Multiple sequence alignment - TraesCS2D01G435000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G435000 chr2D 100.000 3212 0 0 1 3212 545936689 545939900 0.000000e+00 5895
1 TraesCS2D01G435000 chr2A 87.332 2305 116 60 718 2905 686998768 687001013 0.000000e+00 2477
2 TraesCS2D01G435000 chr2A 82.707 399 48 12 80 462 420109665 420110058 5.130000e-88 335
3 TraesCS2D01G435000 chr2A 97.030 101 3 0 3112 3212 687001530 687001630 1.530000e-38 171
4 TraesCS2D01G435000 chr2A 95.062 81 4 0 1 81 686998357 686998437 9.350000e-26 128
5 TraesCS2D01G435000 chr2B 86.811 925 67 20 1611 2516 652616168 652617056 0.000000e+00 981
6 TraesCS2D01G435000 chr2B 87.533 762 45 25 887 1616 652614733 652615476 0.000000e+00 835
7 TraesCS2D01G435000 chr2B 84.906 318 29 14 462 770 652612763 652613070 1.450000e-78 303
8 TraesCS2D01G435000 chr2B 94.792 96 5 0 3117 3212 652617618 652617713 2.000000e-32 150
9 TraesCS2D01G435000 chr2B 94.737 95 5 0 762 856 652613186 652613280 7.180000e-32 148
10 TraesCS2D01G435000 chr7D 92.950 383 27 0 80 462 110526130 110526512 2.800000e-155 558
11 TraesCS2D01G435000 chr7D 92.529 348 23 3 111 457 138300345 138300690 2.230000e-136 496
12 TraesCS2D01G435000 chr1D 89.691 388 34 3 80 464 20997672 20997288 1.040000e-134 490
13 TraesCS2D01G435000 chr4B 88.325 394 41 5 78 469 90164844 90165234 4.850000e-128 468
14 TraesCS2D01G435000 chr5B 88.601 386 40 4 78 461 250597518 250597901 1.750000e-127 466
15 TraesCS2D01G435000 chr1A 94.526 274 14 1 193 466 21543821 21544093 3.830000e-114 422
16 TraesCS2D01G435000 chr1A 85.861 389 52 3 75 461 444121557 444121170 8.290000e-111 411
17 TraesCS2D01G435000 chr7B 81.907 409 54 11 78 471 628591069 628590666 8.590000e-86 327
18 TraesCS2D01G435000 chr6D 80.676 414 61 12 80 478 325712409 325712818 1.450000e-78 303
19 TraesCS2D01G435000 chr7A 90.164 122 9 3 273 392 211737661 211737781 4.290000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G435000 chr2D 545936689 545939900 3211 False 5895.000000 5895 100.000000 1 3212 1 chr2D.!!$F1 3211
1 TraesCS2D01G435000 chr2A 686998357 687001630 3273 False 925.333333 2477 93.141333 1 3212 3 chr2A.!!$F2 3211
2 TraesCS2D01G435000 chr2B 652612763 652617713 4950 False 483.400000 981 89.755800 462 3212 5 chr2B.!!$F1 2750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
423 424 0.035056 ATTTCTGGTGGAGAAGCGGG 60.035 55.0 0.0 0.0 41.86 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2223 4657 0.305922 GCATCTACAGTTCATGCCGC 59.694 55.0 5.43 0.0 37.54 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 1.026718 AGGGAGATTTCTTTGCGCCG 61.027 55.000 4.18 0.00 0.00 6.46
71 72 1.226407 GAGATTTCTTTGCGCCGGC 60.226 57.895 19.07 19.07 40.52 6.13
80 81 4.041617 TGCGCCGGCACATATAAG 57.958 55.556 28.98 8.44 46.21 1.73
81 82 1.596752 TGCGCCGGCACATATAAGG 60.597 57.895 28.98 7.61 46.21 2.69
82 83 2.325082 GCGCCGGCACATATAAGGG 61.325 63.158 28.98 6.77 39.62 3.95
83 84 2.325082 CGCCGGCACATATAAGGGC 61.325 63.158 28.98 0.00 37.21 5.19
85 86 4.771127 CGGCACATATAAGGGCGT 57.229 55.556 0.00 0.00 44.32 5.68
86 87 2.234613 CGGCACATATAAGGGCGTG 58.765 57.895 0.00 0.00 44.32 5.34
87 88 0.531974 CGGCACATATAAGGGCGTGT 60.532 55.000 0.00 0.00 44.32 4.49
88 89 1.675552 GGCACATATAAGGGCGTGTT 58.324 50.000 0.00 0.00 0.00 3.32
89 90 1.602377 GGCACATATAAGGGCGTGTTC 59.398 52.381 0.00 0.00 0.00 3.18
90 91 1.260561 GCACATATAAGGGCGTGTTCG 59.739 52.381 0.00 0.00 40.37 3.95
91 92 1.864711 CACATATAAGGGCGTGTTCGG 59.135 52.381 0.00 0.00 37.56 4.30
92 93 1.758280 ACATATAAGGGCGTGTTCGGA 59.242 47.619 0.00 0.00 37.56 4.55
93 94 2.367567 ACATATAAGGGCGTGTTCGGAT 59.632 45.455 0.00 0.00 37.56 4.18
94 95 2.519377 TATAAGGGCGTGTTCGGATG 57.481 50.000 0.00 0.00 37.56 3.51
95 96 0.814010 ATAAGGGCGTGTTCGGATGC 60.814 55.000 0.00 0.00 37.56 3.91
96 97 1.895020 TAAGGGCGTGTTCGGATGCT 61.895 55.000 0.00 0.00 37.56 3.79
97 98 3.195698 GGGCGTGTTCGGATGCTC 61.196 66.667 0.00 0.00 37.56 4.26
98 99 2.125512 GGCGTGTTCGGATGCTCT 60.126 61.111 0.00 0.00 37.56 4.09
99 100 2.167861 GGCGTGTTCGGATGCTCTC 61.168 63.158 0.00 0.00 37.56 3.20
100 101 2.167861 GCGTGTTCGGATGCTCTCC 61.168 63.158 0.00 0.00 41.07 3.71
107 108 2.733945 GGATGCTCTCCGCTCCTC 59.266 66.667 0.00 0.00 40.11 3.71
108 109 2.130426 GGATGCTCTCCGCTCCTCA 61.130 63.158 0.00 0.00 40.11 3.86
109 110 1.363443 GATGCTCTCCGCTCCTCAG 59.637 63.158 0.00 0.00 40.11 3.35
110 111 2.697992 GATGCTCTCCGCTCCTCAGC 62.698 65.000 0.00 0.00 42.96 4.26
111 112 3.146913 GCTCTCCGCTCCTCAGCT 61.147 66.667 0.00 0.00 44.40 4.24
112 113 3.119193 CTCTCCGCTCCTCAGCTC 58.881 66.667 0.00 0.00 44.40 4.09
113 114 1.453745 CTCTCCGCTCCTCAGCTCT 60.454 63.158 0.00 0.00 44.40 4.09
114 115 1.727511 CTCTCCGCTCCTCAGCTCTG 61.728 65.000 0.00 0.00 44.40 3.35
115 116 3.429080 CTCCGCTCCTCAGCTCTGC 62.429 68.421 0.00 0.00 44.40 4.26
116 117 3.459965 CCGCTCCTCAGCTCTGCT 61.460 66.667 0.00 0.00 44.40 4.24
117 118 2.104729 CGCTCCTCAGCTCTGCTC 59.895 66.667 0.00 0.00 44.40 4.26
118 119 2.500646 GCTCCTCAGCTCTGCTCC 59.499 66.667 0.00 0.00 43.09 4.70
119 120 3.092780 GCTCCTCAGCTCTGCTCCC 62.093 68.421 0.00 0.00 43.09 4.30
120 121 2.757508 TCCTCAGCTCTGCTCCCG 60.758 66.667 0.00 0.00 36.40 5.14
121 122 3.847602 CCTCAGCTCTGCTCCCGG 61.848 72.222 0.00 0.00 36.40 5.73
122 123 2.757508 CTCAGCTCTGCTCCCGGA 60.758 66.667 0.73 0.00 36.40 5.14
123 124 2.757508 TCAGCTCTGCTCCCGGAG 60.758 66.667 10.41 10.41 45.50 4.63
124 125 3.073735 CAGCTCTGCTCCCGGAGT 61.074 66.667 16.09 0.00 44.71 3.85
125 126 2.284258 AGCTCTGCTCCCGGAGTT 60.284 61.111 16.09 0.00 44.71 3.01
126 127 2.125350 GCTCTGCTCCCGGAGTTG 60.125 66.667 16.09 9.04 44.71 3.16
127 128 2.650116 GCTCTGCTCCCGGAGTTGA 61.650 63.158 16.09 12.51 44.71 3.18
128 129 1.965754 GCTCTGCTCCCGGAGTTGAT 61.966 60.000 16.09 0.00 44.71 2.57
129 130 0.179089 CTCTGCTCCCGGAGTTGATG 60.179 60.000 16.09 2.78 39.23 3.07
130 131 1.153289 CTGCTCCCGGAGTTGATGG 60.153 63.158 16.09 0.00 31.39 3.51
131 132 1.612146 TGCTCCCGGAGTTGATGGA 60.612 57.895 16.09 0.00 31.39 3.41
132 133 1.144936 GCTCCCGGAGTTGATGGAG 59.855 63.158 16.09 0.00 45.83 3.86
133 134 1.144936 CTCCCGGAGTTGATGGAGC 59.855 63.158 0.73 0.00 38.12 4.70
134 135 1.612146 TCCCGGAGTTGATGGAGCA 60.612 57.895 0.73 0.00 0.00 4.26
135 136 1.198094 TCCCGGAGTTGATGGAGCAA 61.198 55.000 0.73 0.00 0.00 3.91
136 137 1.026718 CCCGGAGTTGATGGAGCAAC 61.027 60.000 0.73 0.00 46.47 4.17
140 141 2.480555 GTTGATGGAGCAACGCCG 59.519 61.111 0.00 0.00 38.79 6.46
141 142 2.032634 GTTGATGGAGCAACGCCGA 61.033 57.895 0.00 0.00 38.79 5.54
142 143 1.302112 TTGATGGAGCAACGCCGAA 60.302 52.632 0.00 0.00 0.00 4.30
143 144 1.573829 TTGATGGAGCAACGCCGAAC 61.574 55.000 0.00 0.00 0.00 3.95
144 145 2.031919 ATGGAGCAACGCCGAACA 59.968 55.556 0.00 0.00 0.00 3.18
