Multiple sequence alignment - TraesCS2D01G442100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G442100 chr2D 100.000 6268 0 0 1 6268 552205364 552199097 0.000000e+00 11575.0
1 TraesCS2D01G442100 chr2D 81.373 408 61 11 5 404 288611167 288610767 1.010000e-82 318.0
2 TraesCS2D01G442100 chr2D 92.000 75 5 1 2779 2852 564093453 564093379 3.090000e-18 104.0
3 TraesCS2D01G442100 chr2D 89.333 75 7 1 2779 2852 121776620 121776546 6.690000e-15 93.5
4 TraesCS2D01G442100 chr2D 97.059 34 1 0 698 731 8477449 8477482 2.440000e-04 58.4
5 TraesCS2D01G442100 chr2B 96.745 3410 84 10 2864 6268 657852912 657849525 0.000000e+00 5657.0
6 TraesCS2D01G442100 chr2B 91.204 2035 121 22 805 2790 657854994 657852969 0.000000e+00 2713.0
7 TraesCS2D01G442100 chr2B 82.310 407 50 12 5 390 794889149 794889554 3.620000e-87 333.0
8 TraesCS2D01G442100 chr2B 91.011 178 12 1 452 625 657855494 657855317 2.920000e-58 237.0
9 TraesCS2D01G442100 chr2B 88.043 92 8 1 5490 5578 448905752 448905843 8.590000e-19 106.0
10 TraesCS2D01G442100 chr2B 91.429 70 6 0 2780 2849 323098669 323098600 5.170000e-16 97.1
11 TraesCS2D01G442100 chr2A 87.262 2104 198 32 745 2790 692938375 692936284 0.000000e+00 2337.0
12 TraesCS2D01G442100 chr2A 91.791 1474 91 8 4003 5472 692935023 692933576 0.000000e+00 2025.0
13 TraesCS2D01G442100 chr2A 85.874 446 49 6 2905 3339 692935868 692935426 4.430000e-126 462.0
14 TraesCS2D01G442100 chr2A 80.659 455 57 10 2364 2790 764777000 764776549 2.180000e-84 324.0
15 TraesCS2D01G442100 chr2A 90.860 186 9 4 445 626 692938605 692938424 6.280000e-60 243.0
16 TraesCS2D01G442100 chr2A 85.149 202 28 2 1756 1956 764777272 764777072 8.240000e-49 206.0
17 TraesCS2D01G442100 chr2A 87.736 106 11 2 6162 6266 692931432 692931328 8.530000e-24 122.0
18 TraesCS2D01G442100 chr2A 94.203 69 4 0 2784 2852 285632995 285632927 8.590000e-19 106.0
19 TraesCS2D01G442100 chr2A 97.143 35 1 0 701 735 4987214 4987248 6.790000e-05 60.2
20 TraesCS2D01G442100 chr2A 100.000 32 0 0 700 731 401198269 401198300 6.790000e-05 60.2
21 TraesCS2D01G442100 chr2A 100.000 31 0 0 701 731 675898272 675898302 2.440000e-04 58.4
22 TraesCS2D01G442100 chr6B 86.534 401 42 7 1 393 582871509 582871905 1.250000e-116 431.0
23 TraesCS2D01G442100 chr6B 89.333 75 7 1 2779 2852 72176101 72176175 6.690000e-15 93.5
24 TraesCS2D01G442100 chr5A 80.344 407 60 15 5 405 640176513 640176905 2.210000e-74 291.0
25 TraesCS2D01G442100 chr5A 85.199 277 23 7 2 260 429479410 429479134 1.040000e-67 268.0
26 TraesCS2D01G442100 chr1B 78.240 409 57 18 1 405 545648133 545648513 3.780000e-57 233.0
27 TraesCS2D01G442100 chr4B 83.756 197 22 5 5 200 10402675 10402488 1.800000e-40 178.0
28 TraesCS2D01G442100 chr4B 94.203 69 4 0 2784 2852 806711 806779 8.590000e-19 106.0
29 TraesCS2D01G442100 chr4B 89.024 82 7 2 5532 5612 129528780 129528700 4.000000e-17 100.0
30 TraesCS2D01G442100 chr4B 87.879 66 6 2 5532 5596 129538860 129538796 6.740000e-10 76.8
31 TraesCS2D01G442100 chr5D 90.833 120 11 0 4 123 539039044 539038925 1.810000e-35 161.0
32 TraesCS2D01G442100 chr5D 87.681 138 14 1 5490 5624 13715188 13715051 2.340000e-34 158.0
33 TraesCS2D01G442100 chr7B 87.050 139 14 2 5490 5624 382607562 382607700 3.030000e-33 154.0
34 TraesCS2D01G442100 chr3A 82.609 138 21 3 5490 5624 116533100 116532963 1.100000e-22 119.0
35 TraesCS2D01G442100 chr3A 100.000 31 0 0 701 731 165051747 165051777 2.440000e-04 58.4
36 TraesCS2D01G442100 chr1A 91.026 78 6 1 2779 2855 464858694 464858617 3.090000e-18 104.0
37 TraesCS2D01G442100 chr1A 89.024 82 9 0 5532 5613 204832859 204832940 1.110000e-17 102.0
38 TraesCS2D01G442100 chr5B 92.647 68 5 0 2785 2852 134917785 134917852 1.440000e-16 99.0
39 TraesCS2D01G442100 chr5B 100.000 31 0 0 701 731 285934839 285934869 2.440000e-04 58.4
40 TraesCS2D01G442100 chr3D 89.333 75 6 2 2779 2852 570105957 570105884 6.690000e-15 93.5
41 TraesCS2D01G442100 chr6A 88.000 75 9 0 5518 5592 169208028 169207954 8.650000e-14 89.8
42 TraesCS2D01G442100 chr7D 97.059 34 1 0 701 734 517572252 517572219 2.440000e-04 58.4
43 TraesCS2D01G442100 chr6D 100.000 31 0 0 701 731 242634255 242634285 2.440000e-04 58.4
44 TraesCS2D01G442100 chr6D 100.000 31 0 0 701 731 423213851 423213881 2.440000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G442100 chr2D 552199097 552205364 6267 True 11575.0 11575 100.000000 1 6268 1 chr2D.!!$R3 6267
1 TraesCS2D01G442100 chr2B 657849525 657855494 5969 True 2869.0 5657 92.986667 452 6268 3 chr2B.!!$R2 5816
2 TraesCS2D01G442100 chr2A 692931328 692938605 7277 True 1037.8 2337 88.704600 445 6266 5 chr2A.!!$R2 5821
3 TraesCS2D01G442100 chr2A 764776549 764777272 723 True 265.0 324 82.904000 1756 2790 2 chr2A.!!$R3 1034

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
398 399 0.036952 CTGCTGATATACGGGGCCTG 60.037 60.000 11.83 11.83 0.00 4.85 F
707 713 0.245813 ACTCCCTCCGTTAAACGCTC 59.754 55.000 0.00 0.00 40.91 5.03 F
1836 2109 0.163788 CGCGAAGGTACTGCAACAAG 59.836 55.000 0.00 0.00 40.86 3.16 F
2281 2587 1.134670 ACTATTGAAGGCCGAGACAGC 60.135 52.381 0.00 0.00 0.00 4.40 F
2538 2847 1.507141 GACTTCTGCCACAACACCCG 61.507 60.000 0.00 0.00 0.00 5.28 F
2683 3018 1.872313 CAAAACGCATGTTGCCCAAAT 59.128 42.857 0.00 0.00 41.12 2.32 F
4986 5671 0.324285 AGAAGCAGGTGAAGAGCAGG 59.676 55.000 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1710 1977 0.319900 TGTCTTTCAGCGGTCTCTGC 60.320 55.000 0.00 0.00 34.19 4.26 R
2607 2916 0.901124 AGATGGACTGAGTGCCTCAC 59.099 55.000 11.43 0.00 35.39 3.51 R
3702 4387 0.178967 TTTTGGAGCTCATGTGCCCA 60.179 50.000 17.19 19.58 33.62 5.36 R
3997 4682 2.036604 TCTTCGTTCTGCATGTACCACA 59.963 45.455 0.00 0.00 0.00 4.17 R
4986 5671 1.061570 GCTGCGCAACTGCATAGAC 59.938 57.895 13.05 0.00 45.26 2.59 R
5033 5718 1.737838 TCATGATGGGTCGTTCTTGC 58.262 50.000 0.00 0.00 0.00 4.01 R
6157 8479 0.317479 GGGTGAGTCGCTTGTACTGT 59.683 55.000 3.25 0.00 0.00 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.718731 CTCCTCTACGAGCAGGCG 59.281 66.667 0.00 0.00 37.29 5.52
22 23 3.477224 CTCCTCTACGAGCAGGCGC 62.477 68.421 0.00 0.00 38.99 6.53
43 44 4.368808 CCACCGTGCGCGAGTTTG 62.369 66.667 23.45 11.94 41.33 2.93
44 45 3.334751 CACCGTGCGCGAGTTTGA 61.335 61.111 23.45 0.00 41.33 2.69
45 46 3.335534 ACCGTGCGCGAGTTTGAC 61.336 61.111 23.45 0.00 41.33 3.18
46 47 4.409588 CCGTGCGCGAGTTTGACG 62.410 66.667 23.45 4.89 41.33 4.35
53 54 3.329231 CGAGTTTGACGCCAAGCA 58.671 55.556 0.67 0.00 36.17 3.91
54 55 1.205064 CGAGTTTGACGCCAAGCAG 59.795 57.895 0.67 0.00 36.17 4.24
55 56 1.576421 GAGTTTGACGCCAAGCAGG 59.424 57.895 0.67 0.00 36.17 4.85
86 87 2.573869 CGAAGCCGAGGAGCAAGA 59.426 61.111 0.00 0.00 38.22 3.02
87 88 1.807573 CGAAGCCGAGGAGCAAGAC 60.808 63.158 0.00 0.00 38.22 3.01
88 89 1.293498 GAAGCCGAGGAGCAAGACA 59.707 57.895 0.00 0.00 34.23 3.41
89 90 0.320771 GAAGCCGAGGAGCAAGACAA 60.321 55.000 0.00 0.00 34.23 3.18
90 91 0.321122 AAGCCGAGGAGCAAGACAAG 60.321 55.000 0.00 0.00 34.23 3.16
91 92 1.188219 AGCCGAGGAGCAAGACAAGA 61.188 55.000 0.00 0.00 34.23 3.02
92 93 0.107945 GCCGAGGAGCAAGACAAGAT 60.108 55.000 0.00 0.00 0.00 2.40
93 94 1.649664 CCGAGGAGCAAGACAAGATG 58.350 55.000 0.00 0.00 0.00 2.90
94 95 1.066573 CCGAGGAGCAAGACAAGATGT 60.067 52.381 0.00 0.00 0.00 3.06
95 96 2.166459 CCGAGGAGCAAGACAAGATGTA 59.834 50.000 0.00 0.00 0.00 2.29
96 97 3.182967 CGAGGAGCAAGACAAGATGTAC 58.817 50.000 0.00 0.00 0.00 2.90
97 98 3.367395 CGAGGAGCAAGACAAGATGTACA 60.367 47.826 0.00 0.00 0.00 2.90
98 99 4.679106 CGAGGAGCAAGACAAGATGTACAT 60.679 45.833 8.43 8.43 0.00 2.29
99 100 4.764172 AGGAGCAAGACAAGATGTACATC 58.236 43.478 25.47 25.47 38.09 3.06
100 101 3.553511 GGAGCAAGACAAGATGTACATCG 59.446 47.826 26.13 17.19 42.48 3.84
101 102 4.424626 GAGCAAGACAAGATGTACATCGA 58.575 43.478 26.13 0.00 42.48 3.59
102 103 5.016051 AGCAAGACAAGATGTACATCGAT 57.984 39.130 26.13 18.02 42.48 3.59
103 104 5.046529 AGCAAGACAAGATGTACATCGATC 58.953 41.667 26.13 22.95 42.48 3.69
104 105 5.046529 GCAAGACAAGATGTACATCGATCT 58.953 41.667 26.13 24.41 42.48 2.75
105 106 5.521735 GCAAGACAAGATGTACATCGATCTT 59.478 40.000 28.33 28.33 42.48 2.40
110 111 6.746104 CAAGATGTACATCGATCTTGTCTC 57.254 41.667 26.13 3.63 45.60 3.36
111 112 5.446143 AGATGTACATCGATCTTGTCTCC 57.554 43.478 26.13 2.63 42.48 3.71
112 113 4.889995 AGATGTACATCGATCTTGTCTCCA 59.110 41.667 26.13 0.00 42.48 3.86
113 114 5.360999 AGATGTACATCGATCTTGTCTCCAA 59.639 40.000 26.13 0.00 42.48 3.53
114 115 5.598416 TGTACATCGATCTTGTCTCCAAT 57.402 39.130 0.00 0.00 0.00 3.16
115 116 5.351458 TGTACATCGATCTTGTCTCCAATG 58.649 41.667 0.00 0.00 0.00 2.82
116 117 4.743057 ACATCGATCTTGTCTCCAATGA 57.257 40.909 0.00 0.00 0.00 2.57
117 118 4.437239 ACATCGATCTTGTCTCCAATGAC 58.563 43.478 0.00 0.00 37.47 3.06
118 119 3.150848 TCGATCTTGTCTCCAATGACG 57.849 47.619 0.00 0.00 39.64 4.35
119 120 2.752903 TCGATCTTGTCTCCAATGACGA 59.247 45.455 0.00 0.00 39.64 4.20
120 121 3.381590 TCGATCTTGTCTCCAATGACGAT 59.618 43.478 0.00 0.00 39.64 3.73
121 122 3.488678 CGATCTTGTCTCCAATGACGATG 59.511 47.826 0.00 0.00 39.64 3.84
122 123 4.686972 GATCTTGTCTCCAATGACGATGA 58.313 43.478 0.00 0.00 39.64 2.92
123 124 4.115401 TCTTGTCTCCAATGACGATGAG 57.885 45.455 0.00 0.00 39.64 2.90
124 125 3.511540 TCTTGTCTCCAATGACGATGAGT 59.488 43.478 0.00 0.00 39.64 3.41
125 126 3.236632 TGTCTCCAATGACGATGAGTG 57.763 47.619 0.00 0.00 39.64 3.51
126 127 2.825532 TGTCTCCAATGACGATGAGTGA 59.174 45.455 0.00 0.00 39.64 3.41
127 128 3.119352 TGTCTCCAATGACGATGAGTGAG 60.119 47.826 0.00 0.00 39.64 3.51
128 129 3.092301 TCTCCAATGACGATGAGTGAGT 58.908 45.455 0.00 0.00 0.00 3.41
129 130 3.119352 TCTCCAATGACGATGAGTGAGTG 60.119 47.826 0.00 0.00 32.00 3.51
130 131 1.662629 CCAATGACGATGAGTGAGTGC 59.337 52.381 0.00 0.00 30.87 4.40
131 132 1.662629 CAATGACGATGAGTGAGTGCC 59.337 52.381 0.00 0.00 0.00 5.01
132 133 0.179127 ATGACGATGAGTGAGTGCCG 60.179 55.000 0.00 0.00 0.00 5.69
133 134 2.125912 ACGATGAGTGAGTGCCGC 60.126 61.111 0.00 0.00 0.00 6.53
