Multiple sequence alignment - TraesCS2D01G438700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G438700 chr2D 100.000 6115 0 0 1 6115 548080372 548074258 0.000000e+00 11293.0
1 TraesCS2D01G438700 chr2D 97.115 104 3 0 2003 2106 107204180 107204077 6.300000e-40 176.0
2 TraesCS2D01G438700 chr2D 84.496 129 19 1 22 149 628842919 628843047 6.430000e-25 126.0
3 TraesCS2D01G438700 chr2D 97.561 41 0 1 4947 4987 548075389 548075350 1.100000e-07 69.4
4 TraesCS2D01G438700 chr2D 97.561 41 0 1 4984 5023 548075426 548075386 1.100000e-07 69.4
5 TraesCS2D01G438700 chr2B 96.913 2235 51 7 3582 5802 655006391 655004161 0.000000e+00 3729.0
6 TraesCS2D01G438700 chr2B 88.583 1708 98 44 381 2008 655009615 655007925 0.000000e+00 1984.0
7 TraesCS2D01G438700 chr2B 97.328 973 25 1 2100 3072 655007928 655006957 0.000000e+00 1652.0
8 TraesCS2D01G438700 chr2B 97.241 435 9 1 3069 3500 655006828 655006394 0.000000e+00 734.0
9 TraesCS2D01G438700 chr2B 88.000 150 12 5 5967 6115 655004156 655004012 8.150000e-39 172.0
10 TraesCS2D01G438700 chr2B 96.078 102 4 0 2005 2106 25123328 25123227 3.790000e-37 167.0
11 TraesCS2D01G438700 chr2B 97.561 41 0 1 4984 5023 655005018 655004978 1.100000e-07 69.4
12 TraesCS2D01G438700 chr2B 95.122 41 1 1 4947 4987 655004981 655004942 5.120000e-06 63.9
13 TraesCS2D01G438700 chr2A 93.785 1448 68 7 3582 5023 690933493 690934924 0.000000e+00 2156.0
14 TraesCS2D01G438700 chr2A 90.876 1655 79 29 396 2008 690930486 690932110 0.000000e+00 2154.0
15 TraesCS2D01G438700 chr2A 96.005 876 32 3 2100 2973 690932107 690932981 0.000000e+00 1421.0
16 TraesCS2D01G438700 chr2A 96.096 666 22 3 4951 5615 690934888 690935550 0.000000e+00 1083.0
17 TraesCS2D01G438700 chr2A 88.488 443 32 9 3063 3499 690933064 690933493 9.090000e-143 518.0
18 TraesCS2D01G438700 chr2A 92.929 198 14 0 5605 5802 690947455 690947652 7.760000e-74 289.0
19 TraesCS2D01G438700 chr2A 91.379 174 13 2 5799 5970 189021000 189020827 2.850000e-58 237.0
20 TraesCS2D01G438700 chr2A 90.854 164 10 2 228 386 690930172 690930335 1.330000e-51 215.0
21 TraesCS2D01G438700 chr2A 90.000 150 11 3 5966 6115 690947656 690947801 2.250000e-44 191.0
22 TraesCS2D01G438700 chr2A 90.741 108 10 0 37 144 43474684 43474577 1.780000e-30 145.0
23 TraesCS2D01G438700 chr2A 87.826 115 13 1 36 150 24058744 24058857 3.850000e-27 134.0
24 TraesCS2D01G438700 chr2A 91.667 60 4 1 134 192 67537657 67537598 1.410000e-11 82.4
25 TraesCS2D01G438700 chr2A 97.561 41 0 1 4947 4987 690934921 690934960 1.100000e-07 69.4
26 TraesCS2D01G438700 chr2A 100.000 35 0 0 6 40 690930020 690930054 1.420000e-06 65.8
27 TraesCS2D01G438700 chr3D 96.319 163 6 0 5801 5963 395050301 395050139 1.010000e-67 268.0
28 TraesCS2D01G438700 chr3D 96.154 104 4 0 2003 2106 495531507 495531610 2.930000e-38 171.0
29 TraesCS2D01G438700 chr3D 88.889 90 10 0 3498 3587 515667223 515667312 1.800000e-20 111.0
30 TraesCS2D01G438700 chr4D 93.293 164 11 0 5800 5963 484111763 484111926 6.120000e-60 243.0
31 TraesCS2D01G438700 chr4D 93.750 112 7 0 1995 2106 230489650 230489539 1.050000e-37 169.0
32 TraesCS2D01G438700 chr4D 91.667 60 3 2 141 199 484680110 484680168 1.410000e-11 82.4
33 TraesCS2D01G438700 chr6D 91.765 170 14 0 5797 5966 204160183 204160014 2.850000e-58 237.0
34 TraesCS2D01G438700 chr6D 91.566 83 7 0 3498 3580 71537424 71537506 1.390000e-21 115.0
35 TraesCS2D01G438700 chr6D 92.308 52 2 2 141 191 307116567 307116617 8.500000e-09 73.1
36 TraesCS2D01G438700 chr5D 92.593 162 12 0 5801 5962 151671548 151671709 3.690000e-57 233.0
37 TraesCS2D01G438700 chr5D 89.157 83 9 0 3498 3580 256458043 256458125 3.010000e-18 104.0
38 TraesCS2D01G438700 chr3B 92.121 165 13 0 5798 5962 37969297 37969133 3.690000e-57 233.0
39 TraesCS2D01G438700 chr3B 94.783 115 4 2 1993 2105 99666440 99666554 1.750000e-40 178.0
40 TraesCS2D01G438700 chr6B 91.667 168 13 1 5796 5962 88842514 88842347 1.330000e-56 231.0
41 TraesCS2D01G438700 chr6B 92.105 114 9 0 2000 2113 622020081 622019968 1.760000e-35 161.0
42 TraesCS2D01G438700 chr6B 92.771 83 6 0 3498 3580 146149348 146149430 2.990000e-23 121.0
43 TraesCS2D01G438700 chr3A 90.698 172 16 0 5794 5965 10289580 10289409 4.770000e-56 230.0
44 TraesCS2D01G438700 chr3A 89.831 177 16 2 5801 5976 41428983 41428808 6.170000e-55 226.0
45 TraesCS2D01G438700 chr3A 94.595 111 5 1 1998 2107 648863038 648862928 2.930000e-38 171.0
46 TraesCS2D01G438700 chr7D 96.117 103 4 0 2001 2103 407261307 407261205 1.050000e-37 169.0
47 TraesCS2D01G438700 chr7D 90.598 117 10 1 37 153 65601659 65601774 2.950000e-33 154.0
48 TraesCS2D01G438700 chr7D 88.889 81 9 0 3497 3577 62184444 62184364 3.900000e-17 100.0
49 TraesCS2D01G438700 chr1B 95.238 105 5 0 2004 2108 647184780 647184884 3.790000e-37 167.0
50 TraesCS2D01G438700 chr1B 89.908 109 9 2 36 144 151741781 151741887 8.270000e-29 139.0
51 TraesCS2D01G438700 chr1B 90.588 85 8 0 3496 3580 332083787 332083871 5.010000e-21 113.0
52 TraesCS2D01G438700 chr1D 91.818 110 9 0 36 145 392141086 392140977 2.950000e-33 154.0
53 TraesCS2D01G438700 chr1D 93.023 43 2 1 148 189 433370328 433370286 1.840000e-05 62.1
54 TraesCS2D01G438700 chr4B 90.566 106 8 2 36 140 110240586 110240482 8.270000e-29 139.0
55 TraesCS2D01G438700 chrUn 88.991 109 12 0 36 144 86621758 86621866 1.070000e-27 135.0
56 TraesCS2D01G438700 chr7B 88.393 112 13 0 37 148 452211913 452211802 1.070000e-27 135.0
57 TraesCS2D01G438700 chr6A 92.771 83 6 0 3498 3580 88080304 88080386 2.990000e-23 121.0
58 TraesCS2D01G438700 chr5B 92.771 83 6 0 3498 3580 187046448 187046366 2.990000e-23 121.0
59 TraesCS2D01G438700 chr5A 92.771 83 6 0 3498 3580 185649702 185649784 2.990000e-23 121.0
60 TraesCS2D01G438700 chr4A 94.737 38 2 0 3766 3803 596536834 596536871 6.620000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G438700 chr2D 548074258 548080372 6114 True 11293.000000 11293 100.000000 1 6115 1 chr2D.!!$R2 6114
1 TraesCS2D01G438700 chr2B 655004012 655009615 5603 True 1200.614286 3729 94.392571 381 6115 7 chr2B.!!$R2 5734
2 TraesCS2D01G438700 chr2A 690930020 690935550 5530 False 960.275000 2156 94.208125 6 5615 8 chr2A.!!$F2 5609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
462 656 0.248458 GTGCGTTGGTTGGTTCAGTG 60.248 55.000 0.0 0.0 0.00 3.66 F
1032 1285 0.395311 AGGCCTTCGATCAGACCGTA 60.395 55.000 0.0 0.0 0.00 4.02 F
1552 1836 0.172578 TACCGAATGCACTCCTCACG 59.827 55.000 0.0 0.0 0.00 4.35 F
3028 3315 0.474184 CCAGTGGGATATGGTGGGTC 59.526 60.000 0.0 0.0 35.59 4.46 F
3508 3932 4.039973 TGTTTTGACGAATACTCCCTCTGT 59.960 41.667 0.0 0.0 0.00 3.41 F
3880 4304 0.103937 CTGCCGAGGTGGATCTTCTC 59.896 60.000 0.0 0.0 42.00 2.87 F
4838 5271 0.313987 CCTCGCCCTTTTGGAAACAC 59.686 55.000 0.0 0.0 44.07 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1385 1662 1.556911 CCCTGAAGCACTAGTGTGGAT 59.443 52.381 23.44 7.99 43.97 3.41 R
2004 2289 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73 R
3427 3851 4.206477 ACATGCATTCAGTACTACAGCA 57.794 40.909 12.04 12.04 34.78 4.41 R
3880 4304 0.457035 CATCCATCAAGTTTGGGCCG 59.543 55.000 0.00 0.00 34.85 6.13 R
4818 5251 0.825840 TGTTTCCAAAAGGGCGAGGG 60.826 55.000 0.00 0.00 36.21 4.30 R
5057 5517 1.078918 CAAGCTCTCGATGCCACCA 60.079 57.895 6.89 0.00 0.00 4.17 R
5965 6431 0.179225 CCACGACAACTACGCAATGC 60.179 55.000 0.00 0.00 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.121738 ACAACTTTTGTACTCCCTCCG 57.878 47.619 0.00 0.00 43.27 4.63
47 48 2.436911 ACAACTTTTGTACTCCCTCCGT 59.563 45.455 0.00 0.00 43.27 4.69
48 49 3.118149 ACAACTTTTGTACTCCCTCCGTT 60.118 43.478 0.00 0.00 43.27 4.44
49 50 3.397849 ACTTTTGTACTCCCTCCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
50 51 2.038164 ACTTTTGTACTCCCTCCGTTCC 59.962 50.000 0.00 0.00 0.00 3.62
51 52 2.019807 TTTGTACTCCCTCCGTTCCT 57.980 50.000 0.00 0.00 0.00 3.36
52 53 2.019807 TTGTACTCCCTCCGTTCCTT 57.980 50.000 0.00 0.00 0.00 3.36
53 54 2.019807 TGTACTCCCTCCGTTCCTTT 57.980 50.000 0.00 0.00 0.00 3.11
54 55 2.332117 TGTACTCCCTCCGTTCCTTTT 58.668 47.619 0.00 0.00 0.00 2.27
55 56 2.707257 TGTACTCCCTCCGTTCCTTTTT 59.293 45.455 0.00 0.00 0.00 1.94