145 146 1.970917 GATGGAGCAACGCCGAACAG 61.971 60.000 0.00 0.00 0.00 3.16
146 147 3.423154 GGAGCAACGCCGAACAGG 61.423 66.667 0.00 0.00 44.97 4.00
147 148 2.665185 GAGCAACGCCGAACAGGT 60.665 61.111 0.00 0.00 43.70 4.00
148 149 1.373748 GAGCAACGCCGAACAGGTA 60.374 57.895 0.00 0.00 43.70 3.08
149 150 0.947180 GAGCAACGCCGAACAGGTAA 60.947 55.000 0.00 0.00 43.70 2.85
150 151 0.533308 AGCAACGCCGAACAGGTAAA 60.533 50.000 0.00 0.00 43.70 2.01
151 152 0.385098 GCAACGCCGAACAGGTAAAC 60.385 55.000 0.00 0.00 43.70 2.01
152 153 1.223187 CAACGCCGAACAGGTAAACT 58.777 50.000 0.00 0.00 43.70 2.66
153 154 1.193874 CAACGCCGAACAGGTAAACTC 59.806 52.381 0.00 0.00 43.70 3.01
154 155 0.320160 ACGCCGAACAGGTAAACTCC 60.320 55.000 0.00 0.00 43.70 3.85
155 156 1.349259 CGCCGAACAGGTAAACTCCG 61.349 60.000 0.00 0.00 43.70 4.63
156 157 0.320160 GCCGAACAGGTAAACTCCGT 60.320 55.000 0.00 0.00 43.70 4.69
157 158 1.425412 CCGAACAGGTAAACTCCGTG 58.575 55.000 0.00 0.00 34.51 4.94
158 159 1.425412 CGAACAGGTAAACTCCGTGG 58.575 55.000 0.00 0.00 0.00 4.94
159 160 1.000060 CGAACAGGTAAACTCCGTGGA 60.000 52.381 0.00 0.00 0.00 4.02
160 161 2.685100 GAACAGGTAAACTCCGTGGAG 58.315 52.381 14.35 14.35 46.91 3.86
172 173 3.132863 CGTGGAGTAGAAAACGGGG 57.867 57.895 0.00 0.00 32.55 5.73
173 174 0.604578 CGTGGAGTAGAAAACGGGGA 59.395 55.000 0.00 0.00 32.55 4.81
174 175 1.403780 CGTGGAGTAGAAAACGGGGAG 60.404 57.143 0.00 0.00 32.55 4.30
175 176 0.611714 TGGAGTAGAAAACGGGGAGC 59.388 55.000 0.00 0.00 0.00 4.70
176 177 0.459759 GGAGTAGAAAACGGGGAGCG 60.460 60.000 0.00 0.00 0.00 5.03
177 178 0.459759 GAGTAGAAAACGGGGAGCGG 60.460 60.000 0.00 0.00 0.00 5.52
178 179 0.901580 AGTAGAAAACGGGGAGCGGA 60.902 55.000 0.00 0.00 0.00 5.54
179 180 0.459759 GTAGAAAACGGGGAGCGGAG 60.460 60.000 0.00 0.00 0.00 4.63
200 201 3.913089 GCTGGTTACAGGTGAAAAATGG 58.087 45.455 0.00 0.00 45.04 3.16
201 202 3.306019 GCTGGTTACAGGTGAAAAATGGG 60.306 47.826 0.00 0.00 45.04 4.00
202 203 3.235200 TGGTTACAGGTGAAAAATGGGG 58.765 45.455 0.00 0.00 0.00 4.96
203 204 3.117093 TGGTTACAGGTGAAAAATGGGGA 60.117 43.478 0.00 0.00 0.00 4.81
204 205 3.509967 GGTTACAGGTGAAAAATGGGGAG 59.490 47.826 0.00 0.00 0.00 4.30
205 206 1.632589 ACAGGTGAAAAATGGGGAGC 58.367 50.000 0.00 0.00 0.00 4.70
206 207 1.147817 ACAGGTGAAAAATGGGGAGCT 59.852 47.619 0.00 0.00 0.00 4.09
207 208 1.547372 CAGGTGAAAAATGGGGAGCTG 59.453 52.381 0.00 0.00 0.00 4.24
208 209 0.247460 GGTGAAAAATGGGGAGCTGC 59.753 55.000 0.00 0.00 0.00 5.25
209 210 1.260544 GTGAAAAATGGGGAGCTGCT 58.739 50.000 0.00 0.00 0.00 4.24
210 211 2.446435 GTGAAAAATGGGGAGCTGCTA 58.554 47.619 0.15 0.00 0.00 3.49
211 212 3.026694 GTGAAAAATGGGGAGCTGCTAT 58.973 45.455 0.15 0.00 0.00 2.97
212 213 3.448660 GTGAAAAATGGGGAGCTGCTATT 59.551 43.478 0.15 3.86 0.00 1.73
213 214 4.081476 GTGAAAAATGGGGAGCTGCTATTT 60.081 41.667 0.15 9.81 0.00 1.40
214 215 4.160252 TGAAAAATGGGGAGCTGCTATTTC 59.840 41.667 16.56 13.93 0.00 2.17
215 216 3.677156 AAATGGGGAGCTGCTATTTCT 57.323 42.857 0.15 0.00 0.00 2.52
216 217 2.653234 ATGGGGAGCTGCTATTTCTG 57.347 50.000 0.15 0.00 0.00 3.02
217 218 1.583556 TGGGGAGCTGCTATTTCTGA 58.416 50.000 0.15 0.00 0.00 3.27
218 219 1.487976 TGGGGAGCTGCTATTTCTGAG 59.512 52.381 0.15 0.00 0.00 3.35
219 220 1.765314 GGGGAGCTGCTATTTCTGAGA 59.235 52.381 0.15 0.00 0.00 3.27
220 221 2.371510 GGGGAGCTGCTATTTCTGAGAT 59.628 50.000 0.15 0.00 0.00 2.75
221 222 3.401182 GGGAGCTGCTATTTCTGAGATG 58.599 50.000 0.15 0.00 0.00 2.90
222 223 3.181456 GGGAGCTGCTATTTCTGAGATGT 60.181 47.826 0.15 0.00 0.00 3.06
223 224 3.808726 GGAGCTGCTATTTCTGAGATGTG 59.191 47.826 0.15 0.00 0.00 3.21
224 225 4.442612 GGAGCTGCTATTTCTGAGATGTGA 60.443 45.833 0.15 0.00 0.00 3.58
225 226 4.695396 AGCTGCTATTTCTGAGATGTGAG 58.305 43.478 0.00 0.00 0.00 3.51
226 227 4.405036 AGCTGCTATTTCTGAGATGTGAGA 59.595 41.667 0.00 0.00 0.00 3.27
227 228 5.070714 AGCTGCTATTTCTGAGATGTGAGAT 59.929 40.000 0.00 0.00 0.00 2.75
228 229 5.406175 GCTGCTATTTCTGAGATGTGAGATC 59.594 44.000 0.00 0.00 0.00 2.75
229 230 5.851720 TGCTATTTCTGAGATGTGAGATCC 58.148 41.667 0.00 0.00 0.00 3.36
230 231 5.601729 TGCTATTTCTGAGATGTGAGATCCT 59.398 40.000 0.00 0.00 0.00 3.24
231 232 6.099413 TGCTATTTCTGAGATGTGAGATCCTT 59.901 38.462 0.00 0.00 0.00 3.36
232 233 7.288621 TGCTATTTCTGAGATGTGAGATCCTTA 59.711 37.037 0.00 0.00 0.00 2.69
233 234 8.147058 GCTATTTCTGAGATGTGAGATCCTTAA 58.853 37.037 0.00 0.00 0.00 1.85
236 237 8.954950 TTTCTGAGATGTGAGATCCTTAAATC 57.045 34.615 0.00 0.00 0.00 2.17
237 238 7.666063 TCTGAGATGTGAGATCCTTAAATCA 57.334 36.000 0.00 0.00 0.00 2.57
238 239 8.082672 TCTGAGATGTGAGATCCTTAAATCAA 57.917 34.615 0.00 0.00 0.00 2.57
239 240 8.202811 TCTGAGATGTGAGATCCTTAAATCAAG 58.797 37.037 0.00 0.00 0.00 3.02
267 268 9.899226 AGTTGATAAGATTTACAAGAAAACTGC 57.101 29.630 0.00 0.00 0.00 4.40
268 269 9.129209 GTTGATAAGATTTACAAGAAAACTGCC 57.871 33.333 0.00 0.00 0.00 4.85
269 270 8.402798 TGATAAGATTTACAAGAAAACTGCCA 57.597 30.769 0.00 0.00 0.00 4.92
270 271 8.296713 TGATAAGATTTACAAGAAAACTGCCAC 58.703 33.333 0.00 0.00 0.00 5.01
271 272 5.453567 AGATTTACAAGAAAACTGCCACC 57.546 39.130 0.00 0.00 0.00 4.61
272 273 3.701532 TTTACAAGAAAACTGCCACCG 57.298 42.857 0.00 0.00 0.00 4.94
273 274 0.948678 TACAAGAAAACTGCCACCGC 59.051 50.000 0.00 0.00 0.00 5.68
274 275 1.007387 CAAGAAAACTGCCACCGCC 60.007 57.895 0.00 0.00 0.00 6.13
275 276 1.454847 AAGAAAACTGCCACCGCCA 60.455 52.632 0.00 0.00 0.00 5.69
276 277 1.040339 AAGAAAACTGCCACCGCCAA 61.040 50.000 0.00 0.00 0.00 4.52
277 278 1.007387 GAAAACTGCCACCGCCAAG 60.007 57.895 0.00 0.00 0.00 3.61
278 279 1.734388 GAAAACTGCCACCGCCAAGT 61.734 55.000 0.00 0.00 0.00 3.16
279 280 2.015227 AAAACTGCCACCGCCAAGTG 62.015 55.000 0.00 0.00 37.51 3.16
280 281 2.902423 AAACTGCCACCGCCAAGTGA 62.902 55.000 0.00 0.00 40.34 3.41
281 282 2.594303 CTGCCACCGCCAAGTGAA 60.594 61.111 0.00 0.00 40.34 3.18
282 283 2.124109 TGCCACCGCCAAGTGAAA 60.124 55.556 0.00 0.00 40.34 2.69
283 284 1.733402 CTGCCACCGCCAAGTGAAAA 61.733 55.000 0.00 0.00 40.34 2.29
284 285 1.299850 GCCACCGCCAAGTGAAAAC 60.300 57.895 0.00 0.00 40.34 2.43
285 286 1.008995 CCACCGCCAAGTGAAAACG 60.009 57.895 0.00 0.00 40.34 3.60
287 288 3.427670 CCGCCAAGTGAAAACGGT 58.572 55.556 0.00 0.00 39.05 4.83
288 289 1.731093 CCGCCAAGTGAAAACGGTT 59.269 52.632 0.00 0.00 39.05 4.44
289 290 0.317519 CCGCCAAGTGAAAACGGTTC 60.318 55.000 0.00 0.00 39.05 3.62
290 291 0.656205 CGCCAAGTGAAAACGGTTCG 60.656 55.000 0.00 0.00 0.00 3.95
291 292 0.933047 GCCAAGTGAAAACGGTTCGC 60.933 55.000 6.56 6.56 0.00 4.70
292 293 0.656205 CCAAGTGAAAACGGTTCGCG 60.656 55.000 0.00 0.00 34.38 5.87
293 294 1.010462 AAGTGAAAACGGTTCGCGC 60.010 52.632 0.00 0.00 34.38 6.86
