Multiple sequence alignment - TraesCS2D01G440500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G440500 chr2D 100.000 7917 0 0 1 7917 550629472 550637388 0.000000e+00 14621.0
1 TraesCS2D01G440500 chr2D 88.027 451 42 10 1 444 187524363 187524808 2.530000e-144 523.0
2 TraesCS2D01G440500 chr2D 99.303 287 2 0 7473 7759 628163904 628164190 3.270000e-143 520.0
3 TraesCS2D01G440500 chr2D 98.288 292 4 1 7473 7763 444042691 444042982 1.970000e-140 510.0
4 TraesCS2D01G440500 chr2D 97.315 298 7 1 7465 7761 89336644 89336347 9.170000e-139 505.0
5 TraesCS2D01G440500 chr2B 94.051 3732 118 41 651 4330 656255953 656252274 0.000000e+00 5566.0
6 TraesCS2D01G440500 chr2B 84.552 1217 150 20 2326 3520 685385938 685384738 0.000000e+00 1171.0
7 TraesCS2D01G440500 chr2B 90.842 819 28 16 6631 7403 656252158 656251341 0.000000e+00 1053.0
8 TraesCS2D01G440500 chr2A 96.198 1815 40 11 5670 7473 692057003 692058799 0.000000e+00 2942.0
9 TraesCS2D01G440500 chr2A 96.774 1364 19 8 4321 5683 692042694 692044033 0.000000e+00 2252.0
10 TraesCS2D01G440500 chr2A 95.786 1329 25 9 2200 3510 692039696 692041011 0.000000e+00 2115.0
11 TraesCS2D01G440500 chr2A 94.635 1286 23 9 915 2191 692037859 692039107 0.000000e+00 1951.0
12 TraesCS2D01G440500 chr2A 97.839 833 14 4 3499 4330 692041845 692042674 0.000000e+00 1435.0
13 TraesCS2D01G440500 chr2A 87.136 583 59 7 3 571 692036907 692037487 0.000000e+00 647.0
14 TraesCS2D01G440500 chr2A 83.920 398 44 7 2223 2608 710458952 710458563 5.840000e-96 363.0
15 TraesCS2D01G440500 chr2A 87.797 295 13 5 572 865 692037590 692037862 2.760000e-84 324.0
16 TraesCS2D01G440500 chr2A 90.798 163 15 0 979 1141 710459628 710459466 1.340000e-52 219.0
17 TraesCS2D01G440500 chr2A 94.017 117 5 2 7759 7873 692058797 692058913 8.170000e-40 176.0
18 TraesCS2D01G440500 chr2A 94.828 58 3 0 7378 7435 692058876 692058819 3.040000e-14 91.6
19 TraesCS2D01G440500 chr2A 97.436 39 1 0 3867 3905 692042126 692042164 5.130000e-07 67.6
20 TraesCS2D01G440500 chr7B 94.957 575 25 2 1081 1651 669610393 669609819 0.000000e+00 898.0
21 TraesCS2D01G440500 chr6A 91.769 571 22 5 1083 1649 47594595 47594046 0.000000e+00 771.0
22 TraesCS2D01G440500 chr6A 92.830 530 30 2 1050 1579 291913733 291914254 0.000000e+00 761.0
23 TraesCS2D01G440500 chr7A 96.205 448 16 1 1081 1528 728274035 728274481 0.000000e+00 732.0
24 TraesCS2D01G440500 chr7A 93.860 342 17 2 1312 1649 79522109 79522450 5.480000e-141 512.0
25 TraesCS2D01G440500 chr7A 96.000 175 7 0 1081 1255 79521913 79522087 1.300000e-72 285.0
26 TraesCS2D01G440500 chr5B 95.089 448 17 2 1081 1528 62544227 62544669 0.000000e+00 701.0
27 TraesCS2D01G440500 chr1D 89.438 445 36 7 1 434 18429919 18430363 1.160000e-152 551.0
28 TraesCS2D01G440500 chr1D 98.276 290 5 0 7471 7760 31198982 31199271 7.090000e-140 508.0
29 TraesCS2D01G440500 chr3A 88.914 451 37 9 5 443 319953672 319954121 1.940000e-150 544.0
30 TraesCS2D01G440500 chrUn 88.571 455 40 7 1 443 119815732 119816186 6.990000e-150 542.0
31 TraesCS2D01G440500 chrUn 98.282 291 5 0 7471 7761 360170888 360170598 1.970000e-140 510.0
32 TraesCS2D01G440500 chrUn 93.851 309 15 2 1347 1651 36456648 36456340 5.600000e-126 462.0
33 TraesCS2D01G440500 chr6B 88.616 448 45 4 1 443 216699107 216699553 2.510000e-149 540.0
34 TraesCS2D01G440500 chr5D 87.965 457 41 6 1 444 511821649 511822104 1.960000e-145 527.0
35 TraesCS2D01G440500 chr5D 91.489 94 8 0 1032 1125 251426961 251426868 6.450000e-26 130.0
36 TraesCS2D01G440500 chr5D 91.209 91 8 0 1035 1125 251312201 251312111 3.000000e-24 124.0
37 TraesCS2D01G440500 chr4D 98.976 293 3 0 7469 7761 509132637 509132929 7.040000e-145 525.0
38 TraesCS2D01G440500 chr4B 88.053 452 40 7 5 444 80001172 80001621 2.530000e-144 523.0
39 TraesCS2D01G440500 chr4A 87.556 450 50 5 1 445 86929653 86929205 4.240000e-142 516.0
40 TraesCS2D01G440500 chr4A 97.222 36 0 1 6655 6689 28995150 28995115 8.580000e-05 60.2
41 TraesCS2D01G440500 chr3D 98.625 291 4 0 7471 7761 571970902 571971192 4.240000e-142 516.0
42 TraesCS2D01G440500 chr3D 97.938 291 6 0 7471 7761 240482527 240482817 9.170000e-139 505.0
43 TraesCS2D01G440500 chr3D 94.190 327 14 5 7467 7789 355275941 355275616 1.980000e-135 494.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G440500 chr2D 550629472 550637388 7916 False 14621.000000 14621 100.000000 1 7917 1 chr2D.!!$F3 7916
1 TraesCS2D01G440500 chr2B 656251341 656255953 4612 True 3309.500000 5566 92.446500 651 7403 2 chr2B.!!$R2 6752
2 TraesCS2D01G440500 chr2B 685384738 685385938 1200 True 1171.000000 1171 84.552000 2326 3520 1 chr2B.!!$R1 1194
3 TraesCS2D01G440500 chr2A 692057003 692058913 1910 False 1559.000000 2942 95.107500 5670 7873 2 chr2A.!!$F2 2203
4 TraesCS2D01G440500 chr2A 692036907 692044033 7126 False 1255.942857 2252 93.914714 3 5683 7 chr2A.!!$F1 5680
5 TraesCS2D01G440500 chr2A 710458563 710459628 1065 True 291.000000 363 87.359000 979 2608 2 chr2A.!!$R2 1629
6 TraesCS2D01G440500 chr7B 669609819 669610393 574 True 898.000000 898 94.957000 1081 1651 1 chr7B.!!$R1 570
7 TraesCS2D01G440500 chr6A 47594046 47594595 549 True 771.000000 771 91.769000 1083 1649 1 chr6A.!!$R1 566
8 TraesCS2D01G440500 chr6A 291913733 291914254 521 False 761.000000 761 92.830000 1050 1579 1 chr6A.!!$F1 529
9 TraesCS2D01G440500 chr7A 79521913 79522450 537 False 398.500000 512 94.930000 1081 1649 2 chr7A.!!$F2 568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
472 479 0.033208 TGGGATGGATTTGGGTGAGC 60.033 55.000 0.00 0.00 0.00 4.26 F
869 1007 0.459585 CCCACGGATATAATCGCCCG 60.460 60.000 0.00 0.00 46.65 6.13 F
910 1048 2.162408 CCCTTCGTCCTCAAAATTCTGC 59.838 50.000 0.00 0.00 0.00 4.26 F
911 1049 3.077359 CCTTCGTCCTCAAAATTCTGCT 58.923 45.455 0.00 0.00 0.00 4.24 F
2290 3361 3.214328 TGTTGCTTTTCTCTTCCTGACC 58.786 45.455 0.00 0.00 0.00 4.02 F
2462 3533 2.037121 TGAAGCGGAACTGACTCAATCA 59.963 45.455 0.00 0.00 35.45 2.57 F
2753 3841 2.094675 GTTACTACAGTGCCCCGAGTA 58.905 52.381 0.00 0.00 0.00 2.59 F
3447 4540 2.949451 ACGCGAGTCAAGATGATCTT 57.051 45.000 15.93 0.97 44.19 2.40 F
4963 6945 1.455217 TGCCCGGTAGCTAGAGTCC 60.455 63.158 0.00 0.00 0.00 3.85 F
5762 7745 1.410153 TGCAGATGCTCTATTCTCGCA 59.590 47.619 6.35 0.00 42.66 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1654 1878 1.689273 CTATGTCCAGGACAGCCCTAC 59.311 57.143 26.56 0.00 46.04 3.18 R
2290 3361 2.866762 GCCTTAATTAGTGACTCTGCCG 59.133 50.000 0.00 0.00 0.00 5.69 R
2301 3372 4.137543 AGCCATTCCTTCGCCTTAATTAG 58.862 43.478 0.00 0.00 0.00 1.73 R
2462 3533 5.163237 TGTGAAGTTACCTTTGTTAGAGGCT 60.163 40.000 0.00 0.00 37.84 4.58 R
3447 4540 3.576078 TCCTTGCAGAAAAGTTGAGGA 57.424 42.857 0.00 0.00 0.00 3.71 R
3701 5641 5.537300 AGTCGGTGTGATAAGAGCAATAT 57.463 39.130 0.00 0.00 0.00 1.28 R
4652 6634 1.803334 TTAGGACGACCAATGTGCAC 58.197 50.000 10.75 10.75 38.94 4.57 R
4970 6952 2.419673 TCGGCAAGTGCATACTGAATTG 59.580 45.455 5.52 0.00 44.36 2.32 R
6825 8809 0.951558 CCGGTACATAAGCATTGCCC 59.048 55.000 4.70 0.00 0.00 5.36 R
7655 9687 0.103390 GAGAGAAGGTAAGCGGGCTC 59.897 60.000 0.00 0.00 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.203294 AAGTGGGGGCGACAACAC 60.203 61.111 6.46 6.46 38.37 3.32
46 47 5.473066 ACACTGGAGGATTTCATTTTTGG 57.527 39.130 0.00 0.00 0.00 3.28
54 55 3.996363 GGATTTCATTTTTGGTGGTGCTC 59.004 43.478 0.00 0.00 0.00 4.26
80 81 2.487762 GGTGCCGAGTCATGATTTTCAA 59.512 45.455 0.00 0.00 0.00 2.69
101 103 2.561478 GTGAAACCTAAGGTCTGGCA 57.439 50.000 0.00 0.00 33.12 4.92
109 111 3.010584 ACCTAAGGTCTGGCATTCATTGT 59.989 43.478 0.00 0.00 0.00 2.71
115 117 2.733026 GTCTGGCATTCATTGTTTGTGC 59.267 45.455 0.00 0.00 35.17 4.57