56 57 3.903090 TGTACTCCCTCCGTTCCTTTTTA 59.097 43.478 0.00 0.00 0.00 1.52
57 58 3.413846 ACTCCCTCCGTTCCTTTTTAC 57.586 47.619 0.00 0.00 0.00 2.01
58 59 2.707257 ACTCCCTCCGTTCCTTTTTACA 59.293 45.455 0.00 0.00 0.00 2.41
59 60 3.136992 ACTCCCTCCGTTCCTTTTTACAA 59.863 43.478 0.00 0.00 0.00 2.41
60 61 3.746940 TCCCTCCGTTCCTTTTTACAAG 58.253 45.455 0.00 0.00 0.00 3.16
61 62 3.391955 TCCCTCCGTTCCTTTTTACAAGA 59.608 43.478 0.00 0.00 0.00 3.02
62 63 4.042435 TCCCTCCGTTCCTTTTTACAAGAT 59.958 41.667 0.00 0.00 0.00 2.40
63 64 4.156008 CCCTCCGTTCCTTTTTACAAGATG 59.844 45.833 0.00 0.00 0.00 2.90
64 65 4.760204 CCTCCGTTCCTTTTTACAAGATGT 59.240 41.667 0.00 0.00 0.00 3.06
65 66 5.240844 CCTCCGTTCCTTTTTACAAGATGTT 59.759 40.000 0.00 0.00 0.00 2.71
66 67 6.238925 CCTCCGTTCCTTTTTACAAGATGTTT 60.239 38.462 0.00 0.00 0.00 2.83
67 68 7.102847 TCCGTTCCTTTTTACAAGATGTTTT 57.897 32.000 0.00 0.00 0.00 2.43
68 69 8.223177 TCCGTTCCTTTTTACAAGATGTTTTA 57.777 30.769 0.00 0.00 0.00 1.52
69 70 8.347035 TCCGTTCCTTTTTACAAGATGTTTTAG 58.653 33.333 0.00 0.00 0.00 1.85
70 71 8.347035 CCGTTCCTTTTTACAAGATGTTTTAGA 58.653 33.333 0.00 0.00 0.00 2.10
71 72 9.166126 CGTTCCTTTTTACAAGATGTTTTAGAC 57.834 33.333 0.00 0.00 0.00 2.59
74 75 8.349983 TCCTTTTTACAAGATGTTTTAGACAGC 58.650 33.333 0.00 0.00 44.92 4.40
83 84 6.072112 GATGTTTTAGACAGCTGGTTTTGA 57.928 37.500 19.93 0.00 42.62 2.69
84 85 5.906113 TGTTTTAGACAGCTGGTTTTGAA 57.094 34.783 19.93 2.70 33.40 2.69
85 86 5.646606 TGTTTTAGACAGCTGGTTTTGAAC 58.353 37.500 19.93 14.76 33.40 3.18
86 87 5.417580 TGTTTTAGACAGCTGGTTTTGAACT 59.582 36.000 19.93 6.45 33.40 3.01
87 88 5.499139 TTTAGACAGCTGGTTTTGAACTG 57.501 39.130 19.93 0.00 0.00 3.16
88 89 3.004752 AGACAGCTGGTTTTGAACTGT 57.995 42.857 19.93 0.00 43.93 3.55
89 90 3.356290 AGACAGCTGGTTTTGAACTGTT 58.644 40.909 19.93 0.00 41.45 3.16
90 91 3.763897 AGACAGCTGGTTTTGAACTGTTT 59.236 39.130 19.93 0.00 41.45 2.83
91 92 4.220602 AGACAGCTGGTTTTGAACTGTTTT 59.779 37.500 19.93 0.00 41.45 2.43
92 93 4.244862 ACAGCTGGTTTTGAACTGTTTTG 58.755 39.130 19.93 0.00 38.38 2.44
93 94 3.618150 CAGCTGGTTTTGAACTGTTTTGG 59.382 43.478 5.57 0.00 0.00 3.28
94 95 2.935849 GCTGGTTTTGAACTGTTTTGGG 59.064 45.455 0.00 0.00 0.00 4.12
95 96 3.368948 GCTGGTTTTGAACTGTTTTGGGA 60.369 43.478 0.00 0.00 0.00 4.37
96 97 4.432712 CTGGTTTTGAACTGTTTTGGGAG 58.567 43.478 0.00 0.00 0.00 4.30
97 98 3.194861 GGTTTTGAACTGTTTTGGGAGC 58.805 45.455 0.00 0.00 0.00 4.70
98 99 3.118775 GGTTTTGAACTGTTTTGGGAGCT 60.119 43.478 0.00 0.00 0.00 4.09
99 100 3.799281 TTTGAACTGTTTTGGGAGCTG 57.201 42.857 0.00 0.00 0.00 4.24
100 101 2.435372 TGAACTGTTTTGGGAGCTGT 57.565 45.000 0.00 0.00 0.00 4.40
101 102 2.733956 TGAACTGTTTTGGGAGCTGTT 58.266 42.857 0.00 0.00 0.00 3.16
102 103 3.096092 TGAACTGTTTTGGGAGCTGTTT 58.904 40.909 0.00 0.00 0.00 2.83
103 104 3.119173 TGAACTGTTTTGGGAGCTGTTTG 60.119 43.478 0.00 0.00 0.00 2.93
104 105 2.733956 ACTGTTTTGGGAGCTGTTTGA 58.266 42.857 0.00 0.00 0.00 2.69
105 106 3.096092 ACTGTTTTGGGAGCTGTTTGAA 58.904 40.909 0.00 0.00 0.00 2.69
106 107 3.119137 ACTGTTTTGGGAGCTGTTTGAAC 60.119 43.478 0.00 0.00 0.00 3.18
107 108 3.096092 TGTTTTGGGAGCTGTTTGAACT 58.904 40.909 0.00 0.00 0.00 3.01
108 109 3.513515 TGTTTTGGGAGCTGTTTGAACTT 59.486 39.130 0.00 0.00 0.00 2.66
109 110 4.020662 TGTTTTGGGAGCTGTTTGAACTTT 60.021 37.500 0.00 0.00 0.00 2.66
110 111 4.385358 TTTGGGAGCTGTTTGAACTTTC 57.615 40.909 0.00 0.00 0.00 2.62
111 112 3.297134 TGGGAGCTGTTTGAACTTTCT 57.703 42.857 0.00 0.00 0.00 2.52
112 113 4.431416 TGGGAGCTGTTTGAACTTTCTA 57.569 40.909 0.00 0.00 0.00 2.10
113 114 4.787551 TGGGAGCTGTTTGAACTTTCTAA 58.212 39.130 0.00 0.00 0.00 2.10
114 115 5.197451 TGGGAGCTGTTTGAACTTTCTAAA 58.803 37.500 0.00 0.00 0.00 1.85
115 116 5.654650 TGGGAGCTGTTTGAACTTTCTAAAA 59.345 36.000 0.00 0.00 0.00 1.52
116 117 5.977725 GGGAGCTGTTTGAACTTTCTAAAAC 59.022 40.000 0.00 0.00 33.98 2.43
117 118 5.681543 GGAGCTGTTTGAACTTTCTAAAACG 59.318 40.000 0.00 0.00 35.71 3.60
118 119 6.190954 AGCTGTTTGAACTTTCTAAAACGT 57.809 33.333 0.00 0.00 35.71 3.99
119 120 6.255950 AGCTGTTTGAACTTTCTAAAACGTC 58.744 36.000 0.00 0.00 35.71 4.34
120 121 6.093633 AGCTGTTTGAACTTTCTAAAACGTCT 59.906 34.615 0.00 0.00 35.71 4.18
121 122 6.745907 GCTGTTTGAACTTTCTAAAACGTCTT 59.254 34.615 0.00 0.00 35.71 3.01
122 123 7.906527 GCTGTTTGAACTTTCTAAAACGTCTTA 59.093 33.333 0.00 0.00 35.71 2.10
123 124 9.931210 CTGTTTGAACTTTCTAAAACGTCTTAT 57.069 29.630 0.00 0.00 35.71 1.73
138 139 7.653767 AACGTCTTATAAAAGTGAACAGAGG 57.346 36.000 0.00 0.00 34.13 3.69
139 140 6.164176 ACGTCTTATAAAAGTGAACAGAGGG 58.836 40.000 0.00 0.00 34.13 4.30
140 141 6.014840 ACGTCTTATAAAAGTGAACAGAGGGA 60.015 38.462 0.00 0.00 34.13 4.20
141 142 6.531948 CGTCTTATAAAAGTGAACAGAGGGAG 59.468 42.308 0.00 0.00 34.13 4.30
142 143 7.387643 GTCTTATAAAAGTGAACAGAGGGAGT 58.612 38.462 0.00 0.00 34.13 3.85
143 144 8.529476 GTCTTATAAAAGTGAACAGAGGGAGTA 58.471 37.037 0.00 0.00 34.13 2.59
144 145 8.529476 TCTTATAAAAGTGAACAGAGGGAGTAC 58.471 37.037 0.00 0.00 34.13 2.73
145 146 6.936968 ATAAAAGTGAACAGAGGGAGTACT 57.063 37.500 0.00 0.00 0.00 2.73
181 182 7.748691 AAAGCTGCAACAATTAATTTGGATT 57.251 28.000 1.02 0.00 39.80 3.01
192 194 9.492730 ACAATTAATTTGGATTGAGGGAGTATT 57.507 29.630 12.85 0.00 39.80 1.89
220 237 7.757941 TTTATGGTCTCAAAATCATGTGTCA 57.242 32.000 0.00 0.00 0.00 3.58
221 238 7.757941 TTATGGTCTCAAAATCATGTGTCAA 57.242 32.000 0.00 0.00 0.00 3.18
222 239 5.437289 TGGTCTCAAAATCATGTGTCAAC 57.563 39.130 0.00 0.00 0.00 3.18
223 240 4.886489 TGGTCTCAAAATCATGTGTCAACA 59.114 37.500 0.00 0.00 41.58 3.33
224 241 5.359292 TGGTCTCAAAATCATGTGTCAACAA 59.641 36.000 0.00 0.00 40.46 2.83
225 242 5.687285 GGTCTCAAAATCATGTGTCAACAAC 59.313 40.000 0.00 0.00 40.46 3.32
226 243 6.460123 GGTCTCAAAATCATGTGTCAACAACT 60.460 38.462 0.00 0.00 40.46 3.16
261 298 6.463995 TTGTAGCTTTTGATGTTTCCTGTT 57.536 33.333 0.00 0.00 0.00 3.16
267 304 4.916983 TTTGATGTTTCCTGTTGACTGG 57.083 40.909 0.99 0.99 36.43 4.00
268 305 2.229792 TGATGTTTCCTGTTGACTGGC 58.770 47.619 2.47 0.00 35.24 4.85
313 350 0.884514 GGAGGTGCTTCTCTTTTGGC 59.115 55.000 6.79 0.00 34.39 4.52
344 381 2.924105 GCAGCTTGAAGCCACCACC 61.924 63.158 14.45 0.00 43.77 4.61
345 382 1.529010 CAGCTTGAAGCCACCACCA 60.529 57.895 14.45 0.00 43.77 4.17
347 384 1.529244 GCTTGAAGCCACCACCACT 60.529 57.895 5.74 0.00 34.48 4.00
348 385 0.250727 GCTTGAAGCCACCACCACTA 60.251 55.000 5.74 0.00 34.48 2.74
350 387 2.795329 CTTGAAGCCACCACCACTATT 58.205 47.619 0.00 0.00 0.00 1.73
356 398 4.584638 AGCCACCACCACTATTTTATGA 57.415 40.909 0.00 0.00 0.00 2.15
358 400 4.889409 AGCCACCACCACTATTTTATGATG 59.111 41.667 0.00 0.00 0.00 3.07
361 403 6.320164 GCCACCACCACTATTTTATGATGTTA 59.680 38.462 0.00 0.00 0.00 2.41
387 429 3.367321 TCTCGGGTCATACATGTACCAA 58.633 45.455 16.32 4.96 32.90 3.67
449 643 4.630894 TTCAGTCAAAGAAATGTGCGTT 57.369 36.364 0.00 0.00 0.00 4.84
462 656 0.248458 GTGCGTTGGTTGGTTCAGTG 60.248 55.000 0.00 0.00 0.00 3.66
506 712 3.120199 CCGATCAGATCACAACCAAACAC 60.120 47.826 11.12 0.00 0.00 3.32
634 847 2.158959 CGTGGTGCTACTAGTGCGC 61.159 63.158 17.29 17.29 39.88 6.09
734 959 3.575247 ACCGGCCATCACCACCAA 61.575 61.111 0.00 0.00 0.00 3.67
735 960 2.751436 CCGGCCATCACCACCAAG 60.751 66.667 2.24 0.00 0.00 3.61
736 961 2.034066 CGGCCATCACCACCAAGT 59.966 61.111 2.24 0.00 0.00 3.16
737 962 2.334946 CGGCCATCACCACCAAGTG 61.335 63.158 2.24 0.00 39.20 3.16
975 1228 1.340795 CCCGCTATATAGAGTCCCCGT 60.341 57.143 14.16 0.00 0.00 5.28
1032 1285 0.395311 AGGCCTTCGATCAGACCGTA 60.395 55.000 0.00 0.00 0.00 4.02
1033 1286 0.458669 GGCCTTCGATCAGACCGTAA 59.541 55.000 0.00 0.00 0.00 3.18
1097 1350 3.029320 TCTCGCTAGCCGTTTTACAAA 57.971 42.857 9.66 0.00 38.35 2.83
1103 1360 3.549221 GCTAGCCGTTTTACAAAGTTGCA 60.549 43.478 2.29 0.00 0.00 4.08
1159 1419 3.667429 GATCCGTTTGCTGTGCGCC 62.667 63.158 4.18 0.00 38.05 6.53
1225 1485 0.809385 CCGAGCTCGAACAGAAGGTA 59.191 55.000 36.59 0.00 43.02 3.08
1254 1514 1.270252 GCCCAGATCTTAGCTCTGCTC 60.270 57.143 7.50 0.00 40.44 4.26
1284 1544 1.534163 GTTGTTTCCTCTTGCCGGTAC 59.466 52.381 1.90 0.00 0.00 3.34
1362 1639 2.083167 TTTTGCCTATGCTTGCTTGC 57.917 45.000 0.00 0.00 38.71 4.01