294 295 2.689575 AAGTGAAAACGGTTCGCGCG 62.690 55.000 26.76 26.76 34.38 6.86
295 296 4.653252 TGAAAACGGTTCGCGCGC 62.653 61.111 27.95 23.91 0.00 6.86
311 312 4.681978 GCCCACGTCCAACTCGCT 62.682 66.667 0.00 0.00 0.00 4.93
312 313 2.432628 CCCACGTCCAACTCGCTC 60.433 66.667 0.00 0.00 0.00 5.03
313 314 2.805353 CCACGTCCAACTCGCTCG 60.805 66.667 0.00 0.00 0.00 5.03
314 315 2.050351 CACGTCCAACTCGCTCGT 60.050 61.111 0.00 0.00 35.12 4.18
315 316 1.660575 CACGTCCAACTCGCTCGTT 60.661 57.895 0.00 0.00 32.47 3.85
316 317 1.371389 ACGTCCAACTCGCTCGTTC 60.371 57.895 0.00 0.00 0.00 3.95
317 318 2.087009 CGTCCAACTCGCTCGTTCC 61.087 63.158 0.00 0.00 0.00 3.62
318 319 1.289380 GTCCAACTCGCTCGTTCCT 59.711 57.895 0.00 0.00 0.00 3.36
319 320 1.009389 GTCCAACTCGCTCGTTCCTG 61.009 60.000 0.00 0.00 0.00 3.86
320 321 1.006102 CCAACTCGCTCGTTCCTGT 60.006 57.895 0.00 0.00 0.00 4.00
321 322 0.600255 CCAACTCGCTCGTTCCTGTT 60.600 55.000 0.00 0.00 0.00 3.16
322 323 1.217882 CAACTCGCTCGTTCCTGTTT 58.782 50.000 0.00 0.00 0.00 2.83
323 324 1.192534 CAACTCGCTCGTTCCTGTTTC 59.807 52.381 0.00 0.00 0.00 2.78
324 325 0.319641 ACTCGCTCGTTCCTGTTTCC 60.320 55.000 0.00 0.00 0.00 3.13
325 326 0.319555 CTCGCTCGTTCCTGTTTCCA 60.320 55.000 0.00 0.00 0.00 3.53
326 327 0.599204 TCGCTCGTTCCTGTTTCCAC 60.599 55.000 0.00 0.00 0.00 4.02
327 328 1.860078 GCTCGTTCCTGTTTCCACG 59.140 57.895 0.00 0.00 0.00 4.94
328 329 1.860078 CTCGTTCCTGTTTCCACGC 59.140 57.895 0.00 0.00 32.59 5.34
329 330 1.566018 CTCGTTCCTGTTTCCACGCC 61.566 60.000 0.00 0.00 32.59 5.68
330 331 2.613506 CGTTCCTGTTTCCACGCCC 61.614 63.158 0.00 0.00 0.00 6.13
331 332 1.527380 GTTCCTGTTTCCACGCCCA 60.527 57.895 0.00 0.00 0.00 5.36
332 333 1.228124 TTCCTGTTTCCACGCCCAG 60.228 57.895 0.00 0.00 0.00 4.45
333 334 3.365265 CCTGTTTCCACGCCCAGC 61.365 66.667 0.00 0.00 0.00 4.85
334 335 2.281761 CTGTTTCCACGCCCAGCT 60.282 61.111 0.00 0.00 0.00 4.24
335 336 2.281484 TGTTTCCACGCCCAGCTC 60.281 61.111 0.00 0.00 0.00 4.09
336 337 3.056328 GTTTCCACGCCCAGCTCC 61.056 66.667 0.00 0.00 0.00 4.70
337 338 3.565214 TTTCCACGCCCAGCTCCA 61.565 61.111 0.00 0.00 0.00 3.86
338 339 3.842925 TTTCCACGCCCAGCTCCAC 62.843 63.158 0.00 0.00 0.00 4.02
345 346 2.499205 CCCAGCTCCACGCGAATA 59.501 61.111 15.93 0.00 45.59 1.75
346 347 1.592669 CCCAGCTCCACGCGAATAG 60.593 63.158 15.93 7.60 45.59 1.73
347 348 1.592669 CCAGCTCCACGCGAATAGG 60.593 63.158 15.93 9.35 45.59 2.57
348 349 1.592669 CAGCTCCACGCGAATAGGG 60.593 63.158 15.93 6.13 45.59 3.53
349 350 1.756950 AGCTCCACGCGAATAGGGA 60.757 57.895 15.93 10.45 45.59 4.20
351 352 1.300233 CTCCACGCGAATAGGGAGC 60.300 63.158 15.93 0.00 40.37 4.70
352 353 2.016393 CTCCACGCGAATAGGGAGCA 62.016 60.000 15.93 0.00 40.37 4.26
353 354 1.592669 CCACGCGAATAGGGAGCAG 60.593 63.158 15.93 0.00 36.53 4.24
354 355 1.437573 CACGCGAATAGGGAGCAGA 59.562 57.895 15.93 0.00 36.53 4.26
355 356 0.596083 CACGCGAATAGGGAGCAGAG 60.596 60.000 15.93 0.00 36.53 3.35
356 357 1.663074 CGCGAATAGGGAGCAGAGC 60.663 63.158 0.00 0.00 34.27 4.09
357 358 1.745264 GCGAATAGGGAGCAGAGCT 59.255 57.895 0.00 0.00 43.88 4.09
358 359 0.599728 GCGAATAGGGAGCAGAGCTG 60.600 60.000 0.00 0.00 39.88 4.24
368 369 3.123620 CAGAGCTGCCTGCCGAAC 61.124 66.667 0.00 0.00 44.23 3.95
369 370 3.630013 AGAGCTGCCTGCCGAACA 61.630 61.111 0.00 0.00 44.23 3.18
370 371 2.437359 GAGCTGCCTGCCGAACAT 60.437 61.111 0.00 0.00 44.23 2.71
371 372 2.437359 AGCTGCCTGCCGAACATC 60.437 61.111 0.00 0.00 44.23 3.06
372 373 2.437359 GCTGCCTGCCGAACATCT 60.437 61.111 0.00 0.00 35.15 2.90
373 374 2.467826 GCTGCCTGCCGAACATCTC 61.468 63.158 0.00 0.00 35.15 2.75
375 376 2.125512 GCCTGCCGAACATCTCGT 60.126 61.111 0.00 0.00 46.65 4.18
376 377 1.141019 GCCTGCCGAACATCTCGTA 59.859 57.895 0.00 0.00 46.65 3.43
377 378 1.146358 GCCTGCCGAACATCTCGTAC 61.146 60.000 0.00 0.00 46.65 3.67
378 379 0.456221 CCTGCCGAACATCTCGTACT 59.544 55.000 0.00 0.00 46.65 2.73
379 380 1.674441 CCTGCCGAACATCTCGTACTA 59.326 52.381 0.00 0.00 46.65 1.82
380 381 2.287069 CCTGCCGAACATCTCGTACTAG 60.287 54.545 0.00 0.00 46.65 2.57
381 382 1.065102 TGCCGAACATCTCGTACTAGC 59.935 52.381 0.00 0.00 46.65 3.42
382 383 1.920705 GCCGAACATCTCGTACTAGCG 60.921 57.143 0.00 0.00 46.65 4.26
383 384 1.386961 CGAACATCTCGTACTAGCGC 58.613 55.000 0.00 0.00 42.89 5.92
384 385 1.003759 CGAACATCTCGTACTAGCGCT 60.004 52.381 17.26 17.26 42.89 5.92
385 386 2.220363 CGAACATCTCGTACTAGCGCTA 59.780 50.000 17.75 17.75 42.89 4.26
386 387 3.120615 CGAACATCTCGTACTAGCGCTAT 60.121 47.826 19.19 10.79 42.89 2.97
387 388 4.610905 CGAACATCTCGTACTAGCGCTATT 60.611 45.833 19.19 15.42 42.89 1.73
388 389 4.832590 ACATCTCGTACTAGCGCTATTT 57.167 40.909 19.19 10.70 0.00 1.40
389 390 5.184340 ACATCTCGTACTAGCGCTATTTT 57.816 39.130 19.19 8.05 0.00 1.82
390 391 5.213675 ACATCTCGTACTAGCGCTATTTTC 58.786 41.667 19.19 8.36 0.00 2.29
391 392 5.008811 ACATCTCGTACTAGCGCTATTTTCT 59.991 40.000 19.19 0.98 0.00 2.52
392 393 6.204301 ACATCTCGTACTAGCGCTATTTTCTA 59.796 38.462 19.19 1.78 0.00 2.10
393 394 5.983475 TCTCGTACTAGCGCTATTTTCTAC 58.017 41.667 19.19 6.47 0.00 2.59
394 395 5.525012 TCTCGTACTAGCGCTATTTTCTACA 59.475 40.000 19.19 0.00 0.00 2.74
395 396 6.037500 TCTCGTACTAGCGCTATTTTCTACAA 59.962 38.462 19.19 0.00 0.00 2.41
396 397 6.197276 TCGTACTAGCGCTATTTTCTACAAG 58.803 40.000 19.19 6.26 0.00 3.16
397 398 5.398711 CGTACTAGCGCTATTTTCTACAAGG 59.601 44.000 19.19 3.92 0.00 3.61
398 399 5.593679 ACTAGCGCTATTTTCTACAAGGA 57.406 39.130 19.19 0.00 0.00 3.36
399 400 5.593010 ACTAGCGCTATTTTCTACAAGGAG 58.407 41.667 19.19 4.98 0.00 3.69
400 401 4.473477 AGCGCTATTTTCTACAAGGAGT 57.527 40.909 8.99 0.00 0.00 3.85
401 402 4.184629 AGCGCTATTTTCTACAAGGAGTG 58.815 43.478 8.99 0.00 0.00 3.51
402 403 3.309954 GCGCTATTTTCTACAAGGAGTGG 59.690 47.826 0.00 0.00 0.00 4.00
403 404 3.309954 CGCTATTTTCTACAAGGAGTGGC 59.690 47.826 0.00 0.00 0.00 5.01
404 405 4.261801 GCTATTTTCTACAAGGAGTGGCA 58.738 43.478 0.00 0.00 0.00 4.92
405 406 4.884164 GCTATTTTCTACAAGGAGTGGCAT 59.116 41.667 0.00 0.00 0.00 4.40
406 407 5.358160 GCTATTTTCTACAAGGAGTGGCATT 59.642 40.000 0.00 0.00 0.00 3.56
407 408 6.127619 GCTATTTTCTACAAGGAGTGGCATTT 60.128 38.462 0.00 0.00 0.00 2.32
408 409 5.705609 TTTTCTACAAGGAGTGGCATTTC 57.294 39.130 0.00 0.00 0.00 2.17
409 410 4.640771 TTCTACAAGGAGTGGCATTTCT 57.359 40.909 0.00 0.00 0.00 2.52
410 411 3.942829 TCTACAAGGAGTGGCATTTCTG 58.057 45.455 0.00 0.00 0.00 3.02
411 412 1.915141 ACAAGGAGTGGCATTTCTGG 58.085 50.000 0.00 0.00 0.00 3.86
412 413 1.145738 ACAAGGAGTGGCATTTCTGGT 59.854 47.619 0.00 0.00 0.00 4.00
413 414 1.542915 CAAGGAGTGGCATTTCTGGTG 59.457 52.381 0.00 0.00 0.00 4.17
414 415 0.038744 AGGAGTGGCATTTCTGGTGG 59.961 55.000 0.00 0.00 0.00 4.61
415 416 0.038166 GGAGTGGCATTTCTGGTGGA 59.962 55.000 0.00 0.00 0.00 4.02