151 153 7.141363 CCTTGTTGAAGGTATTGTTTTGAGAG 58.859 38.462 0.00 0.00 43.63 3.20
153 155 5.827797 TGTTGAAGGTATTGTTTTGAGAGCT 59.172 36.000 0.00 0.00 0.00 4.09
164 166 3.305398 TTTGAGAGCTCGGTCTTTCTC 57.695 47.619 8.37 0.00 37.24 2.87
166 168 1.178276 GAGAGCTCGGTCTTTCTCCA 58.822 55.000 8.37 0.00 31.95 3.86
181 183 4.301072 TTCTCCAGGGTGAAAACCTATG 57.699 45.455 0.56 0.00 36.32 2.23
184 186 4.540099 TCTCCAGGGTGAAAACCTATGATT 59.460 41.667 0.00 0.00 36.32 2.57
194 196 6.094881 GTGAAAACCTATGATTTTGGATCGGA 59.905 38.462 0.00 0.00 29.44 4.55
199 201 2.753055 TGATTTTGGATCGGACGACA 57.247 45.000 0.00 0.00 0.00 4.35
233 235 2.951642 CACTGTTTCCTTCTTGAAGGCA 59.048 45.455 21.16 10.60 39.80 4.75
252 254 2.414691 GCATCGCTTTTGGAGACCTTTC 60.415 50.000 0.00 0.00 0.00 2.62
259 261 4.984785 GCTTTTGGAGACCTTTCATGTTTC 59.015 41.667 0.00 0.00 0.00 2.78
261 263 3.154827 TGGAGACCTTTCATGTTTCCC 57.845 47.619 0.00 0.00 36.44 3.97
276 278 0.547075 TTCCCGGGTGTTGTCTTTGA 59.453 50.000 22.86 0.00 0.00 2.69
290 292 3.181464 TGTCTTTGATGGTGGTTCGTGTA 60.181 43.478 0.00 0.00 0.00 2.90
294 296 1.076332 GATGGTGGTTCGTGTACTGC 58.924 55.000 0.00 0.00 0.00 4.40
323 325 1.354040 GAGTTGATCACTGTGGCGAG 58.646 55.000 8.11 0.00 35.01 5.03
326 328 0.037326 TTGATCACTGTGGCGAGGTC 60.037 55.000 8.11 0.00 0.00 3.85
365 367 1.881973 TCTTTTCAGGCTGTGTGCATC 59.118 47.619 15.27 0.00 45.15 3.91
366 368 1.884579 CTTTTCAGGCTGTGTGCATCT 59.115 47.619 15.27 0.00 45.15 2.90
368 370 1.241165 TTCAGGCTGTGTGCATCTTG 58.759 50.000 15.27 0.00 45.15 3.02
369 371 0.607217 TCAGGCTGTGTGCATCTTGG 60.607 55.000 15.27 0.00 45.15 3.61
385 387 5.696822 CATCTTGGATGTCTTTGTGACTTG 58.303 41.667 0.00 0.00 45.54 3.16
389 391 3.631686 TGGATGTCTTTGTGACTTGTTGG 59.368 43.478 0.00 0.00 45.54 3.77
392 394 2.163412 TGTCTTTGTGACTTGTTGGTGC 59.837 45.455 0.00 0.00 45.54 5.01
393 395 2.163412 GTCTTTGTGACTTGTTGGTGCA 59.837 45.455 0.00 0.00 42.21 4.57
395 397 2.121291 TTGTGACTTGTTGGTGCAGA 57.879 45.000 0.00 0.00 0.00 4.26
396 398 1.667236 TGTGACTTGTTGGTGCAGAG 58.333 50.000 0.00 0.00 0.00 3.35
397 399 1.209261 TGTGACTTGTTGGTGCAGAGA 59.791 47.619 0.00 0.00 0.00 3.10
398 400 1.599542 GTGACTTGTTGGTGCAGAGAC 59.400 52.381 0.00 0.00 0.00 3.36
399 401 1.486310 TGACTTGTTGGTGCAGAGACT 59.514 47.619 0.00 0.00 0.00 3.24
404 411 0.940126 GTTGGTGCAGAGACTGTGTG 59.060 55.000 1.08 0.00 33.43 3.82
410 417 3.187227 GGTGCAGAGACTGTGTGTAATTG 59.813 47.826 1.08 0.00 33.43 2.32
411 418 3.187227 GTGCAGAGACTGTGTGTAATTGG 59.813 47.826 1.08 0.00 33.43 3.16
419 426 6.100004 AGACTGTGTGTAATTGGTATCTTCG 58.900 40.000 0.00 0.00 0.00 3.79
422 429 3.861113 GTGTGTAATTGGTATCTTCGCGA 59.139 43.478 3.71 3.71 0.00 5.87
460 467 6.237901 TCCTTTTCGTTCATATATGGGATGG 58.762 40.000 12.78 9.94 0.00 3.51
472 479 0.033208 TGGGATGGATTTGGGTGAGC 60.033 55.000 0.00 0.00 0.00 4.26
484 491 0.674534 GGGTGAGCCGGACTGTATAG 59.325 60.000 5.05 0.00 34.97 1.31
490 497 0.743097 GCCGGACTGTATAGACGGTT 59.257 55.000 21.00 0.00 45.60 4.44
500 507 7.977853 GGACTGTATAGACGGTTGAATTTTAGA 59.022 37.037 2.97 0.00 45.60 2.10
508 515 3.181506 CGGTTGAATTTTAGAGAGCCTGC 60.182 47.826 0.00 0.00 0.00 4.85
513 520 2.479566 TTTTAGAGAGCCTGCTGGTG 57.520 50.000 11.69 0.00 35.27 4.17
525 533 2.690778 GCTGGTGCCCGTTGATGTC 61.691 63.158 0.00 0.00 0.00 3.06
528 536 3.124921 GTGCCCGTTGATGTCCGG 61.125 66.667 0.00 0.00 43.82 5.14
555 570 5.122396 CCTCCCAACAGAGAAATAAACTTCG 59.878 44.000 0.00 0.00 35.82 3.79
619 735 2.362736 CATGCATTATAGCCCGAGCAT 58.637 47.619 0.00 0.00 42.82 3.79
649 765 5.109210 GGTTTGCTCAGTTTTAAGTGCTTT 58.891 37.500 0.00 0.00 0.00 3.51
681 797 1.334556 ACGTTAAACCGGGCTGAAAAC 59.665 47.619 6.32 0.30 0.00 2.43
700 816 3.547054 ACAAGACAACGGTCCAACTTA 57.453 42.857 0.00 0.00 45.48 2.24
702 818 4.263435 ACAAGACAACGGTCCAACTTAAA 58.737 39.130 0.00 0.00 45.48 1.52
703 819 4.701171 ACAAGACAACGGTCCAACTTAAAA 59.299 37.500 0.00 0.00 45.48 1.52
704 820 5.183522 ACAAGACAACGGTCCAACTTAAAAA 59.816 36.000 0.00 0.00 45.48 1.94
862 1000 2.701951 GTTCTGGGTCCCACGGATATAA 59.298 50.000 6.47 0.00 32.73 0.98
863 1001 3.269592 TCTGGGTCCCACGGATATAAT 57.730 47.619 6.47 0.00 32.73 1.28
864 1002 3.170717 TCTGGGTCCCACGGATATAATC 58.829 50.000 6.47 0.00 32.73 1.75
865 1003 1.897133 TGGGTCCCACGGATATAATCG 59.103 52.381 6.47 0.00 32.73 3.34
866 1004 1.405121 GGGTCCCACGGATATAATCGC 60.405 57.143 1.78 0.00 32.73 4.58
867 1005 1.405121 GGTCCCACGGATATAATCGCC 60.405 57.143 0.00 0.00 32.73 5.54
868 1006 0.899720 TCCCACGGATATAATCGCCC 59.100 55.000 0.00 0.00 0.00 6.13
869 1007 0.459585 CCCACGGATATAATCGCCCG 60.460 60.000 0.00 0.00 46.65 6.13
890 1028 9.837525 CGCCCGTATATATATTAGTATTTCTCC 57.162 37.037 0.00 0.00 0.00 3.71
899 1037 9.771140 ATATATTAGTATTTCTCCCTTCGTCCT 57.229 33.333 0.00 0.00 0.00 3.85
900 1038 5.848833 TTAGTATTTCTCCCTTCGTCCTC 57.151 43.478 0.00 0.00 0.00 3.71
901 1039 3.709587 AGTATTTCTCCCTTCGTCCTCA 58.290 45.455 0.00 0.00 0.00 3.86
902 1040 4.094476 AGTATTTCTCCCTTCGTCCTCAA 58.906 43.478 0.00 0.00 0.00 3.02
903 1041 4.530946 AGTATTTCTCCCTTCGTCCTCAAA 59.469 41.667 0.00 0.00 0.00 2.69
904 1042 3.849563 TTTCTCCCTTCGTCCTCAAAA 57.150 42.857 0.00 0.00 0.00 2.44
905 1043 4.367039 TTTCTCCCTTCGTCCTCAAAAT 57.633 40.909 0.00 0.00 0.00 1.82
906 1044 4.367039 TTCTCCCTTCGTCCTCAAAATT 57.633 40.909 0.00 0.00 0.00 1.82
907 1045 3.939066 TCTCCCTTCGTCCTCAAAATTC 58.061 45.455 0.00 0.00 0.00 2.17
908 1046 3.583086 TCTCCCTTCGTCCTCAAAATTCT 59.417 43.478 0.00 0.00 0.00 2.40
909 1047 3.674997 TCCCTTCGTCCTCAAAATTCTG 58.325 45.455 0.00 0.00 0.00 3.02
910 1048 2.162408 CCCTTCGTCCTCAAAATTCTGC 59.838 50.000 0.00 0.00 0.00 4.26
911 1049 3.077359 CCTTCGTCCTCAAAATTCTGCT 58.923 45.455 0.00 0.00 0.00 4.24
912 1050 3.503748 CCTTCGTCCTCAAAATTCTGCTT 59.496 43.478 0.00 0.00 0.00 3.91
913 1051 4.378874 CCTTCGTCCTCAAAATTCTGCTTC 60.379 45.833 0.00 0.00 0.00 3.86
914 1052 3.738982 TCGTCCTCAAAATTCTGCTTCA 58.261 40.909 0.00 0.00 0.00 3.02
918 1056 5.405797 GTCCTCAAAATTCTGCTTCAATCC 58.594 41.667 0.00 0.00 0.00 3.01
921 1059 4.158786 TCAAAATTCTGCTTCAATCCCCA 58.841 39.130 0.00 0.00 0.00 4.96
1654 1878 4.928944 TCGTTGCGTTGCGTTGCG 62.929 61.111 0.00 0.00 0.00 4.85
1878 2112 4.260170 GCTCTGTTTGATCACCTCTCATT 58.740 43.478 0.00 0.00 0.00 2.57
1879 2113 4.332268 GCTCTGTTTGATCACCTCTCATTC 59.668 45.833 0.00 0.00 0.00 2.67
1880 2114 5.732633 CTCTGTTTGATCACCTCTCATTCT 58.267 41.667 0.00 0.00 0.00 2.40
1881 2115 5.728471 TCTGTTTGATCACCTCTCATTCTC 58.272 41.667 0.00 0.00 0.00 2.87
1882 2116 5.246883 TCTGTTTGATCACCTCTCATTCTCA 59.753 40.000 0.00 0.00 0.00 3.27
1883 2117 6.058553 TGTTTGATCACCTCTCATTCTCAT 57.941 37.500 0.00 0.00 0.00 2.90
1884 2118 7.124750 TCTGTTTGATCACCTCTCATTCTCATA 59.875 37.037 0.00 0.00 0.00 2.15
1885 2119 7.799081 TGTTTGATCACCTCTCATTCTCATAT 58.201 34.615 0.00 0.00 0.00 1.78
2000 2236 7.606073 AGGCTTTATCTTGAGAAGAAGAAGAAC 59.394 37.037 12.57 7.22 41.63 3.01
2289 3360 4.900635 TTGTTGCTTTTCTCTTCCTGAC 57.099 40.909 0.00 0.00 0.00 3.51
2290 3361 3.214328 TGTTGCTTTTCTCTTCCTGACC 58.786 45.455 0.00 0.00 0.00 4.02
2360 3431 9.750882 GTTGGTACGTAAAACTTCTCATTTATC 57.249 33.333 12.79 0.00 0.00 1.75
2462 3533 2.037121 TGAAGCGGAACTGACTCAATCA 59.963 45.455 0.00 0.00 35.45 2.57
2753 3841 2.094675 GTTACTACAGTGCCCCGAGTA 58.905 52.381 0.00 0.00 0.00 2.59
3020 4109 4.644234 CAGTACCATTGGTCCATGCAATTA 59.356 41.667 12.68 0.00 37.09 1.40
3021 4110 5.126869 CAGTACCATTGGTCCATGCAATTAA 59.873 40.000 12.68 0.00 37.09 1.40
3022 4111 5.898972 AGTACCATTGGTCCATGCAATTAAT 59.101 36.000 12.68 0.00 37.09 1.40
3023 4112 5.280654 ACCATTGGTCCATGCAATTAATC 57.719 39.130 1.37 0.00 0.00 1.75
3024 4113 4.101430 ACCATTGGTCCATGCAATTAATCC 59.899 41.667 1.37 0.00 0.00 3.01