1385 1662 4.557895 CGATACCACTGTTGTCTGTACACA 60.558 45.833 0.00 0.00 34.61 3.72
1401 1683 3.045601 ACACATCCACACTAGTGCTTC 57.954 47.619 22.90 0.00 44.53 3.86
1403 1685 2.998670 CACATCCACACTAGTGCTTCAG 59.001 50.000 22.90 12.43 44.53 3.02
1436 1720 9.567776 TGATAAATGTTGTAACTTTTCAGGAGA 57.432 29.630 10.64 0.00 37.43 3.71
1495 1779 4.371786 TCTGCGCTGATGGTTTAGATAAG 58.628 43.478 13.46 0.00 0.00 1.73
1499 1783 5.522460 TGCGCTGATGGTTTAGATAAGTTAC 59.478 40.000 9.73 0.00 0.00 2.50
1524 1808 4.608269 AGACCTGAATCAGAGATCAGTCA 58.392 43.478 12.53 0.00 41.16 3.41
1552 1836 0.172578 TACCGAATGCACTCCTCACG 59.827 55.000 0.00 0.00 0.00 4.35
1599 1883 2.149578 GGCTGGATTCCTCGATGATTG 58.850 52.381 3.95 0.00 0.00 2.67
1623 1907 5.737635 GCATTTAGAGCTAGAAGTCCGATGT 60.738 44.000 0.00 0.00 0.00 3.06
1629 1913 3.511934 AGCTAGAAGTCCGATGTGAAGTT 59.488 43.478 0.00 0.00 0.00 2.66
1681 1965 8.972262 TCTCTCATTGTATCATATTTCGTAGC 57.028 34.615 0.00 0.00 0.00 3.58
1856 2140 3.019564 CCTCCCTTTTTATCAGTGCTGG 58.980 50.000 0.00 0.00 0.00 4.85
2000 2285 8.575736 TCTTATTCCCTAATGACCATCCTTTA 57.424 34.615 0.00 0.00 0.00 1.85
2005 2290 9.813826 ATTCCCTAATGACCATCCTTTAAATAG 57.186 33.333 0.00 0.00 0.00 1.73
2006 2291 8.344939 TCCCTAATGACCATCCTTTAAATAGT 57.655 34.615 0.00 0.00 0.00 2.12
2007 2292 9.455144 TCCCTAATGACCATCCTTTAAATAGTA 57.545 33.333 0.00 0.00 0.00 1.82
2008 2293 9.503399 CCCTAATGACCATCCTTTAAATAGTAC 57.497 37.037 0.00 0.00 0.00 2.73
2012 2297 7.133133 TGACCATCCTTTAAATAGTACTCCC 57.867 40.000 0.00 0.00 0.00 4.30
2013 2298 6.906901 TGACCATCCTTTAAATAGTACTCCCT 59.093 38.462 0.00 0.00 0.00 4.20
2014 2299 7.070821 TGACCATCCTTTAAATAGTACTCCCTC 59.929 40.741 0.00 0.00 0.00 4.30
2015 2300 6.329460 ACCATCCTTTAAATAGTACTCCCTCC 59.671 42.308 0.00 0.00 0.00 4.30
2016 2301 6.456501 CATCCTTTAAATAGTACTCCCTCCG 58.543 44.000 0.00 0.00 0.00 4.63
2017 2302 5.522641 TCCTTTAAATAGTACTCCCTCCGT 58.477 41.667 0.00 0.00 0.00 4.69
2018 2303 5.960202 TCCTTTAAATAGTACTCCCTCCGTT 59.040 40.000 0.00 0.00 0.00 4.44
2019 2304 6.097412 TCCTTTAAATAGTACTCCCTCCGTTC 59.903 42.308 0.00 0.00 0.00 3.95
2020 2305 5.859205 TTAAATAGTACTCCCTCCGTTCC 57.141 43.478 0.00 0.00 0.00 3.62
2021 2306 3.393426 AATAGTACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
2022 2307 2.905415 TAGTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
2023 2308 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
2024 2309 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
2025 2310 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
2026 2311 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
2027 2312 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2028 2313 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2029 2314 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2030 2315 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2031 2316 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2032 2317 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2033 2318 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
2034 2319 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
2035 2320 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
2036 2321 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
2037 2322 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
2038 2323 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
2039 2324 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
2040 2325 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
2041 2326 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
2042 2327 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
2043 2328 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
2044 2329 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
2045 2330 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
2046 2331 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
2047 2332 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
2048 2333 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
2049 2334 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
2050 2335 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
2051 2336 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
2052 2337 8.434392 AGATGACCCAACTTTGTACTAACTTTA 58.566 33.333 0.00 0.00 0.00 1.85
2053 2338 9.227777 GATGACCCAACTTTGTACTAACTTTAT 57.772 33.333 0.00 0.00 0.00 1.40
2054 2339 8.385898 TGACCCAACTTTGTACTAACTTTATG 57.614 34.615 0.00 0.00 0.00 1.90
2055 2340 7.040961 TGACCCAACTTTGTACTAACTTTATGC 60.041 37.037 0.00 0.00 0.00 3.14
2056 2341 7.002276 ACCCAACTTTGTACTAACTTTATGCT 58.998 34.615 0.00 0.00 0.00 3.79
2057 2342 8.158789 ACCCAACTTTGTACTAACTTTATGCTA 58.841 33.333 0.00 0.00 0.00 3.49
2058 2343 9.005777 CCCAACTTTGTACTAACTTTATGCTAA 57.994 33.333 0.00 0.00 0.00 3.09
2079 2364 9.332502 TGCTAAAGTTAATACAAAGTTGAGTCA 57.667 29.630 0.00 0.00 0.00 3.41
2090 2375 9.739276 ATACAAAGTTGAGTCATCTATTTTGGA 57.261 29.630 14.35 9.09 40.00 3.53
2091 2376 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
2092 2377 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
2093 2378 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
2094 2379 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2095 2380 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2096 2381 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2097 2382 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2098 2383 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2176 2461 4.279922 ACATTAACCAGTAACCACCAAAGC 59.720 41.667 0.00 0.00 0.00 3.51
2194 2479 5.507315 CCAAAGCGAAACAGACCTTTGTATT 60.507 40.000 10.05 0.00 41.38 1.89
2349 2634 2.626266 TCTCGGTATGTGTTGTCTGTGT 59.374 45.455 0.00 0.00 0.00 3.72
2354 2639 5.816258 TCGGTATGTGTTGTCTGTGTTTTTA 59.184 36.000 0.00 0.00 0.00 1.52
2391 2676 2.161211 AGTTAAGGCTACGTCGAGTGAC 59.839 50.000 0.00 0.00 41.91 3.67
2407 2692 7.407337 GTCGAGTGACTAAACATTTTCTTGTT 58.593 34.615 0.00 0.00 42.08 2.83
2585 2870 4.082787 ACAAGTGGGTTCTGCGAAATTATG 60.083 41.667 0.00 0.00 0.00 1.90
2977 3264 9.471702 ACAGCCAGTAGTATTTTACTAAGAGTA 57.528 33.333 0.00 0.00 42.45 2.59
3028 3315 0.474184 CCAGTGGGATATGGTGGGTC 59.526 60.000 0.00 0.00 35.59 4.46
3258 3678 7.515643 CCGGGCTTATCTTTTATTGTTATACG 58.484 38.462 0.00 0.00 0.00 3.06
3412 3836 6.959639 TTTCCTGGTTATGCTATTTCCATC 57.040 37.500 0.00 0.00 0.00 3.51
3427 3851 8.043113 GCTATTTCCATCCAAGGAATTTCTTTT 58.957 33.333 0.00 0.00 46.45 2.27
3468 3892 6.862608 GCATGTTCATGTCTTGACATGTAAAA 59.137 34.615 30.66 22.08 45.53 1.52
3502 3926 7.591006 TCTGTAATGTTTTGACGAATACTCC 57.409 36.000 0.00 0.00 0.00 3.85
3503 3927 6.592607 TCTGTAATGTTTTGACGAATACTCCC 59.407 38.462 0.00 0.00 0.00 4.30
3504 3928 6.469410 TGTAATGTTTTGACGAATACTCCCT 58.531 36.000 0.00 0.00 0.00 4.20
3505 3929 6.592607 TGTAATGTTTTGACGAATACTCCCTC 59.407 38.462 0.00 0.00 0.00 4.30
3506 3930 4.884668 TGTTTTGACGAATACTCCCTCT 57.115 40.909 0.00 0.00 0.00 3.69
3507 3931 4.566004 TGTTTTGACGAATACTCCCTCTG 58.434 43.478 0.00 0.00 0.00 3.35
3508 3932 4.039973 TGTTTTGACGAATACTCCCTCTGT 59.960 41.667 0.00 0.00 0.00 3.41
3509 3933 5.244402 TGTTTTGACGAATACTCCCTCTGTA 59.756 40.000 0.00 0.00 0.00 2.74
3510 3934 5.988310 TTTGACGAATACTCCCTCTGTAA 57.012 39.130 0.00 0.00 0.00 2.41
3511 3935 5.988310 TTGACGAATACTCCCTCTGTAAA 57.012 39.130 0.00 0.00 0.00 2.01
3512 3936 5.320549 TGACGAATACTCCCTCTGTAAAC 57.679 43.478 0.00 0.00 0.00 2.01
3513 3937 4.768448 TGACGAATACTCCCTCTGTAAACA 59.232 41.667 0.00 0.00 0.00 2.83
3514 3938 5.244402 TGACGAATACTCCCTCTGTAAACAA 59.756 40.000 0.00 0.00 0.00 2.83
3515 3939 6.105397 ACGAATACTCCCTCTGTAAACAAA 57.895 37.500 0.00 0.00 0.00 2.83
3516 3940 6.708285 ACGAATACTCCCTCTGTAAACAAAT 58.292 36.000 0.00 0.00 0.00 2.32
3517 3941 7.844009 ACGAATACTCCCTCTGTAAACAAATA 58.156 34.615 0.00 0.00 0.00 1.40
3518 3942 8.483758 ACGAATACTCCCTCTGTAAACAAATAT 58.516 33.333 0.00 0.00 0.00 1.28
3519 3943 9.976511 CGAATACTCCCTCTGTAAACAAATATA 57.023 33.333 0.00 0.00 0.00 0.86
3544 3968 8.600449 AAGATCTTTTAGAGACTTGACACAAG 57.400 34.615 0.88 9.51 37.17 3.16