416 417 1.457346 GAGTGGCATTTCTGGTGGAG 58.543 55.000 0.00 0.00 0.00 3.86
417 418 1.003580 GAGTGGCATTTCTGGTGGAGA 59.996 52.381 0.00 0.00 0.00 3.71
418 419 1.425066 AGTGGCATTTCTGGTGGAGAA 59.575 47.619 0.00 0.00 39.05 2.87
419 420 1.815003 GTGGCATTTCTGGTGGAGAAG 59.185 52.381 0.00 0.00 41.86 2.85
420 421 0.813821 GGCATTTCTGGTGGAGAAGC 59.186 55.000 0.00 0.00 41.86 3.86
421 422 0.449388 GCATTTCTGGTGGAGAAGCG 59.551 55.000 0.00 0.00 41.86 4.68
422 423 1.089920 CATTTCTGGTGGAGAAGCGG 58.910 55.000 0.00 0.00 41.86 5.52
423 424 0.035056 ATTTCTGGTGGAGAAGCGGG 60.035 55.000 0.00 0.00 41.86 6.13
424 425 1.125093 TTTCTGGTGGAGAAGCGGGA 61.125 55.000 0.00 0.00 41.86 5.14
425 426 1.544825 TTCTGGTGGAGAAGCGGGAG 61.545 60.000 0.00 0.00 35.64 4.30
426 427 2.203788 TGGTGGAGAAGCGGGAGT 60.204 61.111 0.00 0.00 0.00 3.85
427 428 1.831652 CTGGTGGAGAAGCGGGAGTT 61.832 60.000 0.00 0.00 0.00 3.01
428 429 1.376037 GGTGGAGAAGCGGGAGTTG 60.376 63.158 0.00 0.00 0.00 3.16
429 430 1.671742 GTGGAGAAGCGGGAGTTGA 59.328 57.895 0.00 0.00 0.00 3.18
430 431 0.390472 GTGGAGAAGCGGGAGTTGAG 60.390 60.000 0.00 0.00 0.00 3.02
431 432 1.219393 GGAGAAGCGGGAGTTGAGG 59.781 63.158 0.00 0.00 0.00 3.86
432 433 1.258445 GGAGAAGCGGGAGTTGAGGA 61.258 60.000 0.00 0.00 0.00 3.71
433 434 0.827368 GAGAAGCGGGAGTTGAGGAT 59.173 55.000 0.00 0.00 0.00 3.24
434 435 1.208293 GAGAAGCGGGAGTTGAGGATT 59.792 52.381 0.00 0.00 0.00 3.01
435 436 1.208293 AGAAGCGGGAGTTGAGGATTC 59.792 52.381 0.00 0.00 0.00 2.52
436 437 0.108138 AAGCGGGAGTTGAGGATTCG 60.108 55.000 0.00 0.00 0.00 3.34
437 438 1.521681 GCGGGAGTTGAGGATTCGG 60.522 63.158 0.00 0.00 0.00 4.30
438 439 1.956629 GCGGGAGTTGAGGATTCGGA 61.957 60.000 0.00 0.00 0.00 4.55
439 440 0.103208 CGGGAGTTGAGGATTCGGAG 59.897 60.000 0.00 0.00 0.00 4.63
440 441 0.466124 GGGAGTTGAGGATTCGGAGG 59.534 60.000 0.00 0.00 0.00 4.30
441 442 1.486211 GGAGTTGAGGATTCGGAGGA 58.514 55.000 0.00 0.00 0.00 3.71
442 443 1.410882 GGAGTTGAGGATTCGGAGGAG 59.589 57.143 0.00 0.00 0.00 3.69
443 444 0.827368 AGTTGAGGATTCGGAGGAGC 59.173 55.000 0.00 0.00 0.00 4.70
444 445 0.827368 GTTGAGGATTCGGAGGAGCT 59.173 55.000 0.00 0.00 0.00 4.09
445 446 0.826715 TTGAGGATTCGGAGGAGCTG 59.173 55.000 0.00 0.00 0.00 4.24
446 447 1.045350 TGAGGATTCGGAGGAGCTGG 61.045 60.000 0.00 0.00 0.00 4.85
447 448 0.757188 GAGGATTCGGAGGAGCTGGA 60.757 60.000 0.00 0.00 0.00 3.86
448 449 0.758685 AGGATTCGGAGGAGCTGGAG 60.759 60.000 0.00 0.00 0.00 3.86
449 450 1.068921 GATTCGGAGGAGCTGGAGC 59.931 63.158 0.00 0.00 42.49 4.70
450 451 1.680522 GATTCGGAGGAGCTGGAGCA 61.681 60.000 0.00 0.00 45.16 4.26
451 452 1.053264 ATTCGGAGGAGCTGGAGCAT 61.053 55.000 0.00 0.00 45.16 3.79
452 453 1.680522 TTCGGAGGAGCTGGAGCATC 61.681 60.000 0.00 0.00 45.16 3.91
453 454 2.132996 CGGAGGAGCTGGAGCATCT 61.133 63.158 0.00 0.00 45.16 2.90
454 455 1.747774 GGAGGAGCTGGAGCATCTC 59.252 63.158 0.00 6.99 45.16 2.75
463 464 2.755929 GGAGCATCTCCGAACACAC 58.244 57.895 0.00 0.00 41.08 3.82
464 465 0.037326 GGAGCATCTCCGAACACACA 60.037 55.000 0.00 0.00 41.08 3.72
465 466 1.071605 GAGCATCTCCGAACACACAC 58.928 55.000 0.00 0.00 0.00 3.82
466 467 0.681733 AGCATCTCCGAACACACACT 59.318 50.000 0.00 0.00 0.00 3.55
467 468 1.893137 AGCATCTCCGAACACACACTA 59.107 47.619 0.00 0.00 0.00 2.74
490 492 8.730680 ACTAAAGTGTCATCCATTTATGTTCAC 58.269 33.333 0.00 0.00 35.37 3.18
510 512 8.729756 TGTTCACAATTCAAAATATGAGTCGAT 58.270 29.630 0.00 0.00 39.77 3.59
511 513 9.003112 GTTCACAATTCAAAATATGAGTCGATG 57.997 33.333 0.00 0.00 39.77 3.84
516 518 9.726232 CAATTCAAAATATGAGTCGATGAATGT 57.274 29.630 6.01 0.00 39.77 2.71
527 533 8.996024 TGAGTCGATGAATGTCAAAATAAGTA 57.004 30.769 0.00 0.00 0.00 2.24
530 536 9.088512 AGTCGATGAATGTCAAAATAAGTAGTC 57.911 33.333 0.00 0.00 0.00 2.59
542 548 9.174166 TCAAAATAAGTAGTCCAAGAATAAGGC 57.826 33.333 0.00 0.00 0.00 4.35
550 556 7.934120 AGTAGTCCAAGAATAAGGCATTGATAC 59.066 37.037 0.00 0.00 0.00 2.24
565 572 7.071196 AGGCATTGATACAAAGTAGGTATCTCA 59.929 37.037 12.23 2.27 44.67 3.27
602 614 9.945904 AAAAACTTTCTTTTTGTGGGTAATACA 57.054 25.926 0.00 0.00 31.17 2.29
603 615 9.594478 AAAACTTTCTTTTTGTGGGTAATACAG 57.406 29.630 0.00 0.00 0.00 2.74
607 620 9.810545 CTTTCTTTTTGTGGGTAATACAGAAAA 57.189 29.630 0.00 0.00 38.70 2.29
615 628 7.484975 TGTGGGTAATACAGAAAAACAACAAG 58.515 34.615 0.00 0.00 0.00 3.16
638 651 5.775701 AGAGTGATGAGCTAACCGGTATTAT 59.224 40.000 8.00 0.00 0.00 1.28
735 853 5.355910 TGCACATAATACTCAGTCGTCTACA 59.644 40.000 0.00 0.00 0.00 2.74
736 854 5.910166 GCACATAATACTCAGTCGTCTACAG 59.090 44.000 0.00 0.00 0.00 2.74
740 858 5.715429 AATACTCAGTCGTCTACAGTACG 57.285 43.478 3.75 0.00 41.64 3.67
774 892 9.687210 AATTAAAACTGAAAGAACGGGAAATAC 57.313 29.630 0.00 0.00 37.43 1.89
776 894 5.684550 AACTGAAAGAACGGGAAATACAC 57.315 39.130 0.00 0.00 37.43 2.90
856 1098 5.104318 GGAAAAGGTGTGAGGGAGATCTATT 60.104 44.000 0.00 0.00 0.00 1.73
858 1100 4.271807 AGGTGTGAGGGAGATCTATTGA 57.728 45.455 0.00 0.00 0.00 2.57
860 1102 3.706594 GGTGTGAGGGAGATCTATTGACA 59.293 47.826 0.00 0.00 0.00 3.58
861 1103 4.202202 GGTGTGAGGGAGATCTATTGACAG 60.202 50.000 0.00 0.00 0.00 3.51
862 1104 4.646945 GTGTGAGGGAGATCTATTGACAGA 59.353 45.833 0.00 0.00 0.00 3.41
863 1105 5.127845 GTGTGAGGGAGATCTATTGACAGAA 59.872 44.000 0.00 0.00 0.00 3.02
864 1106 5.721480 TGTGAGGGAGATCTATTGACAGAAA 59.279 40.000 0.00 0.00 0.00 2.52
865 1107 6.127225 TGTGAGGGAGATCTATTGACAGAAAG 60.127 42.308 0.00 0.00 0.00 2.62
866 1108 5.163364 TGAGGGAGATCTATTGACAGAAAGC 60.163 44.000 0.00 0.00 0.00 3.51
867 1109 4.054671 GGGAGATCTATTGACAGAAAGCG 58.945 47.826 0.00 0.00 0.00 4.68
868 1110 3.492756 GGAGATCTATTGACAGAAAGCGC 59.507 47.826 0.00 0.00 0.00 5.92
869 1111 3.462021 AGATCTATTGACAGAAAGCGCC 58.538 45.455 2.29 0.00 0.00 6.53
870 1112 2.024176 TCTATTGACAGAAAGCGCCC 57.976 50.000 2.29 0.00 0.00 6.13
871 1113 1.277842 TCTATTGACAGAAAGCGCCCA 59.722 47.619 2.29 0.00 0.00 5.36
872 1114 1.398390 CTATTGACAGAAAGCGCCCAC 59.602 52.381 2.29 0.00 0.00 4.61
873 1115 1.577328 ATTGACAGAAAGCGCCCACG 61.577 55.000 2.29 0.00 44.07 4.94
874 1116 2.357034 GACAGAAAGCGCCCACGA 60.357 61.111 2.29 0.00 43.93 4.35
875 1117 2.357517 ACAGAAAGCGCCCACGAG 60.358 61.111 2.29 0.00 43.93 4.18
895 1137 5.067413 ACGAGACGAGATTAGATTAGCCAAA 59.933 40.000 0.00 0.00 0.00 3.28
896 1138 5.977725 CGAGACGAGATTAGATTAGCCAAAA 59.022 40.000 0.00 0.00 0.00 2.44
950 2639 6.723977 ACCTGAGATACTTCTGTTCTCTTCTT 59.276 38.462 0.00 0.00 37.40 2.52
956 2645 2.723530 TCTGTTCTCTTCTTCCCCCT 57.276 50.000 0.00 0.00 0.00 4.79
967 2666 3.516949 TTCCCCCTTTTCCACCCGC 62.517 63.158 0.00 0.00 0.00 6.13
1090 2789 3.680920 ATCCGTCCGCCCCTCTTCT 62.681 63.158 0.00 0.00 0.00 2.85
1280 2979 1.899534 GTACAACAGCCGGCCCAAA 60.900 57.895 26.15 0.37 0.00 3.28