134 135 2.887568 CGATGAGTGAGTGCCGCC 60.888 66.667 0.00 0.00 0.00 6.13
135 136 2.887568 GATGAGTGAGTGCCGCCG 60.888 66.667 0.00 0.00 0.00 6.46
156 157 2.747855 CCGCCACCCAAAGAGCTC 60.748 66.667 5.27 5.27 0.00 4.09
157 158 2.747855 CGCCACCCAAAGAGCTCC 60.748 66.667 10.93 0.00 0.00 4.70
158 159 2.436109 GCCACCCAAAGAGCTCCA 59.564 61.111 10.93 0.00 0.00 3.86
159 160 1.676967 GCCACCCAAAGAGCTCCAG 60.677 63.158 10.93 0.00 0.00 3.86
160 161 1.763770 CCACCCAAAGAGCTCCAGT 59.236 57.895 10.93 0.00 0.00 4.00
161 162 0.607489 CCACCCAAAGAGCTCCAGTG 60.607 60.000 10.93 10.70 0.00 3.66
162 163 0.397941 CACCCAAAGAGCTCCAGTGA 59.602 55.000 10.93 0.00 0.00 3.41
163 164 0.689623 ACCCAAAGAGCTCCAGTGAG 59.310 55.000 10.93 0.00 41.84 3.51
172 173 3.614399 CTCCAGTGAGCTCCGTTTT 57.386 52.632 12.15 0.00 0.00 2.43
173 174 1.884235 CTCCAGTGAGCTCCGTTTTT 58.116 50.000 12.15 0.00 0.00 1.94
174 175 1.532868 CTCCAGTGAGCTCCGTTTTTG 59.467 52.381 12.15 0.60 0.00 2.44
175 176 0.593128 CCAGTGAGCTCCGTTTTTGG 59.407 55.000 12.15 6.11 0.00 3.28
176 177 0.040067 CAGTGAGCTCCGTTTTTGGC 60.040 55.000 12.15 0.00 0.00 4.52
177 178 0.179018 AGTGAGCTCCGTTTTTGGCT 60.179 50.000 12.15 0.00 37.77 4.75
178 179 1.071699 AGTGAGCTCCGTTTTTGGCTA 59.928 47.619 12.15 0.00 35.01 3.93
179 180 1.464997 GTGAGCTCCGTTTTTGGCTAG 59.535 52.381 12.15 0.00 35.01 3.42
180 181 1.071699 TGAGCTCCGTTTTTGGCTAGT 59.928 47.619 12.15 0.00 35.01 2.57
181 182 2.152016 GAGCTCCGTTTTTGGCTAGTT 58.848 47.619 0.87 0.00 35.01 2.24
182 183 2.552743 GAGCTCCGTTTTTGGCTAGTTT 59.447 45.455 0.87 0.00 35.01 2.66
183 184 3.746940 AGCTCCGTTTTTGGCTAGTTTA 58.253 40.909 0.00 0.00 32.94 2.01
184 185 3.751698 AGCTCCGTTTTTGGCTAGTTTAG 59.248 43.478 0.00 0.00 32.94 1.85
185 186 3.119955 GCTCCGTTTTTGGCTAGTTTAGG 60.120 47.826 0.00 0.00 0.00 2.69
186 187 3.414269 TCCGTTTTTGGCTAGTTTAGGG 58.586 45.455 0.00 0.00 0.00 3.53
187 188 3.151554 CCGTTTTTGGCTAGTTTAGGGT 58.848 45.455 0.00 0.00 0.00 4.34
188 189 4.041444 TCCGTTTTTGGCTAGTTTAGGGTA 59.959 41.667 0.00 0.00 0.00 3.69
189 190 4.393990 CCGTTTTTGGCTAGTTTAGGGTAG 59.606 45.833 0.00 0.00 0.00 3.18
190 191 4.393990 CGTTTTTGGCTAGTTTAGGGTAGG 59.606 45.833 0.00 0.00 0.00 3.18
191 192 4.579647 TTTTGGCTAGTTTAGGGTAGGG 57.420 45.455 0.00 0.00 0.00 3.53
192 193 1.503800 TGGCTAGTTTAGGGTAGGGC 58.496 55.000 0.00 0.00 0.00 5.19
193 194 0.391966 GGCTAGTTTAGGGTAGGGCG 59.608 60.000 0.00 0.00 0.00 6.13
194 195 0.391966 GCTAGTTTAGGGTAGGGCGG 59.608 60.000 0.00 0.00 0.00 6.13
195 196 0.391966 CTAGTTTAGGGTAGGGCGGC 59.608 60.000 0.00 0.00 0.00 6.53
196 197 0.325484 TAGTTTAGGGTAGGGCGGCA 60.325 55.000 12.47 0.00 0.00 5.69
197 198 0.986550 AGTTTAGGGTAGGGCGGCAT 60.987 55.000 12.47 6.26 0.00 4.40
198 199 0.534427 GTTTAGGGTAGGGCGGCATC 60.534 60.000 12.47 0.00 0.00 3.91
199 200 2.035237 TTTAGGGTAGGGCGGCATCG 62.035 60.000 12.47 0.00 39.81 3.84
214 215 5.034554 CGGCATCGCAATGTAAAATATCT 57.965 39.130 0.00 0.00 35.18 1.98
215 216 5.451908 CGGCATCGCAATGTAAAATATCTT 58.548 37.500 0.00 0.00 35.18 2.40
216 217 5.565259 CGGCATCGCAATGTAAAATATCTTC 59.435 40.000 0.00 0.00 35.18 2.87
217 218 5.565259 GGCATCGCAATGTAAAATATCTTCG 59.435 40.000 0.00 0.00 35.18 3.79
218 219 6.362686 GCATCGCAATGTAAAATATCTTCGA 58.637 36.000 0.00 0.00 35.18 3.71
219 220 6.850823 GCATCGCAATGTAAAATATCTTCGAA 59.149 34.615 0.00 0.00 35.18 3.71
220 221 7.375808 GCATCGCAATGTAAAATATCTTCGAAA 59.624 33.333 0.00 0.00 35.18 3.46
221 222 9.385902 CATCGCAATGTAAAATATCTTCGAAAT 57.614 29.630 0.00 0.00 0.00 2.17
222 223 8.766493 TCGCAATGTAAAATATCTTCGAAATG 57.234 30.769 0.00 0.00 0.00 2.32
223 224 7.375808 TCGCAATGTAAAATATCTTCGAAATGC 59.624 33.333 0.00 0.00 0.00 3.56
224 225 7.165647 CGCAATGTAAAATATCTTCGAAATGCA 59.834 33.333 0.00 0.00 0.00 3.96
225 226 8.474577 GCAATGTAAAATATCTTCGAAATGCAG 58.525 33.333 0.00 0.00 0.00 4.41
226 227 8.474577 CAATGTAAAATATCTTCGAAATGCAGC 58.525 33.333 0.00 0.00 0.00 5.25
227 228 6.191661 TGTAAAATATCTTCGAAATGCAGCG 58.808 36.000 0.00 0.00 0.00 5.18
228 229 5.484173 AAAATATCTTCGAAATGCAGCGA 57.516 34.783 0.00 5.17 34.32 4.93
229 230 5.679734 AAATATCTTCGAAATGCAGCGAT 57.320 34.783 9.44 0.00 36.31 4.58
230 231 4.658713 ATATCTTCGAAATGCAGCGATG 57.341 40.909 9.44 11.35 36.31 3.84
231 232 2.008752 TCTTCGAAATGCAGCGATGA 57.991 45.000 4.02 15.87 38.04 2.92
232 233 2.554142 TCTTCGAAATGCAGCGATGAT 58.446 42.857 4.02 0.00 36.29 2.45
233 234 2.541346 TCTTCGAAATGCAGCGATGATC 59.459 45.455 4.02 0.00 36.29 2.92
234 235 1.938625 TCGAAATGCAGCGATGATCA 58.061 45.000 4.02 0.00 0.00 2.92
235 236 2.278854 TCGAAATGCAGCGATGATCAA 58.721 42.857 4.02 0.00 0.00 2.57
236 237 2.677337 TCGAAATGCAGCGATGATCAAA 59.323 40.909 4.02 0.00 0.00 2.69
237 238 2.780014 CGAAATGCAGCGATGATCAAAC 59.220 45.455 4.02 0.00 0.00 2.93
238 239 3.486375 CGAAATGCAGCGATGATCAAACT 60.486 43.478 4.02 0.00 0.00 2.66
239 240 4.260334 CGAAATGCAGCGATGATCAAACTA 60.260 41.667 4.02 0.00 0.00 2.24
240 241 5.559608 CGAAATGCAGCGATGATCAAACTAT 60.560 40.000 4.02 0.00 0.00 2.12
241 242 4.744136 ATGCAGCGATGATCAAACTATG 57.256 40.909 4.02 0.00 0.00 2.23
242 243 3.534554 TGCAGCGATGATCAAACTATGT 58.465 40.909 4.02 0.00 0.00 2.29
243 244 4.692228 TGCAGCGATGATCAAACTATGTA 58.308 39.130 4.02 0.00 0.00 2.29
244 245 5.299949 TGCAGCGATGATCAAACTATGTAT 58.700 37.500 4.02 0.00 0.00 2.29
245 246 5.178067 TGCAGCGATGATCAAACTATGTATG 59.822 40.000 4.02 0.00 0.00 2.39
246 247 5.178252 GCAGCGATGATCAAACTATGTATGT 59.822 40.000 4.02 0.00 0.00 2.29
247 248 6.366061 GCAGCGATGATCAAACTATGTATGTA 59.634 38.462 4.02 0.00 0.00 2.29
248 249 7.411264 GCAGCGATGATCAAACTATGTATGTAG 60.411 40.741 4.02 0.00 0.00 2.74
249 250 7.596621 CAGCGATGATCAAACTATGTATGTAGT 59.403 37.037 0.00 0.00 36.50 2.73
250 251 8.144478 AGCGATGATCAAACTATGTATGTAGTT 58.856 33.333 0.00 0.00 44.54 2.24
251 252 8.217115 GCGATGATCAAACTATGTATGTAGTTG 58.783 37.037 0.00 0.00 42.48 3.16
252 253 9.249457 CGATGATCAAACTATGTATGTAGTTGT 57.751 33.333 0.00 0.00 42.48 3.32
254 255 9.890629 ATGATCAAACTATGTATGTAGTTGTGT 57.109 29.630 0.00 0.00 42.48 3.72
255 256 9.719355 TGATCAAACTATGTATGTAGTTGTGTT 57.281 29.630 0.00 0.00 42.48 3.32
257 258 9.944376 ATCAAACTATGTATGTAGTTGTGTTCT 57.056 29.630 0.56 0.00 42.48 3.01
258 259 9.772973 TCAAACTATGTATGTAGTTGTGTTCTT 57.227 29.630 0.56 0.00 42.48 2.52
260 261 9.772973 AAACTATGTATGTAGTTGTGTTCTTCA 57.227 29.630 0.56 0.00 42.48 3.02
261 262 9.944376 AACTATGTATGTAGTTGTGTTCTTCAT 57.056 29.630 0.00 0.00 41.90 2.57
262 263 9.944376 ACTATGTATGTAGTTGTGTTCTTCATT 57.056 29.630 0.00 0.00 30.95 2.57
265 266 9.897744 ATGTATGTAGTTGTGTTCTTCATTTTG 57.102 29.630 0.00 0.00 0.00 2.44
266 267 7.860373 TGTATGTAGTTGTGTTCTTCATTTTGC 59.140 33.333 0.00 0.00 0.00 3.68
267 268 6.449635 TGTAGTTGTGTTCTTCATTTTGCT 57.550 33.333 0.00 0.00 0.00 3.91
268 269 6.494842 TGTAGTTGTGTTCTTCATTTTGCTC 58.505 36.000 0.00 0.00 0.00 4.26
269 270 4.601019 AGTTGTGTTCTTCATTTTGCTCG 58.399 39.130 0.00 0.00 0.00 5.03
270 271 3.624326 TGTGTTCTTCATTTTGCTCGG 57.376 42.857 0.00 0.00 0.00 4.63
271 272 2.293122 TGTGTTCTTCATTTTGCTCGGG 59.707 45.455 0.00 0.00 0.00 5.14
272 273 2.552315 GTGTTCTTCATTTTGCTCGGGA 59.448 45.455 0.00 0.00 0.00 5.14
273 274 3.004315 GTGTTCTTCATTTTGCTCGGGAA 59.996 43.478 0.00 0.00 0.00 3.97
274 275 3.826157 TGTTCTTCATTTTGCTCGGGAAT 59.174 39.130 0.00 0.00 0.00 3.01
275 276 4.168760 GTTCTTCATTTTGCTCGGGAATG 58.831 43.478 0.00 0.00 33.24 2.67
276 277 2.164219 TCTTCATTTTGCTCGGGAATGC 59.836 45.455 0.00 0.00 32.28 3.56
277 278 1.838112 TCATTTTGCTCGGGAATGCT 58.162 45.000 0.00 0.00 32.28 3.79
278 279 2.170166 TCATTTTGCTCGGGAATGCTT 58.830 42.857 0.00 0.00 32.28 3.91
279 280 2.562298 TCATTTTGCTCGGGAATGCTTT 59.438 40.909 0.00 0.00 32.28 3.51
280 281 3.006752 TCATTTTGCTCGGGAATGCTTTT 59.993 39.130 0.00 0.00 32.28 2.27
281 282 3.467374 TTTTGCTCGGGAATGCTTTTT 57.533 38.095 0.00 0.00 0.00 1.94
312 313 8.567285 AATTTACGATTTCAATTGAGGACTCT 57.433 30.769 8.41 0.00 0.00 3.24
313 314 6.968131 TTACGATTTCAATTGAGGACTCTG 57.032 37.500 8.41 0.00 0.00 3.35
314 315 4.899502 ACGATTTCAATTGAGGACTCTGT 58.100 39.130 8.41 0.26 0.00 3.41
315 316 5.308825 ACGATTTCAATTGAGGACTCTGTT 58.691 37.500 8.41 0.00 0.00 3.16
316 317 6.464222 ACGATTTCAATTGAGGACTCTGTTA 58.536 36.000 8.41 0.00 0.00 2.41
317 318 6.591834 ACGATTTCAATTGAGGACTCTGTTAG 59.408 38.462 8.41 0.00 0.00 2.34
318 319 6.036517 CGATTTCAATTGAGGACTCTGTTAGG 59.963 42.308 8.41 0.00 0.00 2.69
319 320 4.207891 TCAATTGAGGACTCTGTTAGGC 57.792 45.455 3.38 0.00 0.00 3.93
323 324 2.978824 GGACTCTGTTAGGCCGCA 59.021 61.111 0.00 0.00 46.09 5.69
324 325 1.153549 GGACTCTGTTAGGCCGCAG 60.154 63.158 15.75 15.75 46.09 5.18
325 326 1.811679 GACTCTGTTAGGCCGCAGC 60.812 63.158 16.69 4.10 38.76 5.25
339 340 2.897350 CAGCCGATTTCGCCCCTC 60.897 66.667 0.00 0.00 38.18 4.30
340 341 3.399181 AGCCGATTTCGCCCCTCA 61.399 61.111 0.00 0.00 38.18 3.86
341 342 2.437716 GCCGATTTCGCCCCTCAA 60.438 61.111 0.00 0.00 38.18 3.02
342 343 2.043980 GCCGATTTCGCCCCTCAAA 61.044 57.895 0.00 0.00 38.18 2.69
343 344 1.384222 GCCGATTTCGCCCCTCAAAT 61.384 55.000 0.00 0.00 38.18 2.32
344 345 0.663153 CCGATTTCGCCCCTCAAATC 59.337 55.000 0.00 0.00 36.18 2.17
345 346 1.668419 CGATTTCGCCCCTCAAATCT 58.332 50.000 0.00 0.00 37.01 2.40
346 347 1.599542 CGATTTCGCCCCTCAAATCTC 59.400 52.381 0.00 0.00 37.01 2.75
347 348 2.743183 CGATTTCGCCCCTCAAATCTCT 60.743 50.000 0.00 0.00 37.01 3.10
348 349 2.113860 TTTCGCCCCTCAAATCTCTG 57.886 50.000 0.00 0.00 0.00 3.35
349 350 1.275666 TTCGCCCCTCAAATCTCTGA 58.724 50.000 0.00 0.00 0.00 3.27
350 351 1.500474 TCGCCCCTCAAATCTCTGAT 58.500 50.000 0.00 0.00 0.00 2.90
351 352 1.839994 TCGCCCCTCAAATCTCTGATT 59.160 47.619 0.00 0.00 0.00 2.57
352 353 2.239654 TCGCCCCTCAAATCTCTGATTT 59.760 45.455 0.25 0.25 0.00 2.17
353 354 2.615912 CGCCCCTCAAATCTCTGATTTC 59.384 50.000 2.92 0.00 0.00 2.17
354 355 3.683847 CGCCCCTCAAATCTCTGATTTCT 60.684 47.826 2.92 0.00 0.00 2.52
355 356 3.882288 GCCCCTCAAATCTCTGATTTCTC 59.118 47.826 2.92 0.00 0.00 2.87
