0.00 31.39 3.82
2605 2746 3.612247 ATGGAGGCTGTGCACGGTC 62.612 63.158 22.88 22.88 0.00 4.79
3130 3297 3.737850 GCTCGGGAATCTGATCAATTCT 58.262 45.455 20.33 0.11 34.29 2.40
3210 3377 1.518056 CCGGAAATGGATGATGGGCG 61.518 60.000 0.00 0.00 0.00 6.13
3265 3432 1.202290 ACTTTGCTCAACTTTGCCGTG 60.202 47.619 0.00 0.00 0.00 4.94
3280 3447 1.437160 CGTGTTTGTTGCCCTTGCT 59.563 52.632 0.00 0.00 38.71 3.91
3295 3462 3.305813 CCCTTGCTAAGAACTACACGTCA 60.306 47.826 0.00 0.00 0.00 4.35
3419 3589 1.614317 CCAGATTGGGGGTGACAACTC 60.614 57.143 0.00 0.00 32.67 3.01
3437 3607 2.660064 CGGGAGGGTGAAGAGGTGG 61.660 68.421 0.00 0.00 0.00 4.61
3438 3608 2.301738 GGGAGGGTGAAGAGGTGGG 61.302 68.421 0.00 0.00 0.00 4.61
3440 3610 0.840722 GGAGGGTGAAGAGGTGGGAA 60.841 60.000 0.00 0.00 0.00 3.97
3442 3612 1.423921 GAGGGTGAAGAGGTGGGAAAA 59.576 52.381 0.00 0.00 0.00 2.29
3443 3613 1.425448 AGGGTGAAGAGGTGGGAAAAG 59.575 52.381 0.00 0.00 0.00 2.27
3444 3614 1.423921 GGGTGAAGAGGTGGGAAAAGA 59.576 52.381 0.00 0.00 0.00 2.52
3446 3616 3.500471 GGGTGAAGAGGTGGGAAAAGAAT 60.500 47.826 0.00 0.00 0.00 2.40
3447 3617 4.152647 GGTGAAGAGGTGGGAAAAGAATT 58.847 43.478 0.00 0.00 0.00 2.17
3448 3618 4.218635 GGTGAAGAGGTGGGAAAAGAATTC 59.781 45.833 0.00 0.00 0.00 2.17
3449 3619 5.073428 GTGAAGAGGTGGGAAAAGAATTCT 58.927 41.667 0.88 0.88 0.00 2.40
3450 3620 6.238648 GTGAAGAGGTGGGAAAAGAATTCTA 58.761 40.000 8.75 0.00 0.00 2.10
3451 3621 6.887002 GTGAAGAGGTGGGAAAAGAATTCTAT 59.113 38.462 8.75 0.41 0.00 1.98
3452 3622 6.886459 TGAAGAGGTGGGAAAAGAATTCTATG 59.114 38.462 8.75 0.00 0.00 2.23
3453 3623 6.642733 AGAGGTGGGAAAAGAATTCTATGA 57.357 37.500 8.75 0.00 0.00 2.15
3454 3624 6.657875 AGAGGTGGGAAAAGAATTCTATGAG 58.342 40.000 8.75 0.00 0.00 2.90
3455 3625 6.445139 AGAGGTGGGAAAAGAATTCTATGAGA 59.555 38.462 8.75 0.00 0.00 3.27
3456 3626 6.418946 AGGTGGGAAAAGAATTCTATGAGAC 58.581 40.000 8.75 2.06 0.00 3.36
3457 3627 5.590663 GGTGGGAAAAGAATTCTATGAGACC 59.409 44.000 8.75 7.44 0.00 3.85
3458 3628 6.180472 GTGGGAAAAGAATTCTATGAGACCA 58.820 40.000 8.75 9.93 0.00 4.02
3459 3629 6.317391 GTGGGAAAAGAATTCTATGAGACCAG 59.683 42.308 8.75 0.00 0.00 4.00
3460 3630 5.825151 GGGAAAAGAATTCTATGAGACCAGG 59.175 44.000 8.75 0.00 0.00 4.45
3461 3631 6.418946 GGAAAAGAATTCTATGAGACCAGGT 58.581 40.000 8.75 0.00 0.00 4.00
3462 3632 6.540551 GGAAAAGAATTCTATGAGACCAGGTC 59.459 42.308 12.25 12.25 0.00 3.85
3463 3633 6.882768 AAAGAATTCTATGAGACCAGGTCT 57.117 37.500 23.18 23.18 46.42 3.85
3470 3640 2.526628 AGACCAGGTCTCACGGGT 59.473 61.111 17.31 0.00 38.71 5.28
3471 3641 1.152312 AGACCAGGTCTCACGGGTT 60.152 57.895 17.31 0.00 38.71 4.11
3472 3642 0.113776 AGACCAGGTCTCACGGGTTA 59.886 55.000 17.31 0.00 38.71 2.85
3473 3643 0.531200 GACCAGGTCTCACGGGTTAG 59.469 60.000 12.94 0.00 32.77 2.34
3474 3644 1.218316 CCAGGTCTCACGGGTTAGC 59.782 63.158 0.00 0.00 0.00 3.09
3475 3645 1.541310 CCAGGTCTCACGGGTTAGCA 61.541 60.000 0.00 0.00 0.00 3.49
3476 3646 0.108615 CAGGTCTCACGGGTTAGCAG 60.109 60.000 0.00 0.00 0.00 4.24
3477 3647 1.218316 GGTCTCACGGGTTAGCAGG 59.782 63.158 0.00 0.00 0.00 4.85
3478 3648 1.542187 GGTCTCACGGGTTAGCAGGT 61.542 60.000 0.00 0.00 0.00 4.00
3479 3649 0.389948 GTCTCACGGGTTAGCAGGTG 60.390 60.000 0.00 0.00 0.00 4.00
3480 3650 0.541063 TCTCACGGGTTAGCAGGTGA 60.541 55.000 7.19 7.19 37.77 4.02
3481 3651 1.972198 TCACGGGTTAGCAGGTGAG 59.028 57.895 3.98 0.00 34.71 3.51
3482 3652 0.541063 TCACGGGTTAGCAGGTGAGA 60.541 55.000 3.98 0.00 34.71 3.27
3483 3653 0.389948 CACGGGTTAGCAGGTGAGAC 60.390 60.000 0.00 0.00 32.23 3.36
3484 3654 1.218316 CGGGTTAGCAGGTGAGACC 59.782 63.158 0.00 0.00 38.99 3.85
3485 3655 1.602771 GGGTTAGCAGGTGAGACCC 59.397 63.158 5.28 5.28 39.75 4.46
3486 3656 2.372852 GGTTAGCAGGTGAGACCCA 58.627 57.895 0.00 0.00 39.75 4.51
3487 3657 0.690762 GGTTAGCAGGTGAGACCCAA 59.309 55.000 0.00 0.00 39.75 4.12
3488 3658 1.610886 GGTTAGCAGGTGAGACCCAAC 60.611 57.143 0.00 0.00 39.75 3.77
3489 3659 0.690762 TTAGCAGGTGAGACCCAACC 59.309 55.000 0.00 0.00 39.75 3.77
3490 3660 0.178903 TAGCAGGTGAGACCCAACCT 60.179 55.000 0.00 0.00 39.75 3.50
3493 3663 3.502086 AGGTGAGACCCAACCTGAT 57.498 52.632 0.00 0.00 39.75 2.90
3494 3664 0.987294 AGGTGAGACCCAACCTGATG 59.013 55.000 0.00 0.00 39.75 3.07
3495 3665 0.035056 GGTGAGACCCAACCTGATGG 60.035 60.000 0.00 0.00 40.35 3.51
3496 3666 0.984230 GTGAGACCCAACCTGATGGA 59.016 55.000 0.00 0.00 43.54 3.41
3497 3667 1.561542 GTGAGACCCAACCTGATGGAT 59.438 52.381 0.00 0.00 43.54 3.41