1281 2980 1.075836 TACAACAGCCGGCCCAAAT 59.924 52.632 26.15 9.29 0.00 2.32
1282 2981 0.328592 TACAACAGCCGGCCCAAATA 59.671 50.000 26.15 8.13 0.00 1.40
1283 2982 0.324275 ACAACAGCCGGCCCAAATAT 60.324 50.000 26.15 0.00 0.00 1.28
1320 3028 5.518847 CGTCTATTTGTTCCTGCGATTCTTA 59.481 40.000 0.00 0.00 0.00 2.10
1382 3102 3.563808 GTGACATCAACAAGTACTTGCCA 59.436 43.478 30.97 17.52 44.03 4.92
1478 3198 8.536175 TCCCCTTATCCAATTTTTGTGATTTAC 58.464 33.333 0.00 0.00 0.00 2.01
1479 3199 8.539544 CCCCTTATCCAATTTTTGTGATTTACT 58.460 33.333 0.00 0.00 0.00 2.24
1480 3200 9.586435 CCCTTATCCAATTTTTGTGATTTACTC 57.414 33.333 0.00 0.00 0.00 2.59
1481 3201 9.586435 CCTTATCCAATTTTTGTGATTTACTCC 57.414 33.333 0.00 0.00 0.00 3.85
1482 3202 9.289303 CTTATCCAATTTTTGTGATTTACTCCG 57.711 33.333 0.00 0.00 0.00 4.63
1529 3249 4.973168 TCTTCACCTGTGCATTCTACTTT 58.027 39.130 0.00 0.00 0.00 2.66
1530 3250 5.376625 TCTTCACCTGTGCATTCTACTTTT 58.623 37.500 0.00 0.00 0.00 2.27
1531 3251 6.530120 TCTTCACCTGTGCATTCTACTTTTA 58.470 36.000 0.00 0.00 0.00 1.52
1543 3263 8.504005 TGCATTCTACTTTTAGAAGCAAAGTAC 58.496 33.333 12.28 0.00 45.57 2.73
1576 3296 2.351738 GCTTTTCGTTCCCTGAACATGG 60.352 50.000 7.64 0.00 42.05 3.66
1592 3312 5.123820 TGAACATGGCAAGCATACTCTTTAC 59.876 40.000 0.00 0.00 0.00 2.01
1634 4051 6.877236 TCATGTGCACTCTGTTATCTATGAA 58.123 36.000 19.41 0.00 0.00 2.57
1650 4067 1.663695 TGAAGCGCCCTTTATGCTAC 58.336 50.000 2.29 0.00 38.17 3.58
1652 4069 2.222027 GAAGCGCCCTTTATGCTACAT 58.778 47.619 2.29 0.00 38.17 2.29
1678 4099 8.589335 TTAGTATTGTTCACAACTCTGAACTC 57.411 34.615 12.08 2.91 46.97 3.01
1682 4103 4.051237 TGTTCACAACTCTGAACTCATCG 58.949 43.478 12.08 0.00 46.97 3.84
1695 4116 0.246086 CTCATCGCCCAGATAGCTCC 59.754 60.000 0.00 0.00 37.52 4.70
1714 4135 3.691575 TCCGAATACCATTTTCTTGCCA 58.308 40.909 0.00 0.00 0.00 4.92
1742 4163 7.319646 GGAATTTTCCATTGTGTTATGTGCTA 58.680 34.615 4.43 0.00 46.76 3.49
1744 4165 8.931385 AATTTTCCATTGTGTTATGTGCTATC 57.069 30.769 0.00 0.00 0.00 2.08
1769 4190 8.041323 TCGTCTATGATGCTGTCATATAGAGTA 58.959 37.037 11.19 0.67 46.07 2.59
1770 4191 8.119845 CGTCTATGATGCTGTCATATAGAGTAC 58.880 40.741 11.19 0.00 46.07 2.73
1771 4192 9.173021 GTCTATGATGCTGTCATATAGAGTACT 57.827 37.037 11.19 0.00 46.07 2.73
1772 4193 9.171877 TCTATGATGCTGTCATATAGAGTACTG 57.828 37.037 0.00 0.00 46.07 2.74
1773 4194 7.773489 ATGATGCTGTCATATAGAGTACTGT 57.227 36.000 0.00 0.00 45.67 3.55
1863 4297 1.859383 TTCTGACGACGAAATGTGCA 58.141 45.000 0.00 0.00 0.00 4.57
1864 4298 1.136690 TCTGACGACGAAATGTGCAC 58.863 50.000 10.75 10.75 0.00 4.57
1865 4299 1.139989 CTGACGACGAAATGTGCACT 58.860 50.000 19.41 0.00 0.00 4.40
1866 4300 0.858583 TGACGACGAAATGTGCACTG 59.141 50.000 19.41 5.31 0.00 3.66
1867 4301 0.859232 GACGACGAAATGTGCACTGT 59.141 50.000 19.41 8.56 0.00 3.55
1868 4302 1.260561 GACGACGAAATGTGCACTGTT 59.739 47.619 19.41 11.76 0.00 3.16
1869 4303 1.668751 ACGACGAAATGTGCACTGTTT 59.331 42.857 19.41 17.95 0.00 2.83
1870 4304 2.036217 CGACGAAATGTGCACTGTTTG 58.964 47.619 19.41 16.71 0.00 2.93
1871 4305 2.384382 GACGAAATGTGCACTGTTTGG 58.616 47.619 19.41 19.87 0.00 3.28
1872 4306 1.748493 ACGAAATGTGCACTGTTTGGT 59.252 42.857 19.41 20.44 0.00 3.67
1873 4307 2.118683 CGAAATGTGCACTGTTTGGTG 58.881 47.619 19.41 7.62 39.91 4.17
1874 4308 2.472816 GAAATGTGCACTGTTTGGTGG 58.527 47.619 19.41 0.00 37.65 4.61
1875 4309 1.774110 AATGTGCACTGTTTGGTGGA 58.226 45.000 19.41 0.00 37.65 4.02
1878 4312 2.937519 TGTGCACTGTTTGGTGGATAA 58.062 42.857 19.41 0.00 39.53 1.75
1922 4356 5.880341 AGACAAACAAGTTACAGCTTTGAC 58.120 37.500 2.16 0.00 0.00 3.18
1936 4370 3.865745 AGCTTTGACGGATATCTCAAACG 59.134 43.478 13.39 11.33 33.73 3.60
2220 4654 3.631714 CGTCGAGTAGAAGCAGCAT 57.368 52.632 0.00 0.00 0.00 3.79
2223 4657 2.458951 GTCGAGTAGAAGCAGCATCAG 58.541 52.381 0.00 0.00 0.00 2.90
2244 4687 2.216046 CGGCATGAACTGTAGATGCAT 58.784 47.619 19.63 0.00 43.58 3.96
2246 4689 2.222678 GGCATGAACTGTAGATGCATCG 59.777 50.000 20.67 9.25 43.58 3.84
2280 4723 4.485163 GGGTTGTAAATGTGCTGTGATTC 58.515 43.478 0.00 0.00 0.00 2.52
2293 4736 1.375396 TGATTCGCCGTGTGAAGGG 60.375 57.895 6.16 0.00 35.49 3.95
2294 4737 1.079405 GATTCGCCGTGTGAAGGGA 60.079 57.895 6.16 0.00 35.49 4.20
2295 4738 0.672401 GATTCGCCGTGTGAAGGGAA 60.672 55.000 6.16 0.00 35.49 3.97
2296 4739 0.673644 ATTCGCCGTGTGAAGGGAAG 60.674 55.000 6.16 0.00 35.49 3.46
2297 4740 2.725203 TTCGCCGTGTGAAGGGAAGG 62.725 60.000 0.00 0.00 0.00 3.46
2360 4804 2.094234 GGTTTGTGCTTCTTGGTGTTGT 60.094 45.455 0.00 0.00 0.00 3.32
2399 4872 9.613428 CTGGTTGGATTCATAAAGACAGTATTA 57.387 33.333 0.00 0.00 0.00 0.98
2455 4931 1.135344 GTCGTGGTCCTGCTACTCTTC 60.135 57.143 0.00 0.00 0.00 2.87
2457 4933 0.889306 GTGGTCCTGCTACTCTTCGT 59.111 55.000 0.00 0.00 0.00 3.85
2474 4950 1.069022 TCGTGATGCTTTGCTGCTTTC 60.069 47.619 0.00 0.00 0.00 2.62
2493 4969 5.628606 GCTTTCAGATTGCTCTTCTTTTGAC 59.371 40.000 0.00 0.00 0.00 3.18
2510 5010 7.970384 TCTTTTGACGCACGATATATTCTTTT 58.030 30.769 0.00 0.00 0.00 2.27
2517 5017 9.910511 GACGCACGATATATTCTTTTTCTTTTA 57.089 29.630 0.00 0.00 0.00 1.52
2554 5054 7.915923 CAGTTAACTCCCTTTTCTTTCAGTTTC 59.084 37.037 4.77 0.00 0.00 2.78
2561 5061 8.221965 TCCCTTTTCTTTCAGTTTCTTAACTC 57.778 34.615 0.00 0.00 42.67 3.01
2656 5156 5.615289 AGAGAACACAGTTTCTGCTAACAT 58.385 37.500 3.55 0.00 35.90 2.71
2657 5157 6.058183 AGAGAACACAGTTTCTGCTAACATT 58.942 36.000 3.55 0.00 35.90 2.71
2700 5200 3.314080 GCTAACACAGTTTTGTAGTGGCA 59.686 43.478 0.00 0.00 37.58 4.92
2745 5245 1.719063 AATGATAGTGGGCCGGCCAT 61.719 55.000 44.46 30.42 37.98 4.40
2827 5327 9.590451 AATTATTGCAATGGAGAGTTTTGTATG 57.410 29.630 22.27 0.00 0.00 2.39
2983 5501 8.358895 TGCACATATCTTTTGAAAAGTTCATGA 58.641 29.630 22.69 0.00 39.84 3.07
2991 5555 9.165035 TCTTTTGAAAAGTTCATGAATTGCTTT 57.835 25.926 16.41 13.18 39.84 3.51
3017 5588 4.342862 AATATTCACAGATGTCCCTCCG 57.657 45.455 0.00 0.00 0.00 4.63
3082 5653 3.828875 AAAATTGGAAAAACGGCAGGA 57.171 38.095 0.00 0.00 0.00 3.86
3088 5659 1.818674 GGAAAAACGGCAGGATGTGAT 59.181 47.619 0.00 0.00 39.31 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 0.107508 CCCCTCTATGCACACCACAG 60.108 60.000 0.00 0.00 0.00 3.66
34 35 1.700042 CCCTCCCCTCTATGCACACC 61.700 65.000 0.00 0.00 0.00 4.16
69 70 1.602377 GAACACGCCCTTATATGTGCC 59.398 52.381 0.00 0.00 35.79 5.01
71 72 1.864711 CCGAACACGCCCTTATATGTG 59.135 52.381 0.00 0.00 38.28 3.21
80 81 3.195698 GAGCATCCGAACACGCCC 61.196 66.667 0.00 0.00 0.00 6.13
81 82 2.125512 AGAGCATCCGAACACGCC 60.126 61.111 0.00 0.00 33.66 5.68
82 83 2.167861 GGAGAGCATCCGAACACGC 61.168 63.158 0.00 0.00 38.67 5.34
83 84 4.094684 GGAGAGCATCCGAACACG 57.905 61.111 0.00 0.00 38.67 4.49