356 357 4.627255 GCCCCTCAAATCTCTGATTTCTCA 60.627 45.833 2.92 0.00 0.00 3.27
367 368 3.397482 CTGATTTCTCAGCCCTTATCCG 58.603 50.000 0.00 0.00 42.36 4.18
368 369 2.771943 TGATTTCTCAGCCCTTATCCGT 59.228 45.455 0.00 0.00 0.00 4.69
369 370 2.691409 TTTCTCAGCCCTTATCCGTG 57.309 50.000 0.00 0.00 0.00 4.94
370 371 1.860641 TTCTCAGCCCTTATCCGTGA 58.139 50.000 0.00 0.00 0.00 4.35
371 372 2.088104 TCTCAGCCCTTATCCGTGAT 57.912 50.000 0.00 0.00 0.00 3.06
372 373 3.238788 TCTCAGCCCTTATCCGTGATA 57.761 47.619 0.00 0.00 0.00 2.15
373 374 3.779444 TCTCAGCCCTTATCCGTGATAT 58.221 45.455 0.00 0.00 0.00 1.63
374 375 4.930696 TCTCAGCCCTTATCCGTGATATA 58.069 43.478 0.00 0.00 0.00 0.86
375 376 5.330233 TCTCAGCCCTTATCCGTGATATAA 58.670 41.667 0.00 0.00 0.00 0.98
376 377 5.419155 TCTCAGCCCTTATCCGTGATATAAG 59.581 44.000 0.00 0.00 36.90 1.73
381 382 4.759782 CCTTATCCGTGATATAAGGGCTG 58.240 47.826 12.20 0.00 46.61 4.85
382 383 2.770164 ATCCGTGATATAAGGGCTGC 57.230 50.000 0.00 0.00 0.00 5.25
383 384 1.717032 TCCGTGATATAAGGGCTGCT 58.283 50.000 0.00 0.00 0.00 4.24
384 385 1.344438 TCCGTGATATAAGGGCTGCTG 59.656 52.381 0.00 0.00 0.00 4.41
385 386 1.344438 CCGTGATATAAGGGCTGCTGA 59.656 52.381 0.00 0.00 0.00 4.26
386 387 2.027745 CCGTGATATAAGGGCTGCTGAT 60.028 50.000 0.00 0.00 0.00 2.90
387 388 3.195610 CCGTGATATAAGGGCTGCTGATA 59.804 47.826 0.00 0.00 0.00 2.15
388 389 4.141846 CCGTGATATAAGGGCTGCTGATAT 60.142 45.833 0.00 0.00 0.00 1.63
389 390 5.069119 CCGTGATATAAGGGCTGCTGATATA 59.931 44.000 0.00 0.95 0.00 0.86
390 391 5.980116 CGTGATATAAGGGCTGCTGATATAC 59.020 44.000 0.00 0.00 0.00 1.47
391 392 5.980116 GTGATATAAGGGCTGCTGATATACG 59.020 44.000 0.00 0.00 0.00 3.06
392 393 3.895232 ATAAGGGCTGCTGATATACGG 57.105 47.619 0.00 0.00 0.00 4.02
393 394 0.687354 AAGGGCTGCTGATATACGGG 59.313 55.000 0.00 0.00 0.00 5.28
394 395 1.194781 AGGGCTGCTGATATACGGGG 61.195 60.000 0.00 0.00 0.00 5.73
395 396 1.376037 GGCTGCTGATATACGGGGC 60.376 63.158 0.00 0.00 0.00 5.80
396 397 1.376037 GCTGCTGATATACGGGGCC 60.376 63.158 0.00 0.00 0.00 5.80
397 398 1.831652 GCTGCTGATATACGGGGCCT 61.832 60.000 0.84 0.00 0.00 5.19
398 399 0.036952 CTGCTGATATACGGGGCCTG 60.037 60.000 11.83 11.83 0.00 4.85
399 400 1.376037 GCTGATATACGGGGCCTGC 60.376 63.158 13.63 0.00 0.00 4.85
400 401 1.831652 GCTGATATACGGGGCCTGCT 61.832 60.000 13.63 2.33 0.00 4.24
401 402 1.557099 CTGATATACGGGGCCTGCTA 58.443 55.000 13.63 4.88 0.00 3.49
402 403 1.478510 CTGATATACGGGGCCTGCTAG 59.521 57.143 13.63 0.00 0.00 3.42
403 404 1.076513 TGATATACGGGGCCTGCTAGA 59.923 52.381 13.63 1.97 0.00 2.43
404 405 1.751924 GATATACGGGGCCTGCTAGAG 59.248 57.143 13.63 0.00 0.00 2.43
405 406 0.481567 TATACGGGGCCTGCTAGAGT 59.518 55.000 13.63 0.00 0.00 3.24
406 407 1.115930 ATACGGGGCCTGCTAGAGTG 61.116 60.000 13.63 0.00 0.00 3.51
407 408 3.854669 CGGGGCCTGCTAGAGTGG 61.855 72.222 0.84 0.00 0.00 4.00
408 409 2.365635 GGGGCCTGCTAGAGTGGA 60.366 66.667 0.84 0.00 0.00 4.02
409 410 1.768077 GGGGCCTGCTAGAGTGGAT 60.768 63.158 0.84 0.00 0.00 3.41
410 411 0.471971 GGGGCCTGCTAGAGTGGATA 60.472 60.000 0.84 0.00 0.00 2.59
411 412 1.424638 GGGCCTGCTAGAGTGGATAA 58.575 55.000 0.84 0.00 0.00 1.75
412 413 1.346068 GGGCCTGCTAGAGTGGATAAG 59.654 57.143 0.84 0.00 0.00 1.73
413 414 1.346068 GGCCTGCTAGAGTGGATAAGG 59.654 57.143 0.00 0.00 0.00 2.69
414 415 2.320781 GCCTGCTAGAGTGGATAAGGA 58.679 52.381 0.00 0.00 0.00 3.36
415 416 2.036604 GCCTGCTAGAGTGGATAAGGAC 59.963 54.545 0.00 0.00 0.00 3.85
416 417 2.630580 CCTGCTAGAGTGGATAAGGACC 59.369 54.545 0.00 0.00 0.00 4.46
417 418 2.294791 CTGCTAGAGTGGATAAGGACCG 59.705 54.545 0.00 0.00 0.00 4.79
418 419 1.000052 GCTAGAGTGGATAAGGACCGC 60.000 57.143 0.00 0.00 38.09 5.68
420 421 1.115467 AGAGTGGATAAGGACCGCTG 58.885 55.000 0.00 0.00 46.40 5.18
421 422 1.112113 GAGTGGATAAGGACCGCTGA 58.888 55.000 0.00 0.00 46.40 4.26
422 423 1.689273 GAGTGGATAAGGACCGCTGAT 59.311 52.381 0.00 0.00 46.40 2.90
423 424 2.891580 GAGTGGATAAGGACCGCTGATA 59.108 50.000 0.00 0.00 46.40 2.15
424 425 3.511477 AGTGGATAAGGACCGCTGATAT 58.489 45.455 0.00 0.00 45.00 1.63
425 426 4.673968 AGTGGATAAGGACCGCTGATATA 58.326 43.478 0.00 0.00 45.00 0.86
426 427 4.463186 AGTGGATAAGGACCGCTGATATAC 59.537 45.833 0.00 0.00 45.00 1.47
427 428 3.442625 TGGATAAGGACCGCTGATATACG 59.557 47.826 0.00 0.00 0.00 3.06
433 434 2.654802 CCGCTGATATACGGGGTCT 58.345 57.895 3.88 0.00 45.74 3.85
434 435 0.526662 CCGCTGATATACGGGGTCTC 59.473 60.000 3.88 0.00 45.74 3.36
435 436 0.526662 CGCTGATATACGGGGTCTCC 59.473 60.000 0.00 0.00 33.85 3.71
436 437 1.887088 CGCTGATATACGGGGTCTCCT 60.887 57.143 0.00 0.00 33.85 3.69
437 438 2.617276 CGCTGATATACGGGGTCTCCTA 60.617 54.545 0.00 0.00 33.85 2.94
438 439 3.018149 GCTGATATACGGGGTCTCCTAG 58.982 54.545 0.00 0.00 0.00 3.02
439 440 3.308259 GCTGATATACGGGGTCTCCTAGA 60.308 52.174 0.00 0.00 0.00 2.43
440 441 4.519213 CTGATATACGGGGTCTCCTAGAG 58.481 52.174 0.00 0.00 0.00 2.43
441 442 4.173594 TGATATACGGGGTCTCCTAGAGA 58.826 47.826 0.00 0.00 36.22 3.10
442 443 4.789159 TGATATACGGGGTCTCCTAGAGAT 59.211 45.833 0.00 0.00 40.98 2.75
443 444 5.253330 TGATATACGGGGTCTCCTAGAGATT 59.747 44.000 0.00 0.00 40.98 2.40
444 445 2.368311 ACGGGGTCTCCTAGAGATTC 57.632 55.000 0.00 0.00 40.98 2.52
445 446 1.854280 ACGGGGTCTCCTAGAGATTCT 59.146 52.381 0.00 0.00 40.98 2.40
446 447 3.054576 ACGGGGTCTCCTAGAGATTCTA 58.945 50.000 0.00 0.00 40.98 2.10
447 448 3.462579 ACGGGGTCTCCTAGAGATTCTAA 59.537 47.826 0.00 0.00 40.98 2.10
448 449 4.106663 ACGGGGTCTCCTAGAGATTCTAAT 59.893 45.833 0.00 0.00 40.98 1.73
449 450 4.461081 CGGGGTCTCCTAGAGATTCTAATG 59.539 50.000 0.00 0.00 40.98 1.90
450 451 5.399113 GGGGTCTCCTAGAGATTCTAATGT 58.601 45.833 0.00 0.00 40.98 2.71
467 468 6.936279 TCTAATGTATGTATGCTAGGCCTTC 58.064 40.000 12.58 3.76 0.00 3.46
475 476 2.489938 TGCTAGGCCTTCGTGAAAAT 57.510 45.000 12.58 0.00 0.00 1.82
477 478 2.290008 TGCTAGGCCTTCGTGAAAATGA 60.290 45.455 12.58 0.00 0.00 2.57
570 575 0.529378 CAGCTGTGGCCATTTCCTTC 59.471 55.000 9.72 0.00 39.73 3.46
591 597 2.672874 CCGAGCGACAATGATTGAAGAA 59.327 45.455 12.80 0.00 0.00 2.52
599 605 6.183360 GCGACAATGATTGAAGAAAATTGACC 60.183 38.462 12.80 0.00 33.47 4.02
625 631 5.311265 TCTTCAGAGACTGTGAAATTGCAT 58.689 37.500 15.21 0.00 33.56 3.96
626 632 6.466812 TCTTCAGAGACTGTGAAATTGCATA 58.533 36.000 15.21 0.00 33.56 3.14
627 633 6.936335 TCTTCAGAGACTGTGAAATTGCATAA 59.064 34.615 15.21 0.00 33.56 1.90
628 634 6.486253 TCAGAGACTGTGAAATTGCATAAC 57.514 37.500 0.00 0.00 32.61 1.89
629 635 5.120674 TCAGAGACTGTGAAATTGCATAACG 59.879 40.000 0.00 0.00 32.61 3.18
630 636 4.393062 AGAGACTGTGAAATTGCATAACGG 59.607 41.667 0.00 0.00 0.00 4.44
631 637 3.119849 AGACTGTGAAATTGCATAACGGC 60.120 43.478 0.00 0.00 0.00 5.68
632 638 2.556189 ACTGTGAAATTGCATAACGGCA 59.444 40.909 0.00 0.00 43.19 5.69
633 639 2.916716 CTGTGAAATTGCATAACGGCAC 59.083 45.455 0.00 0.00 44.86 5.01
646 652 2.560861 GGCACGCGCAGATCAAAA 59.439 55.556 5.73 0.00 41.24 2.44
647 653 1.797537 GGCACGCGCAGATCAAAAC 60.798 57.895 5.73 0.00 41.24 2.43
648 654 1.207593 GCACGCGCAGATCAAAACT 59.792 52.632 5.73 0.00 38.36 2.66
649 655 0.442310 GCACGCGCAGATCAAAACTA 59.558 50.000 5.73 0.00 38.36 2.24
650 656 1.062587 GCACGCGCAGATCAAAACTAT 59.937 47.619 5.73 0.00 38.36 2.12
666 672 6.547880 TCAAAACTATTGTAAAGCAGGGAACA 59.452 34.615 0.00 0.00 0.00 3.18
673 679 0.779997 AAAGCAGGGAACATGAGGGT 59.220 50.000 0.00 0.00 0.00 4.34
677 683 1.952367 GCAGGGAACATGAGGGTTGAG 60.952 57.143 0.00 0.00 0.00 3.02
682 688 3.947834 GGGAACATGAGGGTTGAGTTATG 59.052 47.826 0.00 0.00 0.00 1.90
689 695 6.879458 ACATGAGGGTTGAGTTATGAAACTAC 59.121 38.462 0.00 0.00 46.09 2.73
690 696 6.681729 TGAGGGTTGAGTTATGAAACTACT 57.318 37.500 0.00 0.00 46.09 2.57
691 697 6.698380 TGAGGGTTGAGTTATGAAACTACTC 58.302 40.000 0.00 0.00 46.09 2.59
692 698 6.051179 AGGGTTGAGTTATGAAACTACTCC 57.949 41.667 0.00 0.00 46.09 3.85
693 699 5.045797 AGGGTTGAGTTATGAAACTACTCCC 60.046 44.000 12.31 12.31 46.09 4.30
694 700 5.045797 GGGTTGAGTTATGAAACTACTCCCT 60.046 44.000 12.67 0.00 46.09 4.20
695 701 6.107343 GGTTGAGTTATGAAACTACTCCCTC 58.893 44.000 0.00 0.00 46.09 4.30
696 702 5.934402 TGAGTTATGAAACTACTCCCTCC 57.066 43.478 0.00 0.00 46.09 4.30
697 703 4.401519 TGAGTTATGAAACTACTCCCTCCG 59.598 45.833 0.00 0.00 46.09 4.63
698 704 4.351127 AGTTATGAAACTACTCCCTCCGT 58.649 43.478 0.00 0.00 44.26 4.69
699 705 4.776308 AGTTATGAAACTACTCCCTCCGTT 59.224 41.667 0.00 0.00 44.26 4.44
700 706 5.954150 AGTTATGAAACTACTCCCTCCGTTA 59.046 40.000 0.00 0.00 44.26 3.18
701 707 6.438425 AGTTATGAAACTACTCCCTCCGTTAA 59.562 38.462 0.00 0.00 44.26 2.01
702 708 5.750352 ATGAAACTACTCCCTCCGTTAAA 57.250 39.130 0.00 0.00 0.00 1.52
703 709 4.886579 TGAAACTACTCCCTCCGTTAAAC 58.113 43.478 0.00 0.00 0.00 2.01
704 710 3.582714 AACTACTCCCTCCGTTAAACG 57.417 47.619 0.00 0.00 42.11 3.60
705 711 1.203287 ACTACTCCCTCCGTTAAACGC 59.797 52.381 0.00 0.00 40.91 4.84
706 712 1.475682 CTACTCCCTCCGTTAAACGCT 59.524 52.381 0.00 0.00 40.91 5.07
707 713 0.245813 ACTCCCTCCGTTAAACGCTC 59.754 55.000 0.00 0.00 40.91 5.03
708 714 0.531200 CTCCCTCCGTTAAACGCTCT 59.469 55.000 0.00 0.00 40.91 4.09
709 715 0.971386 TCCCTCCGTTAAACGCTCTT 59.029 50.000 0.00 0.00 40.91 2.85
710 716 2.165030 CTCCCTCCGTTAAACGCTCTTA 59.835 50.000 0.00 0.00 40.91 2.10
711 717 2.762327 TCCCTCCGTTAAACGCTCTTAT 59.238 45.455 0.00 0.00 40.91 1.73
712 718 3.953612 TCCCTCCGTTAAACGCTCTTATA 59.046 43.478 0.00 0.00 40.91 0.98
713 719 4.586001 TCCCTCCGTTAAACGCTCTTATAT 59.414 41.667 0.00 0.00 40.91 0.86
714 720 5.069516 TCCCTCCGTTAAACGCTCTTATATT 59.930 40.000 0.00 0.00 40.91 1.28
715 721 6.265196 TCCCTCCGTTAAACGCTCTTATATTA 59.735 38.462 0.00 0.00 40.91 0.98
716 722 7.039504 TCCCTCCGTTAAACGCTCTTATATTAT 60.040 37.037 0.00 0.00 40.91 1.28
717 723 7.063074 CCCTCCGTTAAACGCTCTTATATTATG 59.937 40.741 0.00 0.00 40.91 1.90
718 724 7.063074 CCTCCGTTAAACGCTCTTATATTATGG 59.937 40.741 0.00 0.00 40.91 2.74