3545 3969 7.731054 AGATCTTTTAGAGACTTGACACAAGT 58.269 34.615 15.46 15.46 37.17 3.16
3546 3970 7.870445 AGATCTTTTAGAGACTTGACACAAGTC 59.130 37.037 26.82 26.82 45.21 3.01
3555 3979 5.964070 GACTTGACACAAGTCTCTAAAACG 58.036 41.667 26.82 0.00 45.20 3.60
3556 3980 5.416947 ACTTGACACAAGTCTCTAAAACGT 58.583 37.500 10.73 0.00 45.20 3.99
3557 3981 5.519206 ACTTGACACAAGTCTCTAAAACGTC 59.481 40.000 10.73 0.00 45.20 4.34
3558 3982 5.258456 TGACACAAGTCTCTAAAACGTCT 57.742 39.130 0.00 0.00 45.20 4.18
3559 3983 5.657474 TGACACAAGTCTCTAAAACGTCTT 58.343 37.500 0.00 0.00 45.20 3.01
3560 3984 6.798482 TGACACAAGTCTCTAAAACGTCTTA 58.202 36.000 0.00 0.00 45.20 2.10
3561 3985 7.431249 TGACACAAGTCTCTAAAACGTCTTAT 58.569 34.615 0.00 0.00 45.20 1.73
3562 3986 8.570488 TGACACAAGTCTCTAAAACGTCTTATA 58.430 33.333 0.00 0.00 45.20 0.98
3563 3987 9.570488 GACACAAGTCTCTAAAACGTCTTATAT 57.430 33.333 0.00 0.00 41.64 0.86
3564 3988 9.924650 ACACAAGTCTCTAAAACGTCTTATATT 57.075 29.630 0.00 0.00 0.00 1.28
3577 4001 8.488651 AACGTCTTATATTTGTTTACAGAGGG 57.511 34.615 0.00 0.00 0.00 4.30
3578 4002 7.844009 ACGTCTTATATTTGTTTACAGAGGGA 58.156 34.615 0.00 0.00 0.00 4.20
3579 4003 7.980099 ACGTCTTATATTTGTTTACAGAGGGAG 59.020 37.037 0.00 0.00 0.00 4.30
3580 4004 7.042658 CGTCTTATATTTGTTTACAGAGGGAGC 60.043 40.741 0.00 0.00 0.00 4.70
3673 4097 8.045176 ACATTCTCTTCTGCCTAATTGTAAAC 57.955 34.615 0.00 0.00 0.00 2.01
3880 4304 0.103937 CTGCCGAGGTGGATCTTCTC 59.896 60.000 0.00 0.00 42.00 2.87
4259 4692 2.039746 CACCACAGACTGGGTTTATCCA 59.960 50.000 7.51 0.00 45.78 3.41
4428 4861 0.681733 CACCACCTGTACACAGCTCT 59.318 55.000 3.75 0.00 42.47 4.09
4818 5251 4.680975 CGTAAGTTCCTCCTCTCATTTCCC 60.681 50.000 0.00 0.00 0.00 3.97
4828 5261 1.926426 CTCATTTCCCCCTCGCCCTT 61.926 60.000 0.00 0.00 0.00 3.95
4837 5270 0.825840 CCCTCGCCCTTTTGGAAACA 60.826 55.000 0.00 0.00 44.07 2.83
4838 5271 0.313987 CCTCGCCCTTTTGGAAACAC 59.686 55.000 0.00 0.00 44.07 3.32
5057 5517 0.896940 TTCCTCCGACTACGCAAGGT 60.897 55.000 0.00 0.00 46.39 3.50
5155 5615 0.684153 AGCACCTGGTGTTTGTTGCT 60.684 50.000 26.48 13.65 35.75 3.91
5245 5707 4.202010 ACCGTCACATTGCTTATAATTGCC 60.202 41.667 0.00 0.00 0.00 4.52
5285 5747 2.354821 GGTCTTTGTCCAGTGTTGTCAC 59.645 50.000 0.00 0.00 44.15 3.67
5304 5766 1.470494 ACGCATGTGTTGTGTTTGTCA 59.530 42.857 5.96 0.00 46.85 3.58
5338 5800 0.877071 CTGCCCTTGTGTCACATCAC 59.123 55.000 6.48 0.00 38.63 3.06
5470 5936 2.489329 ACTTCGGAAACCATCAGCATTG 59.511 45.455 0.00 0.00 0.00 2.82
5529 5995 1.641878 CCGTTTTATGCAAAAGCGTCG 59.358 47.619 20.06 7.04 34.34 5.12
5541 6007 2.450609 AAGCGTCGGAACACTAATGT 57.549 45.000 0.00 0.00 42.46 2.71
5603 6069 8.655935 ATTCTGACATTCTACCCTTGATTTTT 57.344 30.769 0.00 0.00 0.00 1.94
5648 6114 4.960938 ACAGAGACAAGACAGCAACATTA 58.039 39.130 0.00 0.00 0.00 1.90
5666 6132 4.444056 ACATTAACGCTTGATTTTGTGTGC 59.556 37.500 0.00 0.00 0.00 4.57
5681 6147 3.832276 TGTGTGCTGTGTGAAAGAAAAC 58.168 40.909 0.00 0.00 0.00 2.43
5684 6150 3.119531 TGTGCTGTGTGAAAGAAAACTGG 60.120 43.478 0.00 0.00 0.00 4.00
5686 6152 2.159254 GCTGTGTGAAAGAAAACTGGCA 60.159 45.455 0.00 0.00 0.00 4.92
5724 6190 1.374252 GCTTCTCTGTTTCGCGGGA 60.374 57.895 6.13 0.00 0.00 5.14
5734 6200 3.659786 TGTTTCGCGGGATAGGAATATG 58.340 45.455 6.13 0.00 0.00 1.78
5810 6276 5.861727 GTTTACTGAAAACTACTCCCTCCA 58.138 41.667 0.00 0.00 43.52 3.86
5812 6278 6.697641 TTACTGAAAACTACTCCCTCCATT 57.302 37.500 0.00 0.00 0.00 3.16
5813 6279 5.167303 ACTGAAAACTACTCCCTCCATTC 57.833 43.478 0.00 0.00 0.00 2.67
5814 6280 4.019231 ACTGAAAACTACTCCCTCCATTCC 60.019 45.833 0.00 0.00 0.00 3.01
5815 6281 4.175962 TGAAAACTACTCCCTCCATTCCT 58.824 43.478 0.00 0.00 0.00 3.36
5816 6282 5.347124 TGAAAACTACTCCCTCCATTCCTA 58.653 41.667 0.00 0.00 0.00 2.94
5817 6283 5.788533 TGAAAACTACTCCCTCCATTCCTAA 59.211 40.000 0.00 0.00 0.00 2.69
5818 6284 6.273730 TGAAAACTACTCCCTCCATTCCTAAA 59.726 38.462 0.00 0.00 0.00 1.85
5819 6285 6.910259 AAACTACTCCCTCCATTCCTAAAT 57.090 37.500 0.00 0.00 0.00 1.40
5820 6286 8.401955 AAAACTACTCCCTCCATTCCTAAATA 57.598 34.615 0.00 0.00 0.00 1.40
5821 6287 8.582891 AAACTACTCCCTCCATTCCTAAATAT 57.417 34.615 0.00 0.00 0.00 1.28
5822 6288 9.684702 AAACTACTCCCTCCATTCCTAAATATA 57.315 33.333 0.00 0.00 0.00 0.86
5823 6289 9.684702 AACTACTCCCTCCATTCCTAAATATAA 57.315 33.333 0.00 0.00 0.00 0.98
5824 6290 9.327731 ACTACTCCCTCCATTCCTAAATATAAG 57.672 37.037 0.00 0.00 0.00 1.73
5825 6291 9.327731 CTACTCCCTCCATTCCTAAATATAAGT 57.672 37.037 0.00 0.00 0.00 2.24
5826 6292 8.208575 ACTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
5827 6293 8.019652 ACTCCCTCCATTCCTAAATATAAGTCT 58.980 37.037 0.00 0.00 0.00 3.24
5828 6294 8.814448 TCCCTCCATTCCTAAATATAAGTCTT 57.186 34.615 0.00 0.00 0.00 3.01
5829 6295 9.237706 TCCCTCCATTCCTAAATATAAGTCTTT 57.762 33.333 0.00 0.00 0.00 2.52
5830 6296 9.289782 CCCTCCATTCCTAAATATAAGTCTTTG 57.710 37.037 0.00 0.00 0.00 2.77
5831 6297 9.289782 CCTCCATTCCTAAATATAAGTCTTTGG 57.710 37.037 0.00 0.00 0.00 3.28
5860 6326 5.977489 TCCACTATGGACCATATACGAAG 57.023 43.478 14.69 6.40 42.67 3.79
5861 6327 4.219944 TCCACTATGGACCATATACGAAGC 59.780 45.833 14.69 0.00 42.67 3.86
5862 6328 4.021456 CCACTATGGACCATATACGAAGCA 60.021 45.833 14.69 0.00 40.96 3.91
5863 6329 5.510690 CCACTATGGACCATATACGAAGCAA 60.511 44.000 14.69 0.00 40.96 3.91
5864 6330 5.989168 CACTATGGACCATATACGAAGCAAA 59.011 40.000 14.69 0.00 0.00 3.68
5865 6331 6.481976 CACTATGGACCATATACGAAGCAAAA 59.518 38.462 14.69 0.00 0.00 2.44
5866 6332 7.173218 CACTATGGACCATATACGAAGCAAAAT 59.827 37.037 14.69 0.00 0.00 1.82
5867 6333 5.749596 TGGACCATATACGAAGCAAAATG 57.250 39.130 0.00 0.00 0.00 2.32
5868 6334 5.432645 TGGACCATATACGAAGCAAAATGA 58.567 37.500 0.00 0.00 0.00 2.57
5869 6335 5.527214 TGGACCATATACGAAGCAAAATGAG 59.473 40.000 0.00 0.00 0.00 2.90
5870 6336 5.527582 GGACCATATACGAAGCAAAATGAGT 59.472 40.000 0.00 0.00 0.00 3.41
5871 6337 6.704493 GGACCATATACGAAGCAAAATGAGTA 59.296 38.462 0.00 0.00 0.00 2.59
5872 6338 7.225931 GGACCATATACGAAGCAAAATGAGTAA 59.774 37.037 0.00 0.00 0.00 2.24
5873 6339 8.500753 ACCATATACGAAGCAAAATGAGTAAA 57.499 30.769 0.00 0.00 0.00 2.01
5874 6340 9.120538 ACCATATACGAAGCAAAATGAGTAAAT 57.879 29.630 0.00 0.00 0.00 1.40
5875 6341 9.599322 CCATATACGAAGCAAAATGAGTAAATC 57.401 33.333 0.00 0.00 0.00 2.17
5876 6342 9.599322 CATATACGAAGCAAAATGAGTAAATCC 57.401 33.333 0.00 0.00 0.00 3.01
5877 6343 5.957842 ACGAAGCAAAATGAGTAAATCCA 57.042 34.783 0.00 0.00 0.00 3.41
5878 6344 6.515272 ACGAAGCAAAATGAGTAAATCCAT 57.485 33.333 0.00 0.00 0.00 3.41
5879 6345 7.624360 ACGAAGCAAAATGAGTAAATCCATA 57.376 32.000 0.00 0.00 0.00 2.74
5880 6346 7.472543 ACGAAGCAAAATGAGTAAATCCATAC 58.527 34.615 0.00 0.00 0.00 2.39
5881 6347 7.336931 ACGAAGCAAAATGAGTAAATCCATACT 59.663 33.333 0.00 0.00 38.81 2.12
5905 6371 8.031864 ACTCTAAAATGCATCTAGATACATCCG 58.968 37.037 17.09 7.74 0.00 4.18
5906 6372 7.896811 TCTAAAATGCATCTAGATACATCCGT 58.103 34.615 17.09 9.18 0.00 4.69
5907 6373 9.020731 TCTAAAATGCATCTAGATACATCCGTA 57.979 33.333 17.09 9.71 0.00 4.02
5908 6374 9.809096 CTAAAATGCATCTAGATACATCCGTAT 57.191 33.333 17.09 0.85 41.16 3.06
5911 6377 9.755804 AAATGCATCTAGATACATCCGTATATG 57.244 33.333 17.09 0.00 38.48 1.78
5912 6378 7.277174 TGCATCTAGATACATCCGTATATGG 57.723 40.000 4.54 4.41 38.48 2.74
5913 6379 7.060421 TGCATCTAGATACATCCGTATATGGA 58.940 38.462 16.13 16.13 39.96 3.41
5914 6380 7.013369 TGCATCTAGATACATCCGTATATGGAC 59.987 40.741 16.12 3.28 38.93 4.02
5915 6381 7.229707 GCATCTAGATACATCCGTATATGGACT 59.770 40.741 16.12 10.48 38.93 3.85
5916 6382 9.780186 CATCTAGATACATCCGTATATGGACTA 57.220 37.037 16.12 11.03 38.93 2.59
5920 6386 8.624367 AGATACATCCGTATATGGACTATAGC 57.376 38.462 16.12 10.98 41.85 2.97
5921 6387 8.218488 AGATACATCCGTATATGGACTATAGCA 58.782 37.037 16.12 0.00 41.85 3.49
5922 6388 8.762481 ATACATCCGTATATGGACTATAGCAA 57.238 34.615 16.12 0.00 41.85 3.91
5923 6389 7.476540 ACATCCGTATATGGACTATAGCAAA 57.523 36.000 16.12 0.00 41.85 3.68
5924 6390 7.903145 ACATCCGTATATGGACTATAGCAAAA 58.097 34.615 16.12 0.00 41.85 2.44
5925 6391 8.540388 ACATCCGTATATGGACTATAGCAAAAT 58.460 33.333 16.12 0.00 41.85 1.82