101 102 2.500646 GGAGCAGAGCTGAGGAGC 59.499 66.667 0.85 0.00 46.64 4.70
102 103 2.784356 CGGGAGCAGAGCTGAGGAG 61.784 68.421 0.85 0.00 39.88 3.69
103 104 2.757508 CGGGAGCAGAGCTGAGGA 60.758 66.667 0.85 0.00 39.88 3.71
104 105 3.847602 CCGGGAGCAGAGCTGAGG 61.848 72.222 0.85 0.00 39.88 3.86
105 106 2.757508 TCCGGGAGCAGAGCTGAG 60.758 66.667 0.00 0.00 39.88 3.35
106 107 2.757508 CTCCGGGAGCAGAGCTGA 60.758 66.667 11.83 0.00 39.88 4.26
107 108 2.654079 AACTCCGGGAGCAGAGCTG 61.654 63.158 23.84 0.00 39.88 4.24
108 109 2.284258 AACTCCGGGAGCAGAGCT 60.284 61.111 23.84 0.00 43.88 4.09
109 110 1.965754 ATCAACTCCGGGAGCAGAGC 61.966 60.000 23.84 0.00 33.18 4.09
110 111 0.179089 CATCAACTCCGGGAGCAGAG 60.179 60.000 23.84 11.06 36.16 3.35
111 112 1.617018 CCATCAACTCCGGGAGCAGA 61.617 60.000 23.84 20.48 32.04 4.26
112 113 1.153289 CCATCAACTCCGGGAGCAG 60.153 63.158 23.84 15.97 32.04 4.24
113 114 1.612146 TCCATCAACTCCGGGAGCA 60.612 57.895 23.84 8.61 32.04 4.26
114 115 1.144936 CTCCATCAACTCCGGGAGC 59.855 63.158 23.84 0.00 40.37 4.70
116 117 1.198094 TTGCTCCATCAACTCCGGGA 61.198 55.000 0.00 0.00 0.00 5.14
117 118 1.026718 GTTGCTCCATCAACTCCGGG 61.027 60.000 0.00 0.00 42.15 5.73
118 119 1.361668 CGTTGCTCCATCAACTCCGG 61.362 60.000 0.00 0.00 42.98 5.14
119 120 1.970917 GCGTTGCTCCATCAACTCCG 61.971 60.000 5.30 0.00 42.98 4.63
120 121 1.648467 GGCGTTGCTCCATCAACTCC 61.648 60.000 5.30 3.05 42.36 3.85
121 122 1.796796 GGCGTTGCTCCATCAACTC 59.203 57.895 5.30 0.00 42.98 3.01
122 123 2.034879 CGGCGTTGCTCCATCAACT 61.035 57.895 0.00 0.00 42.98 3.16
123 124 1.573829 TTCGGCGTTGCTCCATCAAC 61.574 55.000 6.85 0.00 42.04 3.18
124 125 1.302112 TTCGGCGTTGCTCCATCAA 60.302 52.632 6.85 0.00 0.00 2.57
125 126 2.032634 GTTCGGCGTTGCTCCATCA 61.033 57.895 6.85 0.00 0.00 3.07
126 127 1.970917 CTGTTCGGCGTTGCTCCATC 61.971 60.000 6.85 0.00 0.00 3.51
127 128 2.031919 TGTTCGGCGTTGCTCCAT 59.968 55.556 6.85 0.00 0.00 3.41
128 129 2.664851 CTGTTCGGCGTTGCTCCA 60.665 61.111 6.85 0.00 0.00 3.86
129 130 2.775032 TACCTGTTCGGCGTTGCTCC 62.775 60.000 6.85 0.00 35.61 4.70
130 131 0.947180 TTACCTGTTCGGCGTTGCTC 60.947 55.000 6.85 0.00 35.61 4.26
131 132 0.533308 TTTACCTGTTCGGCGTTGCT 60.533 50.000 6.85 0.00 35.61 3.91
132 133 0.385098 GTTTACCTGTTCGGCGTTGC 60.385 55.000 6.85 0.00 35.61 4.17
133 134 1.193874 GAGTTTACCTGTTCGGCGTTG 59.806 52.381 6.85 0.00 35.61 4.10
134 135 1.505425 GAGTTTACCTGTTCGGCGTT 58.495 50.000 6.85 0.00 35.61 4.84
135 136 0.320160 GGAGTTTACCTGTTCGGCGT 60.320 55.000 6.85 0.00 35.61 5.68
136 137 1.349259 CGGAGTTTACCTGTTCGGCG 61.349 60.000 0.00 0.00 35.61 6.46
137 138 0.320160 ACGGAGTTTACCTGTTCGGC 60.320 55.000 0.00 0.00 37.78 5.54
138 139 1.425412 CACGGAGTTTACCTGTTCGG 58.575 55.000 0.00 0.00 41.61 4.30
139 140 1.000060 TCCACGGAGTTTACCTGTTCG 60.000 52.381 0.00 0.00 41.61 3.95
140 141 2.685100 CTCCACGGAGTTTACCTGTTC 58.315 52.381 4.83 0.00 41.61 3.18
141 142 2.833631 CTCCACGGAGTTTACCTGTT 57.166 50.000 4.83 0.00 41.61 3.16
154 155 0.604578 TCCCCGTTTTCTACTCCACG 59.395 55.000 0.00 0.00 0.00 4.94
155 156 1.675116 GCTCCCCGTTTTCTACTCCAC 60.675 57.143 0.00 0.00 0.00 4.02
156 157 0.611714 GCTCCCCGTTTTCTACTCCA 59.388 55.000 0.00 0.00 0.00 3.86
157 158 0.459759 CGCTCCCCGTTTTCTACTCC 60.460 60.000 0.00 0.00 0.00 3.85
158 159 0.459759 CCGCTCCCCGTTTTCTACTC 60.460 60.000 0.00 0.00 34.38 2.59
159 160 0.901580 TCCGCTCCCCGTTTTCTACT 60.902 55.000 0.00 0.00 34.38 2.57
160 161 0.459759 CTCCGCTCCCCGTTTTCTAC 60.460 60.000 0.00 0.00 34.38 2.59
161 162 1.895238 CTCCGCTCCCCGTTTTCTA 59.105 57.895 0.00 0.00 34.38 2.10
162 163 2.663196 CTCCGCTCCCCGTTTTCT 59.337 61.111 0.00 0.00 34.38 2.52
163 164 3.125573 GCTCCGCTCCCCGTTTTC 61.126 66.667 0.00 0.00 34.38 2.29
164 165 3.637273 AGCTCCGCTCCCCGTTTT 61.637 61.111 0.00 0.00 30.62 2.43
165 166 4.394712 CAGCTCCGCTCCCCGTTT 62.395 66.667 0.00 0.00 36.40 3.60
169 170 3.081409 TAACCAGCTCCGCTCCCC 61.081 66.667 0.00 0.00 36.40 4.81
170 171 2.187163 GTAACCAGCTCCGCTCCC 59.813 66.667 0.00 0.00 36.40 4.30
171 172 1.153549 CTGTAACCAGCTCCGCTCC 60.154 63.158 0.00 0.00 36.40 4.70
172 173 1.153549 CCTGTAACCAGCTCCGCTC 60.154 63.158 0.00 0.00 36.40 5.03
173 174 1.913762 ACCTGTAACCAGCTCCGCT 60.914 57.895 0.00 0.00 40.77 5.52
174 175 1.741770 CACCTGTAACCAGCTCCGC 60.742 63.158 0.00 0.00 37.38 5.54
175 176 0.320374 TTCACCTGTAACCAGCTCCG 59.680 55.000 0.00 0.00 37.38 4.63
176 177 2.561478 TTTCACCTGTAACCAGCTCC 57.439 50.000 0.00 0.00 37.38 4.70
177 178 4.321230 CCATTTTTCACCTGTAACCAGCTC 60.321 45.833 0.00 0.00 37.38 4.09
178 179 3.573967 CCATTTTTCACCTGTAACCAGCT 59.426 43.478 0.00 0.00 37.38 4.24
179 180 3.306019 CCCATTTTTCACCTGTAACCAGC 60.306 47.826 0.00 0.00 37.38 4.85
180 181 3.258123 CCCCATTTTTCACCTGTAACCAG 59.742 47.826 0.00 0.00 38.50 4.00
181 182 3.117093 TCCCCATTTTTCACCTGTAACCA 60.117 43.478 0.00 0.00 0.00 3.67
182 183 3.502356 TCCCCATTTTTCACCTGTAACC 58.498 45.455 0.00 0.00 0.00 2.85
183 184 3.056821 GCTCCCCATTTTTCACCTGTAAC 60.057 47.826 0.00 0.00 0.00 2.50
184 185 3.161866 GCTCCCCATTTTTCACCTGTAA 58.838 45.455 0.00 0.00 0.00 2.41
185 186 2.378547 AGCTCCCCATTTTTCACCTGTA 59.621 45.455 0.00 0.00 0.00 2.74
186 187 1.147817 AGCTCCCCATTTTTCACCTGT 59.852 47.619 0.00 0.00 0.00 4.00
187 188 1.547372 CAGCTCCCCATTTTTCACCTG 59.453 52.381 0.00 0.00 0.00 4.00
188 189 1.928868 CAGCTCCCCATTTTTCACCT 58.071 50.000 0.00 0.00 0.00 4.00
189 190 0.247460 GCAGCTCCCCATTTTTCACC 59.753 55.000 0.00 0.00 0.00 4.02
190 191 1.260544 AGCAGCTCCCCATTTTTCAC 58.739 50.000 0.00 0.00 0.00 3.18
191 192 2.897271 TAGCAGCTCCCCATTTTTCA 57.103 45.000 0.00 0.00 0.00 2.69
192 193 4.403752 AGAAATAGCAGCTCCCCATTTTTC 59.596 41.667 0.00 0.00 0.00 2.29
193 194 4.161001 CAGAAATAGCAGCTCCCCATTTTT 59.839 41.667 0.00 0.00 0.00 1.94
194 195 3.703052 CAGAAATAGCAGCTCCCCATTTT 59.297 43.478 0.00 0.00 0.00 1.82
195 196 3.053395 TCAGAAATAGCAGCTCCCCATTT 60.053 43.478 0.00 0.00 0.00 2.32
196 197 2.511218 TCAGAAATAGCAGCTCCCCATT 59.489 45.455 0.00 0.00 0.00 3.16
197 198 2.106166 CTCAGAAATAGCAGCTCCCCAT 59.894 50.000 0.00 0.00 0.00 4.00
198 199 1.487976 CTCAGAAATAGCAGCTCCCCA 59.512 52.381 0.00 0.00 0.00 4.96
199 200 1.765314 TCTCAGAAATAGCAGCTCCCC 59.235 52.381 0.00 0.00 0.00 4.81
200 201 3.181456 ACATCTCAGAAATAGCAGCTCCC 60.181 47.826 0.00 0.00 0.00 4.30
201 202 3.808726 CACATCTCAGAAATAGCAGCTCC 59.191 47.826 0.00 0.00 0.00 4.70
202 203 4.691175 TCACATCTCAGAAATAGCAGCTC 58.309 43.478 0.00 0.00 0.00 4.09
203 204 4.405036 TCTCACATCTCAGAAATAGCAGCT 59.595 41.667 0.00 0.00 0.00 4.24
204 205 4.691175 TCTCACATCTCAGAAATAGCAGC 58.309 43.478 0.00 0.00 0.00 5.25
205 206 5.927689 GGATCTCACATCTCAGAAATAGCAG 59.072 44.000 0.00 0.00 0.00 4.24
206 207 5.601729 AGGATCTCACATCTCAGAAATAGCA 59.398 40.000 0.00 0.00 0.00 3.49