719 725 6.869913 TCCGTTAAACGCTCTTATATTATGGG 59.130 38.462 0.00 0.00 40.91 4.00
720 726 6.869913 CCGTTAAACGCTCTTATATTATGGGA 59.130 38.462 0.00 0.00 40.91 4.37
721 727 7.148689 CCGTTAAACGCTCTTATATTATGGGAC 60.149 40.741 0.00 0.00 40.91 4.46
722 728 7.410087 CGTTAAACGCTCTTATATTATGGGACG 60.410 40.741 0.00 0.00 33.65 4.79
723 729 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
724 730 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
725 731 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
726 732 4.398358 CGCTCTTATATTATGGGACGGAGA 59.602 45.833 0.00 0.00 0.00 3.71
727 733 5.449314 CGCTCTTATATTATGGGACGGAGAG 60.449 48.000 0.00 0.00 33.16 3.20
728 734 5.652891 GCTCTTATATTATGGGACGGAGAGA 59.347 44.000 0.00 0.00 32.02 3.10
729 735 6.183360 GCTCTTATATTATGGGACGGAGAGAG 60.183 46.154 0.00 0.00 32.02 3.20
730 736 6.791371 TCTTATATTATGGGACGGAGAGAGT 58.209 40.000 0.00 0.00 0.00 3.24
731 737 6.659668 TCTTATATTATGGGACGGAGAGAGTG 59.340 42.308 0.00 0.00 0.00 3.51
732 738 1.776662 TTATGGGACGGAGAGAGTGG 58.223 55.000 0.00 0.00 0.00 4.00
733 739 0.629596 TATGGGACGGAGAGAGTGGT 59.370 55.000 0.00 0.00 0.00 4.16
736 742 1.203087 TGGGACGGAGAGAGTGGTAAA 60.203 52.381 0.00 0.00 0.00 2.01
742 748 4.377897 ACGGAGAGAGTGGTAAAAACTTG 58.622 43.478 0.00 0.00 0.00 3.16
743 749 4.141779 ACGGAGAGAGTGGTAAAAACTTGT 60.142 41.667 0.00 0.00 0.00 3.16
765 772 9.897744 CTTGTATTTCTGCTTAGTTTCAATTCA 57.102 29.630 0.00 0.00 0.00 2.57
775 782 7.025963 GCTTAGTTTCAATTCATCAAGGTCTG 58.974 38.462 0.00 0.00 0.00 3.51
776 783 5.972107 AGTTTCAATTCATCAAGGTCTGG 57.028 39.130 0.00 0.00 0.00 3.86
802 809 2.897969 AGAAAGAGGTTTGCGAGGACTA 59.102 45.455 0.00 0.00 0.00 2.59
803 810 3.056465 AGAAAGAGGTTTGCGAGGACTAG 60.056 47.826 0.00 0.00 0.00 2.57
832 1051 7.161404 TCAGGTTTATATACATGCATCAGGAC 58.839 38.462 0.00 0.00 30.34 3.85
906 1130 0.872388 CACAAAACCACCTAGGCGAC 59.128 55.000 9.30 0.00 43.14 5.19
923 1148 2.351336 GACGTGAGGCCAGGATACCG 62.351 65.000 5.01 0.00 37.17 4.02
1103 1337 0.249238 GGCGCACTCTCACAGATAGG 60.249 60.000 10.83 0.00 0.00 2.57
1104 1338 0.249238 GCGCACTCTCACAGATAGGG 60.249 60.000 0.30 0.00 0.00 3.53
1105 1339 1.393603 CGCACTCTCACAGATAGGGA 58.606 55.000 0.00 0.00 0.00 4.20
1109 1343 2.008242 CTCTCACAGATAGGGAGGGG 57.992 60.000 0.00 0.00 45.08 4.79
1110 1344 1.501170 CTCTCACAGATAGGGAGGGGA 59.499 57.143 0.00 0.00 45.08 4.81
1111 1345 2.111613 CTCTCACAGATAGGGAGGGGAT 59.888 54.545 0.00 0.00 45.08 3.85
1112 1346 2.983296 CTCACAGATAGGGAGGGGATT 58.017 52.381 0.00 0.00 44.41 3.01
1113 1347 2.636893 CTCACAGATAGGGAGGGGATTG 59.363 54.545 0.00 0.00 44.41 2.67
1114 1348 1.701847 CACAGATAGGGAGGGGATTGG 59.298 57.143 0.00 0.00 0.00 3.16
1141 1375 2.427320 CATCATCGCCGATGGGGT 59.573 61.111 25.40 10.44 40.15 4.95
1142 1376 1.227943 CATCATCGCCGATGGGGTT 60.228 57.895 25.40 7.03 40.15 4.11
1143 1377 0.819259 CATCATCGCCGATGGGGTTT 60.819 55.000 25.40 4.70 40.15 3.27
1152 1395 2.032426 GCCGATGGGGTTTAACATAACG 59.968 50.000 0.00 0.00 38.44 3.18
1165 1408 1.128507 ACATAACGTGCAACAGCATCG 59.871 47.619 0.00 9.60 40.93 3.84
1167 1410 0.787787 TAACGTGCAACAGCATCGAC 59.212 50.000 15.37 0.00 40.93 4.20
1180 1423 2.158769 AGCATCGACTATCCATTTGGCA 60.159 45.455 0.00 0.00 34.44 4.92
1183 1426 2.754472 TCGACTATCCATTTGGCATCG 58.246 47.619 0.00 0.00 34.44 3.84
1188 1431 1.696063 ATCCATTTGGCATCGAAGGG 58.304 50.000 0.00 0.00 39.06 3.95
1190 1433 1.215173 TCCATTTGGCATCGAAGGGAT 59.785 47.619 0.00 0.00 40.98 3.85
1194 1437 0.249868 TTGGCATCGAAGGGATAGCG 60.250 55.000 0.00 0.00 32.85 4.26
1196 1439 1.300931 GCATCGAAGGGATAGCGCA 60.301 57.895 11.47 0.00 32.85 6.09
1197 1440 0.880278 GCATCGAAGGGATAGCGCAA 60.880 55.000 11.47 0.00 32.85 4.85
1232 1475 2.311701 TAACGTGCGGCCGAAACAG 61.312 57.895 33.48 21.92 0.00 3.16
1451 1694 1.533625 GCCACTGGATGCAACTACAA 58.466 50.000 0.00 0.00 0.00 2.41
1455 1698 2.161012 CACTGGATGCAACTACAAGCTG 59.839 50.000 0.00 0.00 0.00 4.24
1481 1724 0.387929 AAGTTCAGCAACTCGTCGGA 59.612 50.000 0.00 0.00 42.45 4.55
1490 1733 0.318445 AACTCGTCGGACGGTGAAAG 60.318 55.000 28.07 19.86 42.81 2.62
1501 1768 1.134220 ACGGTGAAAGTTTCTGCTCCA 60.134 47.619 16.33 0.00 0.00 3.86
1505 1772 2.550180 GTGAAAGTTTCTGCTCCACCTC 59.450 50.000 16.33 0.00 0.00 3.85
1516 1783 1.949847 CTCCACCTCCTGCGACGAAT 61.950 60.000 0.00 0.00 0.00 3.34
1517 1784 0.681887 TCCACCTCCTGCGACGAATA 60.682 55.000 0.00 0.00 0.00 1.75
1539 1806 1.213094 CCGGCACCGTCGATTGTATC 61.213 60.000 8.49 0.00 37.81 2.24
1546 1813 1.070134 CCGTCGATTGTATCCATGGGT 59.930 52.381 13.02 7.52 0.00 4.51
1629 1896 5.809562 CGACAAGATAGAAGAGCAAGACATT 59.190 40.000 0.00 0.00 0.00 2.71
1633 1900 2.875094 AGAAGAGCAAGACATTGGCT 57.125 45.000 0.00 0.00 36.88 4.75
1635 1902 3.604582 AGAAGAGCAAGACATTGGCTAC 58.395 45.455 0.00 0.00 36.88 3.58
1705 1972 2.488771 CTTCATGGGTGGCAGAGGCA 62.489 60.000 0.00 0.00 43.71 4.75
1706 1973 2.036098 CATGGGTGGCAGAGGCAA 59.964 61.111 0.00 0.00 43.71 4.52
1709 1976 3.455469 GGGTGGCAGAGGCAATGC 61.455 66.667 0.00 0.00 43.71 3.56
1710 1977 3.818787 GGTGGCAGAGGCAATGCG 61.819 66.667 0.00 0.00 44.80 4.73
1716 1983 1.449070 CAGAGGCAATGCGCAGAGA 60.449 57.895 18.32 0.00 45.17 3.10
1745 2018 1.795170 GACATGTTGTTGCCGGCTGT 61.795 55.000 29.70 21.43 0.00 4.40
1836 2109 0.163788 CGCGAAGGTACTGCAACAAG 59.836 55.000 0.00 0.00 40.86 3.16
2005 2300 5.045215 CACATGAAAGCACACAAATTCACT 58.955 37.500 0.00 0.00 34.88 3.41
2007 2302 5.521010 ACATGAAAGCACACAAATTCACTTG 59.479 36.000 0.00 0.00 34.88 3.16
2008 2303 4.431809 TGAAAGCACACAAATTCACTTGG 58.568 39.130 0.00 0.00 0.00 3.61
2281 2587 1.134670 ACTATTGAAGGCCGAGACAGC 60.135 52.381 0.00 0.00 0.00 4.40
2314 2620 4.944962 TCGGTTTCATCACTTGCATAAG 57.055 40.909 0.00 0.00 39.86 1.73
2316 2622 5.483811 TCGGTTTCATCACTTGCATAAGTA 58.516 37.500 0.00 0.00 45.12 2.24
2370 2676 3.582780 GGTAAACTACCGAACAGGACAG 58.417 50.000 0.00 0.00 45.00 3.51
2460 2769 6.751157 TGATTTCTGAAATGAAGTGTTGCAT 58.249 32.000 19.59 0.00 0.00 3.96
2538 2847 1.507141 GACTTCTGCCACAACACCCG 61.507 60.000 0.00 0.00 0.00 5.28
2557 2866 2.693591 CCGAGGAGGTTATACTTGCTCA 59.306 50.000 10.18 0.00 41.54 4.26
2607 2916 2.154462 CCTTACAGGGACAAACTGCAG 58.846 52.381 13.48 13.48 39.55 4.41
2670 3005 5.607119 TCTAGAAAGATCAACCAAAACGC 57.393 39.130 0.00 0.00 0.00 4.84
2683 3018 1.872313 CAAAACGCATGTTGCCCAAAT 59.128 42.857 0.00 0.00 41.12 2.32
2781 3117 4.119376 TGTTCTGAACATGGATGCAGTCC 61.119 47.826 18.69 7.90 41.16 3.85
2792 3128 4.640771 GGATGCAGTCCCCAATATAAGA 57.359 45.455 0.00 0.00 41.50 2.10
2793 3129 5.184892 GGATGCAGTCCCCAATATAAGAT 57.815 43.478 0.00 0.00 41.50 2.40
2794 3130 5.189180 GGATGCAGTCCCCAATATAAGATC 58.811 45.833 0.00 0.00 41.50 2.75
2795 3131 5.280676 GGATGCAGTCCCCAATATAAGATCA 60.281 44.000 0.00 0.00 41.50 2.92
2797 3133 6.204852 TGCAGTCCCCAATATAAGATCATT 57.795 37.500 0.00 0.00 0.00 2.57
2798 3134 6.613699 TGCAGTCCCCAATATAAGATCATTT 58.386 36.000 0.00 0.00 0.00 2.32
2799 3135 7.068702 TGCAGTCCCCAATATAAGATCATTTT 58.931 34.615 0.00 0.00 0.00 1.82
2800 3136 7.014518 TGCAGTCCCCAATATAAGATCATTTTG 59.985 37.037 0.00 0.00 0.00 2.44
2801 3137 7.373493 CAGTCCCCAATATAAGATCATTTTGC 58.627 38.462 0.00 0.00 0.00 3.68
2802 3138 7.014518 CAGTCCCCAATATAAGATCATTTTGCA 59.985 37.037 0.00 0.00 0.00 4.08
2803 3139 7.564660 AGTCCCCAATATAAGATCATTTTGCAA 59.435 33.333 0.00 0.00 0.00 4.08
2805 3141 6.647895 CCCCAATATAAGATCATTTTGCAAGC 59.352 38.462 0.00 0.00 0.00 4.01
2806 3142 7.439381 CCCAATATAAGATCATTTTGCAAGCT 58.561 34.615 0.00 0.00 0.00 3.74
2807 3143 8.579006 CCCAATATAAGATCATTTTGCAAGCTA 58.421 33.333 0.00 0.00 0.00 3.32
2847 3183 7.696618 TGATCTTATATTATGGGATGGAGGG 57.303 40.000 0.00 0.00 0.00 4.30
2849 3185 7.570232 TGATCTTATATTATGGGATGGAGGGAG 59.430 40.741 0.00 0.00 0.00 4.30
2852 3188 7.844779 TCTTATATTATGGGATGGAGGGAGTAC 59.155 40.741 0.00 0.00 0.00 2.73
2853 3189 3.717507 TTATGGGATGGAGGGAGTACA 57.282 47.619 0.00 0.00 0.00 2.90
2854 3190 2.823460 ATGGGATGGAGGGAGTACAT 57.177 50.000 0.00 0.00 0.00 2.29
2862 3198 4.665833 TGGAGGGAGTACATGTTAATCG 57.334 45.455 2.30 0.00 0.00 3.34
2869 3205 7.798071 AGGGAGTACATGTTAATCGGAATTAA 58.202 34.615 2.30 0.00 35.46 1.40
3301 3983 6.521162 AGGCAATTCAGATAAAACGGTTTTT 58.479 32.000 22.44 11.37 38.51 1.94
3303 3985 6.399564 GGCAATTCAGATAAAACGGTTTTTCG 60.400 38.462 22.44 14.59 36.32 3.46
3317 3999 2.490115 GTTTTTCGATGGTGCCATGGTA 59.510 45.455 14.67 5.86 36.70 3.25
3342 4025 7.004555 TGTTCTGATGGAGTACAGTGTTTAT 57.995 36.000 0.00 0.00 35.84 1.40
3345 4028 7.712204 TCTGATGGAGTACAGTGTTTATACA 57.288 36.000 0.00 0.00 35.84 2.29
3346 4029 7.772166 TCTGATGGAGTACAGTGTTTATACAG 58.228 38.462 0.00 3.97 34.24 2.74
3374 4059 9.186323 CGATAATTCATAAGAGTTCAGTACCTG 57.814 37.037 0.00 0.00 0.00 4.00
3395 4080 6.127451 ACCTGACCCAAGAAAAAGTGTTAAAG 60.127 38.462 0.00 0.00 0.00 1.85
3406 4091 5.526010 AAAGTGTTAAAGTATCTTCGCGG 57.474 39.130 6.13 0.00 0.00 6.46
3449 4134 5.853282 CACAAGCAGATACACAAAAACTAGC 59.147 40.000 0.00 0.00 0.00 3.42
3450 4135 5.765182 ACAAGCAGATACACAAAAACTAGCT 59.235 36.000 0.00 0.00 0.00 3.32
3451 4136 6.263168 ACAAGCAGATACACAAAAACTAGCTT 59.737 34.615 0.00 0.00 38.95 3.74
3504 4189 9.855021 GCAATTTATAAAGCTCTAAAAGGACAA 57.145 29.630 3.94 0.00 0.00 3.18
3610 4295 4.582869 ACATGTGCATAGAGTGTTCACAT 58.417 39.130 0.00 0.00 45.82 3.21
3698 4383 6.080406 CACTCCTTTTCTTCGAATAAAGTGC 58.920 40.000 21.62 0.00 0.00 4.40
3702 4387 6.592607 TCCTTTTCTTCGAATAAAGTGCGTAT 59.407 34.615 21.62 0.00 0.00 3.06
3847 4532 9.884814 ATGACTATATAAGAGAAGGTTACCTGT 57.115 33.333 3.99 0.00 32.13 4.00
4160 4845 4.704965 AGTTATTCCGTAAGAATGGAGGC 58.295 43.478 0.00 0.00 45.11 4.70
4986 5671 0.324285 AGAAGCAGGTGAAGAGCAGG 59.676 55.000 0.00 0.00 0.00 4.85
5033 5718 7.446319 TCTGTGAGATGCTTAAATATGAATGGG 59.554 37.037 0.00 0.00 0.00 4.00
5191 5876 0.320771 GAGGCAAGCTCGACTTCCAA 60.321 55.000 0.00 0.00 36.04 3.53
5213 5898 2.941720 CCTGCACTATTCAGAAGGAAGC 59.058 50.000 0.00 0.00 39.30 3.86