3498 3668 1.561076 TGAGACCCAACCTGATGGATG 59.439 52.381 0.00 0.00 43.54 3.51
3499 3669 1.839994 GAGACCCAACCTGATGGATGA 59.160 52.381 0.00 0.00 43.54 2.92
3500 3670 1.561542 AGACCCAACCTGATGGATGAC 59.438 52.381 0.00 0.00 43.54 3.06
3501 3671 1.281867 GACCCAACCTGATGGATGACA 59.718 52.381 0.00 0.00 43.54 3.58
3502 3672 1.004745 ACCCAACCTGATGGATGACAC 59.995 52.381 0.00 0.00 43.54 3.67
3503 3673 1.004628 CCCAACCTGATGGATGACACA 59.995 52.381 0.00 0.00 43.54 3.72
3504 3674 2.357465 CCCAACCTGATGGATGACACAT 60.357 50.000 0.00 0.00 43.54 3.21
3505 3675 2.686405 CCAACCTGATGGATGACACATG 59.314 50.000 0.00 0.00 43.54 3.21
3506 3676 2.686405 CAACCTGATGGATGACACATGG 59.314 50.000 0.00 0.00 38.26 3.66
3507 3677 1.315690 CCTGATGGATGACACATGGC 58.684 55.000 0.00 0.00 34.57 4.40
3508 3678 1.409101 CCTGATGGATGACACATGGCA 60.409 52.381 0.00 0.00 37.54 4.92
3510 3680 2.956333 CTGATGGATGACACATGGCATT 59.044 45.455 0.78 0.00 45.42 3.56
3511 3681 2.953648 TGATGGATGACACATGGCATTC 59.046 45.455 0.78 0.00 45.42 2.67
3512 3682 2.510928 TGGATGACACATGGCATTCA 57.489 45.000 4.43 4.43 46.54 2.57
3513 3683 2.093890 TGGATGACACATGGCATTCAC 58.906 47.619 4.43 0.00 43.95 3.18
3514 3684 2.093890 GGATGACACATGGCATTCACA 58.906 47.619 0.78 0.00 45.42 3.58
3515 3685 2.492881 GGATGACACATGGCATTCACAA 59.507 45.455 0.78 0.00 45.42 3.33
3516 3686 3.056678 GGATGACACATGGCATTCACAAA 60.057 43.478 0.78 0.00 45.42 2.83
3517 3687 4.382254 GGATGACACATGGCATTCACAAAT 60.382 41.667 0.78 0.00 45.42 2.32
3518 3688 4.177165 TGACACATGGCATTCACAAATC 57.823 40.909 0.00 0.00 0.00 2.17
3519 3689 3.573110 TGACACATGGCATTCACAAATCA 59.427 39.130 0.00 0.00 0.00 2.57
3520 3690 3.916761 ACACATGGCATTCACAAATCAC 58.083 40.909 0.00 0.00 0.00 3.06
3521 3691 3.321396 ACACATGGCATTCACAAATCACA 59.679 39.130 0.00 0.00 0.00 3.58
3522 3692 4.202233 ACACATGGCATTCACAAATCACAA 60.202 37.500 0.00 0.00 0.00 3.33
3523 3693 4.750598 CACATGGCATTCACAAATCACAAA 59.249 37.500 0.00 0.00 0.00 2.83
3524 3694 5.236695 CACATGGCATTCACAAATCACAAAA 59.763 36.000 0.00 0.00 0.00 2.44
3525 3695 5.236911 ACATGGCATTCACAAATCACAAAAC 59.763 36.000 0.00 0.00 0.00 2.43
3526 3696 4.763073 TGGCATTCACAAATCACAAAACA 58.237 34.783 0.00 0.00 0.00 2.83
3527 3697 5.366460 TGGCATTCACAAATCACAAAACAT 58.634 33.333 0.00 0.00 0.00 2.71
3528 3698 5.466058 TGGCATTCACAAATCACAAAACATC 59.534 36.000 0.00 0.00 0.00 3.06
3529 3699 5.697633 GGCATTCACAAATCACAAAACATCT 59.302 36.000 0.00 0.00 0.00 2.90
3562 3732 7.050377 TGTGGATGAGAATTTAAGGAGATGTC 58.950 38.462 0.00 0.00 0.00 3.06
3913 4083 2.170187 AGATGCTGAGTTGGAGATGGAC 59.830 50.000 0.00 0.00 0.00 4.02
3995 4165 2.565834 GGTCTTACCTGTGTGAAGCCTA 59.434 50.000 0.00 0.00 34.73 3.93
4024 4194 9.102453 GTCTCTATTGGGGGAACTAAATATAGT 57.898 37.037 0.00 0.00 44.33 2.12
4067 4237 3.091633 AGGGATGGTTTGGAATGTGAG 57.908 47.619 0.00 0.00 0.00 3.51
4310 4481 6.094603 GTCAATGTTGAGATTGGCATCTACTT 59.905 38.462 1.13 0.00 40.14 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.135170 GTAGACTCGTGTTGGGCCTAC 60.135 57.143 11.39 11.39 0.00 3.18
1 2 1.180029 GTAGACTCGTGTTGGGCCTA 58.820 55.000 4.53 0.00 0.00 3.93
2 3 0.830444 TGTAGACTCGTGTTGGGCCT 60.830 55.000 4.53 0.00 0.00 5.19
3 4 0.034337 TTGTAGACTCGTGTTGGGCC 59.966 55.000 0.00 0.00 0.00 5.80
4 5 1.000506 TCTTGTAGACTCGTGTTGGGC 59.999 52.381 0.00 0.00 0.00 5.36
5 6 3.005472 TCTTCTTGTAGACTCGTGTTGGG 59.995 47.826 0.00 0.00 0.00 4.12
6 7 4.238761 TCTTCTTGTAGACTCGTGTTGG 57.761 45.455 0.00 0.00 0.00 3.77
7 8 4.681942 CCTTCTTCTTGTAGACTCGTGTTG 59.318 45.833 0.00 0.00 0.00 3.33
8 9 4.341520 ACCTTCTTCTTGTAGACTCGTGTT 59.658 41.667 0.00 0.00 0.00 3.32
9 10 3.890147 ACCTTCTTCTTGTAGACTCGTGT 59.110 43.478 0.00 0.00 0.00 4.49
10 11 4.506886 ACCTTCTTCTTGTAGACTCGTG 57.493 45.455 0.00 0.00 0.00 4.35
11 12 4.796618 GCAACCTTCTTCTTGTAGACTCGT 60.797 45.833 0.00 0.00 0.00 4.18
12 13 3.675698 GCAACCTTCTTCTTGTAGACTCG 59.324 47.826 0.00 0.00 0.00 4.18
13 14 3.675698 CGCAACCTTCTTCTTGTAGACTC 59.324 47.826 0.00 0.00 0.00 3.36
14 15 3.069729 ACGCAACCTTCTTCTTGTAGACT 59.930 43.478 0.00 0.00 0.00 3.24
15 16 3.391049 ACGCAACCTTCTTCTTGTAGAC 58.609 45.455 0.00 0.00 0.00 2.59
16 17 3.746045 ACGCAACCTTCTTCTTGTAGA 57.254 42.857 0.00 0.00 0.00 2.59
17 18 4.557205 ACTACGCAACCTTCTTCTTGTAG 58.443 43.478 0.00 0.00 35.40 2.74
18 19 4.595762 ACTACGCAACCTTCTTCTTGTA 57.404 40.909 0.00 0.00 0.00 2.41
19 20 3.470645 ACTACGCAACCTTCTTCTTGT 57.529 42.857 0.00 0.00 0.00 3.16