3025 4114 4.101274 CCATTGGTCCATGCAATTAATCCA 59.899 41.667 0.00 0.00 0.00 3.41
3026 4115 5.221762 CCATTGGTCCATGCAATTAATCCAT 60.222 40.000 0.00 0.00 0.00 3.41
3027 4116 6.014413 CCATTGGTCCATGCAATTAATCCATA 60.014 38.462 0.00 0.00 0.00 2.74
3028 4117 7.310796 CCATTGGTCCATGCAATTAATCCATAT 60.311 37.037 0.00 0.00 0.00 1.78
3029 4118 6.593268 TGGTCCATGCAATTAATCCATATG 57.407 37.500 0.00 0.00 0.00 1.78
3030 4119 6.313324 TGGTCCATGCAATTAATCCATATGA 58.687 36.000 3.65 0.00 0.00 2.15
3045 4134 8.842358 AATCCATATGAAATCCATGAAATTGC 57.158 30.769 3.65 0.00 36.71 3.56
3447 4540 2.949451 ACGCGAGTCAAGATGATCTT 57.051 45.000 15.93 0.97 44.19 2.40
4491 6473 4.038282 TGTGCTTTCATGAGTCTTGCATTT 59.962 37.500 11.28 0.00 0.00 2.32
4665 6647 5.123186 TCCTTTTTATAGTGCACATTGGTCG 59.877 40.000 21.04 0.68 0.00 4.79
4759 6741 3.009143 AGCGGAAAAATAGTCCTTCACCT 59.991 43.478 0.00 0.00 32.53 4.00
4963 6945 1.455217 TGCCCGGTAGCTAGAGTCC 60.455 63.158 0.00 0.00 0.00 3.85
4970 6952 2.617774 CGGTAGCTAGAGTCCCTGTTAC 59.382 54.545 0.00 0.00 0.00 2.50
5032 7014 8.821686 TGGAACATCACCATTGATAGTTTTAT 57.178 30.769 0.00 0.00 40.79 1.40
5033 7015 8.902806 TGGAACATCACCATTGATAGTTTTATC 58.097 33.333 0.00 0.00 40.79 1.75
5034 7016 9.125026 GGAACATCACCATTGATAGTTTTATCT 57.875 33.333 0.00 0.00 40.79 1.98
5035 7017 9.941664 GAACATCACCATTGATAGTTTTATCTG 57.058 33.333 0.00 0.00 40.79 2.90
5208 7190 2.681344 CCGTGATAGGTGCCTTAAAACC 59.319 50.000 0.00 0.00 36.66 3.27
5336 7319 5.282055 TGTGCACATATTCTCCCTAAGAG 57.718 43.478 17.42 0.00 44.75 2.85
5404 7387 4.383552 GGGCTGTCAGTGAATTCTCATACT 60.384 45.833 7.05 0.00 33.05 2.12
5481 7464 4.431809 TGACCAAAGTTGAAGTTGCATTG 58.568 39.130 0.00 0.00 0.00 2.82
5585 7568 6.484643 GGATATCATGTCTTGCTACATTGTGT 59.515 38.462 4.83 0.00 38.01 3.72
5625 7608 6.145535 CCGAAAATTTCTCTTTGGAGTTCTG 58.854 40.000 4.09 0.00 40.29 3.02
5762 7745 1.410153 TGCAGATGCTCTATTCTCGCA 59.590 47.619 6.35 0.00 42.66 5.10
5848 7831 7.546358 TGCAGGTAAATTATTTGACCATTCAG 58.454 34.615 14.18 4.98 34.18 3.02
5954 7937 4.965532 AGGTCCTACTGAATACTCTGCAAT 59.034 41.667 0.00 0.00 0.00 3.56
6164 8147 9.937175 GCATATAAACCTTTGAGTGAAGAATAC 57.063 33.333 0.00 0.00 0.00 1.89
6212 8195 4.137543 GGATGGAACTGGCAACTATTAGG 58.862 47.826 0.00 0.00 37.61 2.69
6316 8299 6.595716 ACAACTTAGATTCTCTACATGCCAAC 59.404 38.462 0.00 0.00 0.00 3.77
6441 8424 9.218440 AGTGCCAAATTTGATTAAATACTTTGG 57.782 29.630 19.86 16.53 41.73 3.28
6525 8508 4.339247 AGACAATTTAGGCCAATTCATCGG 59.661 41.667 5.01 0.00 0.00 4.18
6825 8809 4.577687 TTACGTGCATTTAAGAAGAGCG 57.422 40.909 0.00 0.00 0.00 5.03
6950 8955 1.749063 TGGTAGCATCGACTGTACCAG 59.251 52.381 14.63 0.00 36.97 4.00
7176 9197 4.559862 AATCGAGACCTGGATCTTGTTT 57.440 40.909 0.00 2.90 32.58 2.83
7178 9199 3.664107 TCGAGACCTGGATCTTGTTTTG 58.336 45.455 0.00 0.00 32.58 2.44
7282 9312 4.413189 TGATCATTTTAGGGCATCTCTGGA 59.587 41.667 0.00 0.00 0.00 3.86
7305 9335 9.983024 TGGAACATCCCTCAAAAGTTATATTTA 57.017 29.630 0.00 0.00 35.03 1.40
7399 9431 7.900782 TCGACTTTCTATCCCTTAAACTTTG 57.099 36.000 0.00 0.00 0.00 2.77
7427 9459 5.701290 CACTTCCCTACTTTTACTCCAACAG 59.299 44.000 0.00 0.00 0.00 3.16
7476 9508 3.258290 GCCTCGCGCAGTAAGAGC 61.258 66.667 8.75 1.48 39.93 4.09
7477 9509 2.181777 CCTCGCGCAGTAAGAGCA 59.818 61.111 8.75 0.00 43.95 4.26
7478 9510 1.227089 CCTCGCGCAGTAAGAGCAT 60.227 57.895 8.75 0.00 43.95 3.79
7479 9511 1.485838 CCTCGCGCAGTAAGAGCATG 61.486 60.000 8.75 0.00 43.95 4.06
7480 9512 1.485838 CTCGCGCAGTAAGAGCATGG 61.486 60.000 8.75 0.00 43.95 3.66
7481 9513 1.811266 CGCGCAGTAAGAGCATGGT 60.811 57.895 8.75 0.00 43.95 3.55
7482 9514 1.361668 CGCGCAGTAAGAGCATGGTT 61.362 55.000 8.75 0.00 43.95 3.67
7483 9515 1.651987 GCGCAGTAAGAGCATGGTTA 58.348 50.000 0.30 0.00 43.16 2.85
7484 9516 2.006888 GCGCAGTAAGAGCATGGTTAA 58.993 47.619 0.30 0.00 43.16 2.01
7485 9517 2.614057 GCGCAGTAAGAGCATGGTTAAT 59.386 45.455 0.30 0.00 43.16 1.40
7486 9518 3.807622 GCGCAGTAAGAGCATGGTTAATA 59.192 43.478 0.30 0.00 43.16 0.98
7487 9519 4.084328 GCGCAGTAAGAGCATGGTTAATAG 60.084 45.833 0.30 0.00 43.16 1.73
7488 9520 5.050490 CGCAGTAAGAGCATGGTTAATAGT 58.950 41.667 0.00 0.00 0.00 2.12
7489 9521 6.213677 CGCAGTAAGAGCATGGTTAATAGTA 58.786 40.000 0.00 0.00 0.00 1.82
7490 9522 6.868864 CGCAGTAAGAGCATGGTTAATAGTAT 59.131 38.462 0.00 0.00 0.00 2.12
7491 9523 8.027189 CGCAGTAAGAGCATGGTTAATAGTATA 58.973 37.037 0.00 0.00 0.00 1.47
7492 9524 9.360093 GCAGTAAGAGCATGGTTAATAGTATAG 57.640 37.037 0.00 0.00 0.00 1.31
7493 9525 9.360093 CAGTAAGAGCATGGTTAATAGTATAGC 57.640 37.037 0.00 0.00 0.00 2.97
7494 9526 8.532819 AGTAAGAGCATGGTTAATAGTATAGCC 58.467 37.037 0.00 0.00 0.00 3.93
7495 9527 6.935240 AGAGCATGGTTAATAGTATAGCCA 57.065 37.500 0.00 3.65 39.96 4.75
7496 9528 6.940739 AGAGCATGGTTAATAGTATAGCCAG 58.059 40.000 0.00 2.11 39.18 4.85
7497 9529 5.491982 AGCATGGTTAATAGTATAGCCAGC 58.508 41.667 0.00 8.73 39.18 4.85
7498 9530 5.249393 AGCATGGTTAATAGTATAGCCAGCT 59.751 40.000 0.00 0.00 39.18 4.24
7499 9531 5.352569 GCATGGTTAATAGTATAGCCAGCTG 59.647 44.000 6.78 6.78 39.18 4.24
7500 9532 4.894784 TGGTTAATAGTATAGCCAGCTGC 58.105 43.478 8.66 3.91 41.71 5.25
7522 9554 1.972872 GCTATAAGCCAGTGCCATGT 58.027 50.000 0.00 0.00 38.69 3.21
7523 9555 1.876156 GCTATAAGCCAGTGCCATGTC 59.124 52.381 0.00 0.00 38.69 3.06
7524 9556 2.746142 GCTATAAGCCAGTGCCATGTCA 60.746 50.000 0.00 0.00 38.69 3.58
7525 9557 2.742428 ATAAGCCAGTGCCATGTCAT 57.258 45.000 0.00 0.00 38.69 3.06
7526 9558 2.042686 TAAGCCAGTGCCATGTCATC 57.957 50.000 0.00 0.00 38.69 2.92
7527 9559 0.330604 AAGCCAGTGCCATGTCATCT 59.669 50.000 0.00 0.00 38.69 2.90
7528 9560 1.206878 AGCCAGTGCCATGTCATCTA 58.793 50.000 0.00 0.00 38.69 1.98
7529 9561 1.134280 AGCCAGTGCCATGTCATCTAC 60.134 52.381 0.00 0.00 38.69 2.59
7530 9562 1.407299 GCCAGTGCCATGTCATCTACA 60.407 52.381 0.00 0.00 43.86 2.74
7531 9563 2.558378 CCAGTGCCATGTCATCTACAG 58.442 52.381 0.00 0.00 42.70 2.74
7532 9564 1.938577 CAGTGCCATGTCATCTACAGC 59.061 52.381 0.00 0.00 42.70 4.40
7533 9565 1.134280 AGTGCCATGTCATCTACAGCC 60.134 52.381 0.00 0.00 42.70 4.85
7534 9566 0.181114 TGCCATGTCATCTACAGCCC 59.819 55.000 0.00 0.00 42.70 5.19
7535 9567 0.181114 GCCATGTCATCTACAGCCCA 59.819 55.000 0.00 0.00 42.70 5.36
7536 9568 1.202855 GCCATGTCATCTACAGCCCAT 60.203 52.381 0.00 0.00 42.70 4.00
7537 9569 2.775890 CCATGTCATCTACAGCCCATC 58.224 52.381 0.00 0.00 42.70 3.51
7538 9570 2.371179 CCATGTCATCTACAGCCCATCT 59.629 50.000 0.00 0.00 42.70 2.90
7539 9571 3.181447 CCATGTCATCTACAGCCCATCTT 60.181 47.826 0.00 0.00 42.70 2.40
7540 9572 4.040829 CCATGTCATCTACAGCCCATCTTA 59.959 45.833 0.00 0.00 42.70 2.10
7541 9573 5.280368 CCATGTCATCTACAGCCCATCTTAT 60.280 44.000 0.00 0.00 42.70 1.73
7542 9574 6.070596 CCATGTCATCTACAGCCCATCTTATA 60.071 42.308 0.00 0.00 42.70 0.98
7543 9575 6.596309 TGTCATCTACAGCCCATCTTATAG 57.404 41.667 0.00 0.00 33.01 1.31
7544 9576 5.481824 TGTCATCTACAGCCCATCTTATAGG 59.518 44.000 0.00 0.00 33.01 2.57
7552 9584 3.490348 GCCCATCTTATAGGCAACATGT 58.510 45.455 0.00 0.00 46.34 3.21
7553 9585 4.651778 GCCCATCTTATAGGCAACATGTA 58.348 43.478 0.00 0.00 46.34 2.29
7554 9586 5.256474 GCCCATCTTATAGGCAACATGTAT 58.744 41.667 0.00 0.00 46.34 2.29
7555 9587 6.414732 GCCCATCTTATAGGCAACATGTATA 58.585 40.000 0.00 0.00 46.34 1.47
7556 9588 6.884295 GCCCATCTTATAGGCAACATGTATAA 59.116 38.462 0.00 0.00 46.34 0.98
7557 9589 7.557719 GCCCATCTTATAGGCAACATGTATAAT 59.442 37.037 0.00 0.00 46.34 1.28
7568 9600 9.845740 AGGCAACATGTATAATAGTACATCAAA 57.154 29.630 0.00 0.00 41.96 2.69
7605 9637 5.669164 TTTTATTATGTGGCCCACCTTTC 57.331 39.130 12.25 0.00 36.63 2.62