5926 6392 9.035607 CATCCGTATATGGACTATAGCAAAATC 57.964 37.037 16.12 0.00 41.85 2.17
5927 6393 8.362464 TCCGTATATGGACTATAGCAAAATCT 57.638 34.615 9.78 0.00 31.53 2.40
5928 6394 8.467598 TCCGTATATGGACTATAGCAAAATCTC 58.532 37.037 9.78 0.00 31.53 2.75
5929 6395 8.470805 CCGTATATGGACTATAGCAAAATCTCT 58.529 37.037 4.85 0.00 0.00 3.10
5935 6401 8.948631 TGGACTATAGCAAAATCTCTACAAAG 57.051 34.615 0.00 0.00 0.00 2.77
5936 6402 8.758829 TGGACTATAGCAAAATCTCTACAAAGA 58.241 33.333 0.00 0.00 0.00 2.52
5937 6403 9.036671 GGACTATAGCAAAATCTCTACAAAGAC 57.963 37.037 0.00 0.00 0.00 3.01
5938 6404 9.810545 GACTATAGCAAAATCTCTACAAAGACT 57.189 33.333 0.00 0.00 0.00 3.24
5956 6422 9.379791 ACAAAGACTTATATTTAGGAACGGAAG 57.620 33.333 0.00 0.00 0.00 3.46
5957 6423 8.827677 CAAAGACTTATATTTAGGAACGGAAGG 58.172 37.037 0.00 0.00 0.00 3.46
5958 6424 7.909485 AGACTTATATTTAGGAACGGAAGGA 57.091 36.000 0.00 0.00 0.00 3.36
5959 6425 7.953752 AGACTTATATTTAGGAACGGAAGGAG 58.046 38.462 0.00 0.00 0.00 3.69
5960 6426 7.564292 AGACTTATATTTAGGAACGGAAGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
5961 6427 8.773033 ACTTATATTTAGGAACGGAAGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
5962 6428 8.858094 ACTTATATTTAGGAACGGAAGGAGTAG 58.142 37.037 0.00 0.00 0.00 2.57
5963 6429 9.075678 CTTATATTTAGGAACGGAAGGAGTAGA 57.924 37.037 0.00 0.00 0.00 2.59
5964 6430 9.597681 TTATATTTAGGAACGGAAGGAGTAGAT 57.402 33.333 0.00 0.00 0.00 1.98
5965 6431 5.593679 TTTAGGAACGGAAGGAGTAGATG 57.406 43.478 0.00 0.00 0.00 2.90
5966 6432 1.757699 AGGAACGGAAGGAGTAGATGC 59.242 52.381 0.00 0.00 0.00 3.91
5967 6433 1.480954 GGAACGGAAGGAGTAGATGCA 59.519 52.381 0.00 0.00 0.00 3.96
5968 6434 2.103263 GGAACGGAAGGAGTAGATGCAT 59.897 50.000 0.00 0.00 0.00 3.96
5969 6435 3.432326 GGAACGGAAGGAGTAGATGCATT 60.432 47.826 0.00 0.00 0.00 3.56
5970 6436 3.185246 ACGGAAGGAGTAGATGCATTG 57.815 47.619 0.00 0.00 0.00 2.82
5971 6437 1.869767 CGGAAGGAGTAGATGCATTGC 59.130 52.381 0.00 0.46 0.00 3.56
5972 6438 1.869767 GGAAGGAGTAGATGCATTGCG 59.130 52.381 0.00 0.00 0.00 4.85
5973 6439 2.555199 GAAGGAGTAGATGCATTGCGT 58.445 47.619 2.25 2.25 0.00 5.24
5974 6440 3.492656 GGAAGGAGTAGATGCATTGCGTA 60.493 47.826 0.00 0.00 0.00 4.42
5977 6443 3.133003 AGGAGTAGATGCATTGCGTAGTT 59.867 43.478 0.00 0.00 0.00 2.24
5980 6446 3.865745 AGTAGATGCATTGCGTAGTTGTC 59.134 43.478 0.00 0.00 0.00 3.18
5997 6463 7.529519 CGTAGTTGTCGTGGAAATAAAGAAAAG 59.470 37.037 0.00 0.00 0.00 2.27
6003 6469 9.458374 TGTCGTGGAAATAAAGAAAAGAAAATC 57.542 29.630 0.00 0.00 0.00 2.17
6006 6472 9.463443 CGTGGAAATAAAGAAAAGAAAATCTGT 57.537 29.630 0.00 0.00 0.00 3.41
6064 6531 7.174946 TGAAATTACAGGTAGCAAGAAGGAAAG 59.825 37.037 0.00 0.00 0.00 2.62
6068 6535 3.868077 CAGGTAGCAAGAAGGAAAGATCG 59.132 47.826 0.00 0.00 0.00 3.69
6070 6537 4.710375 AGGTAGCAAGAAGGAAAGATCGTA 59.290 41.667 0.00 0.00 0.00 3.43
6071 6538 4.804665 GGTAGCAAGAAGGAAAGATCGTAC 59.195 45.833 0.00 0.00 0.00 3.67
6073 6540 3.192844 AGCAAGAAGGAAAGATCGTACGA 59.807 43.478 21.93 21.93 0.00 3.43
6083 6550 5.455056 AAAGATCGTACGATAGCAATCCT 57.545 39.130 29.48 17.50 42.67 3.24
6084 6551 6.349115 GGAAAGATCGTACGATAGCAATCCTA 60.349 42.308 29.48 0.00 42.67 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.536554 AGAGAGTTGCGACAATTAACATG 57.463 39.130 6.90 0.00 0.00 3.21
1 2 6.398918 ACTAGAGAGTTGCGACAATTAACAT 58.601 36.000 6.90 0.00 28.61 2.71
2 3 5.779922 ACTAGAGAGTTGCGACAATTAACA 58.220 37.500 6.90 0.00 28.61 2.41
3 4 6.805271 TGTACTAGAGAGTTGCGACAATTAAC 59.195 38.462 6.90 0.00 37.10 2.01
4 5 6.916440 TGTACTAGAGAGTTGCGACAATTAA 58.084 36.000 6.90 0.00 37.10 1.40
40 41 3.746940 TCTTGTAAAAAGGAACGGAGGG 58.253 45.455 0.00 0.00 0.00 4.30
41 42 4.760204 ACATCTTGTAAAAAGGAACGGAGG 59.240 41.667 0.00 0.00 0.00 4.30
42 43 5.941948 ACATCTTGTAAAAAGGAACGGAG 57.058 39.130 0.00 0.00 0.00 4.63
43 44 6.702716 AAACATCTTGTAAAAAGGAACGGA 57.297 33.333 0.00 0.00 0.00 4.69
44 45 8.347035 TCTAAAACATCTTGTAAAAAGGAACGG 58.653 33.333 0.00 0.00 0.00 4.44
45 46 9.166126 GTCTAAAACATCTTGTAAAAAGGAACG 57.834 33.333 0.00 0.00 0.00 3.95
48 49 8.349983 GCTGTCTAAAACATCTTGTAAAAAGGA 58.650 33.333 0.00 0.00 37.23 3.36
49 50 8.352942 AGCTGTCTAAAACATCTTGTAAAAAGG 58.647 33.333 0.00 0.00 37.23 3.11
50 51 9.173939 CAGCTGTCTAAAACATCTTGTAAAAAG 57.826 33.333 5.25 0.00 37.23 2.27
51 52 8.134895 CCAGCTGTCTAAAACATCTTGTAAAAA 58.865 33.333 13.81 0.00 37.23 1.94
52 53 7.284489 ACCAGCTGTCTAAAACATCTTGTAAAA 59.716 33.333 13.81 0.00 37.23 1.52
53 54 6.770785 ACCAGCTGTCTAAAACATCTTGTAAA 59.229 34.615 13.81 0.00 37.23 2.01
54 55 6.296026 ACCAGCTGTCTAAAACATCTTGTAA 58.704 36.000 13.81 0.00 37.23 2.41
55 56 5.865085 ACCAGCTGTCTAAAACATCTTGTA 58.135 37.500 13.81 0.00 37.23 2.41
56 57 4.718961 ACCAGCTGTCTAAAACATCTTGT 58.281 39.130 13.81 0.00 37.23 3.16
57 58 5.695851 AACCAGCTGTCTAAAACATCTTG 57.304 39.130 13.81 0.00 37.23 3.02
58 59 6.321181 TCAAAACCAGCTGTCTAAAACATCTT 59.679 34.615 13.81 0.00 37.23 2.40
59 60 5.827797 TCAAAACCAGCTGTCTAAAACATCT 59.172 36.000 13.81 0.00 37.23 2.90
60 61 6.072112 TCAAAACCAGCTGTCTAAAACATC 57.928 37.500 13.81 0.00 37.23 3.06
61 62 6.096846 AGTTCAAAACCAGCTGTCTAAAACAT 59.903 34.615 13.81 0.00 37.23 2.71
62 63 5.417580 AGTTCAAAACCAGCTGTCTAAAACA 59.582 36.000 13.81 0.00 36.18 2.83
63 64 5.743872 CAGTTCAAAACCAGCTGTCTAAAAC 59.256 40.000 13.81 9.55 0.00 2.43
64 65 5.417580 ACAGTTCAAAACCAGCTGTCTAAAA 59.582 36.000 13.81 0.00 35.78 1.52
65 66 4.947388 ACAGTTCAAAACCAGCTGTCTAAA 59.053 37.500 13.81 0.00 35.78 1.85
66 67 4.523083 ACAGTTCAAAACCAGCTGTCTAA 58.477 39.130 13.81 0.00 35.78 2.10
67 68 4.150897 ACAGTTCAAAACCAGCTGTCTA 57.849 40.909 13.81 0.00 35.78 2.59
68 69 3.004752 ACAGTTCAAAACCAGCTGTCT 57.995 42.857 13.81 0.00 35.78 3.41
69 70 3.782889 AACAGTTCAAAACCAGCTGTC 57.217 42.857 13.81 0.00 39.19 3.51
70 71 4.244862 CAAAACAGTTCAAAACCAGCTGT 58.755 39.130 13.81 0.00 41.51 4.40
71 72 3.618150 CCAAAACAGTTCAAAACCAGCTG 59.382 43.478 6.78 6.78 0.00 4.24
72 73 3.369366 CCCAAAACAGTTCAAAACCAGCT 60.369 43.478 0.00 0.00 0.00 4.24
73 74 2.935849 CCCAAAACAGTTCAAAACCAGC 59.064 45.455 0.00 0.00 0.00 4.85
74 75 4.432712 CTCCCAAAACAGTTCAAAACCAG 58.567 43.478 0.00 0.00 0.00 4.00
75 76 3.368948 GCTCCCAAAACAGTTCAAAACCA 60.369 43.478 0.00 0.00 0.00 3.67
76 77 3.118775 AGCTCCCAAAACAGTTCAAAACC 60.119 43.478 0.00 0.00 0.00 3.27
77 78 3.865164 CAGCTCCCAAAACAGTTCAAAAC 59.135 43.478 0.00 0.00 0.00 2.43
78 79 3.513515 ACAGCTCCCAAAACAGTTCAAAA 59.486 39.130 0.00 0.00 0.00 2.44
79 80 3.096092 ACAGCTCCCAAAACAGTTCAAA 58.904 40.909 0.00 0.00 0.00 2.69
80 81 2.733956 ACAGCTCCCAAAACAGTTCAA 58.266 42.857 0.00 0.00 0.00 2.69
81 82 2.435372 ACAGCTCCCAAAACAGTTCA 57.565 45.000 0.00 0.00 0.00 3.18
82 83 3.130340 TCAAACAGCTCCCAAAACAGTTC 59.870 43.478 0.00 0.00 0.00 3.01
83 84 3.096092 TCAAACAGCTCCCAAAACAGTT 58.904 40.909 0.00 0.00 0.00 3.16
84 85 2.733956 TCAAACAGCTCCCAAAACAGT 58.266 42.857 0.00 0.00 0.00 3.55
85 86 3.131046 AGTTCAAACAGCTCCCAAAACAG 59.869 43.478 0.00 0.00 0.00 3.16
86 87 3.096092 AGTTCAAACAGCTCCCAAAACA 58.904 40.909 0.00 0.00 0.00 2.83
87 88 3.801114 AGTTCAAACAGCTCCCAAAAC 57.199 42.857 0.00 0.00 0.00 2.43
88 89 4.466015 AGAAAGTTCAAACAGCTCCCAAAA 59.534 37.500 0.00 0.00 0.00 2.44
89 90 4.023291 AGAAAGTTCAAACAGCTCCCAAA 58.977 39.130 0.00 0.00 0.00 3.28
90 91 3.631250 AGAAAGTTCAAACAGCTCCCAA 58.369 40.909 0.00 0.00 0.00 4.12
91 92 3.297134 AGAAAGTTCAAACAGCTCCCA 57.703 42.857 0.00 0.00 0.00 4.37
92 93 5.767816 TTTAGAAAGTTCAAACAGCTCCC 57.232 39.130 0.00 0.00 0.00 4.30
93 94 5.681543 CGTTTTAGAAAGTTCAAACAGCTCC 59.318 40.000 7.40 0.00 0.00 4.70
94 95 6.255950 ACGTTTTAGAAAGTTCAAACAGCTC 58.744 36.000 7.40 0.00 0.00 4.09
95 96 6.093633 AGACGTTTTAGAAAGTTCAAACAGCT 59.906 34.615 0.00 0.00 0.00 4.24
96 97 6.255950 AGACGTTTTAGAAAGTTCAAACAGC 58.744 36.000 0.00 0.00 0.00 4.40
97 98 9.931210 ATAAGACGTTTTAGAAAGTTCAAACAG 57.069 29.630 4.75 4.11 0.00 3.16
112 113 8.557029 CCTCTGTTCACTTTTATAAGACGTTTT 58.443 33.333 0.00 0.00 35.30 2.43
113 114 7.172703 CCCTCTGTTCACTTTTATAAGACGTTT 59.827 37.037 0.00 0.00 35.30 3.60
114 115 6.649557 CCCTCTGTTCACTTTTATAAGACGTT 59.350 38.462 0.00 0.00 35.30 3.99