207 208 6.100404 AGGATCTCACATCTCAGAAATAGC 57.900 41.667 0.00 0.00 0.00 2.97
210 211 9.558396 GATTTAAGGATCTCACATCTCAGAAAT 57.442 33.333 0.00 0.00 0.00 2.17
211 212 8.542926 TGATTTAAGGATCTCACATCTCAGAAA 58.457 33.333 0.00 0.00 0.00 2.52
212 213 8.082672 TGATTTAAGGATCTCACATCTCAGAA 57.917 34.615 0.00 0.00 0.00 3.02
213 214 7.666063 TGATTTAAGGATCTCACATCTCAGA 57.334 36.000 0.00 0.00 0.00 3.27
214 215 8.367943 CTTGATTTAAGGATCTCACATCTCAG 57.632 38.462 0.00 0.00 32.56 3.35
241 242 9.899226 GCAGTTTTCTTGTAAATCTTATCAACT 57.101 29.630 0.00 0.00 0.00 3.16
242 243 9.129209 GGCAGTTTTCTTGTAAATCTTATCAAC 57.871 33.333 0.00 0.00 0.00 3.18
243 244 8.855110 TGGCAGTTTTCTTGTAAATCTTATCAA 58.145 29.630 0.00 0.00 0.00 2.57
244 245 8.296713 GTGGCAGTTTTCTTGTAAATCTTATCA 58.703 33.333 0.00 0.00 0.00 2.15
245 246 7.755373 GGTGGCAGTTTTCTTGTAAATCTTATC 59.245 37.037 0.00 0.00 0.00 1.75
246 247 7.574967 CGGTGGCAGTTTTCTTGTAAATCTTAT 60.575 37.037 0.00 0.00 0.00 1.73
247 248 6.293735 CGGTGGCAGTTTTCTTGTAAATCTTA 60.294 38.462 0.00 0.00 0.00 2.10
248 249 5.507315 CGGTGGCAGTTTTCTTGTAAATCTT 60.507 40.000 0.00 0.00 0.00 2.40
249 250 4.023193 CGGTGGCAGTTTTCTTGTAAATCT 60.023 41.667 0.00 0.00 0.00 2.40
250 251 4.226761 CGGTGGCAGTTTTCTTGTAAATC 58.773 43.478 0.00 0.00 0.00 2.17
251 252 3.552068 GCGGTGGCAGTTTTCTTGTAAAT 60.552 43.478 0.00 0.00 39.62 1.40
252 253 2.223618 GCGGTGGCAGTTTTCTTGTAAA 60.224 45.455 0.00 0.00 39.62 2.01
253 254 1.335496 GCGGTGGCAGTTTTCTTGTAA 59.665 47.619 0.00 0.00 39.62 2.41
254 255 0.948678 GCGGTGGCAGTTTTCTTGTA 59.051 50.000 0.00 0.00 39.62 2.41
255 256 1.733526 GCGGTGGCAGTTTTCTTGT 59.266 52.632 0.00 0.00 39.62 3.16
256 257 1.007387 GGCGGTGGCAGTTTTCTTG 60.007 57.895 0.00 0.00 42.47 3.02
257 258 1.040339 TTGGCGGTGGCAGTTTTCTT 61.040 50.000 0.00 0.00 42.47 2.52
258 259 1.454847 TTGGCGGTGGCAGTTTTCT 60.455 52.632 0.00 0.00 42.47 2.52
259 260 1.007387 CTTGGCGGTGGCAGTTTTC 60.007 57.895 0.00 0.00 42.47 2.29
260 261 1.756561 ACTTGGCGGTGGCAGTTTT 60.757 52.632 0.00 0.00 42.47 2.43
261 262 2.123897 ACTTGGCGGTGGCAGTTT 60.124 55.556 0.00 0.00 42.47 2.66
262 263 2.902423 TTCACTTGGCGGTGGCAGTT 62.902 55.000 9.83 0.00 42.47 3.16
263 264 2.902423 TTTCACTTGGCGGTGGCAGT 62.902 55.000 9.83 0.00 42.47 4.40
264 265 1.733402 TTTTCACTTGGCGGTGGCAG 61.733 55.000 9.83 0.00 42.47 4.85
265 266 1.754621 TTTTCACTTGGCGGTGGCA 60.755 52.632 9.83 0.00 42.47 4.92
266 267 1.299850 GTTTTCACTTGGCGGTGGC 60.300 57.895 9.83 0.00 37.75 5.01
267 268 1.008995 CGTTTTCACTTGGCGGTGG 60.009 57.895 9.83 0.00 37.75 4.61
268 269 1.008995 CCGTTTTCACTTGGCGGTG 60.009 57.895 4.38 4.38 37.87 4.94
269 270 3.427670 CCGTTTTCACTTGGCGGT 58.572 55.556 0.00 0.00 37.87 5.68
270 271 0.317519 GAACCGTTTTCACTTGGCGG 60.318 55.000 0.00 0.00 46.83 6.13
271 272 0.656205 CGAACCGTTTTCACTTGGCG 60.656 55.000 0.00 0.00 0.00 5.69
272 273 0.933047 GCGAACCGTTTTCACTTGGC 60.933 55.000 0.00 0.00 0.00 4.52
273 274 0.656205 CGCGAACCGTTTTCACTTGG 60.656 55.000 0.00 0.00 0.00 3.61
274 275 1.259544 GCGCGAACCGTTTTCACTTG 61.260 55.000 12.10 0.00 39.71 3.16
275 276 1.010462 GCGCGAACCGTTTTCACTT 60.010 52.632 12.10 0.00 39.71 3.16
276 277 2.629763 GCGCGAACCGTTTTCACT 59.370 55.556 12.10 0.00 39.71 3.41
277 278 2.789723 CGCGCGAACCGTTTTCAC 60.790 61.111 28.94 0.00 39.71 3.18
278 279 4.653252 GCGCGCGAACCGTTTTCA 62.653 61.111 37.18 0.00 39.71 2.69
294 295 4.681978 AGCGAGTTGGACGTGGGC 62.682 66.667 0.00 0.00 0.00 5.36
295 296 2.432628 GAGCGAGTTGGACGTGGG 60.433 66.667 0.00 0.00 0.00 4.61
296 297 2.805353 CGAGCGAGTTGGACGTGG 60.805 66.667 0.00 0.00 0.00 4.94
297 298 1.606350 GAACGAGCGAGTTGGACGTG 61.606 60.000 0.00 0.00 37.28 4.49
298 299 1.371389 GAACGAGCGAGTTGGACGT 60.371 57.895 4.63 0.00 38.81 4.34
299 300 2.087009 GGAACGAGCGAGTTGGACG 61.087 63.158 4.63 0.00 34.00 4.79
300 301 1.009389 CAGGAACGAGCGAGTTGGAC 61.009 60.000 4.63 0.00 34.00 4.02
301 302 1.289066 CAGGAACGAGCGAGTTGGA 59.711 57.895 4.63 0.00 34.00 3.53
302 303 0.600255 AACAGGAACGAGCGAGTTGG 60.600 55.000 4.63 0.00 34.00 3.77
303 304 1.192534 GAAACAGGAACGAGCGAGTTG 59.807 52.381 4.63 0.00 34.00 3.16
304 305 1.499049 GAAACAGGAACGAGCGAGTT 58.501 50.000 0.00 0.00 36.99 3.01
305 306 0.319641 GGAAACAGGAACGAGCGAGT 60.320 55.000 0.00 0.00 0.00 4.18
306 307 0.319555 TGGAAACAGGAACGAGCGAG 60.320 55.000 0.00 0.00 35.01 5.03
307 308 0.599204 GTGGAAACAGGAACGAGCGA 60.599 55.000 0.00 0.00 44.46 4.93
308 309 1.860078 GTGGAAACAGGAACGAGCG 59.140 57.895 0.00 0.00 44.46 5.03
317 318 2.281761 AGCTGGGCGTGGAAACAG 60.282 61.111 0.00 0.00 44.46 3.16
318 319 2.281484 GAGCTGGGCGTGGAAACA 60.281 61.111 0.00 0.00 38.70 2.83
319 320 3.056328 GGAGCTGGGCGTGGAAAC 61.056 66.667 0.00 0.00 0.00 2.78
320 321 3.565214 TGGAGCTGGGCGTGGAAA 61.565 61.111 0.00 0.00 0.00 3.13
321 322 4.329545 GTGGAGCTGGGCGTGGAA 62.330 66.667 0.00 0.00 0.00 3.53
327 328 3.733344 TATTCGCGTGGAGCTGGGC 62.733 63.158 5.77 0.00 45.59 5.36
328 329 1.592669 CTATTCGCGTGGAGCTGGG 60.593 63.158 5.77 0.00 45.59 4.45
329 330 1.592669 CCTATTCGCGTGGAGCTGG 60.593 63.158 5.77 0.00 45.59 4.85
330 331 1.592669 CCCTATTCGCGTGGAGCTG 60.593 63.158 5.77 0.00 45.59 4.24
331 332 1.739338 CTCCCTATTCGCGTGGAGCT 61.739 60.000 5.77 0.00 45.59 4.09
332 333 1.300233 CTCCCTATTCGCGTGGAGC 60.300 63.158 5.77 0.00 38.12 4.70
333 334 1.300233 GCTCCCTATTCGCGTGGAG 60.300 63.158 19.40 19.40 45.83 3.86
334 335 2.016393 CTGCTCCCTATTCGCGTGGA 62.016 60.000 5.77 5.01 0.00 4.02
335 336 1.592669 CTGCTCCCTATTCGCGTGG 60.593 63.158 5.77 4.60 0.00 4.94
336 337 0.596083 CTCTGCTCCCTATTCGCGTG 60.596 60.000 5.77 0.00 0.00 5.34
337 338 1.736586 CTCTGCTCCCTATTCGCGT 59.263 57.895 5.77 0.00 0.00 6.01
338 339 1.663074 GCTCTGCTCCCTATTCGCG 60.663 63.158 0.00 0.00 0.00 5.87
339 340 0.599728 CAGCTCTGCTCCCTATTCGC 60.600 60.000 0.00 0.00 36.40 4.70
340 341 3.584586 CAGCTCTGCTCCCTATTCG 57.415 57.895 0.00 0.00 36.40 3.34
341 342 2.652251 AGGCAGCTCTGCTCCCTATTC 61.652 57.143 19.76 2.68 46.24 1.75
342 343 0.693767 AGGCAGCTCTGCTCCCTATT 60.694 55.000 19.76 0.00 46.24 1.73
343 344 1.074623 AGGCAGCTCTGCTCCCTAT 60.075 57.895 19.76 0.00 46.24 2.57
344 345 2.062777 CAGGCAGCTCTGCTCCCTA 61.063 63.158 19.76 0.00 46.38 3.53
351 352 3.123620 GTTCGGCAGGCAGCTCTG 61.124 66.667 0.81 6.54 44.79 3.35
352 353 2.866085 GATGTTCGGCAGGCAGCTCT 62.866 60.000 0.81 0.00 44.79 4.09
353 354 2.437359 ATGTTCGGCAGGCAGCTC 60.437 61.111 0.81 0.00 44.79 4.09
354 355 2.437359 GATGTTCGGCAGGCAGCT 60.437 61.111 0.81 0.00 44.79 4.24
355 356 2.437359 AGATGTTCGGCAGGCAGC 60.437 61.111 0.00 0.00 44.65 5.25
356 357 2.169789 CGAGATGTTCGGCAGGCAG 61.170 63.158 0.00 0.00 45.54 4.85
357 358 2.125552 CGAGATGTTCGGCAGGCA 60.126 61.111 0.00 0.00 45.54 4.75