7606 9638 2.917713 ATTATGTGGCCCACCTTTCA 57.082 45.000 12.25 0.00 36.63 2.69
7607 9639 2.917713 TTATGTGGCCCACCTTTCAT 57.082 45.000 12.25 0.00 36.63 2.57
7608 9640 2.917713 TATGTGGCCCACCTTTCATT 57.082 45.000 12.25 0.00 36.63 2.57
7609 9641 1.560505 ATGTGGCCCACCTTTCATTC 58.439 50.000 12.25 0.00 36.63 2.67
7610 9642 0.482446 TGTGGCCCACCTTTCATTCT 59.518 50.000 12.25 0.00 36.63 2.40
7611 9643 1.177401 GTGGCCCACCTTTCATTCTC 58.823 55.000 1.17 0.00 36.63 2.87
7612 9644 0.776810 TGGCCCACCTTTCATTCTCA 59.223 50.000 0.00 0.00 36.63 3.27
7613 9645 1.177401 GGCCCACCTTTCATTCTCAC 58.823 55.000 0.00 0.00 0.00 3.51
7614 9646 1.547675 GGCCCACCTTTCATTCTCACA 60.548 52.381 0.00 0.00 0.00 3.58
7615 9647 2.238521 GCCCACCTTTCATTCTCACAA 58.761 47.619 0.00 0.00 0.00 3.33
7616 9648 2.627699 GCCCACCTTTCATTCTCACAAA 59.372 45.455 0.00 0.00 0.00 2.83
7617 9649 3.305608 GCCCACCTTTCATTCTCACAAAG 60.306 47.826 0.00 0.00 0.00 2.77
7618 9650 3.891366 CCCACCTTTCATTCTCACAAAGT 59.109 43.478 0.00 0.00 0.00 2.66
7619 9651 4.261741 CCCACCTTTCATTCTCACAAAGTG 60.262 45.833 0.00 0.00 34.45 3.16
7620 9652 4.293415 CACCTTTCATTCTCACAAAGTGC 58.707 43.478 0.00 0.00 32.98 4.40
7621 9653 3.319122 ACCTTTCATTCTCACAAAGTGCC 59.681 43.478 0.00 0.00 32.98 5.01
7622 9654 3.571401 CCTTTCATTCTCACAAAGTGCCT 59.429 43.478 0.00 0.00 32.98 4.75
7623 9655 4.761739 CCTTTCATTCTCACAAAGTGCCTA 59.238 41.667 0.00 0.00 32.98 3.93
7624 9656 5.106396 CCTTTCATTCTCACAAAGTGCCTAG 60.106 44.000 0.00 0.00 32.98 3.02
7625 9657 3.942829 TCATTCTCACAAAGTGCCTAGG 58.057 45.455 3.67 3.67 32.98 3.02
7626 9658 3.582647 TCATTCTCACAAAGTGCCTAGGA 59.417 43.478 14.75 0.00 32.98 2.94
7627 9659 3.685139 TTCTCACAAAGTGCCTAGGAG 57.315 47.619 14.75 0.00 32.98 3.69
7628 9660 1.276421 TCTCACAAAGTGCCTAGGAGC 59.724 52.381 14.75 3.68 32.98 4.70
7629 9661 1.002430 CTCACAAAGTGCCTAGGAGCA 59.998 52.381 14.75 0.22 41.46 4.26
7644 9676 3.191539 GCACGTGCTAGAGCTGGC 61.192 66.667 32.55 1.87 42.66 4.85
7645 9677 2.575993 CACGTGCTAGAGCTGGCT 59.424 61.111 0.82 0.00 42.66 4.75
7646 9678 1.518133 CACGTGCTAGAGCTGGCTC 60.518 63.158 14.02 14.02 42.66 4.70
7654 9686 4.996976 GAGCTGGCTCTTCACGAA 57.003 55.556 14.51 0.00 39.80 3.85
7655 9687 2.748268 GAGCTGGCTCTTCACGAAG 58.252 57.895 14.51 0.08 39.80 3.79
7656 9688 0.244994 GAGCTGGCTCTTCACGAAGA 59.755 55.000 14.51 9.08 44.47 2.87
7662 9694 2.261671 TCTTCACGAAGAGCCCGC 59.738 61.111 5.38 0.00 42.06 6.13
7663 9695 2.262915 CTTCACGAAGAGCCCGCT 59.737 61.111 0.20 0.00 40.79 5.52
7664 9696 1.374758 CTTCACGAAGAGCCCGCTT 60.375 57.895 0.20 0.00 40.79 4.68
7665 9697 0.108804 CTTCACGAAGAGCCCGCTTA 60.109 55.000 0.20 0.00 40.79 3.09
7666 9698 0.389426 TTCACGAAGAGCCCGCTTAC 60.389 55.000 0.00 0.00 0.00 2.34
7667 9699 1.810030 CACGAAGAGCCCGCTTACC 60.810 63.158 0.00 0.00 0.00 2.85
7668 9700 1.982938 ACGAAGAGCCCGCTTACCT 60.983 57.895 0.00 0.00 0.00 3.08
7669 9701 1.218316 CGAAGAGCCCGCTTACCTT 59.782 57.895 0.00 0.00 0.00 3.50
7670 9702 0.806492 CGAAGAGCCCGCTTACCTTC 60.806 60.000 6.57 6.57 0.00 3.46
7671 9703 0.537653 GAAGAGCCCGCTTACCTTCT 59.462 55.000 8.59 0.00 32.72 2.85
7672 9704 0.537653 AAGAGCCCGCTTACCTTCTC 59.462 55.000 0.00 0.00 0.00 2.87
7673 9705 0.324830 AGAGCCCGCTTACCTTCTCT 60.325 55.000 0.00 0.00 0.00 3.10
7674 9706 0.103390 GAGCCCGCTTACCTTCTCTC 59.897 60.000 0.00 0.00 0.00 3.20
7675 9707 0.324830 AGCCCGCTTACCTTCTCTCT 60.325 55.000 0.00 0.00 0.00 3.10
7676 9708 0.103390 GCCCGCTTACCTTCTCTCTC 59.897 60.000 0.00 0.00 0.00 3.20
7677 9709 0.747852 CCCGCTTACCTTCTCTCTCC 59.252 60.000 0.00 0.00 0.00 3.71
7678 9710 1.686741 CCCGCTTACCTTCTCTCTCCT 60.687 57.143 0.00 0.00 0.00 3.69
7679 9711 1.679153 CCGCTTACCTTCTCTCTCCTC 59.321 57.143 0.00 0.00 0.00 3.71
7680 9712 2.650322 CGCTTACCTTCTCTCTCCTCT 58.350 52.381 0.00 0.00 0.00 3.69
7681 9713 3.020984 CGCTTACCTTCTCTCTCCTCTT 58.979 50.000 0.00 0.00 0.00 2.85
7682 9714 3.066203 CGCTTACCTTCTCTCTCCTCTTC 59.934 52.174 0.00 0.00 0.00 2.87
7683 9715 4.278310 GCTTACCTTCTCTCTCCTCTTCT 58.722 47.826 0.00 0.00 0.00 2.85
7684 9716 4.338400 GCTTACCTTCTCTCTCCTCTTCTC 59.662 50.000 0.00 0.00 0.00 2.87
7685 9717 5.755849 CTTACCTTCTCTCTCCTCTTCTCT 58.244 45.833 0.00 0.00 0.00 3.10
7686 9718 4.675063 ACCTTCTCTCTCCTCTTCTCTT 57.325 45.455 0.00 0.00 0.00 2.85
7687 9719 5.010708 ACCTTCTCTCTCCTCTTCTCTTT 57.989 43.478 0.00 0.00 0.00 2.52
7688 9720 5.016831 ACCTTCTCTCTCCTCTTCTCTTTC 58.983 45.833 0.00 0.00 0.00 2.62
7689 9721 4.402474 CCTTCTCTCTCCTCTTCTCTTTCC 59.598 50.000 0.00 0.00 0.00 3.13
7690 9722 4.946160 TCTCTCTCCTCTTCTCTTTCCT 57.054 45.455 0.00 0.00 0.00 3.36
7691 9723 4.855340 TCTCTCTCCTCTTCTCTTTCCTC 58.145 47.826 0.00 0.00 0.00 3.71
7692 9724 3.954258 CTCTCTCCTCTTCTCTTTCCTCC 59.046 52.174 0.00 0.00 0.00 4.30
7693 9725 3.335183 TCTCTCCTCTTCTCTTTCCTCCA 59.665 47.826 0.00 0.00 0.00 3.86
7694 9726 4.093011 CTCTCCTCTTCTCTTTCCTCCAA 58.907 47.826 0.00 0.00 0.00 3.53
7695 9727 3.835395 TCTCCTCTTCTCTTTCCTCCAAC 59.165 47.826 0.00 0.00 0.00 3.77
7696 9728 3.837731 CTCCTCTTCTCTTTCCTCCAACT 59.162 47.826 0.00 0.00 0.00 3.16
7697 9729 5.011982 TCCTCTTCTCTTTCCTCCAACTA 57.988 43.478 0.00 0.00 0.00 2.24
7698 9730 5.403512 TCCTCTTCTCTTTCCTCCAACTAA 58.596 41.667 0.00 0.00 0.00 2.24
7699 9731 5.482175 TCCTCTTCTCTTTCCTCCAACTAAG 59.518 44.000 0.00 0.00 0.00 2.18
7700 9732 5.153950 TCTTCTCTTTCCTCCAACTAAGC 57.846 43.478 0.00 0.00 0.00 3.09
7701 9733 4.593206 TCTTCTCTTTCCTCCAACTAAGCA 59.407 41.667 0.00 0.00 0.00 3.91
7702 9734 4.543590 TCTCTTTCCTCCAACTAAGCAG 57.456 45.455 0.00 0.00 0.00 4.24
7703 9735 4.160329 TCTCTTTCCTCCAACTAAGCAGA 58.840 43.478 0.00 0.00 0.00 4.26
7704 9736 4.593206 TCTCTTTCCTCCAACTAAGCAGAA 59.407 41.667 0.00 0.00 0.00 3.02
7705 9737 5.071788 TCTCTTTCCTCCAACTAAGCAGAAA 59.928 40.000 0.00 0.00 0.00 2.52
7706 9738 5.880901 TCTTTCCTCCAACTAAGCAGAAAT 58.119 37.500 0.00 0.00 0.00 2.17
7707 9739 7.016153 TCTTTCCTCCAACTAAGCAGAAATA 57.984 36.000 0.00 0.00 0.00 1.40
7708 9740 7.633789 TCTTTCCTCCAACTAAGCAGAAATAT 58.366 34.615 0.00 0.00 0.00 1.28
7709 9741 8.768397 TCTTTCCTCCAACTAAGCAGAAATATA 58.232 33.333 0.00 0.00 0.00 0.86
7710 9742 8.732746 TTTCCTCCAACTAAGCAGAAATATAC 57.267 34.615 0.00 0.00 0.00 1.47
7711 9743 7.676683 TCCTCCAACTAAGCAGAAATATACT 57.323 36.000 0.00 0.00 0.00 2.12
7712 9744 8.777578 TCCTCCAACTAAGCAGAAATATACTA 57.222 34.615 0.00 0.00 0.00 1.82
7713 9745 8.861086 TCCTCCAACTAAGCAGAAATATACTAG 58.139 37.037 0.00 0.00 0.00 2.57
7714 9746 8.643324 CCTCCAACTAAGCAGAAATATACTAGT 58.357 37.037 0.00 0.00 0.00 2.57
7732 9764 5.791666 ACTAGTTTATTCCTTATAGCCCGC 58.208 41.667 0.00 0.00 0.00 6.13
7733 9765 4.976540 AGTTTATTCCTTATAGCCCGCT 57.023 40.909 0.00 0.00 0.00 5.52
7734 9766 4.642429 AGTTTATTCCTTATAGCCCGCTG 58.358 43.478 0.00 0.00 0.00 5.18
7735 9767 4.347000 AGTTTATTCCTTATAGCCCGCTGA 59.653 41.667 0.00 0.00 0.00 4.26
7736 9768 2.841442 ATTCCTTATAGCCCGCTGAC 57.159 50.000 0.00 0.00 0.00 3.51
7737 9769 1.789523 TTCCTTATAGCCCGCTGACT 58.210 50.000 0.00 0.00 0.00 3.41
7738 9770 1.329256 TCCTTATAGCCCGCTGACTC 58.671 55.000 0.00 0.00 0.00 3.36
7739 9771 1.040646 CCTTATAGCCCGCTGACTCA 58.959 55.000 0.00 0.00 0.00 3.41
7740 9772 1.000283 CCTTATAGCCCGCTGACTCAG 60.000 57.143 1.21 1.21 34.12 3.35
7756 9788 6.968263 TGACTCAGCTCTATTATACTTGCT 57.032 37.500 0.00 0.00 0.00 3.91
7757 9789 6.976088 TGACTCAGCTCTATTATACTTGCTC 58.024 40.000 0.00 0.00 0.00 4.26
7758 9790 6.775142 TGACTCAGCTCTATTATACTTGCTCT 59.225 38.462 0.00 0.00 0.00 4.09
7759 9791 7.939588 TGACTCAGCTCTATTATACTTGCTCTA 59.060 37.037 0.00 0.00 0.00 2.43
7760 9792 8.698973 ACTCAGCTCTATTATACTTGCTCTAA 57.301 34.615 0.00 0.00 0.00 2.10
7801 9833 3.057946 GCTTGCCTCTGTTGGAGTAAAAG 60.058 47.826 0.00 0.00 40.30 2.27