5418 6107 7.504911 CACAGGAGAAATTCTTGATATCCCAAT 59.495 37.037 0.00 0.00 36.46 3.16
5499 6188 4.184629 GTTCAGGATATCACCATATCGGC 58.815 47.826 4.83 0.00 41.41 5.54
5537 6226 6.902974 AGGGAATAGGCAAATTTTCCAGTTAT 59.097 34.615 9.62 0.00 39.52 1.89
5542 6231 3.616821 GGCAAATTTTCCAGTTATTCGGC 59.383 43.478 1.60 0.00 0.00 5.54
5585 6274 2.577593 GGTGACCCACCGAGTAGC 59.422 66.667 0.00 0.00 44.95 3.58
5586 6275 2.280552 GGTGACCCACCGAGTAGCA 61.281 63.158 0.00 0.00 44.95 3.49
5587 6276 1.669440 GTGACCCACCGAGTAGCAA 59.331 57.895 0.00 0.00 0.00 3.91
5613 6302 2.614057 CAGACCAAGATGCCGATTAACC 59.386 50.000 0.00 0.00 0.00 2.85
5640 6329 9.023962 AGCTGATATTCACATTTGTTCCTTAAA 57.976 29.630 0.00 0.00 0.00 1.52
5684 6374 0.896019 ACCCTCTCACCTGACTGACG 60.896 60.000 0.00 0.00 0.00 4.35
5690 6380 1.440518 CACCTGACTGACGTCGACG 60.441 63.158 34.58 34.58 43.21 5.12
5747 6438 1.722011 AATGTAGTGCACACGCCTAC 58.278 50.000 21.04 12.59 40.86 3.18
5975 7961 3.140707 TGGATTCATGGCTTCATGGGTAT 59.859 43.478 6.53 0.00 46.12 2.73
5976 7962 4.353489 TGGATTCATGGCTTCATGGGTATA 59.647 41.667 6.53 0.00 46.12 1.47
5977 7963 5.163001 TGGATTCATGGCTTCATGGGTATAA 60.163 40.000 6.53 0.00 46.12 0.98
5978 7964 5.954150 GGATTCATGGCTTCATGGGTATAAT 59.046 40.000 6.53 0.00 46.12 1.28
6005 7991 7.961326 ATTTTACCACCTCAAAGCATAATCT 57.039 32.000 0.00 0.00 0.00 2.40
6046 8032 5.664457 TGAAAGTATGCAGGATGTGAGTAG 58.336 41.667 0.00 0.00 39.31 2.57
6160 8482 9.886132 AAAACATATACTCCTACTTTGGTACAG 57.114 33.333 0.00 0.00 42.39 2.74
6230 8552 7.940850 GCCAATAGCTGTTCCAAAATATAGAA 58.059 34.615 0.00 0.00 38.99 2.10
6252 8574 7.510407 AGAAATAAAGATCCTAGGTTGTAGCC 58.490 38.462 9.08 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.368808 CAAACTCGCGCACGGTGG 62.369 66.667 8.75 1.32 40.63 4.61
27 28 3.334751 TCAAACTCGCGCACGGTG 61.335 61.111 8.75 3.15 40.63 4.94
28 29 3.335534 GTCAAACTCGCGCACGGT 61.336 61.111 8.75 0.00 40.63 4.83
29 30 4.409588 CGTCAAACTCGCGCACGG 62.410 66.667 8.75 0.00 40.63 4.94
36 37 1.205064 CTGCTTGGCGTCAAACTCG 59.795 57.895 3.10 0.00 31.77 4.18
37 38 1.576421 CCTGCTTGGCGTCAAACTC 59.424 57.895 3.10 0.00 31.77 3.01
38 39 3.749981 CCTGCTTGGCGTCAAACT 58.250 55.556 3.10 0.00 31.77 2.66
68 69 3.191539 CTTGCTCCTCGGCTTCGC 61.192 66.667 0.00 0.00 0.00 4.70
69 70 1.807573 GTCTTGCTCCTCGGCTTCG 60.808 63.158 0.00 0.00 0.00 3.79
70 71 0.320771 TTGTCTTGCTCCTCGGCTTC 60.321 55.000 0.00 0.00 0.00 3.86
71 72 0.321122 CTTGTCTTGCTCCTCGGCTT 60.321 55.000 0.00 0.00 0.00 4.35
72 73 1.188219 TCTTGTCTTGCTCCTCGGCT 61.188 55.000 0.00 0.00 0.00 5.52
73 74 0.107945 ATCTTGTCTTGCTCCTCGGC 60.108 55.000 0.00 0.00 0.00 5.54
74 75 1.066573 ACATCTTGTCTTGCTCCTCGG 60.067 52.381 0.00 0.00 0.00 4.63
75 76 2.376808 ACATCTTGTCTTGCTCCTCG 57.623 50.000 0.00 0.00 0.00 4.63
76 77 4.193826 TGTACATCTTGTCTTGCTCCTC 57.806 45.455 0.00 0.00 0.00 3.71
77 78 4.679106 CGATGTACATCTTGTCTTGCTCCT 60.679 45.833 28.51 0.00 35.72 3.69
78 79 3.553511 CGATGTACATCTTGTCTTGCTCC 59.446 47.826 28.51 3.68 35.72 4.70
79 80 4.424626 TCGATGTACATCTTGTCTTGCTC 58.575 43.478 28.51 4.68 35.72 4.26
80 81 4.456280 TCGATGTACATCTTGTCTTGCT 57.544 40.909 28.51 0.00 35.72 3.91
81 82 5.046529 AGATCGATGTACATCTTGTCTTGC 58.953 41.667 28.51 12.16 35.72 4.01
82 83 6.930973 CAAGATCGATGTACATCTTGTCTTG 58.069 40.000 32.23 32.23 45.93 3.02
88 89 5.360999 TGGAGACAAGATCGATGTACATCTT 59.639 40.000 28.51 16.83 39.49 2.40
89 90 4.889995 TGGAGACAAGATCGATGTACATCT 59.110 41.667 28.51 14.67 37.44 2.90
90 91 5.188327 TGGAGACAAGATCGATGTACATC 57.812 43.478 23.47 23.47 37.44 3.06
105 106 2.825532 TCACTCATCGTCATTGGAGACA 59.174 45.455 0.00 0.00 38.43 3.41
106 107 3.119316 ACTCACTCATCGTCATTGGAGAC 60.119 47.826 0.00 0.00 35.19 3.36
107 108 3.092301 ACTCACTCATCGTCATTGGAGA 58.908 45.455 0.00 0.00 0.00 3.71
108 109 3.185330 CACTCACTCATCGTCATTGGAG 58.815 50.000 0.00 0.00 0.00 3.86
109 110 2.675032 GCACTCACTCATCGTCATTGGA 60.675 50.000 0.00 0.00 0.00 3.53
110 111 1.662629 GCACTCACTCATCGTCATTGG 59.337 52.381 0.00 0.00 0.00 3.16
111 112 1.662629 GGCACTCACTCATCGTCATTG 59.337 52.381 0.00 0.00 0.00 2.82
112 113 1.737029 CGGCACTCACTCATCGTCATT 60.737 52.381 0.00 0.00 0.00 2.57
113 114 0.179127 CGGCACTCACTCATCGTCAT 60.179 55.000 0.00 0.00 0.00 3.06
114 115 1.212751 CGGCACTCACTCATCGTCA 59.787 57.895 0.00 0.00 0.00 4.35
115 116 2.161486 GCGGCACTCACTCATCGTC 61.161 63.158 0.00 0.00 0.00 4.20
116 117 2.125912 GCGGCACTCACTCATCGT 60.126 61.111 0.00 0.00 0.00 3.73
117 118 2.887568 GGCGGCACTCACTCATCG 60.888 66.667 3.07 0.00 0.00 3.84
118 119 2.887568 CGGCGGCACTCACTCATC 60.888 66.667 10.53 0.00 0.00 2.92
139 140 2.747855 GAGCTCTTTGGGTGGCGG 60.748 66.667 6.43 0.00 0.00 6.13
140 141 2.747855 GGAGCTCTTTGGGTGGCG 60.748 66.667 14.64 0.00 0.00 5.69
141 142 1.676967 CTGGAGCTCTTTGGGTGGC 60.677 63.158 14.64 0.00 0.00 5.01
142 143 0.607489 CACTGGAGCTCTTTGGGTGG 60.607 60.000 14.64 0.00 0.00 4.61
143 144 0.397941 TCACTGGAGCTCTTTGGGTG 59.602 55.000 14.64 14.29 0.00 4.61
144 145 0.689623 CTCACTGGAGCTCTTTGGGT 59.310 55.000 14.64 2.99 33.67 4.51
145 146 3.547567 CTCACTGGAGCTCTTTGGG 57.452 57.895 14.64 4.48 33.67 4.12
154 155 1.532868 CAAAAACGGAGCTCACTGGAG 59.467 52.381 17.19 1.73 44.33 3.86
155 156 1.593196 CAAAAACGGAGCTCACTGGA 58.407 50.000 17.19 0.00 0.00 3.86
156 157 0.593128 CCAAAAACGGAGCTCACTGG 59.407 55.000 17.19 8.16 0.00 4.00
157 158 0.040067 GCCAAAAACGGAGCTCACTG 60.040 55.000 17.19 7.19 0.00 3.66
158 159 0.179018 AGCCAAAAACGGAGCTCACT 60.179 50.000 17.19 0.00 0.00 3.41
159 160 1.464997 CTAGCCAAAAACGGAGCTCAC 59.535 52.381 17.19 4.01 36.79 3.51
160 161 1.071699 ACTAGCCAAAAACGGAGCTCA 59.928 47.619 17.19 0.00 36.79 4.26
161 162 1.809684 ACTAGCCAAAAACGGAGCTC 58.190 50.000 4.71 4.71 36.79 4.09
162 163 2.271944 AACTAGCCAAAAACGGAGCT 57.728 45.000 0.00 0.00 39.37 4.09
163 164 3.119955 CCTAAACTAGCCAAAAACGGAGC 60.120 47.826 0.00 0.00 0.00 4.70
164 165 3.439129 CCCTAAACTAGCCAAAAACGGAG 59.561 47.826 0.00 0.00 0.00 4.63
165 166 3.181441 ACCCTAAACTAGCCAAAAACGGA 60.181 43.478 0.00 0.00 0.00 4.69
166 167 3.151554 ACCCTAAACTAGCCAAAAACGG 58.848 45.455 0.00 0.00 0.00 4.44
167 168 4.393990 CCTACCCTAAACTAGCCAAAAACG 59.606 45.833 0.00 0.00 0.00 3.60
168 169 4.703575 CCCTACCCTAAACTAGCCAAAAAC 59.296 45.833 0.00 0.00 0.00 2.43
169 170 4.811752 GCCCTACCCTAAACTAGCCAAAAA 60.812 45.833 0.00 0.00 0.00 1.94
170 171 3.308617 GCCCTACCCTAAACTAGCCAAAA 60.309 47.826 0.00 0.00 0.00 2.44
171 172 2.240414 GCCCTACCCTAAACTAGCCAAA 59.760 50.000 0.00 0.00 0.00 3.28
172 173 1.841919 GCCCTACCCTAAACTAGCCAA 59.158 52.381 0.00 0.00 0.00 4.52
173 174 1.503800 GCCCTACCCTAAACTAGCCA 58.496 55.000 0.00 0.00 0.00 4.75
174 175 0.391966 CGCCCTACCCTAAACTAGCC 59.608 60.000 0.00 0.00 0.00 3.93
175 176 0.391966 CCGCCCTACCCTAAACTAGC 59.608 60.000 0.00 0.00 0.00 3.42
176 177 0.391966 GCCGCCCTACCCTAAACTAG 59.608 60.000 0.00 0.00 0.00 2.57
177 178 0.325484 TGCCGCCCTACCCTAAACTA 60.325 55.000 0.00 0.00 0.00 2.24
178 179 0.986550 ATGCCGCCCTACCCTAAACT 60.987 55.000 0.00 0.00 0.00 2.66
179 180 0.534427 GATGCCGCCCTACCCTAAAC 60.534 60.000 0.00 0.00 0.00 2.01
180 181 1.834301 GATGCCGCCCTACCCTAAA 59.166 57.895 0.00 0.00 0.00 1.85
181 182 2.504274 CGATGCCGCCCTACCCTAA 61.504 63.158 0.00 0.00 0.00 2.69
182 183 2.915659 CGATGCCGCCCTACCCTA 60.916 66.667 0.00 0.00 0.00 3.53
192 193 5.034554 AGATATTTTACATTGCGATGCCG 57.965 39.130 14.18 0.00 36.72 5.69
193 194 5.565259 CGAAGATATTTTACATTGCGATGCC 59.435 40.000 14.18 0.00 36.72 4.40
194 195 6.362686 TCGAAGATATTTTACATTGCGATGC 58.637 36.000 14.18 0.00 36.72 3.91
195 196 8.766493 TTTCGAAGATATTTTACATTGCGATG 57.234 30.769 12.66 12.66 36.24 3.84
196 197 9.385902 CATTTCGAAGATATTTTACATTGCGAT 57.614 29.630 0.00 0.00 35.04 4.58
197 198 7.375808 GCATTTCGAAGATATTTTACATTGCGA 59.624 33.333 0.00 0.00 35.04 5.10
198 199 7.165647 TGCATTTCGAAGATATTTTACATTGCG 59.834 33.333 0.00 0.00 35.04 4.85
199 200 8.338985 TGCATTTCGAAGATATTTTACATTGC 57.661 30.769 0.00 0.00 35.04 3.56
200 201 8.474577 GCTGCATTTCGAAGATATTTTACATTG 58.525 33.333 0.00 0.00 35.04 2.82
201 202 7.376866 CGCTGCATTTCGAAGATATTTTACATT 59.623 33.333 0.00 0.00 35.04 2.71
202 203 6.852853 CGCTGCATTTCGAAGATATTTTACAT 59.147 34.615 0.00 0.00 35.04 2.29
203 204 6.036626 TCGCTGCATTTCGAAGATATTTTACA 59.963 34.615 0.00 0.00 35.04 2.41
204 205 6.418956 TCGCTGCATTTCGAAGATATTTTAC 58.581 36.000 0.00 0.00 35.04 2.01
205 206 6.597262 TCGCTGCATTTCGAAGATATTTTA 57.403 33.333 0.00 0.00 35.04 1.52
206 207 5.484173 TCGCTGCATTTCGAAGATATTTT 57.516 34.783 0.00 0.00 35.04 1.82
207 208 5.237127 TCATCGCTGCATTTCGAAGATATTT 59.763 36.000 9.35 0.00 38.28 1.40
208 209 4.751600 TCATCGCTGCATTTCGAAGATATT 59.248 37.500 9.35 0.00 38.28 1.28
209 210 4.309933 TCATCGCTGCATTTCGAAGATAT 58.690 39.130 9.35 0.00 38.28 1.63
210 211 3.716601 TCATCGCTGCATTTCGAAGATA 58.283 40.909 9.35 0.00 38.28 1.98
211 212 2.554142 TCATCGCTGCATTTCGAAGAT 58.446 42.857 9.35 0.00 38.28 2.40
212 213 2.008752 TCATCGCTGCATTTCGAAGA 57.991 45.000 9.35 8.05 38.28 2.87
213 214 2.286025 TGATCATCGCTGCATTTCGAAG 59.714 45.455 9.35 6.13 38.28 3.79
214 215 2.278854 TGATCATCGCTGCATTTCGAA 58.721 42.857 9.35 0.00 38.28 3.71
215 216 1.938625 TGATCATCGCTGCATTTCGA 58.061 45.000 0.00 8.02 39.17 3.71
216 217 2.742954 TTGATCATCGCTGCATTTCG 57.257 45.000 0.00 0.00 0.00 3.46
217 218 4.025015 AGTTTGATCATCGCTGCATTTC 57.975 40.909 0.00 0.00 0.00 2.17
218 219 5.066893 ACATAGTTTGATCATCGCTGCATTT 59.933 36.000 0.00 0.00 0.00 2.32
219 220 4.577693 ACATAGTTTGATCATCGCTGCATT 59.422 37.500 0.00 0.00 0.00 3.56
220 221 4.132336 ACATAGTTTGATCATCGCTGCAT 58.868 39.130 0.00 0.00 0.00 3.96
221 222 3.534554 ACATAGTTTGATCATCGCTGCA 58.465 40.909 0.00 0.00 0.00 4.41
222 223 5.178252 ACATACATAGTTTGATCATCGCTGC 59.822 40.000 0.00 0.00 0.00 5.25
223 224 6.775939 ACATACATAGTTTGATCATCGCTG 57.224 37.500 0.00 0.00 0.00 5.18
224 225 7.661968 ACTACATACATAGTTTGATCATCGCT 58.338 34.615 0.00 0.00 30.99 4.93
225 226 7.875316 ACTACATACATAGTTTGATCATCGC 57.125 36.000 0.00 0.00 30.99 4.58