115 116 6.014840 TCCCTCTGTTCACTTTTATAAGACGT 60.015 38.462 0.00 0.00 35.30 4.34
116 117 6.395629 TCCCTCTGTTCACTTTTATAAGACG 58.604 40.000 0.00 0.00 35.30 4.18
117 118 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
118 119 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
119 120 8.532819 AGTACTCCCTCTGTTCACTTTTATAAG 58.467 37.037 0.00 0.00 37.40 1.73
120 121 8.431910 AGTACTCCCTCTGTTCACTTTTATAA 57.568 34.615 0.00 0.00 0.00 0.98
121 122 9.537852 TTAGTACTCCCTCTGTTCACTTTTATA 57.462 33.333 0.00 0.00 0.00 0.98
122 123 6.936968 AGTACTCCCTCTGTTCACTTTTAT 57.063 37.500 0.00 0.00 0.00 1.40
123 124 7.844493 TTAGTACTCCCTCTGTTCACTTTTA 57.156 36.000 0.00 0.00 0.00 1.52
124 125 6.742559 TTAGTACTCCCTCTGTTCACTTTT 57.257 37.500 0.00 0.00 0.00 2.27
125 126 6.326843 ACTTTAGTACTCCCTCTGTTCACTTT 59.673 38.462 0.00 0.00 0.00 2.66
126 127 5.839606 ACTTTAGTACTCCCTCTGTTCACTT 59.160 40.000 0.00 0.00 0.00 3.16
127 128 5.395611 ACTTTAGTACTCCCTCTGTTCACT 58.604 41.667 0.00 0.00 0.00 3.41
128 129 5.725325 ACTTTAGTACTCCCTCTGTTCAC 57.275 43.478 0.00 0.00 0.00 3.18
129 130 5.601313 ACAACTTTAGTACTCCCTCTGTTCA 59.399 40.000 0.00 0.00 0.00 3.18
130 131 6.099159 ACAACTTTAGTACTCCCTCTGTTC 57.901 41.667 0.00 0.00 0.00 3.18
131 132 6.781507 AGTACAACTTTAGTACTCCCTCTGTT 59.218 38.462 0.00 0.00 46.80 3.16
132 133 6.313324 AGTACAACTTTAGTACTCCCTCTGT 58.687 40.000 0.00 1.90 46.80 3.41
133 134 6.837471 AGTACAACTTTAGTACTCCCTCTG 57.163 41.667 0.00 0.00 46.80 3.35
134 135 8.946797 TTTAGTACAACTTTAGTACTCCCTCT 57.053 34.615 9.05 0.00 46.80 3.69
135 136 7.758980 GCTTTAGTACAACTTTAGTACTCCCTC 59.241 40.741 9.05 0.00 46.80 4.30
136 137 7.454066 AGCTTTAGTACAACTTTAGTACTCCCT 59.546 37.037 9.05 0.99 46.80 4.20
137 138 7.544915 CAGCTTTAGTACAACTTTAGTACTCCC 59.455 40.741 9.05 0.00 46.80 4.30
138 139 7.063191 GCAGCTTTAGTACAACTTTAGTACTCC 59.937 40.741 9.05 0.00 46.80 3.85
139 140 7.597743 TGCAGCTTTAGTACAACTTTAGTACTC 59.402 37.037 9.05 0.00 46.80 2.59
141 142 7.647907 TGCAGCTTTAGTACAACTTTAGTAC 57.352 36.000 0.00 0.00 41.59 2.73
142 143 7.711772 TGTTGCAGCTTTAGTACAACTTTAGTA 59.288 33.333 1.17 0.00 40.88 1.82
143 144 6.540914 TGTTGCAGCTTTAGTACAACTTTAGT 59.459 34.615 1.17 0.00 40.88 2.24
144 145 6.954944 TGTTGCAGCTTTAGTACAACTTTAG 58.045 36.000 1.17 0.00 40.88 1.85
145 146 6.928979 TGTTGCAGCTTTAGTACAACTTTA 57.071 33.333 1.17 0.00 40.88 1.85
157 158 7.444792 TCAATCCAAATTAATTGTTGCAGCTTT 59.555 29.630 0.39 0.00 37.32 3.51
194 196 8.637099 TGACACATGATTTTGAGACCATAAAAA 58.363 29.630 0.00 0.00 30.50 1.94
242 279 4.646492 AGTCAACAGGAAACATCAAAAGCT 59.354 37.500 0.00 0.00 0.00 3.74
261 298 1.024271 GTCAACAGCAAAGCCAGTCA 58.976 50.000 0.00 0.00 0.00 3.41
267 304 0.040958 CCTCACGTCAACAGCAAAGC 60.041 55.000 0.00 0.00 0.00 3.51
268 305 0.040958 GCCTCACGTCAACAGCAAAG 60.041 55.000 0.00 0.00 0.00 2.77
329 366 0.250727 TAGTGGTGGTGGCTTCAAGC 60.251 55.000 0.00 0.00 41.46 4.01
331 368 2.969821 AATAGTGGTGGTGGCTTCAA 57.030 45.000 0.00 0.00 0.00 2.69
348 385 8.980481 ACCCGAGAAGAATAACATCATAAAAT 57.020 30.769 0.00 0.00 0.00 1.82
350 387 7.561251 TGACCCGAGAAGAATAACATCATAAA 58.439 34.615 0.00 0.00 0.00 1.40
356 398 6.479972 TGTATGACCCGAGAAGAATAACAT 57.520 37.500 0.00 0.00 0.00 2.71
358 400 6.281405 ACATGTATGACCCGAGAAGAATAAC 58.719 40.000 0.00 0.00 0.00 1.89
361 403 5.221461 GGTACATGTATGACCCGAGAAGAAT 60.221 44.000 9.18 0.00 0.00 2.40
387 429 2.032681 GGTTTGCCACTCCGAGCT 59.967 61.111 0.00 0.00 34.09 4.09
424 608 4.204978 CGCACATTTCTTTGACTGAAACAC 59.795 41.667 0.00 0.00 36.43 3.32
449 643 0.751277 CCACTGCACTGAACCAACCA 60.751 55.000 0.00 0.00 0.00 3.67
462 656 0.038892 CAAACACCATCTGCCACTGC 60.039 55.000 0.00 0.00 38.26 4.40
506 712 3.615614 GCTGCTAATCTGATTTTGCGAG 58.384 45.455 8.38 12.81 0.00 5.03
622 835 2.002127 CTGCAAGCGCACTAGTAGC 58.998 57.895 11.47 12.95 45.36 3.58
651 864 2.024871 CGAGATCTGACGGCCGAC 59.975 66.667 35.90 27.96 0.00 4.79
893 1127 1.273781 TGTGTCTGGATGGGATGGAGA 60.274 52.381 0.00 0.00 0.00 3.71
1032 1285 5.740290 TCGAGAAAACTTACATCTCCCTT 57.260 39.130 0.00 0.00 36.99 3.95
1033 1286 5.450688 CGATCGAGAAAACTTACATCTCCCT 60.451 44.000 10.26 0.00 36.99 4.20
1254 1514 5.278022 GCAAGAGGAAACAACTTTACAGAGG 60.278 44.000 0.00 0.00 0.00 3.69
1284 1544 3.459232 TCCGATAATTCACAGCTCCAG 57.541 47.619 0.00 0.00 0.00 3.86
1362 1639 3.918591 GTGTACAGACAACAGTGGTATCG 59.081 47.826 0.00 0.00 37.31 2.92
1385 1662 1.556911 CCCTGAAGCACTAGTGTGGAT 59.443 52.381 23.44 7.99 43.97 3.41
1401 1683 9.927668 AAGTTACAACATTTATCAATTTCCCTG 57.072 29.630 0.00 0.00 0.00 4.45
1471 1755 3.052455 TCTAAACCATCAGCGCAGAAA 57.948 42.857 11.47 0.00 0.00 2.52
1495 1779 8.001881 TGATCTCTGATTCAGGTCTTAGTAAC 57.998 38.462 13.59 1.75 31.51 2.50
1499 1783 6.320926 TGACTGATCTCTGATTCAGGTCTTAG 59.679 42.308 13.59 9.42 42.93 2.18
1524 1808 4.634443 GGAGTGCATTCGGTAGTGTATTTT 59.366 41.667 2.84 0.00 0.00 1.82
1552 1836 1.796459 CAGGCAAATCAAAAGCAGTGC 59.204 47.619 7.13 7.13 0.00 4.40
1599 1883 4.308899 TCGGACTTCTAGCTCTAAATGC 57.691 45.455 0.00 0.00 0.00 3.56
1623 1907 9.239551 TGACTAGTCTTGTAAGCTATAACTTCA 57.760 33.333 23.01 0.00 0.00 3.02
1815 2099 2.825532 GGTGGGATAGCACAACACAAAT 59.174 45.455 0.00 0.00 34.41 2.32
2000 2285 3.716431 TGGAACGGAGGGAGTACTATTT 58.284 45.455 0.00 0.00 0.00 1.40
2004 2289 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
2005 2290 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
2006 2291 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2007 2292 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2008 2293 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2009 2294 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2010 2295 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2011 2296 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
2012 2297 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
2013 2298 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
2014 2299 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
2015 2300 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
2016 2301 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
2017 2302 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
2018 2303 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
2019 2304 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
2020 2305 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
2021 2306 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
2022 2307 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
2023 2308 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
2024 2309 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
2025 2310 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
2026 2311 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
2027 2312 7.506328 AAAGTTAGTACAAAGTTGGGTCATC 57.494 36.000 0.00 0.00 0.00 2.92
2028 2313 9.010029 CATAAAGTTAGTACAAAGTTGGGTCAT 57.990 33.333 0.00 0.00 0.00 3.06
2029 2314 7.040961 GCATAAAGTTAGTACAAAGTTGGGTCA 60.041 37.037 0.00 0.00 0.00 4.02
2030 2315 7.174426 AGCATAAAGTTAGTACAAAGTTGGGTC 59.826 37.037 0.00 0.00 0.00 4.46
2031 2316 7.002276 AGCATAAAGTTAGTACAAAGTTGGGT 58.998 34.615 0.00 0.00 0.00 4.51
2032 2317 7.448748 AGCATAAAGTTAGTACAAAGTTGGG 57.551 36.000 0.00 0.00 0.00 4.12
2053 2338 9.332502 TGACTCAACTTTGTATTAACTTTAGCA 57.667 29.630 0.00 0.00 0.00 3.49
2064 2349 9.739276 TCCAAAATAGATGACTCAACTTTGTAT 57.261 29.630 0.00 0.00 0.00 2.29
2065 2350 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
2066 2351 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
2067 2352 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
2068 2353 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
2069 2354 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
2070 2355 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