7805 9837 4.591498 TGCCTCTGTTGGAGTAAAAGTAGA 59.409 41.667 0.00 0.00 40.30 2.59
7806 9838 5.071250 TGCCTCTGTTGGAGTAAAAGTAGAA 59.929 40.000 0.00 0.00 40.30 2.10
7808 9840 6.147985 GCCTCTGTTGGAGTAAAAGTAGAAAG 59.852 42.308 0.00 0.00 40.30 2.62
7809 9841 6.147985 CCTCTGTTGGAGTAAAAGTAGAAAGC 59.852 42.308 0.00 0.00 40.30 3.51
7840 9873 6.063496 AGTTTAAGGGATAGAAAGTCCACC 57.937 41.667 0.00 0.00 37.49 4.61
7859 9892 3.340789 GTGTCGCACCCCAAACTC 58.659 61.111 0.00 0.00 0.00 3.01
7860 9893 2.280524 TGTCGCACCCCAAACTCG 60.281 61.111 0.00 0.00 0.00 4.18
7861 9894 3.723348 GTCGCACCCCAAACTCGC 61.723 66.667 0.00 0.00 0.00 5.03
7864 9897 4.966787 GCACCCCAAACTCGCCCA 62.967 66.667 0.00 0.00 0.00 5.36
7865 9898 2.983592 CACCCCAAACTCGCCCAC 60.984 66.667 0.00 0.00 0.00 4.61
7866 9899 3.494254 ACCCCAAACTCGCCCACA 61.494 61.111 0.00 0.00 0.00 4.17
7867 9900 2.035626 CCCCAAACTCGCCCACAT 59.964 61.111 0.00 0.00 0.00 3.21
7868 9901 2.046285 CCCCAAACTCGCCCACATC 61.046 63.158 0.00 0.00 0.00 3.06
7869 9902 1.002134 CCCAAACTCGCCCACATCT 60.002 57.895 0.00 0.00 0.00 2.90
7870 9903 1.026718 CCCAAACTCGCCCACATCTC 61.027 60.000 0.00 0.00 0.00 2.75
7871 9904 1.026718 CCAAACTCGCCCACATCTCC 61.027 60.000 0.00 0.00 0.00 3.71
7872 9905 1.026718 CAAACTCGCCCACATCTCCC 61.027 60.000 0.00 0.00 0.00 4.30
7873 9906 1.201429 AAACTCGCCCACATCTCCCT 61.201 55.000 0.00 0.00 0.00 4.20
7874 9907 1.617947 AACTCGCCCACATCTCCCTC 61.618 60.000 0.00 0.00 0.00 4.30
7875 9908 2.764128 TCGCCCACATCTCCCTCC 60.764 66.667 0.00 0.00 0.00 4.30
7876 9909 3.866582 CGCCCACATCTCCCTCCC 61.867 72.222 0.00 0.00 0.00 4.30
7877 9910 2.367512 GCCCACATCTCCCTCCCT 60.368 66.667 0.00 0.00 0.00 4.20
7878 9911 2.447714 GCCCACATCTCCCTCCCTC 61.448 68.421 0.00 0.00 0.00 4.30
7879 9912 1.003442 CCCACATCTCCCTCCCTCA 59.997 63.158 0.00 0.00 0.00 3.86
7880 9913 0.621571 CCCACATCTCCCTCCCTCAA 60.622 60.000 0.00 0.00 0.00 3.02
7881 9914 1.289160 CCACATCTCCCTCCCTCAAA 58.711 55.000 0.00 0.00 0.00 2.69
7882 9915 1.635487 CCACATCTCCCTCCCTCAAAA 59.365 52.381 0.00 0.00 0.00 2.44
7883 9916 2.356535 CCACATCTCCCTCCCTCAAAAG 60.357 54.545 0.00 0.00 0.00 2.27
7884 9917 2.573462 CACATCTCCCTCCCTCAAAAGA 59.427 50.000 0.00 0.00 0.00 2.52
7885 9918 3.009473 CACATCTCCCTCCCTCAAAAGAA 59.991 47.826 0.00 0.00 0.00 2.52
7886 9919 3.657727 ACATCTCCCTCCCTCAAAAGAAA 59.342 43.478 0.00 0.00 0.00 2.52
7887 9920 4.106341 ACATCTCCCTCCCTCAAAAGAAAA 59.894 41.667 0.00 0.00 0.00 2.29
7908 9941 2.198304 AAACTCGCCCACATCTCCCC 62.198 60.000 0.00 0.00 0.00 4.81
7909 9942 3.083349 CTCGCCCACATCTCCCCA 61.083 66.667 0.00 0.00 0.00 4.96
7910 9943 2.609299 TCGCCCACATCTCCCCAA 60.609 61.111 0.00 0.00 0.00 4.12
7911 9944 2.438434 CGCCCACATCTCCCCAAC 60.438 66.667 0.00 0.00 0.00 3.77
7912 9945 2.043953 GCCCACATCTCCCCAACC 60.044 66.667 0.00 0.00 0.00 3.77
7913 9946 2.917897 GCCCACATCTCCCCAACCA 61.918 63.158 0.00 0.00 0.00 3.67
7914 9947 2.010067 CCCACATCTCCCCAACCAT 58.990 57.895 0.00 0.00 0.00 3.55
7915 9948 0.396139 CCCACATCTCCCCAACCATG 60.396 60.000 0.00 0.00 0.00 3.66
7916 9949 0.332632 CCACATCTCCCCAACCATGT 59.667 55.000 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.321653 GCCCCCACTTGACACTACTG 60.322 60.000 0.00 0.00 0.00 2.74
1 2 1.827399 CGCCCCCACTTGACACTACT 61.827 60.000 0.00 0.00 0.00 2.57
2 3 1.375523 CGCCCCCACTTGACACTAC 60.376 63.158 0.00 0.00 0.00 2.73
3 4 1.534476 TCGCCCCCACTTGACACTA 60.534 57.895 0.00 0.00 0.00 2.74
4 5 2.847234 TCGCCCCCACTTGACACT 60.847 61.111 0.00 0.00 0.00 3.55
7 8 2.112297 TTGTCGCCCCCACTTGAC 59.888 61.111 0.00 0.00 0.00 3.18
9 10 2.203280 TGTTGTCGCCCCCACTTG 60.203 61.111 0.00 0.00 0.00 3.16
10 11 2.203294 GTGTTGTCGCCCCCACTT 60.203 61.111 0.00 0.00 0.00 3.16
11 12 3.168528 AGTGTTGTCGCCCCCACT 61.169 61.111 0.00 0.00 33.48 4.00
12 13 2.978010 CAGTGTTGTCGCCCCCAC 60.978 66.667 0.00 0.00 0.00 4.61
13 14 4.263572 CCAGTGTTGTCGCCCCCA 62.264 66.667 0.00 0.00 0.00 4.96
14 15 3.901797 CTCCAGTGTTGTCGCCCCC 62.902 68.421 0.00 0.00 0.00 5.40
27 28 4.284234 ACCACCAAAAATGAAATCCTCCAG 59.716 41.667 0.00 0.00 0.00 3.86
63 64 4.002982 TCACCTTGAAAATCATGACTCGG 58.997 43.478 0.00 0.00 0.00 4.63
93 95 3.319755 CACAAACAATGAATGCCAGACC 58.680 45.455 0.00 0.00 0.00 3.85
96 98 2.070783 GGCACAAACAATGAATGCCAG 58.929 47.619 8.64 0.00 45.82 4.85
99 101 2.070783 CCAGGCACAAACAATGAATGC 58.929 47.619 0.00 0.00 31.91 3.56
100 102 2.070783 GCCAGGCACAAACAATGAATG 58.929 47.619 6.55 0.00 0.00 2.67
101 103 1.693062 TGCCAGGCACAAACAATGAAT 59.307 42.857 11.22 0.00 31.71 2.57
109 111 4.775295 GCAATTGCCAGGCACAAA 57.225 50.000 20.06 0.00 38.71 2.83
149 151 0.174617 CCTGGAGAAAGACCGAGCTC 59.825 60.000 2.73 2.73 0.00 4.09
151 153 1.219393 CCCTGGAGAAAGACCGAGC 59.781 63.158 0.00 0.00 0.00 5.03
153 155 0.178944 TCACCCTGGAGAAAGACCGA 60.179 55.000 0.00 0.00 0.00 4.69
164 166 5.337491 CCAAAATCATAGGTTTTCACCCTGG 60.337 44.000 0.00 0.00 45.63 4.45
166 168 5.650283 TCCAAAATCATAGGTTTTCACCCT 58.350 37.500 0.00 0.00 45.63 4.34
181 183 2.222729 CGTTGTCGTCCGATCCAAAATC 60.223 50.000 0.00 0.00 0.00 2.17
184 186 0.668096 CCGTTGTCGTCCGATCCAAA 60.668 55.000 0.00 0.00 35.01 3.28
194 196 3.636043 CACAAGCGCCGTTGTCGT 61.636 61.111 11.68 0.00 38.65 4.34
233 235 3.140325 TGAAAGGTCTCCAAAAGCGAT 57.860 42.857 0.00 0.00 0.00 4.58
252 254 0.596082 GACAACACCCGGGAAACATG 59.404 55.000 32.02 17.86 0.00 3.21
259 261 0.881118 CATCAAAGACAACACCCGGG 59.119 55.000 22.25 22.25 0.00 5.73
261 263 1.266718 CACCATCAAAGACAACACCCG 59.733 52.381 0.00 0.00 0.00 5.28
276 278 0.685097 AGCAGTACACGAACCACCAT 59.315 50.000 0.00 0.00 0.00 3.55
290 292 0.321021 CAACTCCTCTCAGCAGCAGT 59.679 55.000 0.00 0.00 0.00 4.40
294 296 2.496871 AGTGATCAACTCCTCTCAGCAG 59.503 50.000 0.00 0.00 31.64 4.24
385 387 0.940126 CACACAGTCTCTGCACCAAC 59.060 55.000 0.00 0.00 34.37 3.77
389 391 3.187227 CCAATTACACACAGTCTCTGCAC 59.813 47.826 0.00 0.00 34.37 4.57
392 394 6.634805 AGATACCAATTACACACAGTCTCTG 58.365 40.000 0.00 0.00 37.52 3.35
393 395 6.859112 AGATACCAATTACACACAGTCTCT 57.141 37.500 0.00 0.00 0.00 3.10
395 397 6.100004 CGAAGATACCAATTACACACAGTCT 58.900 40.000 0.00 0.00 0.00 3.24
396 398 5.220416 GCGAAGATACCAATTACACACAGTC 60.220 44.000 0.00 0.00 0.00 3.51
397 399 4.630069 GCGAAGATACCAATTACACACAGT 59.370 41.667 0.00 0.00 0.00 3.55
398 400 4.259810 CGCGAAGATACCAATTACACACAG 60.260 45.833 0.00 0.00 0.00 3.66
399 401 3.615056 CGCGAAGATACCAATTACACACA 59.385 43.478 0.00 0.00 0.00 3.72
436 443 6.043822 TCCATCCCATATATGAACGAAAAGGA 59.956 38.462 14.54 9.50 0.00 3.36
437 444 6.237901 TCCATCCCATATATGAACGAAAAGG 58.762 40.000 14.54 4.36 0.00 3.11
438 445 7.928307 ATCCATCCCATATATGAACGAAAAG 57.072 36.000 14.54 0.00 0.00 2.27
444 451 6.153340 CACCCAAATCCATCCCATATATGAAC 59.847 42.308 14.54 0.00 0.00 3.18
452 459 1.412074 GCTCACCCAAATCCATCCCAT 60.412 52.381 0.00 0.00 0.00 4.00
460 467 1.026718 CAGTCCGGCTCACCCAAATC 61.027 60.000 0.00 0.00 0.00 2.17
472 479 2.019249 TCAACCGTCTATACAGTCCGG 58.981 52.381 0.00 0.00 40.70 5.14
484 491 4.093556 CAGGCTCTCTAAAATTCAACCGTC 59.906 45.833 0.00 0.00 0.00 4.79
490 497 3.009473 ACCAGCAGGCTCTCTAAAATTCA 59.991 43.478 0.00 0.00 39.06 2.57
525 533 2.606519 TCTGTTGGGAGGGTCCGG 60.607 66.667 0.00 0.00 37.43 5.14
528 536 4.569719 TTATTTCTCTGTTGGGAGGGTC 57.430 45.455 0.00 0.00 34.39 4.46
530 538 4.923415 AGTTTATTTCTCTGTTGGGAGGG 58.077 43.478 0.00 0.00 34.39 4.30
577 592 9.419297 GCATGCATACAGATGAATCAAATAAAT 57.581 29.630 14.21 0.00 34.73 1.40
578 593 8.414778 TGCATGCATACAGATGAATCAAATAAA 58.585 29.630 18.46 0.00 34.73 1.40
600 716 2.751259 CAATGCTCGGGCTATAATGCAT 59.249 45.455 9.62 0.00 42.01 3.96
619 735 1.383456 AACTGAGCAAACCAGCGCAA 61.383 50.000 11.47 0.00 43.57 4.85