20 21 4.621886 GTCTACTACGCAACCTTCTTCTTG 59.378 45.833 0.00 0.00 0.00 3.02
21 22 4.280174 TGTCTACTACGCAACCTTCTTCTT 59.720 41.667 0.00 0.00 0.00 2.52
22 23 3.825014 TGTCTACTACGCAACCTTCTTCT 59.175 43.478 0.00 0.00 0.00 2.85
23 24 4.170292 TGTCTACTACGCAACCTTCTTC 57.830 45.455 0.00 0.00 0.00 2.87
24 25 4.219944 TGATGTCTACTACGCAACCTTCTT 59.780 41.667 0.00 0.00 0.00 2.52
25 26 3.762288 TGATGTCTACTACGCAACCTTCT 59.238 43.478 0.00 0.00 0.00 2.85
26 27 3.858238 GTGATGTCTACTACGCAACCTTC 59.142 47.826 0.00 0.00 0.00 3.46
27 28 3.510360 AGTGATGTCTACTACGCAACCTT 59.490 43.478 0.00 0.00 0.00 3.50
28 29 3.090037 AGTGATGTCTACTACGCAACCT 58.910 45.455 0.00 0.00 0.00 3.50
29 30 3.179830 CAGTGATGTCTACTACGCAACC 58.820 50.000 0.00 0.00 0.00 3.77
30 31 3.834610 ACAGTGATGTCTACTACGCAAC 58.165 45.455 0.00 0.00 0.00 4.17
31 32 3.504520 TGACAGTGATGTCTACTACGCAA 59.495 43.478 9.57 0.00 39.41 4.85
32 33 3.078837 TGACAGTGATGTCTACTACGCA 58.921 45.455 9.57 0.00 39.41 5.24
33 34 3.759527 TGACAGTGATGTCTACTACGC 57.240 47.619 9.57 0.00 39.41 4.42
34 35 5.236655 ACATGACAGTGATGTCTACTACG 57.763 43.478 0.00 0.00 39.41 3.51
41 42 3.599730 TGGAGACATGACAGTGATGTC 57.400 47.619 21.88 21.88 46.85 3.06
75 76 5.885912 AGTCAAATTGGTAAATAGGACGCAT 59.114 36.000 0.00 0.00 35.60 4.73
83 84 7.551262 ACAGTGCGATAGTCAAATTGGTAAATA 59.449 33.333 0.00 0.00 39.35 1.40
100 101 0.034756 TACAGCAACCACAGTGCGAT 59.965 50.000 0.00 0.00 0.00 4.58
104 105 1.512926 GGAGTACAGCAACCACAGTG 58.487 55.000 0.00 0.00 0.00 3.66
110 111 1.880027 CTGTTTGGGAGTACAGCAACC 59.120 52.381 0.00 0.00 35.79 3.77
132 133 4.509600 GCAACATCTAGTATGAACAGCCTC 59.490 45.833 8.56 0.00 0.00 4.70
134 135 3.561725 GGCAACATCTAGTATGAACAGCC 59.438 47.826 8.56 0.00 0.00 4.85
158 159 2.593725 CGGCCCAGATGATGCCTG 60.594 66.667 0.00 0.00 43.12 4.85
196 197 9.086336 ACATTTCGTCATAAAGGCAAAATTATG 57.914 29.630 0.00 0.00 39.67 1.90
198 199 9.134734 GAACATTTCGTCATAAAGGCAAAATTA 57.865 29.630 0.00 0.00 0.00 1.40
252 253 7.094377 GCTTTGATGTAATACCTGTTTCCAGAA 60.094 37.037 0.00 0.00 41.50 3.02
254 255 6.150976 TGCTTTGATGTAATACCTGTTTCCAG 59.849 38.462 0.00 0.00 38.50 3.86
255 256 6.007076 TGCTTTGATGTAATACCTGTTTCCA 58.993 36.000 0.00 0.00 0.00 3.53
260 262 7.066284 GTCAAGATGCTTTGATGTAATACCTGT 59.934 37.037 2.98 0.00 39.13 4.00
263 265 7.066284 AGTGTCAAGATGCTTTGATGTAATACC 59.934 37.037 2.98 0.00 39.13 2.73
281 283 5.391736 GCATCTCCATTTCTTCAGTGTCAAG 60.392 44.000 0.00 0.00 0.00 3.02
282 284 4.456911 GCATCTCCATTTCTTCAGTGTCAA 59.543 41.667 0.00 0.00 0.00 3.18
283 285 4.005650 GCATCTCCATTTCTTCAGTGTCA 58.994 43.478 0.00 0.00 0.00 3.58
285 287 3.755378 GTGCATCTCCATTTCTTCAGTGT 59.245 43.478 0.00 0.00 0.00 3.55
286 288 4.008330 AGTGCATCTCCATTTCTTCAGTG 58.992 43.478 0.00 0.00 0.00 3.66
287 289 4.298103 AGTGCATCTCCATTTCTTCAGT 57.702 40.909 0.00 0.00 0.00 3.41
290 292 6.541641 ACTCAATAGTGCATCTCCATTTCTTC 59.458 38.462 0.00 0.00 33.57 2.87
291 293 6.421485 ACTCAATAGTGCATCTCCATTTCTT 58.579 36.000 0.00 0.00 33.57 2.52
292 294 5.999044 ACTCAATAGTGCATCTCCATTTCT 58.001 37.500 0.00 0.00 33.57 2.52
293 295 6.690194 AACTCAATAGTGCATCTCCATTTC 57.310 37.500 0.00 0.00 35.62 2.17
294 296 6.626623 GCAAACTCAATAGTGCATCTCCATTT 60.627 38.462 0.00 0.00 35.62 2.32
295 297 5.163581 GCAAACTCAATAGTGCATCTCCATT 60.164 40.000 0.00 0.00 35.62 3.16
297 299 3.691118 GCAAACTCAATAGTGCATCTCCA 59.309 43.478 0.00 0.00 35.62 3.86
298 300 3.691118 TGCAAACTCAATAGTGCATCTCC 59.309 43.478 0.00 0.00 35.62 3.71
299 301 4.952262 TGCAAACTCAATAGTGCATCTC 57.048 40.909 0.00 0.00 35.62 2.75
302 304 3.488047 GCGATGCAAACTCAATAGTGCAT 60.488 43.478 9.57 9.57 44.01 3.96
303 305 2.159531 GCGATGCAAACTCAATAGTGCA 60.160 45.455 0.00 0.00 38.55 4.57
304 306 2.444351 GCGATGCAAACTCAATAGTGC 58.556 47.619 0.00 0.00 35.62 4.40
305 307 2.537529 CCGCGATGCAAACTCAATAGTG 60.538 50.000 8.23 0.00 35.62 2.74
306 308 1.665679 CCGCGATGCAAACTCAATAGT 59.334 47.619 8.23 0.00 37.65 2.12
308 310 0.376852 GCCGCGATGCAAACTCAATA 59.623 50.000 8.23 0.00 0.00 1.90
309 311 1.137404 GCCGCGATGCAAACTCAAT 59.863 52.632 8.23 0.00 0.00 2.57
310 312 2.560861 GCCGCGATGCAAACTCAA 59.439 55.556 8.23 0.00 0.00 3.02
311 313 3.430862 GGCCGCGATGCAAACTCA 61.431 61.111 8.23 0.00 0.00 3.41
312 314 3.127533 AGGCCGCGATGCAAACTC 61.128 61.111 8.23 0.00 0.00 3.01
313 315 3.434319 CAGGCCGCGATGCAAACT 61.434 61.111 8.23 0.00 0.00 2.66
314 316 3.737172 ACAGGCCGCGATGCAAAC 61.737 61.111 8.23 0.00 0.00 2.93