2071 2356 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2072 2357 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2073 2358 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2074 2359 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2075 2360 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2076 2361 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2077 2362 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2078 2363 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2079 2364 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2080 2365 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2081 2366 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2082 2367 7.221450 CAATATACTCCCTCCGTTCCAAAATA 58.779 38.462 0.00 0.00 0.00 1.40
2083 2368 5.906772 ATATACTCCCTCCGTTCCAAAAT 57.093 39.130 0.00 0.00 0.00 1.82
2084 2369 5.433526 CAATATACTCCCTCCGTTCCAAAA 58.566 41.667 0.00 0.00 0.00 2.44
2085 2370 4.141574 CCAATATACTCCCTCCGTTCCAAA 60.142 45.833 0.00 0.00 0.00 3.28
2086 2371 3.389983 CCAATATACTCCCTCCGTTCCAA 59.610 47.826 0.00 0.00 0.00 3.53
2087 2372 2.969950 CCAATATACTCCCTCCGTTCCA 59.030 50.000 0.00 0.00 0.00 3.53
2088 2373 3.006644 GTCCAATATACTCCCTCCGTTCC 59.993 52.174 0.00 0.00 0.00 3.62
2089 2374 3.006644 GGTCCAATATACTCCCTCCGTTC 59.993 52.174 0.00 0.00 0.00 3.95
2090 2375 2.970640 GGTCCAATATACTCCCTCCGTT 59.029 50.000 0.00 0.00 0.00 4.44
2091 2376 2.090943 TGGTCCAATATACTCCCTCCGT 60.091 50.000 0.00 0.00 0.00 4.69
2092 2377 2.605257 TGGTCCAATATACTCCCTCCG 58.395 52.381 0.00 0.00 0.00 4.63
2093 2378 6.893020 ATATTGGTCCAATATACTCCCTCC 57.107 41.667 28.55 0.00 42.84 4.30
2094 2379 9.892130 CTTAATATTGGTCCAATATACTCCCTC 57.108 37.037 29.43 0.00 43.55 4.30
2095 2380 8.329502 GCTTAATATTGGTCCAATATACTCCCT 58.670 37.037 29.43 18.63 43.55 4.20
2096 2381 8.329502 AGCTTAATATTGGTCCAATATACTCCC 58.670 37.037 29.43 19.03 43.55 4.30
2097 2382 9.740710 AAGCTTAATATTGGTCCAATATACTCC 57.259 33.333 29.43 20.07 43.55 3.85
2176 2461 4.219033 GCACAATACAAAGGTCTGTTTCG 58.781 43.478 0.00 0.00 0.00 3.46
2194 2479 9.941325 ATAACATTCCTCATAAAAATTTGCACA 57.059 25.926 0.00 0.00 0.00 4.57
2224 2509 6.237808 CCTGCGCATCCACAAATTTTAATTAC 60.238 38.462 12.24 0.00 0.00 1.89
2407 2692 7.001099 ACTCGAAAGAACCTTAAAGGATACA 57.999 36.000 0.00 0.00 37.30 2.29
2630 2915 8.052490 GCAAATATACGTTACGGTTTAAGACTC 58.948 37.037 10.20 0.00 0.00 3.36
3028 3315 6.569226 GCAGCCAAGAATGCTACCTATAATTG 60.569 42.308 0.00 0.00 39.38 2.32
3258 3678 5.819825 AAACTTCAGTGAAGGAGTGAAAC 57.180 39.130 31.20 0.00 42.37 2.78
3412 3836 6.089249 ACTACAGCAAAAGAAATTCCTTGG 57.911 37.500 7.31 0.00 0.00 3.61
3427 3851 4.206477 ACATGCATTCAGTACTACAGCA 57.794 40.909 12.04 12.04 34.78 4.41
3518 3942 9.698309 CTTGTGTCAAGTCTCTAAAAGATCTTA 57.302 33.333 8.75 0.00 36.11 2.10
3519 3943 8.207545 ACTTGTGTCAAGTCTCTAAAAGATCTT 58.792 33.333 0.88 0.88 36.11 2.40
3520 3944 7.731054 ACTTGTGTCAAGTCTCTAAAAGATCT 58.269 34.615 9.00 0.00 36.11 2.75
3521 3945 7.954788 ACTTGTGTCAAGTCTCTAAAAGATC 57.045 36.000 9.00 0.00 36.11 2.75
3522 3946 7.954788 GACTTGTGTCAAGTCTCTAAAAGAT 57.045 36.000 25.65 0.00 42.44 2.40
3532 3956 5.519206 ACGTTTTAGAGACTTGTGTCAAGTC 59.481 40.000 25.61 25.61 45.20 3.01
3533 3957 5.416947 ACGTTTTAGAGACTTGTGTCAAGT 58.583 37.500 13.80 13.80 45.20 3.16
3534 3958 5.749109 AGACGTTTTAGAGACTTGTGTCAAG 59.251 40.000 7.78 7.78 45.20 3.02
3535 3959 5.657474 AGACGTTTTAGAGACTTGTGTCAA 58.343 37.500 0.00 0.00 45.20 3.18
3536 3960 5.258456 AGACGTTTTAGAGACTTGTGTCA 57.742 39.130 0.00 0.00 45.20 3.58
3537 3961 7.870588 ATAAGACGTTTTAGAGACTTGTGTC 57.129 36.000 4.75 0.00 43.22 3.67
3538 3962 9.924650 AATATAAGACGTTTTAGAGACTTGTGT 57.075 29.630 4.75 0.00 0.00 3.72
3551 3975 8.943002 CCCTCTGTAAACAAATATAAGACGTTT 58.057 33.333 0.00 0.00 34.40 3.60
3552 3976 8.316214 TCCCTCTGTAAACAAATATAAGACGTT 58.684 33.333 0.00 0.00 0.00 3.99
3553 3977 7.844009 TCCCTCTGTAAACAAATATAAGACGT 58.156 34.615 0.00 0.00 0.00 4.34
3554 3978 7.042658 GCTCCCTCTGTAAACAAATATAAGACG 60.043 40.741 0.00 0.00 0.00 4.18
3555 3979 7.769044 TGCTCCCTCTGTAAACAAATATAAGAC 59.231 37.037 0.00 0.00 0.00 3.01
3556 3980 7.857456 TGCTCCCTCTGTAAACAAATATAAGA 58.143 34.615 0.00 0.00 0.00 2.10
3557 3981 7.770897 ACTGCTCCCTCTGTAAACAAATATAAG 59.229 37.037 0.00 0.00 0.00 1.73
3558 3982 7.630082 ACTGCTCCCTCTGTAAACAAATATAA 58.370 34.615 0.00 0.00 0.00 0.98
3559 3983 7.195374 ACTGCTCCCTCTGTAAACAAATATA 57.805 36.000 0.00 0.00 0.00 0.86
3560 3984 6.067217 ACTGCTCCCTCTGTAAACAAATAT 57.933 37.500 0.00 0.00 0.00 1.28
3561 3985 5.499004 ACTGCTCCCTCTGTAAACAAATA 57.501 39.130 0.00 0.00 0.00 1.40
3562 3986 4.373156 ACTGCTCCCTCTGTAAACAAAT 57.627 40.909 0.00 0.00 0.00 2.32
3563 3987 3.857157 ACTGCTCCCTCTGTAAACAAA 57.143 42.857 0.00 0.00 0.00 2.83
3564 3988 3.135712 TGAACTGCTCCCTCTGTAAACAA 59.864 43.478 0.00 0.00 0.00 2.83
3565 3989 2.703536 TGAACTGCTCCCTCTGTAAACA 59.296 45.455 0.00 0.00 0.00 2.83
3566 3990 3.067833 GTGAACTGCTCCCTCTGTAAAC 58.932 50.000 0.00 0.00 0.00 2.01
3567 3991 2.972713 AGTGAACTGCTCCCTCTGTAAA 59.027 45.455 0.00 0.00 0.00 2.01
3568 3992 2.609747 AGTGAACTGCTCCCTCTGTAA 58.390 47.619 0.00 0.00 0.00 2.41
3569 3993 2.310779 AGTGAACTGCTCCCTCTGTA 57.689 50.000 0.00 0.00 0.00 2.74
3570 3994 1.428869 AAGTGAACTGCTCCCTCTGT 58.571 50.000 0.00 0.00 0.00 3.41
3571 3995 2.557920 AAAGTGAACTGCTCCCTCTG 57.442 50.000 0.00 0.00 0.00 3.35
3572 3996 2.439507 TGAAAAGTGAACTGCTCCCTCT 59.560 45.455 0.00 0.00 0.00 3.69
3573 3997 2.851195 TGAAAAGTGAACTGCTCCCTC 58.149 47.619 0.00 0.00 0.00 4.30
3574 3998 3.297134 TTGAAAAGTGAACTGCTCCCT 57.703 42.857 0.00 0.00 0.00 4.20
3575 3999 4.590850 AATTGAAAAGTGAACTGCTCCC 57.409 40.909 0.00 0.00 0.00 4.30
3576 4000 4.209911 GCAAATTGAAAAGTGAACTGCTCC 59.790 41.667 0.00 0.00 0.00 4.70
3577 4001 4.805192 TGCAAATTGAAAAGTGAACTGCTC 59.195 37.500 0.00 0.00 0.00 4.26
3578 4002 4.757594 TGCAAATTGAAAAGTGAACTGCT 58.242 34.783 0.00 0.00 0.00 4.24
3579 4003 5.006941 ACATGCAAATTGAAAAGTGAACTGC 59.993 36.000 0.00 0.00 0.00 4.40
3580 4004 6.592798 ACATGCAAATTGAAAAGTGAACTG 57.407 33.333 0.00 0.00 0.00 3.16
3880 4304 0.457035 CATCCATCAAGTTTGGGCCG 59.543 55.000 0.00 0.00 34.85 6.13
4259 4692 0.923358 TGTCCCAGAAGTTGGTGGTT 59.077 50.000 1.13 0.00 46.25 3.67
4428 4861 3.379057 TCGACGTGCTGATATTTCCAGTA 59.621 43.478 0.00 0.00 34.29 2.74
4818 5251 0.825840 TGTTTCCAAAAGGGCGAGGG 60.826 55.000 0.00 0.00 36.21 4.30
4828 5261 4.402155 ACTTCTGCAATCAGTGTTTCCAAA 59.598 37.500 0.00 0.00 41.10 3.28
4837 5270 4.139786 ACATCAACACTTCTGCAATCAGT 58.860 39.130 0.00 0.00 41.10 3.41
4838 5271 4.454847 AGACATCAACACTTCTGCAATCAG 59.545 41.667 0.00 0.00 41.67 2.90
5046 5506 2.032071 GCCACCACCTTGCGTAGT 59.968 61.111 0.00 0.00 0.00 2.73
5057 5517 1.078918 CAAGCTCTCGATGCCACCA 60.079 57.895 6.89 0.00 0.00 4.17
5155 5615 1.391157 AAGGCGCAGTCCAGCAAAAA 61.391 50.000 10.83 0.00 34.54 1.94
5245 5707 3.444916 ACCACGATACTTGAATACTGCG 58.555 45.455 0.00 0.00 0.00 5.18
5285 5747 2.110990 CTGACAAACACAACACATGCG 58.889 47.619 0.00 0.00 0.00 4.73
5470 5936 3.555547 GGTTCCAAAACAGTGTTCAATGC 59.444 43.478 9.40 0.00 37.10 3.56
5529 5995 4.398988 TGAATGCCATGACATTAGTGTTCC 59.601 41.667 7.27 0.00 40.31 3.62
5603 6069 5.134202 TGACGCTCATAAACTTCTGAGAA 57.866 39.130 8.56 0.00 41.13 2.87
5648 6114 2.159254 ACAGCACACAAAATCAAGCGTT 60.159 40.909 0.00 0.00 0.00 4.84
5666 6132 3.781079 TGCCAGTTTTCTTTCACACAG 57.219 42.857 0.00 0.00 0.00 3.66
5681 6147 6.018262 CCAAAATATGAATTCAGCATTGCCAG 60.018 38.462 14.54 0.00 0.00 4.85
5684 6150 5.526111 AGCCAAAATATGAATTCAGCATTGC 59.474 36.000 14.54 13.70 0.00 3.56
5686 6152 7.562135 AGAAGCCAAAATATGAATTCAGCATT 58.438 30.769 14.54 12.31 0.00 3.56
5802 6268 8.442660 AGACTTATATTTAGGAATGGAGGGAG 57.557 38.462 0.00 0.00 0.00 4.30
5803 6269 8.814448 AAGACTTATATTTAGGAATGGAGGGA 57.186 34.615 0.00 0.00 0.00 4.20
5805 6271 9.289782 CCAAAGACTTATATTTAGGAATGGAGG 57.710 37.037 0.00 0.00 0.00 4.30
5838 6304 4.219944 GCTTCGTATATGGTCCATAGTGGA 59.780 45.833 16.67 10.21 45.98 4.02
5839 6305 4.021456 TGCTTCGTATATGGTCCATAGTGG 60.021 45.833 16.67 8.25 39.43 4.00
5840 6306 5.134202 TGCTTCGTATATGGTCCATAGTG 57.866 43.478 16.67 9.06 29.42 2.74
5841 6307 5.801531 TTGCTTCGTATATGGTCCATAGT 57.198 39.130 16.67 8.04 29.42 2.12
5842 6308 7.387673 TCATTTTGCTTCGTATATGGTCCATAG 59.612 37.037 16.67 5.34 29.42 2.23
5843 6309 7.220740 TCATTTTGCTTCGTATATGGTCCATA 58.779 34.615 14.08 14.08 0.00 2.74
5844 6310 6.061441 TCATTTTGCTTCGTATATGGTCCAT 58.939 36.000 9.88 9.88 0.00 3.41