649 765 4.385447 CCGGTTTAACGTGACGAATTTAGA 59.615 41.667 13.70 0.00 0.00 2.10
681 797 4.886247 TTTAAGTTGGACCGTTGTCTTG 57.114 40.909 0.00 0.00 41.47 3.02
704 820 5.567138 GGAGTCATCCGATGAATGTTTTT 57.433 39.130 15.74 0.00 41.69 1.94
864 1002 9.837525 GGAGAAATACTAATATATATACGGGCG 57.162 37.037 0.00 0.00 0.00 6.13
873 1011 9.771140 AGGACGAAGGGAGAAATACTAATATAT 57.229 33.333 0.00 0.00 0.00 0.86
874 1012 9.240734 GAGGACGAAGGGAGAAATACTAATATA 57.759 37.037 0.00 0.00 0.00 0.86
875 1013 7.728981 TGAGGACGAAGGGAGAAATACTAATAT 59.271 37.037 0.00 0.00 0.00 1.28
876 1014 7.064866 TGAGGACGAAGGGAGAAATACTAATA 58.935 38.462 0.00 0.00 0.00 0.98
877 1015 5.897824 TGAGGACGAAGGGAGAAATACTAAT 59.102 40.000 0.00 0.00 0.00 1.73
878 1016 5.266788 TGAGGACGAAGGGAGAAATACTAA 58.733 41.667 0.00 0.00 0.00 2.24
879 1017 4.863548 TGAGGACGAAGGGAGAAATACTA 58.136 43.478 0.00 0.00 0.00 1.82
880 1018 3.709587 TGAGGACGAAGGGAGAAATACT 58.290 45.455 0.00 0.00 0.00 2.12
881 1019 4.467198 TTGAGGACGAAGGGAGAAATAC 57.533 45.455 0.00 0.00 0.00 1.89
882 1020 5.492855 TTTTGAGGACGAAGGGAGAAATA 57.507 39.130 0.00 0.00 0.00 1.40
883 1021 4.367039 TTTTGAGGACGAAGGGAGAAAT 57.633 40.909 0.00 0.00 0.00 2.17
884 1022 3.849563 TTTTGAGGACGAAGGGAGAAA 57.150 42.857 0.00 0.00 0.00 2.52
885 1023 4.041691 AGAATTTTGAGGACGAAGGGAGAA 59.958 41.667 0.00 0.00 0.00 2.87
886 1024 3.583086 AGAATTTTGAGGACGAAGGGAGA 59.417 43.478 0.00 0.00 0.00 3.71
887 1025 3.686726 CAGAATTTTGAGGACGAAGGGAG 59.313 47.826 0.00 0.00 0.00 4.30
888 1026 3.674997 CAGAATTTTGAGGACGAAGGGA 58.325 45.455 0.00 0.00 0.00 4.20
889 1027 2.162408 GCAGAATTTTGAGGACGAAGGG 59.838 50.000 0.00 0.00 0.00 3.95
890 1028 3.077359 AGCAGAATTTTGAGGACGAAGG 58.923 45.455 0.00 0.00 0.00 3.46
891 1029 4.214119 TGAAGCAGAATTTTGAGGACGAAG 59.786 41.667 0.00 0.00 0.00 3.79
892 1030 4.133820 TGAAGCAGAATTTTGAGGACGAA 58.866 39.130 0.00 0.00 0.00 3.85
893 1031 3.738982 TGAAGCAGAATTTTGAGGACGA 58.261 40.909 0.00 0.00 0.00 4.20
894 1032 4.488126 TTGAAGCAGAATTTTGAGGACG 57.512 40.909 0.00 0.00 0.00 4.79
895 1033 5.405797 GGATTGAAGCAGAATTTTGAGGAC 58.594 41.667 0.00 0.00 0.00 3.85
896 1034 4.463891 GGGATTGAAGCAGAATTTTGAGGA 59.536 41.667 0.00 0.00 0.00 3.71
897 1035 4.382362 GGGGATTGAAGCAGAATTTTGAGG 60.382 45.833 0.00 0.00 0.00 3.86
898 1036 4.221262 TGGGGATTGAAGCAGAATTTTGAG 59.779 41.667 0.00 0.00 0.00 3.02
899 1037 4.158786 TGGGGATTGAAGCAGAATTTTGA 58.841 39.130 0.00 0.00 0.00 2.69
900 1038 4.540359 TGGGGATTGAAGCAGAATTTTG 57.460 40.909 0.00 0.00 0.00 2.44
901 1039 5.338626 GGATTGGGGATTGAAGCAGAATTTT 60.339 40.000 0.00 0.00 0.00 1.82
902 1040 4.162888 GGATTGGGGATTGAAGCAGAATTT 59.837 41.667 0.00 0.00 0.00 1.82
903 1041 3.708121 GGATTGGGGATTGAAGCAGAATT 59.292 43.478 0.00 0.00 0.00 2.17
904 1042 3.303049 GGATTGGGGATTGAAGCAGAAT 58.697 45.455 0.00 0.00 0.00 2.40
905 1043 2.624029 GGGATTGGGGATTGAAGCAGAA 60.624 50.000 0.00 0.00 0.00 3.02
906 1044 1.063717 GGGATTGGGGATTGAAGCAGA 60.064 52.381 0.00 0.00 0.00 4.26
907 1045 1.406903 GGGATTGGGGATTGAAGCAG 58.593 55.000 0.00 0.00 0.00 4.24
908 1046 0.032217 GGGGATTGGGGATTGAAGCA 60.032 55.000 0.00 0.00 0.00 3.91
909 1047 0.760567 GGGGGATTGGGGATTGAAGC 60.761 60.000 0.00 0.00 0.00 3.86
910 1048 0.468029 CGGGGGATTGGGGATTGAAG 60.468 60.000 0.00 0.00 0.00 3.02
911 1049 1.618030 CGGGGGATTGGGGATTGAA 59.382 57.895 0.00 0.00 0.00 2.69
912 1050 2.391130 CCGGGGGATTGGGGATTGA 61.391 63.158 0.00 0.00 0.00 2.57
913 1051 2.198426 CCGGGGGATTGGGGATTG 59.802 66.667 0.00 0.00 0.00 2.67
914 1052 3.832846 GCCGGGGGATTGGGGATT 61.833 66.667 2.18 0.00 0.00 3.01
966 1154 2.829003 CTGGCTGGCTGGCTGATG 60.829 66.667 18.27 3.56 41.53 3.07
1654 1878 1.689273 CTATGTCCAGGACAGCCCTAC 59.311 57.143 26.56 0.00 46.04 3.18
2000 2236 4.091945 GTCTGTGCTGTGTGTACATACATG 59.908 45.833 23.49 17.91 40.35 3.21
2289 3360 3.458189 CCTTAATTAGTGACTCTGCCGG 58.542 50.000 0.00 0.00 0.00 6.13
2290 3361 2.866762 GCCTTAATTAGTGACTCTGCCG 59.133 50.000 0.00 0.00 0.00 5.69
2301 3372 4.137543 AGCCATTCCTTCGCCTTAATTAG 58.862 43.478 0.00 0.00 0.00 1.73
2360 3431 5.989168 TGTTGTGTTATGGAGTTACAGACTG 59.011 40.000 0.00 0.00 39.19 3.51
2462 3533 5.163237 TGTGAAGTTACCTTTGTTAGAGGCT 60.163 40.000 0.00 0.00 37.84 4.58
2779 3867 8.461222 TGAAATCAATGTGGTAAGAGCAAATAG 58.539 33.333 0.00 0.00 0.00 1.73
3020 4109 8.656806 AGCAATTTCATGGATTTCATATGGATT 58.343 29.630 2.13 0.00 34.12 3.01
3021 4110 8.202461 AGCAATTTCATGGATTTCATATGGAT 57.798 30.769 2.13 0.00 34.12 3.41
3022 4111 7.256048 GGAGCAATTTCATGGATTTCATATGGA 60.256 37.037 2.13 0.00 34.12 3.41
3023 4112 6.872020 GGAGCAATTTCATGGATTTCATATGG 59.128 38.462 2.13 0.00 34.12 2.74
3024 4113 6.872020 GGGAGCAATTTCATGGATTTCATATG 59.128 38.462 0.00 0.00 34.12 1.78
3025 4114 6.785963 AGGGAGCAATTTCATGGATTTCATAT 59.214 34.615 0.00 0.00 34.12 1.78
3026 4115 6.041182 CAGGGAGCAATTTCATGGATTTCATA 59.959 38.462 0.00 0.00 34.12 2.15
3027 4116 4.966805 AGGGAGCAATTTCATGGATTTCAT 59.033 37.500 0.00 0.00 36.31 2.57
3028 4117 4.160814 CAGGGAGCAATTTCATGGATTTCA 59.839 41.667 0.00 0.00 0.00 2.69
3029 4118 4.161001 ACAGGGAGCAATTTCATGGATTTC 59.839 41.667 0.00 0.00 0.00 2.17
3030 4119 4.098894 ACAGGGAGCAATTTCATGGATTT 58.901 39.130 0.00 0.00 0.00 2.17
3045 4134 2.286365 TTGTGGCCTTTAACAGGGAG 57.714 50.000 3.32 0.00 44.16 4.30
3447 4540 3.576078 TCCTTGCAGAAAAGTTGAGGA 57.424 42.857 0.00 0.00 0.00 3.71
3701 5641 5.537300 AGTCGGTGTGATAAGAGCAATAT 57.463 39.130 0.00 0.00 0.00 1.28
3955 5895 7.501559 AGTGGAAGAGAATTTATCATGGTGATG 59.498 37.037 2.82 0.00 37.70 3.07
4143 6084 6.906157 AAGAACAACATCAATCCTGACAAT 57.094 33.333 0.00 0.00 33.30 2.71
4491 6473 6.414732 TCAAGGAAAAGAGAAGAGTCAAACA 58.585 36.000 0.00 0.00 0.00 2.83
4652 6634 1.803334 TTAGGACGACCAATGTGCAC 58.197 50.000 10.75 10.75 38.94 4.57
4759 6741 5.255397 ACACCATAGATTCAAGGACCAAA 57.745 39.130 0.00 0.00 0.00 3.28
4963 6945 6.317088 CAAGTGCATACTGAATTGTAACAGG 58.683 40.000 0.00 0.00 37.19 4.00
4970 6952 2.419673 TCGGCAAGTGCATACTGAATTG 59.580 45.455 5.52 0.00 44.36 2.32
4997 6979 6.608539 ATGGTGATGTTCCATTTCATTTCA 57.391 33.333 0.00 0.00 42.24 2.69
5013 6995 9.553064 GACTCAGATAAAACTATCAATGGTGAT 57.447 33.333 0.00 0.00 46.52 3.06
5014 6996 8.539544 TGACTCAGATAAAACTATCAATGGTGA 58.460 33.333 0.00 0.00 38.41 4.02
5015 6997 8.722480 TGACTCAGATAAAACTATCAATGGTG 57.278 34.615 0.00 0.00 0.00 4.17
5016 6998 9.739276 TTTGACTCAGATAAAACTATCAATGGT 57.261 29.630 0.00 0.00 0.00 3.55
5021 7003 8.677300 GCCATTTTGACTCAGATAAAACTATCA 58.323 33.333 0.00 0.00 0.00 2.15
5022 7004 8.677300 TGCCATTTTGACTCAGATAAAACTATC 58.323 33.333 0.00 0.00 0.00 2.08
5023 7005 8.579850 TGCCATTTTGACTCAGATAAAACTAT 57.420 30.769 0.00 0.00 0.00 2.12
5024 7006 7.882791 TCTGCCATTTTGACTCAGATAAAACTA 59.117 33.333 0.00 0.00 0.00 2.24
5025 7007 6.716628 TCTGCCATTTTGACTCAGATAAAACT 59.283 34.615 0.00 0.00 0.00 2.66
5026 7008 6.913170 TCTGCCATTTTGACTCAGATAAAAC 58.087 36.000 0.00 0.00 0.00 2.43
5027 7009 7.707624 ATCTGCCATTTTGACTCAGATAAAA 57.292 32.000 0.00 0.00 41.22 1.52
5028 7010 8.806429 TTATCTGCCATTTTGACTCAGATAAA 57.194 30.769 16.13 5.17 45.76 1.40
5029 7011 7.500227 CCTTATCTGCCATTTTGACTCAGATAA 59.500 37.037 16.98 16.98 46.17 1.75
5030 7012 6.994496 CCTTATCTGCCATTTTGACTCAGATA 59.006 38.462 6.25 6.25 42.47 1.98
5031 7013 5.826737 CCTTATCTGCCATTTTGACTCAGAT 59.173 40.000 7.95 7.95 44.09 2.90
5032 7014 5.188434 CCTTATCTGCCATTTTGACTCAGA 58.812 41.667 0.00 0.00 38.05 3.27
5033 7015 4.201990 GCCTTATCTGCCATTTTGACTCAG 60.202 45.833 0.00 0.00 0.00 3.35
5034 7016 3.696051 GCCTTATCTGCCATTTTGACTCA 59.304 43.478 0.00 0.00 0.00 3.41
5035 7017 3.696051 TGCCTTATCTGCCATTTTGACTC 59.304 43.478 0.00 0.00 0.00 3.36