315 317 3.736100 CACAGGCCGCGATGCAAA 61.736 61.111 8.23 0.00 0.00 3.68
316 318 3.597675 TACACAGGCCGCGATGCAA 62.598 57.895 8.23 0.00 0.00 4.08
318 320 3.564027 GTACACAGGCCGCGATGC 61.564 66.667 8.23 2.32 0.00 3.91
320 322 0.604243 TTTTGTACACAGGCCGCGAT 60.604 50.000 8.23 0.00 0.00 4.58
321 323 1.225376 CTTTTGTACACAGGCCGCGA 61.225 55.000 8.23 0.00 0.00 5.87
322 324 1.206578 CTTTTGTACACAGGCCGCG 59.793 57.895 0.00 0.00 0.00 6.46
323 325 1.081442 GCTTTTGTACACAGGCCGC 60.081 57.895 4.86 0.00 0.00 6.53
324 326 0.517316 GAGCTTTTGTACACAGGCCG 59.483 55.000 12.03 0.00 0.00 6.13
325 327 0.517316 CGAGCTTTTGTACACAGGCC 59.483 55.000 12.03 0.00 0.00 5.19
328 330 4.452455 AGGAATTCGAGCTTTTGTACACAG 59.548 41.667 0.00 0.00 0.00 3.66
329 331 4.213270 CAGGAATTCGAGCTTTTGTACACA 59.787 41.667 0.00 0.00 0.00 3.72
330 332 4.378459 CCAGGAATTCGAGCTTTTGTACAC 60.378 45.833 0.00 0.00 0.00 2.90
331 333 3.751175 CCAGGAATTCGAGCTTTTGTACA 59.249 43.478 0.00 0.00 0.00 2.90
332 334 3.127030 CCCAGGAATTCGAGCTTTTGTAC 59.873 47.826 0.00 0.00 0.00 2.90
333 335 3.008594 TCCCAGGAATTCGAGCTTTTGTA 59.991 43.478 0.00 0.00 0.00 2.41
334 336 2.162681 CCCAGGAATTCGAGCTTTTGT 58.837 47.619 0.00 0.00 0.00 2.83
335 337 2.436417 TCCCAGGAATTCGAGCTTTTG 58.564 47.619 0.00 0.00 0.00 2.44
336 338 2.879103 TCCCAGGAATTCGAGCTTTT 57.121 45.000 0.00 0.00 0.00 2.27
338 340 2.239654 TGATTCCCAGGAATTCGAGCTT 59.760 45.455 13.08 0.00 43.98 3.74
339 341 1.839994 TGATTCCCAGGAATTCGAGCT 59.160 47.619 13.08 0.00 43.98 4.09
341 343 4.009675 TGTTTGATTCCCAGGAATTCGAG 58.990 43.478 13.08 0.00 43.98 4.04
342 344 4.027674 TGTTTGATTCCCAGGAATTCGA 57.972 40.909 13.08 4.52 43.98 3.71
343 345 4.218417 ACTTGTTTGATTCCCAGGAATTCG 59.782 41.667 13.08 1.19 43.98 3.34
344 346 5.728637 ACTTGTTTGATTCCCAGGAATTC 57.271 39.130 13.08 7.44 43.98 2.17
345 347 7.256296 CCTTAACTTGTTTGATTCCCAGGAATT 60.256 37.037 13.08 0.00 43.98 2.17
346 348 6.211384 CCTTAACTTGTTTGATTCCCAGGAAT 59.789 38.462 11.75 11.75 46.29 3.01
347 349 5.538433 CCTTAACTTGTTTGATTCCCAGGAA 59.462 40.000 0.68 0.68 38.59 3.36
348 350 5.076873 CCTTAACTTGTTTGATTCCCAGGA 58.923 41.667 0.00 0.00 0.00 3.86
350 352 6.405278 AACCTTAACTTGTTTGATTCCCAG 57.595 37.500 0.00 0.00 0.00 4.45
351 353 9.238368 CTATAACCTTAACTTGTTTGATTCCCA 57.762 33.333 0.00 0.00 0.00 4.37
352 354 9.457436 TCTATAACCTTAACTTGTTTGATTCCC 57.543 33.333 0.00 0.00 0.00 3.97
356 358 8.903820 GGCATCTATAACCTTAACTTGTTTGAT 58.096 33.333 0.00 0.00 0.00 2.57
357 359 7.885922 TGGCATCTATAACCTTAACTTGTTTGA 59.114 33.333 0.00 0.00 0.00 2.69
358 360 7.968405 GTGGCATCTATAACCTTAACTTGTTTG 59.032 37.037 0.00 0.00 0.00 2.93
359 361 7.148306 CGTGGCATCTATAACCTTAACTTGTTT 60.148 37.037 0.00 0.00 0.00 2.83
360 362 6.315393 CGTGGCATCTATAACCTTAACTTGTT 59.685 38.462 0.00 0.00 0.00 2.83
361 363 5.815740 CGTGGCATCTATAACCTTAACTTGT 59.184 40.000 0.00 0.00 0.00 3.16
362 364 5.815740 ACGTGGCATCTATAACCTTAACTTG 59.184 40.000 0.00 0.00 0.00 3.16
363 365 5.985911 ACGTGGCATCTATAACCTTAACTT 58.014 37.500 0.00 0.00 0.00 2.66
364 366 5.128171 TGACGTGGCATCTATAACCTTAACT 59.872 40.000 0.00 0.00 0.00 2.24
365 367 5.353938 TGACGTGGCATCTATAACCTTAAC 58.646 41.667 0.00 0.00 0.00 2.01
366 368 5.361571 TCTGACGTGGCATCTATAACCTTAA 59.638 40.000 0.00 0.00 0.00 1.85
367 369 4.891168 TCTGACGTGGCATCTATAACCTTA 59.109 41.667 0.00 0.00 0.00 2.69
368 370 3.704566 TCTGACGTGGCATCTATAACCTT 59.295 43.478 0.00 0.00 0.00 3.50
369 371 3.296854 TCTGACGTGGCATCTATAACCT 58.703 45.455 0.00 0.00 0.00 3.50
370 372 3.318275 TCTCTGACGTGGCATCTATAACC 59.682 47.826 0.00 0.00 0.00 2.85
371 373 4.276183 TCTCTCTGACGTGGCATCTATAAC 59.724 45.833 0.00 0.00 0.00 1.89
372 374 4.461198 TCTCTCTGACGTGGCATCTATAA 58.539 43.478 0.00 0.00 0.00 0.98
373 375 4.086706 TCTCTCTGACGTGGCATCTATA 57.913 45.455 0.00 0.00 0.00 1.31
374 376 2.937519 TCTCTCTGACGTGGCATCTAT 58.062 47.619 0.00 0.00 0.00 1.98
375 377 2.420058 TCTCTCTGACGTGGCATCTA 57.580 50.000 0.00 0.00 0.00 1.98
376 378 1.476085 CTTCTCTCTGACGTGGCATCT 59.524 52.381 0.00 0.00 0.00 2.90
377 379 1.919918 CTTCTCTCTGACGTGGCATC 58.080 55.000 0.00 0.00 0.00 3.91
378 380 0.108424 GCTTCTCTCTGACGTGGCAT 60.108 55.000 0.00 0.00 0.00 4.40
379 381 1.181741 AGCTTCTCTCTGACGTGGCA 61.182 55.000 0.00 0.00 0.00 4.92
380 382 0.457681 GAGCTTCTCTCTGACGTGGC 60.458 60.000 0.00 0.00 38.78 5.01
381 383 0.884514 TGAGCTTCTCTCTGACGTGG 59.115 55.000 0.00 0.00 42.38 4.94
382 384 2.937469 ATGAGCTTCTCTCTGACGTG 57.063 50.000 0.00 0.00 42.38 4.49