5845 6311 5.432645 TCATTTTGCTTCGTATATGGTCCA 58.567 37.500 0.00 0.00 0.00 4.02
5846 6312 5.527582 ACTCATTTTGCTTCGTATATGGTCC 59.472 40.000 0.00 0.00 0.00 4.46
5847 6313 6.604735 ACTCATTTTGCTTCGTATATGGTC 57.395 37.500 0.00 0.00 0.00 4.02
5848 6314 8.500753 TTTACTCATTTTGCTTCGTATATGGT 57.499 30.769 0.00 0.00 0.00 3.55
5849 6315 9.599322 GATTTACTCATTTTGCTTCGTATATGG 57.401 33.333 0.00 0.00 0.00 2.74
5850 6316 9.599322 GGATTTACTCATTTTGCTTCGTATATG 57.401 33.333 0.00 0.00 0.00 1.78
5851 6317 9.337396 TGGATTTACTCATTTTGCTTCGTATAT 57.663 29.630 0.00 0.00 0.00 0.86
5852 6318 8.725405 TGGATTTACTCATTTTGCTTCGTATA 57.275 30.769 0.00 0.00 0.00 1.47
5853 6319 7.624360 TGGATTTACTCATTTTGCTTCGTAT 57.376 32.000 0.00 0.00 0.00 3.06
5854 6320 7.624360 ATGGATTTACTCATTTTGCTTCGTA 57.376 32.000 0.00 0.00 0.00 3.43
5855 6321 5.957842 TGGATTTACTCATTTTGCTTCGT 57.042 34.783 0.00 0.00 0.00 3.85
5856 6322 7.697691 AGTATGGATTTACTCATTTTGCTTCG 58.302 34.615 0.00 0.00 0.00 3.79
5857 6323 8.897752 AGAGTATGGATTTACTCATTTTGCTTC 58.102 33.333 12.65 0.00 46.94 3.86
5858 6324 8.814038 AGAGTATGGATTTACTCATTTTGCTT 57.186 30.769 12.65 0.00 46.94 3.91
5859 6325 9.905713 TTAGAGTATGGATTTACTCATTTTGCT 57.094 29.630 12.65 0.00 46.94 3.91
5865 6331 9.851686 TGCATTTTAGAGTATGGATTTACTCAT 57.148 29.630 12.65 2.98 46.94 2.90
5866 6332 9.851686 ATGCATTTTAGAGTATGGATTTACTCA 57.148 29.630 12.65 0.00 46.94 3.41
5879 6345 8.031864 CGGATGTATCTAGATGCATTTTAGAGT 58.968 37.037 29.66 12.13 42.77 3.24
5880 6346 8.031864 ACGGATGTATCTAGATGCATTTTAGAG 58.968 37.037 29.66 20.36 42.77 2.43
5881 6347 7.896811 ACGGATGTATCTAGATGCATTTTAGA 58.103 34.615 29.66 18.53 42.77 2.10
5882 6348 9.809096 ATACGGATGTATCTAGATGCATTTTAG 57.191 33.333 29.66 22.88 42.77 1.85
5885 6351 9.755804 CATATACGGATGTATCTAGATGCATTT 57.244 33.333 29.66 21.00 42.77 2.32
5886 6352 8.363390 CCATATACGGATGTATCTAGATGCATT 58.637 37.037 29.66 19.73 42.77 3.56
5887 6353 7.725844 TCCATATACGGATGTATCTAGATGCAT 59.274 37.037 29.54 29.54 44.84 3.96
5888 6354 7.013369 GTCCATATACGGATGTATCTAGATGCA 59.987 40.741 23.38 23.38 41.50 3.96
5889 6355 7.229707 AGTCCATATACGGATGTATCTAGATGC 59.770 40.741 15.79 14.54 41.50 3.91
5890 6356 8.684386 AGTCCATATACGGATGTATCTAGATG 57.316 38.462 15.79 0.00 41.50 2.90
5894 6360 9.722184 GCTATAGTCCATATACGGATGTATCTA 57.278 37.037 0.84 0.00 41.50 1.98
5895 6361 8.218488 TGCTATAGTCCATATACGGATGTATCT 58.782 37.037 0.84 0.00 41.50 1.98
5896 6362 8.392372 TGCTATAGTCCATATACGGATGTATC 57.608 38.462 0.84 0.00 41.50 2.24
5897 6363 8.762481 TTGCTATAGTCCATATACGGATGTAT 57.238 34.615 0.84 0.00 43.62 2.29
5898 6364 8.584063 TTTGCTATAGTCCATATACGGATGTA 57.416 34.615 0.84 0.00 37.41 2.29
5899 6365 7.476540 TTTGCTATAGTCCATATACGGATGT 57.523 36.000 0.84 0.00 37.41 3.06
5900 6366 8.948631 ATTTTGCTATAGTCCATATACGGATG 57.051 34.615 0.84 0.00 37.41 3.51
5901 6367 8.982723 AGATTTTGCTATAGTCCATATACGGAT 58.017 33.333 0.84 0.00 37.41 4.18
5902 6368 8.362464 AGATTTTGCTATAGTCCATATACGGA 57.638 34.615 0.84 0.00 0.00 4.69
5903 6369 8.470805 AGAGATTTTGCTATAGTCCATATACGG 58.529 37.037 0.84 0.00 0.00 4.02
5909 6375 9.553064 CTTTGTAGAGATTTTGCTATAGTCCAT 57.447 33.333 0.84 0.00 0.00 3.41
5910 6376 8.758829 TCTTTGTAGAGATTTTGCTATAGTCCA 58.241 33.333 0.84 0.00 0.00 4.02
5911 6377 9.036671 GTCTTTGTAGAGATTTTGCTATAGTCC 57.963 37.037 0.84 0.00 0.00 3.85
5912 6378 9.810545 AGTCTTTGTAGAGATTTTGCTATAGTC 57.189 33.333 0.84 0.00 0.00 2.59
5930 6396 9.379791 CTTCCGTTCCTAAATATAAGTCTTTGT 57.620 33.333 0.00 0.00 0.00 2.83
5931 6397 8.827677 CCTTCCGTTCCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
5932 6398 8.765517 TCCTTCCGTTCCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
5933 6399 8.315220 TCCTTCCGTTCCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
5934 6400 7.564292 ACTCCTTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
5935 6401 7.724287 ACTCCTTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
5936 6402 7.672122 ACTCCTTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
5937 6403 9.075678 TCTACTCCTTCCGTTCCTAAATATAAG 57.924 37.037 0.00 0.00 0.00 1.73
5938 6404 9.597681 ATCTACTCCTTCCGTTCCTAAATATAA 57.402 33.333 0.00 0.00 0.00 0.98
5939 6405 9.021807 CATCTACTCCTTCCGTTCCTAAATATA 57.978 37.037 0.00 0.00 0.00 0.86
5940 6406 7.525692 GCATCTACTCCTTCCGTTCCTAAATAT 60.526 40.741 0.00 0.00 0.00 1.28
5941 6407 6.239232 GCATCTACTCCTTCCGTTCCTAAATA 60.239 42.308 0.00 0.00 0.00 1.40
5942 6408 5.453480 GCATCTACTCCTTCCGTTCCTAAAT 60.453 44.000 0.00 0.00 0.00 1.40
5943 6409 4.142004 GCATCTACTCCTTCCGTTCCTAAA 60.142 45.833 0.00 0.00 0.00 1.85
5944 6410 3.383825 GCATCTACTCCTTCCGTTCCTAA 59.616 47.826 0.00 0.00 0.00 2.69
5945 6411 2.957006 GCATCTACTCCTTCCGTTCCTA 59.043 50.000 0.00 0.00 0.00 2.94
5946 6412 1.757699 GCATCTACTCCTTCCGTTCCT 59.242 52.381 0.00 0.00 0.00 3.36
5947 6413 1.480954 TGCATCTACTCCTTCCGTTCC 59.519 52.381 0.00 0.00 0.00 3.62
5948 6414 2.961526 TGCATCTACTCCTTCCGTTC 57.038 50.000 0.00 0.00 0.00 3.95
5949 6415 3.535561 CAATGCATCTACTCCTTCCGTT 58.464 45.455 0.00 0.00 0.00 4.44
5950 6416 2.743183 GCAATGCATCTACTCCTTCCGT 60.743 50.000 0.00 0.00 0.00 4.69
5951 6417 1.869767 GCAATGCATCTACTCCTTCCG 59.130 52.381 0.00 0.00 0.00 4.30
5952 6418 1.869767 CGCAATGCATCTACTCCTTCC 59.130 52.381 5.91 0.00 0.00 3.46
5953 6419 2.555199 ACGCAATGCATCTACTCCTTC 58.445 47.619 5.91 0.00 0.00 3.46
5954 6420 2.698855 ACGCAATGCATCTACTCCTT 57.301 45.000 5.91 0.00 0.00 3.36
5955 6421 2.695666 ACTACGCAATGCATCTACTCCT 59.304 45.455 5.91 0.00 0.00 3.69
5956 6422 3.099267 ACTACGCAATGCATCTACTCC 57.901 47.619 5.91 0.00 0.00 3.85
5957 6423 3.865745 ACAACTACGCAATGCATCTACTC 59.134 43.478 5.91 0.00 0.00 2.59
5958 6424 3.861840 ACAACTACGCAATGCATCTACT 58.138 40.909 5.91 0.00 0.00 2.57
5959 6425 3.301835 CGACAACTACGCAATGCATCTAC 60.302 47.826 5.91 0.00 0.00 2.59
5960 6426 2.857748 CGACAACTACGCAATGCATCTA 59.142 45.455 5.91 0.00 0.00 1.98
5961 6427 1.660607 CGACAACTACGCAATGCATCT 59.339 47.619 5.91 0.00 0.00 2.90
5962 6428 1.393539 ACGACAACTACGCAATGCATC 59.606 47.619 5.91 0.00 0.00 3.91
5963 6429 1.128507 CACGACAACTACGCAATGCAT 59.871 47.619 5.91 0.00 0.00 3.96
5964 6430 0.510790 CACGACAACTACGCAATGCA 59.489 50.000 5.91 0.00 0.00 3.96
5965 6431 0.179225 CCACGACAACTACGCAATGC 60.179 55.000 0.00 0.00 0.00 3.56
5966 6432 1.424403 TCCACGACAACTACGCAATG 58.576 50.000 0.00 0.00 0.00 2.82
5967 6433 2.157834 TTCCACGACAACTACGCAAT 57.842 45.000 0.00 0.00 0.00 3.56
5968 6434 1.937278 TTTCCACGACAACTACGCAA 58.063 45.000 0.00 0.00 0.00 4.85
5969 6435 2.157834 ATTTCCACGACAACTACGCA 57.842 45.000 0.00 0.00 0.00 5.24
5970 6436 4.386652 TCTTTATTTCCACGACAACTACGC 59.613 41.667 0.00 0.00 0.00 4.42
5971 6437 6.456447 TTCTTTATTTCCACGACAACTACG 57.544 37.500 0.00 0.00 0.00 3.51
5972 6438 8.553696 TCTTTTCTTTATTTCCACGACAACTAC 58.446 33.333 0.00 0.00 0.00 2.73
5973 6439 8.665643 TCTTTTCTTTATTTCCACGACAACTA 57.334 30.769 0.00 0.00 0.00 2.24
5974 6440 7.562454 TCTTTTCTTTATTTCCACGACAACT 57.438 32.000 0.00 0.00 0.00 3.16
5977 6443 9.458374 GATTTTCTTTTCTTTATTTCCACGACA 57.542 29.630 0.00 0.00 0.00 4.35
5980 6446 9.463443 ACAGATTTTCTTTTCTTTATTTCCACG 57.537 29.630 0.00 0.00 0.00 4.94
5997 6463 7.259290 TGAGTGTTTAACCTCACAGATTTTC 57.741 36.000 10.64 0.00 37.07 2.29
6003 6469 6.618287 TCATTTGAGTGTTTAACCTCACAG 57.382 37.500 13.17 8.30 37.07 3.66
6032 6498 8.635765 TCTTGCTACCTGTAATTTCAAAGAAT 57.364 30.769 0.00 0.00 0.00 2.40
6034 6500 7.174946 CCTTCTTGCTACCTGTAATTTCAAAGA 59.825 37.037 0.00 0.00 0.00 2.52
6051 6517 3.192844 TCGTACGATCTTTCCTTCTTGCT 59.807 43.478 15.28 0.00 0.00 3.91
6068 6535 5.353938 TGGTTTGTAGGATTGCTATCGTAC 58.646 41.667 24.64 24.64 45.65 3.67
6070 6537 4.161565 TCTGGTTTGTAGGATTGCTATCGT 59.838 41.667 8.35 8.35 33.68 3.73
6071 6538 4.693283 TCTGGTTTGTAGGATTGCTATCG 58.307 43.478 2.01 0.00 0.00 2.92
6073 6540 5.191722 TCCTTCTGGTTTGTAGGATTGCTAT 59.808 40.000 0.00 0.00 32.00 2.97
6083 6550 8.871629 TTGCTAATATTTCCTTCTGGTTTGTA 57.128 30.769 0.00 0.00 34.23 2.41
6084 6551 7.669722 TCTTGCTAATATTTCCTTCTGGTTTGT 59.330 33.333 0.00 0.00 34.23 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.