5117 7099 5.600898 ACCAAGCAGTTACCAATAAAGGTTT 59.399 36.000 0.00 0.00 43.08 3.27
5336 7319 4.334443 CACAACTGCACGCTAATTGATAC 58.666 43.478 7.25 0.00 0.00 2.24
5481 7464 9.546428 TTAGTTAAAACCAACTTCCAGTACTAC 57.454 33.333 0.00 0.00 39.45 2.73
5510 7493 2.102578 TGGGTAAGTAGAACTACGGGC 58.897 52.381 6.37 1.77 40.80 6.13
5585 7568 1.597854 CGGCAACACAGAGCAGGAA 60.598 57.895 0.00 0.00 0.00 3.36
5777 7760 3.190118 GTCTTCAGCAGGATTTGTCAAGG 59.810 47.826 0.00 0.00 0.00 3.61
5848 7831 1.829222 TGGTAGCAGGCAGTAAGGTAC 59.171 52.381 0.00 0.00 35.97 3.34
5856 7839 1.474077 GTTCCAAATGGTAGCAGGCAG 59.526 52.381 0.00 0.00 36.34 4.85
5978 7961 7.840342 TGTAGGTTTACACACGTCTTAAAAA 57.160 32.000 0.00 0.00 34.91 1.94
5991 7974 5.590663 TCAGTTGTGCAATTGTAGGTTTACA 59.409 36.000 7.40 0.00 38.00 2.41
6164 8147 5.536161 TGGATTCTTCCTTGAACTGGAAAAG 59.464 40.000 0.00 0.00 42.29 2.27
6212 8195 4.143052 CGCCTTTTTGGATCAAAATCTTGC 60.143 41.667 6.64 0.00 41.89 4.01
6825 8809 0.951558 CCGGTACATAAGCATTGCCC 59.048 55.000 4.70 0.00 0.00 5.36
6913 8918 5.187772 TGCTACCATTCAGTTAGACACTCAT 59.812 40.000 0.00 0.00 30.92 2.90
6950 8955 1.838568 GCAAAGGCAAAAGCAGCAGC 61.839 55.000 0.00 0.00 40.72 5.25
7066 9084 7.891825 ATGATAGTAGGAGGTAGGAACTAGA 57.108 40.000 0.00 0.00 44.14 2.43
7078 9096 5.540337 TCACTTGCCCTAATGATAGTAGGAG 59.460 44.000 4.06 0.00 40.67 3.69
7161 9182 6.039382 ACACTTAACAAAACAAGATCCAGGTC 59.961 38.462 0.00 0.00 0.00 3.85
7173 9194 9.783256 AGAAATTGTACTCACACTTAACAAAAC 57.217 29.630 0.00 0.00 34.08 2.43
7305 9335 5.072055 CCTCAAAATGGAAATTTTGCCCTT 58.928 37.500 15.70 0.00 45.90 3.95
7399 9431 2.307980 AGTAAAAGTAGGGAAGTGGGGC 59.692 50.000 0.00 0.00 0.00 5.80
7427 9459 4.249661 CTCAGTTTCCTAAGACTTGCCTC 58.750 47.826 0.00 0.00 0.00 4.70
7473 9505 5.582665 GCTGGCTATACTATTAACCATGCTC 59.417 44.000 0.00 0.00 0.00 4.26
7474 9506 5.249393 AGCTGGCTATACTATTAACCATGCT 59.751 40.000 0.00 0.00 31.38 3.79
7475 9507 5.352569 CAGCTGGCTATACTATTAACCATGC 59.647 44.000 5.57 0.00 0.00 4.06
7476 9508 5.352569 GCAGCTGGCTATACTATTAACCATG 59.647 44.000 17.12 0.00 40.25 3.66
7477 9509 5.491982 GCAGCTGGCTATACTATTAACCAT 58.508 41.667 17.12 0.00 40.25 3.55
7478 9510 4.894784 GCAGCTGGCTATACTATTAACCA 58.105 43.478 17.12 0.00 40.25 3.67
7503 9535 1.876156 GACATGGCACTGGCTTATAGC 59.124 52.381 3.97 0.00 41.46 2.97
7504 9536 3.198409 TGACATGGCACTGGCTTATAG 57.802 47.619 0.00 0.00 40.87 1.31
7505 9537 3.392285 AGATGACATGGCACTGGCTTATA 59.608 43.478 1.45 0.00 40.87 0.98
7506 9538 2.174210 AGATGACATGGCACTGGCTTAT 59.826 45.455 1.45 0.00 40.87 1.73
7507 9539 1.561076 AGATGACATGGCACTGGCTTA 59.439 47.619 1.45 0.00 40.87 3.09
7508 9540 0.330604 AGATGACATGGCACTGGCTT 59.669 50.000 1.45 0.00 40.87 4.35
7509 9541 1.134280 GTAGATGACATGGCACTGGCT 60.134 52.381 1.45 1.41 40.87 4.75
7510 9542 1.303309 GTAGATGACATGGCACTGGC 58.697 55.000 1.45 0.00 40.13 4.85
7511 9543 2.558378 CTGTAGATGACATGGCACTGG 58.442 52.381 1.45 0.00 37.45 4.00
7512 9544 1.938577 GCTGTAGATGACATGGCACTG 59.061 52.381 1.45 0.00 37.45 3.66
7513 9545 1.134280 GGCTGTAGATGACATGGCACT 60.134 52.381 1.45 6.11 37.45 4.40
7514 9546 1.303309 GGCTGTAGATGACATGGCAC 58.697 55.000 1.45 0.00 37.45 5.01
7515 9547 0.181114 GGGCTGTAGATGACATGGCA 59.819 55.000 2.18 2.18 37.45 4.92
7516 9548 0.181114 TGGGCTGTAGATGACATGGC 59.819 55.000 0.00 0.00 37.45 4.40
7517 9549 2.371179 AGATGGGCTGTAGATGACATGG 59.629 50.000 0.00 0.00 37.45 3.66
7518 9550 3.766068 AGATGGGCTGTAGATGACATG 57.234 47.619 0.00 0.00 37.45 3.21
7519 9551 6.155910 CCTATAAGATGGGCTGTAGATGACAT 59.844 42.308 0.00 0.00 37.45 3.06
7520 9552 5.481824 CCTATAAGATGGGCTGTAGATGACA 59.518 44.000 0.00 0.00 36.35 3.58
7521 9553 5.971763 CCTATAAGATGGGCTGTAGATGAC 58.028 45.833 0.00 0.00 0.00 3.06
7542 9574 9.845740 TTTGATGTACTATTATACATGTTGCCT 57.154 29.630 2.30 0.00 44.14 4.75
7582 9614 5.544176 TGAAAGGTGGGCCACATAATAAAAA 59.456 36.000 35.69 10.35 35.86 1.94
7583 9615 5.087323 TGAAAGGTGGGCCACATAATAAAA 58.913 37.500 35.69 11.39 35.86 1.52
7584 9616 4.678256 TGAAAGGTGGGCCACATAATAAA 58.322 39.130 35.69 13.51 35.86 1.40
7585 9617 4.323569 TGAAAGGTGGGCCACATAATAA 57.676 40.909 35.69 13.98 35.86 1.40
7586 9618 4.534647 ATGAAAGGTGGGCCACATAATA 57.465 40.909 35.69 19.38 35.86 0.98
7587 9619 2.917713 TGAAAGGTGGGCCACATAAT 57.082 45.000 35.69 22.42 35.86 1.28
7588 9620 2.917713 ATGAAAGGTGGGCCACATAA 57.082 45.000 35.69 19.62 35.86 1.90
7589 9621 2.311542 AGAATGAAAGGTGGGCCACATA 59.688 45.455 35.69 16.77 35.86 2.29
7590 9622 1.077663 AGAATGAAAGGTGGGCCACAT 59.922 47.619 35.69 28.70 35.86 3.21
7591 9623 0.482446 AGAATGAAAGGTGGGCCACA 59.518 50.000 35.69 17.39 35.86 4.17
7592 9624 1.177401 GAGAATGAAAGGTGGGCCAC 58.823 55.000 28.69 28.69 37.19 5.01
7593 9625 0.776810 TGAGAATGAAAGGTGGGCCA 59.223 50.000 0.00 0.00 37.19 5.36
7594 9626 1.177401 GTGAGAATGAAAGGTGGGCC 58.823 55.000 0.00 0.00 0.00 5.80
7595 9627 1.909700 TGTGAGAATGAAAGGTGGGC 58.090 50.000 0.00 0.00 0.00 5.36
7596 9628 3.891366 ACTTTGTGAGAATGAAAGGTGGG 59.109 43.478 0.00 0.00 0.00 4.61
7597 9629 4.794003 GCACTTTGTGAGAATGAAAGGTGG 60.794 45.833 1.52 0.00 35.23 4.61
7598 9630 4.293415 GCACTTTGTGAGAATGAAAGGTG 58.707 43.478 1.52 0.00 35.23 4.00
7599 9631 3.319122 GGCACTTTGTGAGAATGAAAGGT 59.681 43.478 1.52 0.00 35.23 3.50
7600 9632 3.571401 AGGCACTTTGTGAGAATGAAAGG 59.429 43.478 1.52 0.00 35.23 3.11
7601 9633 4.843220 AGGCACTTTGTGAGAATGAAAG 57.157 40.909 1.52 0.00 35.23 2.62
7602 9634 4.761739 CCTAGGCACTTTGTGAGAATGAAA 59.238 41.667 0.00 0.00 41.75 2.69
7603 9635 4.041567 TCCTAGGCACTTTGTGAGAATGAA 59.958 41.667 2.96 0.00 41.75 2.57
7604 9636 3.582647 TCCTAGGCACTTTGTGAGAATGA 59.417 43.478 2.96 0.00 41.75 2.57
7605 9637 3.937706 CTCCTAGGCACTTTGTGAGAATG 59.062 47.826 2.96 0.00 41.75 2.67
7606 9638 3.620966 GCTCCTAGGCACTTTGTGAGAAT 60.621 47.826 2.96 0.00 41.75 2.40
7607 9639 2.289694 GCTCCTAGGCACTTTGTGAGAA 60.290 50.000 2.96 0.00 41.75 2.87
7608 9640 1.276421 GCTCCTAGGCACTTTGTGAGA 59.724 52.381 2.96 0.00 41.75 3.27
7609 9641 1.002430 TGCTCCTAGGCACTTTGTGAG 59.998 52.381 2.96 0.00 41.75 3.51
7610 9642 1.055849 TGCTCCTAGGCACTTTGTGA 58.944 50.000 2.96 0.00 41.75 3.58
7611 9643 3.631453 TGCTCCTAGGCACTTTGTG 57.369 52.632 2.96 0.00 41.75 3.33
7627 9659 3.191539 GCCAGCTCTAGCACGTGC 61.192 66.667 32.79 32.79 45.16 5.34
7628 9660 1.518133 GAGCCAGCTCTAGCACGTG 60.518 63.158 12.28 12.28 45.16 4.49
7629 9661 2.888863 GAGCCAGCTCTAGCACGT 59.111 61.111 12.42 0.00 45.16 4.49
7637 9669 0.244994 TCTTCGTGAAGAGCCAGCTC 59.755 55.000 11.78 11.78 42.06 4.09
7638 9670 2.355946 TCTTCGTGAAGAGCCAGCT 58.644 52.632 8.19 0.00 42.06 4.24
7639 9671 4.996976 TCTTCGTGAAGAGCCAGC 57.003 55.556 8.19 0.00 42.06 4.85
7645 9677 1.816863 AAGCGGGCTCTTCGTGAAGA 61.817 55.000 11.54 11.54 44.47 2.87
7646 9678 0.108804 TAAGCGGGCTCTTCGTGAAG 60.109 55.000 3.17 3.17 39.71 3.02
7647 9679 0.389426 GTAAGCGGGCTCTTCGTGAA 60.389 55.000 0.00 0.00 0.00 3.18
7648 9680 1.214589 GTAAGCGGGCTCTTCGTGA 59.785 57.895 0.00 0.00 0.00 4.35
7649 9681 1.810030 GGTAAGCGGGCTCTTCGTG 60.810 63.158 0.00 0.00 0.00 4.35
7650 9682 1.542187 AAGGTAAGCGGGCTCTTCGT 61.542 55.000 0.00 0.00 0.00 3.85
7651 9683 0.806492 GAAGGTAAGCGGGCTCTTCG 60.806 60.000 0.00 0.00 0.00 3.79
7652 9684 0.537653 AGAAGGTAAGCGGGCTCTTC 59.462 55.000 10.83 10.83 35.41 2.87
7653 9685 0.537653 GAGAAGGTAAGCGGGCTCTT 59.462 55.000 0.00 0.00 0.00 2.85
7654 9686 0.324830 AGAGAAGGTAAGCGGGCTCT 60.325 55.000 0.00 0.00 0.00 4.09
7655 9687 0.103390 GAGAGAAGGTAAGCGGGCTC 59.897 60.000 0.00 0.00 0.00 4.70
7656 9688 0.324830 AGAGAGAAGGTAAGCGGGCT 60.325 55.000 0.00 0.00 0.00 5.19
7657 9689 0.103390 GAGAGAGAAGGTAAGCGGGC 59.897 60.000 0.00 0.00 0.00 6.13
7658 9690 0.747852 GGAGAGAGAAGGTAAGCGGG 59.252 60.000 0.00 0.00 0.00 6.13