383 385 5.392767 TTTTATGAGCTTCTCTCTGACGT 57.607 39.130 0.00 0.00 42.38 4.34
422 440 6.384258 TCATTTTAGCTAGTGTTGTTGCAA 57.616 33.333 0.00 0.00 0.00 4.08
424 442 8.184192 ACATATCATTTTAGCTAGTGTTGTTGC 58.816 33.333 0.00 0.00 0.00 4.17
427 445 7.224753 CCGACATATCATTTTAGCTAGTGTTGT 59.775 37.037 0.00 2.23 0.00 3.32
434 452 7.269316 TCAACACCGACATATCATTTTAGCTA 58.731 34.615 0.00 0.00 0.00 3.32
435 453 6.112734 TCAACACCGACATATCATTTTAGCT 58.887 36.000 0.00 0.00 0.00 3.32
436 454 6.358118 TCAACACCGACATATCATTTTAGC 57.642 37.500 0.00 0.00 0.00 3.09
437 455 8.196802 TCTTCAACACCGACATATCATTTTAG 57.803 34.615 0.00 0.00 0.00 1.85
438 456 7.279981 CCTCTTCAACACCGACATATCATTTTA 59.720 37.037 0.00 0.00 0.00 1.52
440 458 5.586243 CCTCTTCAACACCGACATATCATTT 59.414 40.000 0.00 0.00 0.00 2.32
441 459 5.118990 CCTCTTCAACACCGACATATCATT 58.881 41.667 0.00 0.00 0.00 2.57
442 460 4.697514 CCTCTTCAACACCGACATATCAT 58.302 43.478 0.00 0.00 0.00 2.45
443 461 3.678806 GCCTCTTCAACACCGACATATCA 60.679 47.826 0.00 0.00 0.00 2.15
445 463 2.501723 AGCCTCTTCAACACCGACATAT 59.498 45.455 0.00 0.00 0.00 1.78
447 465 0.687354 AGCCTCTTCAACACCGACAT 59.313 50.000 0.00 0.00 0.00 3.06
448 466 0.033504 GAGCCTCTTCAACACCGACA 59.966 55.000 0.00 0.00 0.00 4.35
449 467 1.009389 CGAGCCTCTTCAACACCGAC 61.009 60.000 0.00 0.00 0.00 4.79
452 470 0.390472 CTCCGAGCCTCTTCAACACC 60.390 60.000 0.00 0.00 0.00 4.16
454 472 0.891373 CTCTCCGAGCCTCTTCAACA 59.109 55.000 0.00 0.00 0.00 3.33
455 473 3.731295 CTCTCCGAGCCTCTTCAAC 57.269 57.895 0.00 0.00 0.00 3.18
471 489 1.064946 CACATCGACCGAGGAGCTC 59.935 63.158 11.08 4.71 0.00 4.09
484 502 4.910456 GGATCTAACACGATACGACACATC 59.090 45.833 0.00 0.00 0.00 3.06
485 503 4.337274 TGGATCTAACACGATACGACACAT 59.663 41.667 0.00 0.00 0.00 3.21
487 505 4.201891 ACTGGATCTAACACGATACGACAC 60.202 45.833 0.00 0.00 0.00 3.67
488 506 3.943381 ACTGGATCTAACACGATACGACA 59.057 43.478 0.00 0.00 0.00 4.35
489 507 4.272991 AGACTGGATCTAACACGATACGAC 59.727 45.833 0.00 0.00 35.15 4.34
491 509 4.815040 AGACTGGATCTAACACGATACG 57.185 45.455 0.00 0.00 35.15 3.06
492 510 5.521544 GGAAGACTGGATCTAACACGATAC 58.478 45.833 0.00 0.00 36.27 2.24
493 511 4.275196 CGGAAGACTGGATCTAACACGATA 59.725 45.833 0.00 0.00 36.27 2.92
494 512 3.066900 CGGAAGACTGGATCTAACACGAT 59.933 47.826 0.00 0.00 36.27 3.73
495 513 2.422479 CGGAAGACTGGATCTAACACGA 59.578 50.000 0.00 0.00 36.27 4.35
496 514 2.479730 CCGGAAGACTGGATCTAACACG 60.480 54.545 0.00 0.00 44.87 4.49
498 516 2.108168 CCCGGAAGACTGGATCTAACA 58.892 52.381 0.73 0.00 44.87 2.41
499 517 1.202545 GCCCGGAAGACTGGATCTAAC 60.203 57.143 0.73 0.00 44.87 2.34
500 518 1.120530 GCCCGGAAGACTGGATCTAA 58.879 55.000 0.73 0.00 44.87 2.10
501 519 0.261991 AGCCCGGAAGACTGGATCTA 59.738 55.000 0.73 0.00 44.87 1.98
502 520 0.618968 AAGCCCGGAAGACTGGATCT 60.619 55.000 0.73 0.00 44.87 2.75
503 521 0.462759 CAAGCCCGGAAGACTGGATC 60.463 60.000 0.73 0.00 44.87 3.36
504 522 0.909610 TCAAGCCCGGAAGACTGGAT 60.910 55.000 0.73 0.00 44.87 3.41
506 524 0.745845 CATCAAGCCCGGAAGACTGG 60.746 60.000 0.73 0.00 41.93 4.00
507 525 0.036010 ACATCAAGCCCGGAAGACTG 60.036 55.000 0.73 0.00 0.00 3.51
509 527 0.250513 AGACATCAAGCCCGGAAGAC 59.749 55.000 0.73 0.00 0.00 3.01
510 528 1.860641 TAGACATCAAGCCCGGAAGA 58.139 50.000 0.73 0.00 0.00 2.87
511 529 2.760374 GATAGACATCAAGCCCGGAAG 58.240 52.381 0.73 0.00 0.00 3.46
512 530 1.068588 CGATAGACATCAAGCCCGGAA 59.931 52.381 0.73 0.00 39.76 4.30
513 531 0.673985 CGATAGACATCAAGCCCGGA 59.326 55.000 0.73 0.00 39.76 5.14
514 532 0.389391 ACGATAGACATCAAGCCCGG 59.611 55.000 0.00 0.00 41.38 5.73
515 533 1.491670 CACGATAGACATCAAGCCCG 58.508 55.000 0.00 0.00 41.38 6.13
516 534 1.871080 CCACGATAGACATCAAGCCC 58.129 55.000 0.00 0.00 41.38 5.19
517 535 1.202580 AGCCACGATAGACATCAAGCC 60.203 52.381 0.00 0.00 41.38 4.35
518 536 2.131183 GAGCCACGATAGACATCAAGC 58.869 52.381 0.00 0.00 41.38 4.01
519 537 2.223595 ACGAGCCACGATAGACATCAAG 60.224 50.000 7.86 0.00 45.77 3.02
520 538 1.749063 ACGAGCCACGATAGACATCAA 59.251 47.619 7.86 0.00 45.77 2.57
522 540 2.493713 AACGAGCCACGATAGACATC 57.506 50.000 7.86 0.00 45.77 3.06
523 541 3.703420 GTTAACGAGCCACGATAGACAT 58.297 45.455 7.86 0.00 45.77 3.06
524 542 2.476686 CGTTAACGAGCCACGATAGACA 60.477 50.000 23.35 0.00 45.77 3.41
525 543 2.107178 CGTTAACGAGCCACGATAGAC 58.893 52.381 23.35 2.31 45.77 2.59
527 545 2.107178 GACGTTAACGAGCCACGATAG 58.893 52.381 33.06 1.10 45.77 2.08
528 546 1.739466 AGACGTTAACGAGCCACGATA 59.261 47.619 33.06 0.00 45.77 2.92