226 227 9.249457 ACAACTACATACATAGTTTGATCATCG 57.751 33.333 0.00 0.00 41.62 3.84
228 229 9.890629 ACACAACTACATACATAGTTTGATCAT 57.109 29.630 0.00 0.00 41.62 2.45
229 230 9.719355 AACACAACTACATACATAGTTTGATCA 57.281 29.630 0.00 0.00 41.62 2.92
231 232 9.944376 AGAACACAACTACATACATAGTTTGAT 57.056 29.630 11.40 4.17 41.62 2.57
232 233 9.772973 AAGAACACAACTACATACATAGTTTGA 57.227 29.630 11.40 0.00 41.62 2.69
234 235 9.772973 TGAAGAACACAACTACATACATAGTTT 57.227 29.630 0.00 0.00 41.62 2.66
235 236 9.944376 ATGAAGAACACAACTACATACATAGTT 57.056 29.630 0.00 0.00 44.50 2.24
236 237 9.944376 AATGAAGAACACAACTACATACATAGT 57.056 29.630 0.00 0.00 36.96 2.12
239 240 9.897744 CAAAATGAAGAACACAACTACATACAT 57.102 29.630 0.00 0.00 0.00 2.29
240 241 7.860373 GCAAAATGAAGAACACAACTACATACA 59.140 33.333 0.00 0.00 0.00 2.29
241 242 8.076178 AGCAAAATGAAGAACACAACTACATAC 58.924 33.333 0.00 0.00 0.00 2.39
242 243 8.165239 AGCAAAATGAAGAACACAACTACATA 57.835 30.769 0.00 0.00 0.00 2.29
243 244 7.042797 AGCAAAATGAAGAACACAACTACAT 57.957 32.000 0.00 0.00 0.00 2.29
244 245 6.449635 AGCAAAATGAAGAACACAACTACA 57.550 33.333 0.00 0.00 0.00 2.74
245 246 5.621228 CGAGCAAAATGAAGAACACAACTAC 59.379 40.000 0.00 0.00 0.00 2.73
246 247 5.277779 CCGAGCAAAATGAAGAACACAACTA 60.278 40.000 0.00 0.00 0.00 2.24
247 248 4.498009 CCGAGCAAAATGAAGAACACAACT 60.498 41.667 0.00 0.00 0.00 3.16
248 249 3.730715 CCGAGCAAAATGAAGAACACAAC 59.269 43.478 0.00 0.00 0.00 3.32
249 250 3.243367 CCCGAGCAAAATGAAGAACACAA 60.243 43.478 0.00 0.00 0.00 3.33
250 251 2.293122 CCCGAGCAAAATGAAGAACACA 59.707 45.455 0.00 0.00 0.00 3.72
251 252 2.552315 TCCCGAGCAAAATGAAGAACAC 59.448 45.455 0.00 0.00 0.00 3.32
252 253 2.857483 TCCCGAGCAAAATGAAGAACA 58.143 42.857 0.00 0.00 0.00 3.18
253 254 3.915437 TTCCCGAGCAAAATGAAGAAC 57.085 42.857 0.00 0.00 0.00 3.01
254 255 3.367292 GCATTCCCGAGCAAAATGAAGAA 60.367 43.478 0.00 0.00 33.22 2.52
255 256 2.164219 GCATTCCCGAGCAAAATGAAGA 59.836 45.455 0.00 0.00 33.22 2.87
256 257 2.165030 AGCATTCCCGAGCAAAATGAAG 59.835 45.455 0.00 0.00 33.22 3.02
257 258 2.170166 AGCATTCCCGAGCAAAATGAA 58.830 42.857 0.00 0.00 33.22 2.57
258 259 1.838112 AGCATTCCCGAGCAAAATGA 58.162 45.000 0.00 0.00 33.22 2.57
259 260 2.660189 AAGCATTCCCGAGCAAAATG 57.340 45.000 0.00 0.00 34.30 2.32
260 261 3.683365 AAAAGCATTCCCGAGCAAAAT 57.317 38.095 0.00 0.00 0.00 1.82
261 262 3.467374 AAAAAGCATTCCCGAGCAAAA 57.533 38.095 0.00 0.00 0.00 2.44
286 287 9.667107 AGAGTCCTCAATTGAAATCGTAAATTA 57.333 29.630 9.88 0.00 0.00 1.40
287 288 8.454106 CAGAGTCCTCAATTGAAATCGTAAATT 58.546 33.333 9.88 0.00 0.00 1.82
288 289 7.607991 ACAGAGTCCTCAATTGAAATCGTAAAT 59.392 33.333 9.88 0.00 0.00 1.40
289 290 6.934645 ACAGAGTCCTCAATTGAAATCGTAAA 59.065 34.615 9.88 0.00 0.00 2.01
290 291 6.464222 ACAGAGTCCTCAATTGAAATCGTAA 58.536 36.000 9.88 0.00 0.00 3.18
291 292 6.037786 ACAGAGTCCTCAATTGAAATCGTA 57.962 37.500 9.88 0.00 0.00 3.43
292 293 4.899502 ACAGAGTCCTCAATTGAAATCGT 58.100 39.130 9.88 4.83 0.00 3.73
293 294 5.869753 AACAGAGTCCTCAATTGAAATCG 57.130 39.130 9.88 4.28 0.00 3.34
294 295 6.183360 GCCTAACAGAGTCCTCAATTGAAATC 60.183 42.308 9.88 4.59 0.00 2.17
295 296 5.649831 GCCTAACAGAGTCCTCAATTGAAAT 59.350 40.000 9.88 0.00 0.00 2.17
296 297 5.003804 GCCTAACAGAGTCCTCAATTGAAA 58.996 41.667 9.88 0.00 0.00 2.69
297 298 4.565652 GGCCTAACAGAGTCCTCAATTGAA 60.566 45.833 9.88 0.00 0.00 2.69
298 299 3.055094 GGCCTAACAGAGTCCTCAATTGA 60.055 47.826 8.12 8.12 0.00 2.57
299 300 3.274288 GGCCTAACAGAGTCCTCAATTG 58.726 50.000 0.00 0.00 0.00 2.32
300 301 2.093447 CGGCCTAACAGAGTCCTCAATT 60.093 50.000 0.00 0.00 0.00 2.32
301 302 1.482593 CGGCCTAACAGAGTCCTCAAT 59.517 52.381 0.00 0.00 0.00 2.57
302 303 0.895530 CGGCCTAACAGAGTCCTCAA 59.104 55.000 0.00 0.00 0.00 3.02
303 304 1.605058 GCGGCCTAACAGAGTCCTCA 61.605 60.000 0.00 0.00 0.00 3.86
304 305 1.142097 GCGGCCTAACAGAGTCCTC 59.858 63.158 0.00 0.00 0.00 3.71
305 306 1.608717 CTGCGGCCTAACAGAGTCCT 61.609 60.000 10.85 0.00 35.90 3.85
306 307 1.153549 CTGCGGCCTAACAGAGTCC 60.154 63.158 10.85 0.00 35.90 3.85
307 308 1.811679 GCTGCGGCCTAACAGAGTC 60.812 63.158 18.40 0.88 35.90 3.36
308 309 2.266055 GCTGCGGCCTAACAGAGT 59.734 61.111 18.40 0.00 35.90 3.24
325 326 0.663153 GATTTGAGGGGCGAAATCGG 59.337 55.000 4.84 0.00 40.23 4.18
326 327 1.599542 GAGATTTGAGGGGCGAAATCG 59.400 52.381 0.00 0.00 41.50 3.34
327 328 2.615912 CAGAGATTTGAGGGGCGAAATC 59.384 50.000 0.00 0.00 38.38 2.17
328 329 2.239654 TCAGAGATTTGAGGGGCGAAAT 59.760 45.455 0.00 0.00 0.00 2.17
329 330 1.628340 TCAGAGATTTGAGGGGCGAAA 59.372 47.619 0.00 0.00 0.00 3.46
330 331 1.275666 TCAGAGATTTGAGGGGCGAA 58.724 50.000 0.00 0.00 0.00 4.70
331 332 1.500474 ATCAGAGATTTGAGGGGCGA 58.500 50.000 0.00 0.00 0.00 5.54
332 333 2.338577 AATCAGAGATTTGAGGGGCG 57.661 50.000 0.00 0.00 0.00 6.13
333 334 3.882288 GAGAAATCAGAGATTTGAGGGGC 59.118 47.826 9.49 0.00 0.00 5.80
334 335 5.108187 TGAGAAATCAGAGATTTGAGGGG 57.892 43.478 9.49 0.00 0.00 4.79
335 336 4.575645 GCTGAGAAATCAGAGATTTGAGGG 59.424 45.833 9.49 0.55 39.99 4.30
336 337 4.575645 GGCTGAGAAATCAGAGATTTGAGG 59.424 45.833 9.49 0.26 39.99 3.86
337 338 4.575645 GGGCTGAGAAATCAGAGATTTGAG 59.424 45.833 9.49 4.66 39.99 3.02
338 339 4.226846 AGGGCTGAGAAATCAGAGATTTGA 59.773 41.667 9.49 0.00 39.99 2.69
339 340 4.525024 AGGGCTGAGAAATCAGAGATTTG 58.475 43.478 9.49 0.00 39.99 2.32
340 341 4.858965 AGGGCTGAGAAATCAGAGATTT 57.141 40.909 9.38 4.77 39.99 2.17
341 342 4.858965 AAGGGCTGAGAAATCAGAGATT 57.141 40.909 9.38 0.00 39.99 2.40
342 343 5.012975 GGATAAGGGCTGAGAAATCAGAGAT 59.987 44.000 9.38 0.00 39.99 2.75
343 344 4.346418 GGATAAGGGCTGAGAAATCAGAGA 59.654 45.833 9.38 0.00 39.99 3.10
344 345 4.640364 GGATAAGGGCTGAGAAATCAGAG 58.360 47.826 9.38 0.00 39.99 3.35
345 346 3.070159 CGGATAAGGGCTGAGAAATCAGA 59.930 47.826 9.38 0.00 39.99 3.27
346 347 3.181461 ACGGATAAGGGCTGAGAAATCAG 60.181 47.826 0.83 0.83 40.51 2.90
347 348 2.771943 ACGGATAAGGGCTGAGAAATCA 59.228 45.455 0.00 0.00 0.00 2.57
348 349 3.134458 CACGGATAAGGGCTGAGAAATC 58.866 50.000 0.00 0.00 0.00 2.17
349 350 2.771943 TCACGGATAAGGGCTGAGAAAT 59.228 45.455 0.00 0.00 0.00 2.17
350 351 2.184533 TCACGGATAAGGGCTGAGAAA 58.815 47.619 0.00 0.00 0.00 2.52
351 352 1.860641 TCACGGATAAGGGCTGAGAA 58.139 50.000 0.00 0.00 0.00 2.87
352 353 2.088104 ATCACGGATAAGGGCTGAGA 57.912 50.000 0.00 0.00 0.00 3.27
353 354 5.394663 CCTTATATCACGGATAAGGGCTGAG 60.395 48.000 11.92 0.00 46.69 3.35
354 355 4.466370 CCTTATATCACGGATAAGGGCTGA 59.534 45.833 11.92 0.00 46.69 4.26
355 356 4.759782 CCTTATATCACGGATAAGGGCTG 58.240 47.826 11.92 0.00 46.69 4.85
360 361 4.081420 AGCAGCCCTTATATCACGGATAAG 60.081 45.833 0.00 0.00 36.86 1.73
361 362 3.838317 AGCAGCCCTTATATCACGGATAA 59.162 43.478 0.00 0.00 0.00 1.75
362 363 3.195610 CAGCAGCCCTTATATCACGGATA 59.804 47.826 0.00 0.00 0.00 2.59
363 364 2.027745 CAGCAGCCCTTATATCACGGAT 60.028 50.000 0.00 0.00 0.00 4.18
364 365 1.344438 CAGCAGCCCTTATATCACGGA 59.656 52.381 0.00 0.00 0.00 4.69
365 366 1.344438 TCAGCAGCCCTTATATCACGG 59.656 52.381 0.00 0.00 0.00 4.94
366 367 2.820059 TCAGCAGCCCTTATATCACG 57.180 50.000 0.00 0.00 0.00 4.35
367 368 5.980116 CGTATATCAGCAGCCCTTATATCAC 59.020 44.000 0.00 0.00 0.00 3.06
368 369 5.069119 CCGTATATCAGCAGCCCTTATATCA 59.931 44.000 0.00 0.00 0.00 2.15
369 370 5.509840 CCCGTATATCAGCAGCCCTTATATC 60.510 48.000 0.00 0.00 0.00 1.63
370 371 4.345257 CCCGTATATCAGCAGCCCTTATAT 59.655 45.833 0.00 0.00 0.00 0.86
371 372 3.704566 CCCGTATATCAGCAGCCCTTATA 59.295 47.826 0.00 0.00 0.00 0.98
372 373 2.501723 CCCGTATATCAGCAGCCCTTAT 59.498 50.000 0.00 0.00 0.00 1.73
373 374 1.899814 CCCGTATATCAGCAGCCCTTA 59.100 52.381 0.00 0.00 0.00 2.69
374 375 0.687354 CCCGTATATCAGCAGCCCTT 59.313 55.000 0.00 0.00 0.00 3.95
375 376 1.194781 CCCCGTATATCAGCAGCCCT 61.195 60.000 0.00 0.00 0.00 5.19
376 377 1.296715 CCCCGTATATCAGCAGCCC 59.703 63.158 0.00 0.00 0.00 5.19
377 378 1.376037 GCCCCGTATATCAGCAGCC 60.376 63.158 0.00 0.00 0.00 4.85
378 379 1.376037 GGCCCCGTATATCAGCAGC 60.376 63.158 0.00 0.00 0.00 5.25
379 380 0.036952 CAGGCCCCGTATATCAGCAG 60.037 60.000 0.00 0.00 0.00 4.24
380 381 2.057830 CAGGCCCCGTATATCAGCA 58.942 57.895 0.00 0.00 0.00 4.41
381 382 1.376037 GCAGGCCCCGTATATCAGC 60.376 63.158 0.00 0.00 0.00 4.26
382 383 1.478510 CTAGCAGGCCCCGTATATCAG 59.521 57.143 0.00 0.00 0.00 2.90
383 384 1.076513 TCTAGCAGGCCCCGTATATCA 59.923 52.381 0.00 0.00 0.00 2.15
384 385 1.751924 CTCTAGCAGGCCCCGTATATC 59.248 57.143 0.00 0.00 0.00 1.63
385 386 1.077334 ACTCTAGCAGGCCCCGTATAT 59.923 52.381 0.00 0.00 0.00 0.86
386 387 0.481567 ACTCTAGCAGGCCCCGTATA 59.518 55.000 0.00 0.00 0.00 1.47
387 388 1.115930 CACTCTAGCAGGCCCCGTAT 61.116 60.000 0.00 0.00 0.00 3.06
388 389 1.756950 CACTCTAGCAGGCCCCGTA 60.757 63.158 0.00 0.00 0.00 4.02
389 390 3.077556 CACTCTAGCAGGCCCCGT 61.078 66.667 0.00 0.00 0.00 5.28
390 391 3.854669 CCACTCTAGCAGGCCCCG 61.855 72.222 0.00 0.00 0.00 5.73
391 392 0.471971 TATCCACTCTAGCAGGCCCC 60.472 60.000 0.00 0.00 0.00 5.80
392 393 1.346068 CTTATCCACTCTAGCAGGCCC 59.654 57.143 0.00 0.00 0.00 5.80
393 394 1.346068 CCTTATCCACTCTAGCAGGCC 59.654 57.143 0.00 0.00 0.00 5.19
394 395 2.036604 GTCCTTATCCACTCTAGCAGGC 59.963 54.545 0.00 0.00 0.00 4.85
395 396 2.630580 GGTCCTTATCCACTCTAGCAGG 59.369 54.545 0.00 0.00 0.00 4.85
396 397 2.294791 CGGTCCTTATCCACTCTAGCAG 59.705 54.545 0.00 0.00 0.00 4.24
397 398 2.307768 CGGTCCTTATCCACTCTAGCA 58.692 52.381 0.00 0.00 0.00 3.49
398 399 1.000052 GCGGTCCTTATCCACTCTAGC 60.000 57.143 0.00 0.00 0.00 3.42
399 400 2.294791 CAGCGGTCCTTATCCACTCTAG 59.705 54.545 0.00 0.00 0.00 2.43
400 401 2.092049 TCAGCGGTCCTTATCCACTCTA 60.092 50.000 0.00 0.00 0.00 2.43
401 402 1.115467 CAGCGGTCCTTATCCACTCT 58.885 55.000 0.00 0.00 0.00 3.24
402 403 1.112113 TCAGCGGTCCTTATCCACTC 58.888 55.000 0.00 0.00 0.00 3.51
403 404 1.794714 ATCAGCGGTCCTTATCCACT 58.205 50.000 0.00 0.00 0.00 4.00