7659 9691 1.679153 GAGGAGAGAGAAGGTAAGCGG 59.321 57.143 0.00 0.00 0.00 5.52
7660 9692 2.650322 AGAGGAGAGAGAAGGTAAGCG 58.350 52.381 0.00 0.00 0.00 4.68
7661 9693 4.278310 AGAAGAGGAGAGAGAAGGTAAGC 58.722 47.826 0.00 0.00 0.00 3.09
7662 9694 5.755849 AGAGAAGAGGAGAGAGAAGGTAAG 58.244 45.833 0.00 0.00 0.00 2.34
7663 9695 5.789574 AGAGAAGAGGAGAGAGAAGGTAA 57.210 43.478 0.00 0.00 0.00 2.85
7664 9696 5.789574 AAGAGAAGAGGAGAGAGAAGGTA 57.210 43.478 0.00 0.00 0.00 3.08
7665 9697 4.675063 AAGAGAAGAGGAGAGAGAAGGT 57.325 45.455 0.00 0.00 0.00 3.50
7666 9698 4.402474 GGAAAGAGAAGAGGAGAGAGAAGG 59.598 50.000 0.00 0.00 0.00 3.46
7667 9699 5.264395 AGGAAAGAGAAGAGGAGAGAGAAG 58.736 45.833 0.00 0.00 0.00 2.85
7668 9700 5.261216 GAGGAAAGAGAAGAGGAGAGAGAA 58.739 45.833 0.00 0.00 0.00 2.87
7669 9701 4.325030 GGAGGAAAGAGAAGAGGAGAGAGA 60.325 50.000 0.00 0.00 0.00 3.10
7670 9702 3.954258 GGAGGAAAGAGAAGAGGAGAGAG 59.046 52.174 0.00 0.00 0.00 3.20
7671 9703 3.335183 TGGAGGAAAGAGAAGAGGAGAGA 59.665 47.826 0.00 0.00 0.00 3.10
7672 9704 3.707316 TGGAGGAAAGAGAAGAGGAGAG 58.293 50.000 0.00 0.00 0.00 3.20
7673 9705 3.835395 GTTGGAGGAAAGAGAAGAGGAGA 59.165 47.826 0.00 0.00 0.00 3.71
7674 9706 3.837731 AGTTGGAGGAAAGAGAAGAGGAG 59.162 47.826 0.00 0.00 0.00 3.69
7675 9707 3.863086 AGTTGGAGGAAAGAGAAGAGGA 58.137 45.455 0.00 0.00 0.00 3.71
7676 9708 5.729510 CTTAGTTGGAGGAAAGAGAAGAGG 58.270 45.833 0.00 0.00 0.00 3.69
7677 9709 5.175127 GCTTAGTTGGAGGAAAGAGAAGAG 58.825 45.833 0.00 0.00 0.00 2.85
7678 9710 4.593206 TGCTTAGTTGGAGGAAAGAGAAGA 59.407 41.667 0.00 0.00 0.00 2.87
7679 9711 4.899502 TGCTTAGTTGGAGGAAAGAGAAG 58.100 43.478 0.00 0.00 0.00 2.85
7680 9712 4.593206 TCTGCTTAGTTGGAGGAAAGAGAA 59.407 41.667 0.00 0.00 0.00 2.87
7681 9713 4.160329 TCTGCTTAGTTGGAGGAAAGAGA 58.840 43.478 0.00 0.00 0.00 3.10
7682 9714 4.543590 TCTGCTTAGTTGGAGGAAAGAG 57.456 45.455 0.00 0.00 0.00 2.85
7683 9715 4.974645 TTCTGCTTAGTTGGAGGAAAGA 57.025 40.909 0.00 0.00 0.00 2.52
7684 9716 7.872113 ATATTTCTGCTTAGTTGGAGGAAAG 57.128 36.000 0.00 0.00 0.00 2.62
7685 9717 8.548877 AGTATATTTCTGCTTAGTTGGAGGAAA 58.451 33.333 0.00 0.00 0.00 3.13
7686 9718 8.090788 AGTATATTTCTGCTTAGTTGGAGGAA 57.909 34.615 0.00 0.00 0.00 3.36
7687 9719 7.676683 AGTATATTTCTGCTTAGTTGGAGGA 57.323 36.000 0.00 0.00 0.00 3.71
7688 9720 8.643324 ACTAGTATATTTCTGCTTAGTTGGAGG 58.357 37.037 0.00 0.00 0.00 4.30
7706 9738 8.689972 GCGGGCTATAAGGAATAAACTAGTATA 58.310 37.037 0.00 0.00 0.00 1.47
7707 9739 7.399478 AGCGGGCTATAAGGAATAAACTAGTAT 59.601 37.037 0.00 0.00 0.00 2.12
7708 9740 6.723052 AGCGGGCTATAAGGAATAAACTAGTA 59.277 38.462 0.00 0.00 0.00 1.82
7709 9741 5.543020 AGCGGGCTATAAGGAATAAACTAGT 59.457 40.000 0.00 0.00 0.00 2.57
7710 9742 5.869888 CAGCGGGCTATAAGGAATAAACTAG 59.130 44.000 0.00 0.00 0.00 2.57
7711 9743 5.541101 TCAGCGGGCTATAAGGAATAAACTA 59.459 40.000 0.00 0.00 0.00 2.24
7712 9744 4.347000 TCAGCGGGCTATAAGGAATAAACT 59.653 41.667 0.00 0.00 0.00 2.66
7713 9745 4.451435 GTCAGCGGGCTATAAGGAATAAAC 59.549 45.833 0.00 0.00 0.00 2.01
7714 9746 4.347000 AGTCAGCGGGCTATAAGGAATAAA 59.653 41.667 0.00 0.00 0.00 1.40
7715 9747 3.901844 AGTCAGCGGGCTATAAGGAATAA 59.098 43.478 0.00 0.00 0.00 1.40
7716 9748 3.507411 AGTCAGCGGGCTATAAGGAATA 58.493 45.455 0.00 0.00 0.00 1.75
7717 9749 2.300437 GAGTCAGCGGGCTATAAGGAAT 59.700 50.000 0.00 0.00 0.00 3.01
7718 9750 1.687123 GAGTCAGCGGGCTATAAGGAA 59.313 52.381 0.00 0.00 0.00 3.36
7719 9751 1.329256 GAGTCAGCGGGCTATAAGGA 58.671 55.000 0.00 0.00 0.00 3.36
7720 9752 1.000283 CTGAGTCAGCGGGCTATAAGG 60.000 57.143 7.33 0.00 0.00 2.69
7721 9753 2.430546 CTGAGTCAGCGGGCTATAAG 57.569 55.000 7.33 0.00 0.00 1.73
7732 9764 6.980593 AGCAAGTATAATAGAGCTGAGTCAG 58.019 40.000 16.21 16.21 34.12 3.51
7733 9765 6.775142 AGAGCAAGTATAATAGAGCTGAGTCA 59.225 38.462 0.00 0.00 31.61 3.41
7734 9766 7.214467 AGAGCAAGTATAATAGAGCTGAGTC 57.786 40.000 0.00 0.00 31.61 3.36
7735 9767 8.698973 TTAGAGCAAGTATAATAGAGCTGAGT 57.301 34.615 0.00 0.00 31.61 3.41
7736 9768 9.571810 CATTAGAGCAAGTATAATAGAGCTGAG 57.428 37.037 0.00 0.00 31.61 3.35
7737 9769 8.526978 CCATTAGAGCAAGTATAATAGAGCTGA 58.473 37.037 0.00 0.00 31.61 4.26
7738 9770 7.277539 GCCATTAGAGCAAGTATAATAGAGCTG 59.722 40.741 0.00 0.00 31.61 4.24
7739 9771 7.038729 TGCCATTAGAGCAAGTATAATAGAGCT 60.039 37.037 0.00 0.00 37.28 4.09
7740 9772 7.064016 GTGCCATTAGAGCAAGTATAATAGAGC 59.936 40.741 0.00 0.00 43.02 4.09
7741 9773 8.090831 TGTGCCATTAGAGCAAGTATAATAGAG 58.909 37.037 0.00 0.00 43.02 2.43
7742 9774 7.962441 TGTGCCATTAGAGCAAGTATAATAGA 58.038 34.615 0.00 0.00 43.02 1.98
7743 9775 8.499162 GTTGTGCCATTAGAGCAAGTATAATAG 58.501 37.037 0.00 0.00 43.02 1.73
7744 9776 8.210946 AGTTGTGCCATTAGAGCAAGTATAATA 58.789 33.333 0.00 0.00 43.02 0.98
7745 9777 7.012704 CAGTTGTGCCATTAGAGCAAGTATAAT 59.987 37.037 0.00 0.00 43.02 1.28
7746 9778 6.316140 CAGTTGTGCCATTAGAGCAAGTATAA 59.684 38.462 0.00 0.00 43.02 0.98
7747 9779 5.817296 CAGTTGTGCCATTAGAGCAAGTATA 59.183 40.000 0.00 0.00 43.02 1.47
7748 9780 4.637534 CAGTTGTGCCATTAGAGCAAGTAT 59.362 41.667 0.00 0.00 43.02 2.12
7749 9781 4.002982 CAGTTGTGCCATTAGAGCAAGTA 58.997 43.478 0.00 0.00 43.02 2.24
7750 9782 2.816087 CAGTTGTGCCATTAGAGCAAGT 59.184 45.455 0.00 0.00 43.02 3.16
7751 9783 2.163010 CCAGTTGTGCCATTAGAGCAAG 59.837 50.000 0.00 0.00 43.02 4.01
7752 9784 2.161855 CCAGTTGTGCCATTAGAGCAA 58.838 47.619 0.00 0.00 43.02 3.91
7753 9785 1.614051 CCCAGTTGTGCCATTAGAGCA 60.614 52.381 0.00 0.00 38.08 4.26
7754 9786 1.098050 CCCAGTTGTGCCATTAGAGC 58.902 55.000 0.00 0.00 0.00 4.09
7755 9787 1.098050 GCCCAGTTGTGCCATTAGAG 58.902 55.000 0.00 0.00 0.00 2.43
7756 9788 0.676466 CGCCCAGTTGTGCCATTAGA 60.676 55.000 0.00 0.00 0.00 2.10
7757 9789 1.656818 CCGCCCAGTTGTGCCATTAG 61.657 60.000 0.00 0.00 0.00 1.73
7758 9790 1.677300 CCGCCCAGTTGTGCCATTA 60.677 57.895 0.00 0.00 0.00 1.90
7759 9791 2.990967 CCGCCCAGTTGTGCCATT 60.991 61.111 0.00 0.00 0.00 3.16
7760 9792 4.284550 ACCGCCCAGTTGTGCCAT 62.285 61.111 0.00 0.00 0.00 4.40
7787 9819 5.107065 CCGCTTTCTACTTTTACTCCAACAG 60.107 44.000 0.00 0.00 0.00 3.16
7801 9833 1.244816 AACTTTGCCCCGCTTTCTAC 58.755 50.000 0.00 0.00 0.00 2.59
7805 9837 1.343142 CCTTAAACTTTGCCCCGCTTT 59.657 47.619 0.00 0.00 0.00 3.51
7806 9838 0.966179 CCTTAAACTTTGCCCCGCTT 59.034 50.000 0.00 0.00 0.00 4.68
7808 9840 0.896479 TCCCTTAAACTTTGCCCCGC 60.896 55.000 0.00 0.00 0.00 6.13
7809 9841 1.847328 ATCCCTTAAACTTTGCCCCG 58.153 50.000 0.00 0.00 0.00 5.73
7854 9887 1.201429 AGGGAGATGTGGGCGAGTTT 61.201 55.000 0.00 0.00 0.00 2.66
7855 9888 1.613630 AGGGAGATGTGGGCGAGTT 60.614 57.895 0.00 0.00 0.00 3.01
7856 9889 2.039624 AGGGAGATGTGGGCGAGT 59.960 61.111 0.00 0.00 0.00 4.18
7857 9890 2.801631 GGAGGGAGATGTGGGCGAG 61.802 68.421 0.00 0.00 0.00 5.03
7858 9891 2.764128 GGAGGGAGATGTGGGCGA 60.764 66.667 0.00 0.00 0.00 5.54
7859 9892 3.866582 GGGAGGGAGATGTGGGCG 61.867 72.222 0.00 0.00 0.00 6.13
7860 9893 2.367512 AGGGAGGGAGATGTGGGC 60.368 66.667 0.00 0.00 0.00 5.36
7861 9894 0.621571 TTGAGGGAGGGAGATGTGGG 60.622 60.000 0.00 0.00 0.00 4.61
7862 9895 1.289160 TTTGAGGGAGGGAGATGTGG 58.711 55.000 0.00 0.00 0.00 4.17
7863 9896 2.573462 TCTTTTGAGGGAGGGAGATGTG 59.427 50.000 0.00 0.00 0.00 3.21
7864 9897 2.921221 TCTTTTGAGGGAGGGAGATGT 58.079 47.619 0.00 0.00 0.00 3.06
7865 9898 4.307032 TTTCTTTTGAGGGAGGGAGATG 57.693 45.455 0.00 0.00 0.00 2.90
7866 9899 5.339423 TTTTTCTTTTGAGGGAGGGAGAT 57.661 39.130 0.00 0.00 0.00 2.75
7867 9900 4.806952 TTTTTCTTTTGAGGGAGGGAGA 57.193 40.909 0.00 0.00 0.00 3.71
7887 9920 1.534729 GGAGATGTGGGCGAGTTTTT 58.465 50.000 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.