529 547 0.524862 AGACGTTAACGAGCCACGAT 59.475 50.000 33.06 9.13 45.77 3.73
530 548 0.311790 AAGACGTTAACGAGCCACGA 59.688 50.000 33.06 0.00 45.77 4.35
532 550 1.719780 CAGAAGACGTTAACGAGCCAC 59.280 52.381 33.06 18.47 43.02 5.01
533 551 1.610038 TCAGAAGACGTTAACGAGCCA 59.390 47.619 33.06 8.11 43.02 4.75
534 552 1.984297 GTCAGAAGACGTTAACGAGCC 59.016 52.381 33.06 20.10 43.02 4.70
546 564 4.905456 TGAGAAAAACCCCTAGTCAGAAGA 59.095 41.667 0.00 0.00 0.00 2.87
547 565 5.221742 ACTGAGAAAAACCCCTAGTCAGAAG 60.222 44.000 7.88 0.00 35.12 2.85
548 566 4.658901 ACTGAGAAAAACCCCTAGTCAGAA 59.341 41.667 7.88 0.00 35.12 3.02
549 567 4.040461 CACTGAGAAAAACCCCTAGTCAGA 59.960 45.833 7.88 0.00 35.12 3.27
551 569 3.714798 ACACTGAGAAAAACCCCTAGTCA 59.285 43.478 0.00 0.00 0.00 3.41
552 570 4.202326 TGACACTGAGAAAAACCCCTAGTC 60.202 45.833 0.00 0.00 0.00 2.59
553 571 3.714798 TGACACTGAGAAAAACCCCTAGT 59.285 43.478 0.00 0.00 0.00 2.57
554 572 4.351874 TGACACTGAGAAAAACCCCTAG 57.648 45.455 0.00 0.00 0.00 3.02
555 573 4.410883 TCTTGACACTGAGAAAAACCCCTA 59.589 41.667 0.00 0.00 0.00 3.53
556 574 3.202151 TCTTGACACTGAGAAAAACCCCT 59.798 43.478 0.00 0.00 0.00 4.79
557 575 3.551846 TCTTGACACTGAGAAAAACCCC 58.448 45.455 0.00 0.00 0.00 4.95
558 576 4.580580 ACATCTTGACACTGAGAAAAACCC 59.419 41.667 0.00 0.00 0.00 4.11
560 578 5.506317 CCCACATCTTGACACTGAGAAAAAC 60.506 44.000 0.00 0.00 0.00 2.43
562 580 4.136796 CCCACATCTTGACACTGAGAAAA 58.863 43.478 0.00 0.00 0.00 2.29
563 581 3.743521 CCCACATCTTGACACTGAGAAA 58.256 45.455 0.00 0.00 0.00 2.52
564 582 2.550855 GCCCACATCTTGACACTGAGAA 60.551 50.000 0.00 0.00 0.00 2.87
565 583 1.002430 GCCCACATCTTGACACTGAGA 59.998 52.381 0.00 0.00 0.00 3.27
567 585 0.036732 GGCCCACATCTTGACACTGA 59.963 55.000 0.00 0.00 0.00 3.41
570 588 0.598065 GTTGGCCCACATCTTGACAC 59.402 55.000 0.00 0.00 0.00 3.67
571 589 0.478072 AGTTGGCCCACATCTTGACA 59.522 50.000 10.02 0.00 0.00 3.58
572 590 1.541588 GAAGTTGGCCCACATCTTGAC 59.458 52.381 10.02 0.00 38.80 3.18
574 592 1.542915 CAGAAGTTGGCCCACATCTTG 59.457 52.381 11.74 4.98 38.80 3.02
592 610 1.515020 CGGAGAAGGAGAGCACCAG 59.485 63.158 0.00 0.00 0.00 4.00
595 613 2.185608 GCCGGAGAAGGAGAGCAC 59.814 66.667 5.05 0.00 0.00 4.40
613 631 3.443045 CAAGCACCCATGGCCGTC 61.443 66.667 6.09 0.00 0.00 4.79
619 637 0.171903 GCAACTAGCAAGCACCCATG 59.828 55.000 0.00 0.00 44.79 3.66
631 649 1.006102 CCGCCCTATCCGCAACTAG 60.006 63.158 0.00 0.00 0.00 2.57
665 683 7.365741 ACAGAAAGCAAAGATGATACAAGTTG 58.634 34.615 0.00 0.00 0.00 3.16
666 684 7.516198 ACAGAAAGCAAAGATGATACAAGTT 57.484 32.000 0.00 0.00 0.00 2.66
698 716 4.203967 CGAACAAACGCAACGCAT 57.796 50.000 0.00 0.00 0.00 4.73
711 729 8.570096 TGTAATATAGTGACAATACAGCGAAC 57.430 34.615 0.00 0.00 0.00 3.95
731 749 8.726870 AGGCATACGTTACTTGTATTTGTAAT 57.273 30.769 0.00 0.00 32.32 1.89
783 801 4.566004 CGTCTTGGAGGTGACATTTAGAA 58.434 43.478 0.00 0.00 33.18 2.10
836 855 7.277396 CAAGGGGACGGTATCTTTAGATTTTA 58.723 38.462 0.00 0.00 36.05 1.52
844 863 0.988832 TGCAAGGGGACGGTATCTTT 59.011 50.000 0.00 0.00 0.00 2.52
896 915 2.021068 ATCTGGATCACCGCGACAGG 62.021 60.000 8.23 0.00 39.42 4.00
900 919 2.429250 TCTAAAATCTGGATCACCGCGA 59.571 45.455 8.23 0.00 39.42 5.87
901 920 2.821546 TCTAAAATCTGGATCACCGCG 58.178 47.619 0.00 0.00 39.42 6.46
902 921 5.059833 AGAATCTAAAATCTGGATCACCGC 58.940 41.667 0.00 0.00 39.42 5.68
903 922 6.074088 CGAAGAATCTAAAATCTGGATCACCG 60.074 42.308 0.00 0.00 39.42 4.94
904 923 6.203723 CCGAAGAATCTAAAATCTGGATCACC 59.796 42.308 0.00 0.00 0.00 4.02
905 924 6.763610 ACCGAAGAATCTAAAATCTGGATCAC 59.236 38.462 0.00 0.00 0.00 3.06
924 946 1.134491 GTGGGGGATAACTGACCGAAG 60.134 57.143 0.00 0.00 0.00 3.79
927 949 1.143183 CGTGGGGGATAACTGACCG 59.857 63.158 0.00 0.00 0.00 4.79
949 973 2.750888 GGACGCCGTGGATTTGAGC 61.751 63.158 0.00 0.00 0.00 4.26
1041 1071 0.744057 TACGTACCTCATCGTCCGCA 60.744 55.000 0.00 0.00 40.70 5.69
1080 1196 2.820197 TCCGATCGATACTGCAGCTAAT 59.180 45.455 18.66 4.94 0.00 1.73
1234 1360 1.677300 CCGGTATTGCCTTGGTGCA 60.677 57.895 0.00 0.00 40.07 4.57
1273 1410 4.522297 AGCTCAGAATTTAAACGCGATC 57.478 40.909 15.93 0.00 0.00 3.69
1281 1418 9.577110 CATAGCAATTGAAAGCTCAGAATTTAA 57.423 29.630 10.34 0.00 42.05 1.52
1441 1578 8.367911 TCTACCTTTGGAACTAGTGCATATATG 58.632 37.037 8.45 8.45 0.00 1.78
1476 1613 8.472007 AAATAATTCCAACGATTAATGGCCTA 57.528 30.769 3.32 0.00 36.62 3.93