404 405 3.963428 ATATCAGCGGTCCTTATCCAC 57.037 47.619 0.00 0.00 0.00 4.02
405 406 3.442625 CGTATATCAGCGGTCCTTATCCA 59.557 47.826 0.00 0.00 0.00 3.41
406 407 3.181489 CCGTATATCAGCGGTCCTTATCC 60.181 52.174 5.45 0.00 42.73 2.59
407 408 3.181489 CCCGTATATCAGCGGTCCTTATC 60.181 52.174 10.89 0.00 45.91 1.75
408 409 2.758979 CCCGTATATCAGCGGTCCTTAT 59.241 50.000 10.89 0.00 45.91 1.73
409 410 2.165167 CCCGTATATCAGCGGTCCTTA 58.835 52.381 10.89 0.00 45.91 2.69
410 411 0.966920 CCCGTATATCAGCGGTCCTT 59.033 55.000 10.89 0.00 45.91 3.36
411 412 0.898789 CCCCGTATATCAGCGGTCCT 60.899 60.000 10.89 0.00 45.91 3.85
412 413 1.183676 ACCCCGTATATCAGCGGTCC 61.184 60.000 10.89 0.00 45.91 4.46
413 414 0.243095 GACCCCGTATATCAGCGGTC 59.757 60.000 10.89 5.77 45.91 4.79
414 415 0.178970 AGACCCCGTATATCAGCGGT 60.179 55.000 10.89 0.76 45.91 5.68
415 416 0.526662 GAGACCCCGTATATCAGCGG 59.473 60.000 6.38 6.38 46.80 5.52
416 417 0.526662 GGAGACCCCGTATATCAGCG 59.473 60.000 0.00 0.00 0.00 5.18
417 418 1.926108 AGGAGACCCCGTATATCAGC 58.074 55.000 0.00 0.00 40.87 4.26
418 419 4.225492 TCTCTAGGAGACCCCGTATATCAG 59.775 50.000 0.00 0.00 40.87 2.90
419 420 4.173594 TCTCTAGGAGACCCCGTATATCA 58.826 47.826 0.00 0.00 40.87 2.15
420 421 4.840716 TCTCTAGGAGACCCCGTATATC 57.159 50.000 0.00 0.00 40.87 1.63
421 422 5.493250 AGAATCTCTAGGAGACCCCGTATAT 59.507 44.000 0.00 0.00 41.76 0.86
422 423 4.850963 AGAATCTCTAGGAGACCCCGTATA 59.149 45.833 0.00 0.00 41.76 1.47
423 424 3.658705 AGAATCTCTAGGAGACCCCGTAT 59.341 47.826 0.00 0.00 41.76 3.06
424 425 3.054576 AGAATCTCTAGGAGACCCCGTA 58.945 50.000 0.00 0.00 41.76 4.02
425 426 1.854280 AGAATCTCTAGGAGACCCCGT 59.146 52.381 0.00 0.00 41.76 5.28
426 427 2.668144 AGAATCTCTAGGAGACCCCG 57.332 55.000 0.00 0.00 41.76 5.73
427 428 5.399113 ACATTAGAATCTCTAGGAGACCCC 58.601 45.833 0.00 0.00 41.76 4.95
428 429 7.672239 ACATACATTAGAATCTCTAGGAGACCC 59.328 40.741 0.00 0.00 41.76 4.46
429 430 8.644374 ACATACATTAGAATCTCTAGGAGACC 57.356 38.462 0.00 0.00 41.76 3.85
433 434 9.760926 AGCATACATACATTAGAATCTCTAGGA 57.239 33.333 0.00 0.00 29.56 2.94
437 438 8.474025 GCCTAGCATACATACATTAGAATCTCT 58.526 37.037 0.00 0.00 0.00 3.10
438 439 7.708752 GGCCTAGCATACATACATTAGAATCTC 59.291 40.741 0.00 0.00 0.00 2.75
439 440 7.401493 AGGCCTAGCATACATACATTAGAATCT 59.599 37.037 1.29 0.00 0.00 2.40
440 441 7.560368 AGGCCTAGCATACATACATTAGAATC 58.440 38.462 1.29 0.00 0.00 2.52
441 442 7.502060 AGGCCTAGCATACATACATTAGAAT 57.498 36.000 1.29 0.00 0.00 2.40
442 443 6.935240 AGGCCTAGCATACATACATTAGAA 57.065 37.500 1.29 0.00 0.00 2.10
443 444 6.350194 CGAAGGCCTAGCATACATACATTAGA 60.350 42.308 5.16 0.00 0.00 2.10
444 445 5.807520 CGAAGGCCTAGCATACATACATTAG 59.192 44.000 5.16 0.00 0.00 1.73
445 446 5.245301 ACGAAGGCCTAGCATACATACATTA 59.755 40.000 5.16 0.00 0.00 1.90
446 447 4.040461 ACGAAGGCCTAGCATACATACATT 59.960 41.667 5.16 0.00 0.00 2.71
447 448 3.578716 ACGAAGGCCTAGCATACATACAT 59.421 43.478 5.16 0.00 0.00 2.29
448 449 2.963101 ACGAAGGCCTAGCATACATACA 59.037 45.455 5.16 0.00 0.00 2.29
449 450 3.005472 TCACGAAGGCCTAGCATACATAC 59.995 47.826 5.16 0.00 0.00 2.39
450 451 3.227614 TCACGAAGGCCTAGCATACATA 58.772 45.455 5.16 0.00 0.00 2.29
467 468 3.363724 TGAGATCGACGTTCATTTTCACG 59.636 43.478 8.53 0.00 42.29 4.35
475 476 4.326278 GCATAAAGTTGAGATCGACGTTCA 59.674 41.667 8.53 2.61 34.56 3.18
477 478 4.242475 TGCATAAAGTTGAGATCGACGTT 58.758 39.130 6.62 6.62 36.27 3.99
543 548 1.750193 TGGCCACAGCTGTAAATAGC 58.250 50.000 21.20 16.39 44.01 2.97
570 575 2.270923 TCTTCAATCATTGTCGCTCGG 58.729 47.619 0.00 0.00 0.00 4.63
625 631 2.883730 GATCTGCGCGTGCCGTTA 60.884 61.111 19.87 0.00 41.78 3.18
628 634 3.307505 TTTTGATCTGCGCGTGCCG 62.308 57.895 19.87 12.89 41.78 5.69
629 635 1.797537 GTTTTGATCTGCGCGTGCC 60.798 57.895 19.87 2.92 41.78 5.01
630 636 0.442310 TAGTTTTGATCTGCGCGTGC 59.558 50.000 15.48 15.48 43.20 5.34
631 637 3.093574 CAATAGTTTTGATCTGCGCGTG 58.906 45.455 8.43 0.68 0.00 5.34
632 638 2.742053 ACAATAGTTTTGATCTGCGCGT 59.258 40.909 8.43 0.00 0.00 6.01
633 639 3.389687 ACAATAGTTTTGATCTGCGCG 57.610 42.857 0.00 0.00 0.00 6.86
634 640 5.228012 GCTTTACAATAGTTTTGATCTGCGC 59.772 40.000 0.00 0.00 0.00 6.09
635 641 6.314018 TGCTTTACAATAGTTTTGATCTGCG 58.686 36.000 0.00 0.00 0.00 5.18
636 642 6.749118 CCTGCTTTACAATAGTTTTGATCTGC 59.251 38.462 0.00 1.13 0.00 4.26
637 643 7.121168 TCCCTGCTTTACAATAGTTTTGATCTG 59.879 37.037 0.00 0.00 0.00 2.90
638 644 7.175104 TCCCTGCTTTACAATAGTTTTGATCT 58.825 34.615 0.00 0.00 0.00 2.75
639 645 7.391148 TCCCTGCTTTACAATAGTTTTGATC 57.609 36.000 0.00 0.00 0.00 2.92
640 646 7.232534 TGTTCCCTGCTTTACAATAGTTTTGAT 59.767 33.333 0.00 0.00 0.00 2.57
641 647 6.547880 TGTTCCCTGCTTTACAATAGTTTTGA 59.452 34.615 0.00 0.00 0.00 2.69
642 648 6.744112 TGTTCCCTGCTTTACAATAGTTTTG 58.256 36.000 0.00 0.00 0.00 2.44
643 649 6.969993 TGTTCCCTGCTTTACAATAGTTTT 57.030 33.333 0.00 0.00 0.00 2.43
644 650 6.719370 TCATGTTCCCTGCTTTACAATAGTTT 59.281 34.615 0.00 0.00 0.00 2.66
645 651 6.245408 TCATGTTCCCTGCTTTACAATAGTT 58.755 36.000 0.00 0.00 0.00 2.24
646 652 5.815581 TCATGTTCCCTGCTTTACAATAGT 58.184 37.500 0.00 0.00 0.00 2.12
647 653 5.297776 CCTCATGTTCCCTGCTTTACAATAG 59.702 44.000 0.00 0.00 0.00 1.73
648 654 5.192927 CCTCATGTTCCCTGCTTTACAATA 58.807 41.667 0.00 0.00 0.00 1.90
649 655 4.019174 CCTCATGTTCCCTGCTTTACAAT 58.981 43.478 0.00 0.00 0.00 2.71
650 656 3.420893 CCTCATGTTCCCTGCTTTACAA 58.579 45.455 0.00 0.00 0.00 2.41
666 672 7.259088 AGTAGTTTCATAACTCAACCCTCAT 57.741 36.000 0.00 0.00 43.45 2.90
673 679 5.105473 CGGAGGGAGTAGTTTCATAACTCAA 60.105 44.000 4.31 0.00 43.45 3.02
677 683 4.732672 ACGGAGGGAGTAGTTTCATAAC 57.267 45.455 0.00 0.00 34.36 1.89
682 688 3.922850 CGTTTAACGGAGGGAGTAGTTTC 59.077 47.826 9.88 0.00 38.08 2.78
689 695 0.531200 AGAGCGTTTAACGGAGGGAG 59.469 55.000 19.23 0.00 42.82 4.30
690 696 0.971386 AAGAGCGTTTAACGGAGGGA 59.029 50.000 19.23 0.00 42.82 4.20
691 697 2.660189 TAAGAGCGTTTAACGGAGGG 57.340 50.000 19.23 0.00 42.82 4.30
692 698 7.063074 CCATAATATAAGAGCGTTTAACGGAGG 59.937 40.741 19.23 0.00 42.82 4.30
693 699 7.063074 CCCATAATATAAGAGCGTTTAACGGAG 59.937 40.741 19.23 0.00 42.82 4.63
694 700 6.869913 CCCATAATATAAGAGCGTTTAACGGA 59.130 38.462 19.23 0.00 42.82 4.69
695 701 6.869913 TCCCATAATATAAGAGCGTTTAACGG 59.130 38.462 19.23 1.31 42.82 4.44
696 702 7.410087 CGTCCCATAATATAAGAGCGTTTAACG 60.410 40.741 13.57 13.57 45.88 3.18
697 703 7.148689 CCGTCCCATAATATAAGAGCGTTTAAC 60.149 40.741 0.00 0.00 0.00 2.01
698 704 6.869913 CCGTCCCATAATATAAGAGCGTTTAA 59.130 38.462 0.00 0.00 0.00 1.52
699 705 6.209192 TCCGTCCCATAATATAAGAGCGTTTA 59.791 38.462 0.00 0.00 0.00 2.01
700 706 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
701 707 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
702 708 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
703 709 4.398358 TCTCCGTCCCATAATATAAGAGCG 59.602 45.833 0.00 0.00 0.00 5.03
704 710 5.652891 TCTCTCCGTCCCATAATATAAGAGC 59.347 44.000 0.00 0.00 0.00 4.09
705 711 6.887545 ACTCTCTCCGTCCCATAATATAAGAG 59.112 42.308 0.00 0.00 33.36 2.85
706 712 6.659668 CACTCTCTCCGTCCCATAATATAAGA 59.340 42.308 0.00 0.00 0.00 2.10
707 713 6.127591 CCACTCTCTCCGTCCCATAATATAAG 60.128 46.154 0.00 0.00 0.00 1.73
708 714 5.715279 CCACTCTCTCCGTCCCATAATATAA 59.285 44.000 0.00 0.00 0.00 0.98
709 715 5.222275 ACCACTCTCTCCGTCCCATAATATA 60.222 44.000 0.00 0.00 0.00 0.86
710 716 4.090090 CCACTCTCTCCGTCCCATAATAT 58.910 47.826 0.00 0.00 0.00 1.28
711 717 3.117246 ACCACTCTCTCCGTCCCATAATA 60.117 47.826 0.00 0.00 0.00 0.98
712 718 2.320781 CCACTCTCTCCGTCCCATAAT 58.679 52.381 0.00 0.00 0.00 1.28
713 719 1.006758 ACCACTCTCTCCGTCCCATAA 59.993 52.381 0.00 0.00 0.00 1.90
714 720 0.629596 ACCACTCTCTCCGTCCCATA 59.370 55.000 0.00 0.00 0.00 2.74
715 721 0.629596 TACCACTCTCTCCGTCCCAT 59.370 55.000 0.00 0.00 0.00 4.00
716 722 0.406750 TTACCACTCTCTCCGTCCCA 59.593 55.000 0.00 0.00 0.00 4.37
717 723 1.553706 TTTACCACTCTCTCCGTCCC 58.446 55.000 0.00 0.00 0.00 4.46
718 724 3.006644 AGTTTTTACCACTCTCTCCGTCC 59.993 47.826 0.00 0.00 0.00 4.79
719 725 4.254402 AGTTTTTACCACTCTCTCCGTC 57.746 45.455 0.00 0.00 0.00 4.79
720 726 4.141779 ACAAGTTTTTACCACTCTCTCCGT 60.142 41.667 0.00 0.00 0.00 4.69
721 727 4.377897 ACAAGTTTTTACCACTCTCTCCG 58.622 43.478 0.00 0.00 0.00 4.63
722 728 7.981102 AATACAAGTTTTTACCACTCTCTCC 57.019 36.000 0.00 0.00 0.00 3.71
723 729 9.274206 AGAAATACAAGTTTTTACCACTCTCTC 57.726 33.333 0.00 0.00 0.00 3.20
724 730 9.057089 CAGAAATACAAGTTTTTACCACTCTCT 57.943 33.333 0.00 0.00 0.00 3.10
725 731 7.803659 GCAGAAATACAAGTTTTTACCACTCTC 59.196 37.037 0.00 0.00 0.00 3.20
726 732 7.502561 AGCAGAAATACAAGTTTTTACCACTCT 59.497 33.333 0.00 0.00 0.00 3.24
727 733 7.649057 AGCAGAAATACAAGTTTTTACCACTC 58.351 34.615 0.00 0.00 0.00 3.51
728 734 7.582667 AGCAGAAATACAAGTTTTTACCACT 57.417 32.000 0.00 0.00 0.00 4.00
729 735 9.394477 CTAAGCAGAAATACAAGTTTTTACCAC 57.606 33.333 0.00 0.00 0.00 4.16
730 736 9.127277 ACTAAGCAGAAATACAAGTTTTTACCA 57.873 29.630 0.00 0.00 0.00 3.25
731 737 9.961265 AACTAAGCAGAAATACAAGTTTTTACC 57.039 29.630 0.00 0.00 0.00 2.85
758 764 3.330405 TCACCCAGACCTTGATGAATTGA 59.670 43.478 0.00 0.00 0.00 2.57
759 765 3.689347 TCACCCAGACCTTGATGAATTG 58.311 45.455 0.00 0.00 0.00 2.32
760 766 4.043310 TCTTCACCCAGACCTTGATGAATT 59.957 41.667 0.00 0.00 0.00 2.17
765 772 3.652869 TCTTTCTTCACCCAGACCTTGAT 59.347 43.478 0.00 0.00 0.00 2.57
775 782 1.266989 CGCAAACCTCTTTCTTCACCC 59.733 52.381 0.00 0.00 0.00 4.61
776 783 2.218603 TCGCAAACCTCTTTCTTCACC 58.781 47.619 0.00 0.00 0.00 4.02
802 809 6.747414 TGCATGTATATAAACCTGAGGTCT 57.253 37.500 3.76 0.00 33.12 3.85
803 810 7.161404 TGATGCATGTATATAAACCTGAGGTC 58.839 38.462 3.76 0.00 33.12 3.85
906 1130 2.417516 CGGTATCCTGGCCTCACG 59.582 66.667 3.32 0.00 0.00 4.35
923 1148 3.056035 TCGACCTTTCTTTCTAGCTTCCC 60.056 47.826 0.00 0.00 0.00 3.97
1126 1360 0.542333 TTAAACCCCATCGGCGATGA 59.458 50.000 42.19 23.88 42.09 2.92