1516 1653 6.796426 TCAGGTCGAACTTCAATATCAGTAG 58.204 40.000 0.00 0.00 0.00 2.57
1531 1668 3.953712 TGTTAGCTGATTCAGGTCGAA 57.046 42.857 20.90 9.04 41.50 3.71
1556 1693 0.528924 CCTGGCACACATCAACATGG 59.471 55.000 0.00 0.00 33.82 3.66
1779 1916 3.571571 TCACTTACGACGACAGAAATGG 58.428 45.455 0.00 0.00 0.00 3.16
1799 1936 3.413846 TGCTAATGCAGAGGATCCATC 57.586 47.619 15.82 8.74 45.31 3.51
1843 1984 7.558444 TGTTAATTTTGGGTTGTTAGTCAGAGT 59.442 33.333 0.00 0.00 0.00 3.24
1851 1992 5.464984 TCCCCTGTTAATTTTGGGTTGTTA 58.535 37.500 0.00 0.00 38.03 2.41
2095 2236 0.247736 AGCTGAAGTAGGACGCCTTG 59.752 55.000 3.71 0.00 34.61 3.61
2159 2300 1.073284 GTCCTCTACCCAAACCAGCAA 59.927 52.381 0.00 0.00 0.00 3.91
2173 2314 1.059913 CCCAGTTCACCTTGTCCTCT 58.940 55.000 0.00 0.00 0.00 3.69
2296 2437 1.234615 GCACTTGGAGCACGCCTTTA 61.235 55.000 0.00 0.00 0.00 1.85
2324 2465 2.611518 CAGGTTTACCTTGCGAGAGAG 58.388 52.381 1.22 0.00 46.09 3.20
2356 2497 0.365523 CGTACAATTCAGTGGCGTCG 59.634 55.000 0.00 0.00 0.00 5.12
2365 2506 3.104512 ACCATCCTCCTCGTACAATTCA 58.895 45.455 0.00 0.00 0.00 2.57
2369 2510 1.822990 GACACCATCCTCCTCGTACAA 59.177 52.381 0.00 0.00 0.00 2.41
2513 2654 3.818787 CAAGCACCTGATGGGCGC 61.819 66.667 0.00 0.00 39.10 6.53
2516 2657 0.251297 TTGTCCAAGCACCTGATGGG 60.251 55.000 0.00 0.00 41.89 4.00
2605 2746 2.608988 AGCTCCTCCACCTGGGTG 60.609 66.667 12.43 12.43 45.02 4.61
2813 2978 1.290955 CGACGGCCCTGTTGTAGAA 59.709 57.895 0.00 0.00 0.00 2.10
3025 3192 1.001641 GAACTGCATCTGCCCCACT 60.002 57.895 0.00 0.00 41.18 4.00
3197 3364 0.837691 TCTAGGCGCCCATCATCCAT 60.838 55.000 26.15 2.97 0.00 3.41
3210 3377 4.538917 GAGCACGAAGTAGTAATCTAGGC 58.461 47.826 0.00 0.00 41.61 3.93
3265 3432 3.068165 AGTTCTTAGCAAGGGCAACAAAC 59.932 43.478 0.00 0.00 44.61 2.93
3280 3447 6.630444 ACTCTCTTTGACGTGTAGTTCTTA 57.370 37.500 0.00 0.00 0.00 2.10
3295 3462 8.380742 TGGAATCCAACTATCTAACTCTCTTT 57.619 34.615 0.00 0.00 0.00 2.52
3340 3510 9.935241 CATAATTCACTGGCTCTACATAAGTAT 57.065 33.333 0.00 0.00 0.00 2.12
3413 3583 0.471211 TCTTCACCCTCCCGAGTTGT 60.471 55.000 0.00 0.00 0.00 3.32
3419 3589 2.660064 CCACCTCTTCACCCTCCCG 61.660 68.421 0.00 0.00 0.00 5.14
3437 3607 6.418946 ACCTGGTCTCATAGAATTCTTTTCC 58.581 40.000 14.36 8.65 0.00 3.13
3438 3608 7.334858 AGACCTGGTCTCATAGAATTCTTTTC 58.665 38.462 23.49 0.00 38.71 2.29
3440 3610 6.882768 AGACCTGGTCTCATAGAATTCTTT 57.117 37.500 23.49 2.41 38.71 2.52
3453 3623 0.113776 TAACCCGTGAGACCTGGTCT 59.886 55.000 28.70 28.70 46.42 3.85
3454 3624 0.531200 CTAACCCGTGAGACCTGGTC 59.469 60.000 19.20 19.20 0.00 4.02
3455 3625 1.542187 GCTAACCCGTGAGACCTGGT 61.542 60.000 0.00 0.00 0.00 4.00
3456 3626 1.218316 GCTAACCCGTGAGACCTGG 59.782 63.158 0.00 0.00 0.00 4.45
3457 3627 0.108615 CTGCTAACCCGTGAGACCTG 60.109 60.000 0.00 0.00 0.00 4.00
3458 3628 1.258445 CCTGCTAACCCGTGAGACCT 61.258 60.000 0.00 0.00 0.00 3.85
3459 3629 1.218316 CCTGCTAACCCGTGAGACC 59.782 63.158 0.00 0.00 0.00 3.85
3460 3630 0.389948 CACCTGCTAACCCGTGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
3461 3631 0.541063 TCACCTGCTAACCCGTGAGA 60.541 55.000 0.00 0.00 31.80 3.27
3462 3632 0.108615 CTCACCTGCTAACCCGTGAG 60.109 60.000 2.01 2.01 44.38 3.51
3463 3633 0.541063 TCTCACCTGCTAACCCGTGA 60.541 55.000 0.00 0.00 34.26 4.35
3464 3634 0.389948 GTCTCACCTGCTAACCCGTG 60.390 60.000 0.00 0.00 0.00 4.94
3465 3635 1.542187 GGTCTCACCTGCTAACCCGT 61.542 60.000 0.00 0.00 34.73 5.28
3466 3636 1.218316 GGTCTCACCTGCTAACCCG 59.782 63.158 0.00 0.00 34.73 5.28
3467 3637 1.602771 GGGTCTCACCTGCTAACCC 59.397 63.158 0.00 0.00 42.62 4.11
3468 3638 0.690762 TTGGGTCTCACCTGCTAACC 59.309 55.000 0.00 0.00 38.64 2.85
3469 3639 1.610886 GGTTGGGTCTCACCTGCTAAC 60.611 57.143 0.00 0.00 38.64 2.34
3470 3640 0.690762 GGTTGGGTCTCACCTGCTAA 59.309 55.000 0.00 0.00 38.64 3.09
3471 3641 0.178903 AGGTTGGGTCTCACCTGCTA 60.179 55.000 0.00 0.00 38.64 3.49
3472 3642 1.462238 AGGTTGGGTCTCACCTGCT 60.462 57.895 0.00 0.00 38.64 4.24
3473 3643 1.302832 CAGGTTGGGTCTCACCTGC 60.303 63.158 5.43 0.00 42.50 4.85
3475 3645 0.987294 CATCAGGTTGGGTCTCACCT 59.013 55.000 0.00 0.00 38.64 4.00
3476 3646 0.035056 CCATCAGGTTGGGTCTCACC 60.035 60.000 0.00 0.00 37.60 4.02
3477 3647 0.984230 TCCATCAGGTTGGGTCTCAC 59.016 55.000 0.00 0.00 37.37 3.51
3478 3648 1.561076 CATCCATCAGGTTGGGTCTCA 59.439 52.381 0.00 0.00 37.37 3.27
3479 3649 1.839994 TCATCCATCAGGTTGGGTCTC 59.160 52.381 0.00 0.00 37.37 3.36
3480 3650 1.561542 GTCATCCATCAGGTTGGGTCT 59.438 52.381 0.00 0.00 37.37 3.85
3481 3651 1.281867 TGTCATCCATCAGGTTGGGTC 59.718 52.381 0.00 0.00 37.37 4.46
3482 3652 1.004745 GTGTCATCCATCAGGTTGGGT 59.995 52.381 0.00 0.00 37.37 4.51
3483 3653 1.004628 TGTGTCATCCATCAGGTTGGG 59.995 52.381 0.00 0.00 37.37 4.12
3484 3654 2.495155 TGTGTCATCCATCAGGTTGG 57.505 50.000 0.00 0.00 35.67 3.77
3485 3655 2.686405 CCATGTGTCATCCATCAGGTTG 59.314 50.000 0.00 0.00 36.19 3.77
3486 3656 2.947243 GCCATGTGTCATCCATCAGGTT 60.947 50.000 0.00 0.00 35.89 3.50
3487 3657 1.409241 GCCATGTGTCATCCATCAGGT 60.409 52.381 0.00 0.00 35.89 4.00
3488 3658 1.315690 GCCATGTGTCATCCATCAGG 58.684 55.000 0.00 0.00 0.00 3.86
3489 3659 2.047002 TGCCATGTGTCATCCATCAG 57.953 50.000 0.00 0.00 0.00 2.90
3490 3660 2.740506 ATGCCATGTGTCATCCATCA 57.259 45.000 0.00 0.00 0.00 3.07
3491 3661 2.953648 TGAATGCCATGTGTCATCCATC 59.046 45.455 0.00 0.00 0.00 3.51
3492 3662 2.691526 GTGAATGCCATGTGTCATCCAT 59.308 45.455 0.00 0.00 0.00 3.41
3493 3663 2.093890 GTGAATGCCATGTGTCATCCA 58.906 47.619 0.00 0.00 0.00 3.41
3494 3664 2.093890 TGTGAATGCCATGTGTCATCC 58.906 47.619 0.00 0.00 0.00 3.51
3495 3665 3.853831 TTGTGAATGCCATGTGTCATC 57.146 42.857 0.00 0.00 0.00 2.92
3496 3666 4.221041 TGATTTGTGAATGCCATGTGTCAT 59.779 37.500 0.00 0.00 0.00 3.06
3497 3667 3.573110 TGATTTGTGAATGCCATGTGTCA 59.427 39.130 0.00 0.00 0.00 3.58
3498 3668 3.922240 GTGATTTGTGAATGCCATGTGTC 59.078 43.478 0.00 0.00 0.00 3.67
3499 3669 3.321396 TGTGATTTGTGAATGCCATGTGT 59.679 39.130 0.00 0.00 0.00 3.72
3500 3670 3.915536 TGTGATTTGTGAATGCCATGTG 58.084 40.909 0.00 0.00 0.00 3.21
3501 3671 4.603989 TTGTGATTTGTGAATGCCATGT 57.396 36.364 0.00 0.00 0.00 3.21
3502 3672 5.236695 TGTTTTGTGATTTGTGAATGCCATG 59.763 36.000 0.00 0.00 0.00 3.66
3503 3673 5.366460 TGTTTTGTGATTTGTGAATGCCAT 58.634 33.333 0.00 0.00 0.00 4.40
3504 3674 4.763073 TGTTTTGTGATTTGTGAATGCCA 58.237 34.783 0.00 0.00 0.00 4.92
3505 3675 5.697633 AGATGTTTTGTGATTTGTGAATGCC 59.302 36.000 0.00 0.00 0.00 4.40
3506 3676 6.774354 AGATGTTTTGTGATTTGTGAATGC 57.226 33.333 0.00 0.00 0.00 3.56
3507 3677 8.800231 TGTAGATGTTTTGTGATTTGTGAATG 57.200 30.769 0.00 0.00 0.00 2.67
3508 3678 7.596248 GCTGTAGATGTTTTGTGATTTGTGAAT 59.404 33.333 0.00 0.00 0.00 2.57
3509 3679 6.917477 GCTGTAGATGTTTTGTGATTTGTGAA 59.083 34.615 0.00 0.00 0.00 3.18
3510 3680 6.039159 TGCTGTAGATGTTTTGTGATTTGTGA 59.961 34.615 0.00 0.00 0.00 3.58
3511 3681 6.207928 TGCTGTAGATGTTTTGTGATTTGTG 58.792 36.000 0.00 0.00 0.00 3.33
3512 3682 6.389830 TGCTGTAGATGTTTTGTGATTTGT 57.610 33.333 0.00 0.00 0.00 2.83
3513 3683 7.383029 ACATTGCTGTAGATGTTTTGTGATTTG 59.617 33.333 0.00 0.00 32.85 2.32
3514 3684 7.383029 CACATTGCTGTAGATGTTTTGTGATTT 59.617 33.333 0.00 0.00 34.42 2.17
3515 3685 6.864685 CACATTGCTGTAGATGTTTTGTGATT 59.135 34.615 0.00 0.00 34.42 2.57
3516 3686 6.384224 CACATTGCTGTAGATGTTTTGTGAT 58.616 36.000 0.00 0.00 34.42 3.06
3517 3687 5.278414 CCACATTGCTGTAGATGTTTTGTGA 60.278 40.000 0.00 0.00 34.42 3.58
3518 3688 4.919168 CCACATTGCTGTAGATGTTTTGTG 59.081 41.667 0.00 0.00 34.42 3.33
3519 3689 4.826733 TCCACATTGCTGTAGATGTTTTGT 59.173 37.500 0.00 0.00 34.42 2.83
3520 3690 5.375417 TCCACATTGCTGTAGATGTTTTG 57.625 39.130 0.00 0.00 34.42 2.44
3521 3691 5.711506 TCATCCACATTGCTGTAGATGTTTT 59.288 36.000 12.10 0.00 45.84 2.43
3522 3692 5.255687 TCATCCACATTGCTGTAGATGTTT 58.744 37.500 12.10 0.00 45.84 2.83
3523 3693 4.847198 TCATCCACATTGCTGTAGATGTT 58.153 39.130 12.10 0.00 45.84 2.71
3524 3694 4.162888 TCTCATCCACATTGCTGTAGATGT 59.837 41.667 12.10 1.07 45.84 3.06
3525 3695 4.700700 TCTCATCCACATTGCTGTAGATG 58.299 43.478 7.80 7.80 46.56 2.90
3526 3696 5.363562 TTCTCATCCACATTGCTGTAGAT 57.636 39.130 0.00 0.00 34.57 1.98
3527 3697 4.824479 TTCTCATCCACATTGCTGTAGA 57.176 40.909 0.00 0.00 33.14 2.59
3528 3698 6.446781 AAATTCTCATCCACATTGCTGTAG 57.553 37.500 0.00 0.00 33.14 2.74
3529 3699 7.067372 CCTTAAATTCTCATCCACATTGCTGTA 59.933 37.037 0.00 0.00 33.14 2.74
3562 3732 1.725641 TGCTTGTCTACCAATCTGCG 58.274 50.000 0.00 0.00 31.20 5.18
3662 3832 7.687941 ACCATAAACAGTAAAGATGAGTTGG 57.312 36.000 0.00 0.00 0.00 3.77
3995 4165 6.652205 TTTAGTTCCCCCAATAGAGACAAT 57.348 37.500 0.00 0.00 0.00 2.71
4024 4194 9.200817 CCCTATCATTTCTTTATTCTTTTCCCA 57.799 33.333 0.00 0.00 0.00 4.37
4184 4354 5.428184 TTTTCCCTCCACACAAATTTTGT 57.572 34.783 8.97 8.97 46.75 2.83
4187 4357 7.801104 ACTAATTTTTCCCTCCACACAAATTT 58.199 30.769 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.