1128 1362 0.253610 TGTTAAACCCCATCGGCGAT 59.746 50.000 18.14 18.14 33.26 4.58
1131 1365 2.032426 CGTTATGTTAAACCCCATCGGC 59.968 50.000 0.00 0.00 33.26 5.54
1134 1368 3.440872 TGCACGTTATGTTAAACCCCATC 59.559 43.478 0.00 0.00 0.00 3.51
1135 1369 3.422796 TGCACGTTATGTTAAACCCCAT 58.577 40.909 0.00 0.00 0.00 4.00
1136 1370 2.860009 TGCACGTTATGTTAAACCCCA 58.140 42.857 0.00 0.00 0.00 4.96
1138 1372 4.223659 CTGTTGCACGTTATGTTAAACCC 58.776 43.478 0.00 0.00 0.00 4.11
1139 1373 3.666797 GCTGTTGCACGTTATGTTAAACC 59.333 43.478 0.00 0.00 39.41 3.27
1140 1374 4.283678 TGCTGTTGCACGTTATGTTAAAC 58.716 39.130 0.00 0.00 45.31 2.01
1141 1375 4.553756 TGCTGTTGCACGTTATGTTAAA 57.446 36.364 0.00 0.00 45.31 1.52
1165 1408 3.499918 CCTTCGATGCCAAATGGATAGTC 59.500 47.826 2.98 0.00 37.39 2.59
1167 1410 2.816087 CCCTTCGATGCCAAATGGATAG 59.184 50.000 2.98 0.00 37.39 2.08
1180 1423 0.464036 TGTTGCGCTATCCCTTCGAT 59.536 50.000 9.73 0.00 34.73 3.59
1183 1426 0.733150 GGTTGTTGCGCTATCCCTTC 59.267 55.000 9.73 0.00 0.00 3.46
1188 1431 1.026718 AGCCTGGTTGTTGCGCTATC 61.027 55.000 9.73 0.00 0.00 2.08
1190 1433 1.228124 AAGCCTGGTTGTTGCGCTA 60.228 52.632 9.73 0.00 0.00 4.26
1194 1437 1.576421 CTCGAAGCCTGGTTGTTGC 59.424 57.895 0.00 0.00 0.00 4.17
1196 1439 1.053424 TACCTCGAAGCCTGGTTGTT 58.947 50.000 0.00 0.00 35.48 2.83
1197 1440 1.053424 TTACCTCGAAGCCTGGTTGT 58.947 50.000 0.00 0.00 35.48 3.32
1232 1475 0.737219 GATCTGCAACATGGCCTCAC 59.263 55.000 3.32 0.00 0.00 3.51
1481 1724 1.134220 TGGAGCAGAAACTTTCACCGT 60.134 47.619 4.34 0.00 0.00 4.83
1490 1733 0.957888 GCAGGAGGTGGAGCAGAAAC 60.958 60.000 0.00 0.00 0.00 2.78
1501 1768 0.739561 GAGTATTCGTCGCAGGAGGT 59.260 55.000 0.00 0.00 0.00 3.85
1505 1772 1.299165 CCGGAGTATTCGTCGCAGG 60.299 63.158 0.00 0.00 32.93 4.85
1516 1783 2.048023 AATCGACGGTGCCGGAGTA 61.048 57.895 5.05 0.00 44.69 2.59
1517 1784 3.379445 AATCGACGGTGCCGGAGT 61.379 61.111 5.05 0.00 44.69 3.85
1629 1896 1.264749 AAGTGCCATCCTCGTAGCCA 61.265 55.000 0.00 0.00 0.00 4.75
1633 1900 1.136305 GCTACAAGTGCCATCCTCGTA 59.864 52.381 0.00 0.00 0.00 3.43
1635 1902 1.148157 CGCTACAAGTGCCATCCTCG 61.148 60.000 0.00 0.00 0.00 4.63
1705 1972 2.786539 TTCAGCGGTCTCTGCGCATT 62.787 55.000 12.24 0.00 37.44 3.56
1706 1973 2.786539 TTTCAGCGGTCTCTGCGCAT 62.787 55.000 12.24 0.00 37.44 4.73
1709 1976 1.080501 TCTTTCAGCGGTCTCTGCG 60.081 57.895 0.00 0.00 37.44 5.18
1710 1977 0.319900 TGTCTTTCAGCGGTCTCTGC 60.320 55.000 0.00 0.00 34.19 4.26
1716 1983 1.967319 ACAACATGTCTTTCAGCGGT 58.033 45.000 0.00 0.00 0.00 5.68
1745 2018 2.912295 TCCAAGATCATCCTGTGGTCAA 59.088 45.455 0.00 0.00 40.60 3.18
1836 2109 1.209128 CGTCAATACACCCGCTCATC 58.791 55.000 0.00 0.00 0.00 2.92
1916 2189 0.908910 ACCTACACATCCATCGGCAA 59.091 50.000 0.00 0.00 0.00 4.52
1965 2260 3.988379 TGTGAAACTGCAGGTGAAATC 57.012 42.857 19.93 6.43 38.04 2.17
2005 2300 4.104102 CCAGGCTATATTACAAGACCCCAA 59.896 45.833 0.00 0.00 0.00 4.12
2007 2302 3.651423 ACCAGGCTATATTACAAGACCCC 59.349 47.826 0.00 0.00 0.00 4.95
2008 2303 4.976540 ACCAGGCTATATTACAAGACCC 57.023 45.455 0.00 0.00 0.00 4.46
2253 2559 3.513912 TCGGCCTTCAATAGTTCTCTTCA 59.486 43.478 0.00 0.00 0.00 3.02
2255 2561 3.769844 TCTCGGCCTTCAATAGTTCTCTT 59.230 43.478 0.00 0.00 0.00 2.85
2281 2587 6.475727 AGTGATGAAACCGATTTATACTCGTG 59.524 38.462 3.88 0.00 34.36 4.35
2334 2640 7.011669 CGGTAGTTTACCCAGTGGTTTATAATG 59.988 40.741 8.74 0.00 44.75 1.90
2370 2676 7.550906 AGAATTTCTTATACTGCTGAACCTGAC 59.449 37.037 0.00 0.00 0.00 3.51
2460 2769 7.255104 GGCATTCATCGATATCTAAACCAACAA 60.255 37.037 0.00 0.00 0.00 2.83
2513 2822 2.158623 TGTTGTGGCAGAAGTCCTGAAT 60.159 45.455 0.00 0.00 45.78 2.57
2538 2847 5.283457 ACATGAGCAAGTATAACCTCCTC 57.717 43.478 0.00 0.00 0.00 3.71
2588 2897 2.549754 CACTGCAGTTTGTCCCTGTAAG 59.450 50.000 18.94 0.00 32.41 2.34
2590 2899 1.765904 TCACTGCAGTTTGTCCCTGTA 59.234 47.619 18.94 0.00 32.41 2.74
2607 2916 0.901124 AGATGGACTGAGTGCCTCAC 59.099 55.000 11.43 0.00 35.39 3.51
2649 2979 5.356882 TGCGTTTTGGTTGATCTTTCTAG 57.643 39.130 0.00 0.00 0.00 2.43
2670 3005 6.219473 TGTTAAGTACAATTTGGGCAACATG 58.781 36.000 0.78 0.00 32.92 3.21
2683 3018 8.722394 TGATATTGTGCGAAATGTTAAGTACAA 58.278 29.630 0.00 1.03 41.74 2.41
2781 3117 7.439381 AGCTTGCAAAATGATCTTATATTGGG 58.561 34.615 0.00 0.00 0.00 4.12
2813 3149 9.362539 CCCATAATATAAGATCATTTTGCAAGC 57.637 33.333 0.00 0.00 0.00 4.01
2821 3157 8.730948 CCCTCCATCCCATAATATAAGATCATT 58.269 37.037 0.00 0.00 0.00 2.57
2822 3158 8.082585 TCCCTCCATCCCATAATATAAGATCAT 58.917 37.037 0.00 0.00 0.00 2.45
2824 3160 7.570607 ACTCCCTCCATCCCATAATATAAGATC 59.429 40.741 0.00 0.00 0.00 2.75
2825 3161 7.442655 ACTCCCTCCATCCCATAATATAAGAT 58.557 38.462 0.00 0.00 0.00 2.40
2826 3162 6.826727 ACTCCCTCCATCCCATAATATAAGA 58.173 40.000 0.00 0.00 0.00 2.10
2827 3163 7.623677 TGTACTCCCTCCATCCCATAATATAAG 59.376 40.741 0.00 0.00 0.00 1.73
2828 3164 7.492552 TGTACTCCCTCCATCCCATAATATAA 58.507 38.462 0.00 0.00 0.00 0.98
2829 3165 7.063801 TGTACTCCCTCCATCCCATAATATA 57.936 40.000 0.00 0.00 0.00 0.86
2833 3169 3.717507 TGTACTCCCTCCATCCCATAA 57.282 47.619 0.00 0.00 0.00 1.90
2837 3173 1.807814 ACATGTACTCCCTCCATCCC 58.192 55.000 0.00 0.00 0.00 3.85
2838 3174 5.552178 GATTAACATGTACTCCCTCCATCC 58.448 45.833 0.00 0.00 0.00 3.51
2842 3178 3.640029 TCCGATTAACATGTACTCCCTCC 59.360 47.826 0.00 0.00 0.00 4.30
2844 3180 5.888982 ATTCCGATTAACATGTACTCCCT 57.111 39.130 0.00 0.00 0.00 4.20
2845 3181 8.617290 ATTAATTCCGATTAACATGTACTCCC 57.383 34.615 0.00 0.00 39.75 4.30
3104 3775 2.092212 CCAACTACCCCTTGCTCATCAT 60.092 50.000 0.00 0.00 0.00 2.45
3293 3975 0.820074 TGGCACCATCGAAAAACCGT 60.820 50.000 0.00 0.00 0.00 4.83
3301 3983 0.836606 ACATACCATGGCACCATCGA 59.163 50.000 13.04 0.00 33.90 3.59
3303 3985 2.620115 CAGAACATACCATGGCACCATC 59.380 50.000 13.04 5.48 33.90 3.51
3317 3999 5.489792 AACACTGTACTCCATCAGAACAT 57.510 39.130 0.00 0.00 35.84 2.71
3342 4025 9.952188 CTGAACTCTTATGAATTATCGTCTGTA 57.048 33.333 0.00 0.00 0.00 2.74
3345 4028 9.953697 GTACTGAACTCTTATGAATTATCGTCT 57.046 33.333 0.00 0.00 0.00 4.18
3346 4029 9.182933 GGTACTGAACTCTTATGAATTATCGTC 57.817 37.037 0.00 0.00 0.00 4.20
3374 4059 8.847196 AGATACTTTAACACTTTTTCTTGGGTC 58.153 33.333 0.00 0.00 0.00 4.46
3395 4080 2.108362 CCACCCCCGCGAAGATAC 59.892 66.667 8.23 0.00 0.00 2.24
3406 4091 0.470341 GTGAGCTCTATTCCCACCCC 59.530 60.000 16.19 0.00 0.00 4.95
3449 4134 5.917541 ATCACAAAATTTTGCAGCTGAAG 57.082 34.783 26.94 9.78 41.79 3.02
3450 4135 7.783090 TTTATCACAAAATTTTGCAGCTGAA 57.217 28.000 26.94 2.96 41.79 3.02
3451 4136 7.966246 ATTTATCACAAAATTTTGCAGCTGA 57.034 28.000 26.94 22.35 41.79 4.26
3504 4189 1.745087 CAATTTGGCATACACCGAGCT 59.255 47.619 0.00 0.00 0.00 4.09
3610 4295 9.074715 ACTAATATGGATCAGAGGGAGTAGATA 57.925 37.037 0.00 0.00 0.00 1.98
3677 4362 4.753107 ACGCACTTTATTCGAAGAAAAGGA 59.247 37.500 26.70 7.36 45.90 3.36
3698 4383 0.882042 GGAGCTCATGTGCCCATACG 60.882 60.000 17.19 0.00 0.00 3.06
3702 4387 0.178967 TTTTGGAGCTCATGTGCCCA 60.179 50.000 17.19 19.58 33.62 5.36
3723 4408 7.057264 TCATAAGAGCTGTATAGAGACACAGT 58.943 38.462 0.05 0.00 43.33 3.55
3830 4515 8.092687 GTGTTTGATACAGGTAACCTTCTCTTA 58.907 37.037 0.00 0.00 37.45 2.10
3831 4516 6.935208 GTGTTTGATACAGGTAACCTTCTCTT 59.065 38.462 0.00 0.00 37.45 2.85
3847 4532 5.505780 CCATTAGGGAAGGTGTGTTTGATA 58.494 41.667 0.00 0.00 40.01 2.15
3997 4682 2.036604 TCTTCGTTCTGCATGTACCACA 59.963 45.455 0.00 0.00 0.00 4.17
4986 5671 1.061570 GCTGCGCAACTGCATAGAC 59.938 57.895 13.05 0.00 45.26 2.59
5033 5718 1.737838 TCATGATGGGTCGTTCTTGC 58.262 50.000 0.00 0.00 0.00 4.01
5100 5785 5.482908 TCTTCTCATAGTTTGCTCCTTGTC 58.517 41.667 0.00 0.00 0.00 3.18
5191 5876 3.620966 GCTTCCTTCTGAATAGTGCAGGT 60.621 47.826 0.00 0.00 34.20 4.00
5213 5898 1.162698 CCTCCATGCTCAACTGTGTG 58.837 55.000 0.00 0.00 0.00 3.82
5324 6013 9.547753 GCTATTTTACATGATTCTCCAGAACTA 57.452 33.333 0.00 0.00 36.80 2.24
5325 6014 8.270744 AGCTATTTTACATGATTCTCCAGAACT 58.729 33.333 0.00 0.00 36.80 3.01
5329 6018 7.930325 TCTGAGCTATTTTACATGATTCTCCAG 59.070 37.037 0.00 0.00 0.00 3.86
5418 6107 2.711009 AGAACTGGATCTGAACCCACAA 59.289 45.455 1.16 0.00 0.00 3.33
5499 6188 1.338136 ATTCCCTACTCAGCACCCGG 61.338 60.000 0.00 0.00 0.00 5.73
5537 6226 5.465390 CCGATTAACTCATTTATCAGCCGAA 59.535 40.000 0.00 0.00 0.00 4.30
5542 6231 8.376203 CGAATAGCCGATTAACTCATTTATCAG 58.624 37.037 0.00 0.00 0.00 2.90
5581 6270 5.449177 GGCATCTTGGTCTGTTAATTGCTAC 60.449 44.000 0.00 0.00 0.00 3.58
5582 6271 4.640201 GGCATCTTGGTCTGTTAATTGCTA 59.360 41.667 0.00 0.00 0.00 3.49
5583 6272 3.445096 GGCATCTTGGTCTGTTAATTGCT 59.555 43.478 0.00 0.00 0.00 3.91
5584 6273 3.731867 CGGCATCTTGGTCTGTTAATTGC 60.732 47.826 0.00 0.00 0.00 3.56
5585 6274 3.689161 TCGGCATCTTGGTCTGTTAATTG 59.311 43.478 0.00 0.00 0.00 2.32
5586 6275 3.950397 TCGGCATCTTGGTCTGTTAATT 58.050 40.909 0.00 0.00 0.00 1.40
5587 6276 3.627395 TCGGCATCTTGGTCTGTTAAT 57.373 42.857 0.00 0.00 0.00 1.40
5613 6302 6.446781 AGGAACAAATGTGAATATCAGCTG 57.553 37.500 7.63 7.63 0.00 4.24
5684 6374 1.527736 TGGTTTTGCATACACGTCGAC 59.472 47.619 5.18 5.18 0.00 4.20
5690 6380 1.917872 TCCCCTGGTTTTGCATACAC 58.082 50.000 0.00 0.00 0.00 2.90
5747 6438 0.475906 CCTAATCCTGAGGGGCCAAG 59.524 60.000 4.39 0.00 34.39 3.61
5923 7909 6.035758 CAGTGATCTGTATGTGTGACAATCAG 59.964 42.308 0.00 0.00 36.97 2.90
6005 7991 7.108841 ACTTTCATCTAGTACGATTTAGGCA 57.891 36.000 0.00 0.00 0.00 4.75
6156 8478 1.542915 GGGTGAGTCGCTTGTACTGTA 59.457 52.381 3.25 0.00 0.00 2.74
6157 8479 0.317479 GGGTGAGTCGCTTGTACTGT 59.683 55.000 3.25 0.00 0.00 3.55
6158 8480 0.603569 AGGGTGAGTCGCTTGTACTG 59.396 55.000 3.25 0.00 35.80 2.74
6159 8481 0.603569 CAGGGTGAGTCGCTTGTACT 59.396 55.000 3.25 0.00 37.22 2.73
6160 8482 0.389948 CCAGGGTGAGTCGCTTGTAC 60.390 60.000 3.25 0.00 37.22 2.90
6230 8552 5.073280 GGGGCTACAACCTAGGATCTTTATT 59.927 44.000 17.98 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.