365 366 2.759538 AGCGCTAGTACGAGATGTTC 57.240 50.000 8.99 0.00 34.06 3.18
366 367 4.832590 AATAGCGCTAGTACGAGATGTT 57.167 40.909 23.37 5.03 34.06 2.71
367 368 4.832590 AAATAGCGCTAGTACGAGATGT 57.167 40.909 23.37 0.00 34.06 3.06
368 369 5.453648 AGAAAATAGCGCTAGTACGAGATG 58.546 41.667 23.37 0.00 34.06 2.90
369 370 5.692613 AGAAAATAGCGCTAGTACGAGAT 57.307 39.130 23.37 0.66 34.06 2.75
370 371 5.525012 TGTAGAAAATAGCGCTAGTACGAGA 59.475 40.000 23.37 9.95 34.06 4.04
371 372 5.745514 TGTAGAAAATAGCGCTAGTACGAG 58.254 41.667 23.37 0.00 34.06 4.18
372 373 5.739752 TGTAGAAAATAGCGCTAGTACGA 57.260 39.130 23.37 11.26 34.06 3.43
373 374 5.398711 CCTTGTAGAAAATAGCGCTAGTACG 59.601 44.000 23.37 1.59 0.00 3.67
374 375 6.501781 TCCTTGTAGAAAATAGCGCTAGTAC 58.498 40.000 23.37 15.06 0.00 2.73
375 376 6.320672 ACTCCTTGTAGAAAATAGCGCTAGTA 59.679 38.462 23.37 1.13 0.00 1.82
376 377 5.127356 ACTCCTTGTAGAAAATAGCGCTAGT 59.873 40.000 23.37 18.25 0.00 2.57
377 378 5.460419 CACTCCTTGTAGAAAATAGCGCTAG 59.540 44.000 23.37 7.88 0.00 3.42
378 379 5.348986 CACTCCTTGTAGAAAATAGCGCTA 58.651 41.667 21.30 21.30 0.00 4.26
379 380 4.184629 CACTCCTTGTAGAAAATAGCGCT 58.815 43.478 17.26 17.26 0.00 5.92
380 381 3.309954 CCACTCCTTGTAGAAAATAGCGC 59.690 47.826 0.00 0.00 0.00 5.92
381 382 3.309954 GCCACTCCTTGTAGAAAATAGCG 59.690 47.826 0.00 0.00 0.00 4.26
382 383 4.261801 TGCCACTCCTTGTAGAAAATAGC 58.738 43.478 0.00 0.00 0.00 2.97
383 384 7.337942 AGAAATGCCACTCCTTGTAGAAAATAG 59.662 37.037 0.00 0.00 0.00 1.73
384 385 7.121168 CAGAAATGCCACTCCTTGTAGAAAATA 59.879 37.037 0.00 0.00 0.00 1.40
385 386 6.012745 AGAAATGCCACTCCTTGTAGAAAAT 58.987 36.000 0.00 0.00 0.00 1.82
386 387 5.241506 CAGAAATGCCACTCCTTGTAGAAAA 59.758 40.000 0.00 0.00 0.00 2.29
387 388 4.761739 CAGAAATGCCACTCCTTGTAGAAA 59.238 41.667 0.00 0.00 0.00 2.52
388 389 4.326826 CAGAAATGCCACTCCTTGTAGAA 58.673 43.478 0.00 0.00 0.00 2.10
389 390 3.307691 CCAGAAATGCCACTCCTTGTAGA 60.308 47.826 0.00 0.00 0.00 2.59
390 391 3.012518 CCAGAAATGCCACTCCTTGTAG 58.987 50.000 0.00 0.00 0.00 2.74
391 392 2.375174 ACCAGAAATGCCACTCCTTGTA 59.625 45.455 0.00 0.00 0.00 2.41
392 393 1.145738 ACCAGAAATGCCACTCCTTGT 59.854 47.619 0.00 0.00 0.00 3.16
393 394 1.542915 CACCAGAAATGCCACTCCTTG 59.457 52.381 0.00 0.00 0.00 3.61
394 395 1.548582 CCACCAGAAATGCCACTCCTT 60.549 52.381 0.00 0.00 0.00 3.36
395 396 0.038744 CCACCAGAAATGCCACTCCT 59.961 55.000 0.00 0.00 0.00 3.69
396 397 0.038166 TCCACCAGAAATGCCACTCC 59.962 55.000 0.00 0.00 0.00 3.85
397 398 1.003580 TCTCCACCAGAAATGCCACTC 59.996 52.381 0.00 0.00 0.00 3.51
398 399 1.067295 TCTCCACCAGAAATGCCACT 58.933 50.000 0.00 0.00 0.00 4.00
399 400 1.815003 CTTCTCCACCAGAAATGCCAC 59.185 52.381 0.00 0.00 40.83 5.01
400 401 1.887956 GCTTCTCCACCAGAAATGCCA 60.888 52.381 0.00 0.00 40.83 4.92
401 402 0.813821 GCTTCTCCACCAGAAATGCC 59.186 55.000 0.00 0.00 40.83 4.40
402 403 0.449388 CGCTTCTCCACCAGAAATGC 59.551 55.000 0.00 0.00 40.83 3.56
403 404 1.089920 CCGCTTCTCCACCAGAAATG 58.910 55.000 0.00 0.00 40.83 2.32
404 405 0.035056 CCCGCTTCTCCACCAGAAAT 60.035 55.000 0.00 0.00 40.83 2.17
405 406 1.125093 TCCCGCTTCTCCACCAGAAA 61.125 55.000 0.00 0.00 40.83 2.52
406 407 1.535444 TCCCGCTTCTCCACCAGAA 60.535 57.895 0.00 0.00 38.95 3.02
407 408 1.984570 CTCCCGCTTCTCCACCAGA 60.985 63.158 0.00 0.00 0.00 3.86
408 409 1.831652 AACTCCCGCTTCTCCACCAG 61.832 60.000 0.00 0.00 0.00 4.00
409 410 1.841556 AACTCCCGCTTCTCCACCA 60.842 57.895 0.00 0.00 0.00 4.17
410 411 1.376037 CAACTCCCGCTTCTCCACC 60.376 63.158 0.00 0.00 0.00 4.61
411 412 0.390472 CTCAACTCCCGCTTCTCCAC 60.390 60.000 0.00 0.00 0.00 4.02
412 413 1.544825 CCTCAACTCCCGCTTCTCCA 61.545 60.000 0.00 0.00 0.00 3.86
413 414 1.219393 CCTCAACTCCCGCTTCTCC 59.781 63.158 0.00 0.00 0.00 3.71
414 415 0.827368 ATCCTCAACTCCCGCTTCTC 59.173 55.000 0.00 0.00 0.00 2.87
415 416 1.208293 GAATCCTCAACTCCCGCTTCT 59.792 52.381 0.00 0.00 0.00 2.85
416 417 1.657822 GAATCCTCAACTCCCGCTTC 58.342 55.000 0.00 0.00 0.00 3.86
417 418 0.108138 CGAATCCTCAACTCCCGCTT 60.108 55.000 0.00 0.00 0.00 4.68
418 419 1.517832 CGAATCCTCAACTCCCGCT 59.482 57.895 0.00 0.00 0.00 5.52
419 420 1.521681 CCGAATCCTCAACTCCCGC 60.522 63.158 0.00 0.00 0.00 6.13
420 421 0.103208 CTCCGAATCCTCAACTCCCG 59.897 60.000 0.00 0.00 0.00 5.14
421 422 0.466124 CCTCCGAATCCTCAACTCCC 59.534 60.000 0.00 0.00 0.00 4.30
422 423 1.410882 CTCCTCCGAATCCTCAACTCC 59.589 57.143 0.00 0.00 0.00 3.85
423 424 1.202475 GCTCCTCCGAATCCTCAACTC 60.202 57.143 0.00 0.00 0.00 3.01
424 425 0.827368 GCTCCTCCGAATCCTCAACT 59.173 55.000 0.00 0.00 0.00 3.16
425 426 0.827368 AGCTCCTCCGAATCCTCAAC 59.173 55.000 0.00 0.00 0.00 3.18
426 427 0.826715 CAGCTCCTCCGAATCCTCAA 59.173 55.000 0.00 0.00 0.00 3.02
427 428 1.045350 CCAGCTCCTCCGAATCCTCA 61.045 60.000 0.00 0.00 0.00 3.86
428 429 0.757188 TCCAGCTCCTCCGAATCCTC 60.757 60.000 0.00 0.00 0.00 3.71
429 430 0.758685 CTCCAGCTCCTCCGAATCCT 60.759 60.000 0.00 0.00 0.00 3.24
430 431 1.745264 CTCCAGCTCCTCCGAATCC 59.255 63.158 0.00 0.00 0.00 3.01
431 432 1.068921 GCTCCAGCTCCTCCGAATC 59.931 63.158 0.00 0.00 38.21 2.52
432 433 1.053264 ATGCTCCAGCTCCTCCGAAT 61.053 55.000 0.00 0.00 42.66 3.34
433 434 1.680522 GATGCTCCAGCTCCTCCGAA 61.681 60.000 0.00 0.00 42.66 4.30
434 435 2.042537 ATGCTCCAGCTCCTCCGA 60.043 61.111 0.00 0.00 42.66 4.55
435 436 2.086251 GAGATGCTCCAGCTCCTCCG 62.086 65.000 0.00 0.00 40.51 4.63
436 437 1.747774 GAGATGCTCCAGCTCCTCC 59.252 63.158 0.00 0.00 40.51 4.30
445 446 0.037326 TGTGTGTTCGGAGATGCTCC 60.037 55.000 3.36 3.36 46.44 4.70
446 447 1.071605 GTGTGTGTTCGGAGATGCTC 58.928 55.000 0.00 0.00 35.04 4.26
447 448 0.681733 AGTGTGTGTTCGGAGATGCT 59.318 50.000 0.00 0.00 35.04 3.79
448 449 2.363788 TAGTGTGTGTTCGGAGATGC 57.636 50.000 0.00 0.00 35.04 3.91
449 450 4.150627 CACTTTAGTGTGTGTTCGGAGATG 59.849 45.833 1.69 0.00 40.96 2.90
450 451 4.307432 CACTTTAGTGTGTGTTCGGAGAT 58.693 43.478 1.69 0.00 40.96 2.75
451 452 3.713288 CACTTTAGTGTGTGTTCGGAGA 58.287 45.455 1.69 0.00 40.96 3.71
464 465 8.730680 GTGAACATAAATGGATGACACTTTAGT 58.269 33.333 0.00 0.00 36.17 2.24
465 466 8.729756 TGTGAACATAAATGGATGACACTTTAG 58.270 33.333 0.00 0.00 37.88 1.85
466 467 8.628630 TGTGAACATAAATGGATGACACTTTA 57.371 30.769 0.00 0.00 37.88 1.85
467 468 7.523293 TGTGAACATAAATGGATGACACTTT 57.477 32.000 0.00 0.00 37.88 2.66
490 492 9.726232 ACATTCATCGACTCATATTTTGAATTG 57.274 29.630 3.09 3.05 31.82 2.32
510 512 9.567776 TTCTTGGACTACTTATTTTGACATTCA 57.432 29.630 0.00 0.00 0.00 2.57
516 518 9.174166 GCCTTATTCTTGGACTACTTATTTTGA 57.826 33.333 0.00 0.00 0.00 2.69
522 526 7.857456 TCAATGCCTTATTCTTGGACTACTTA 58.143 34.615 0.00 0.00 0.00 2.24
527 533 6.662755 TGTATCAATGCCTTATTCTTGGACT 58.337 36.000 0.00 0.00 0.00 3.85
530 536 7.775120 ACTTTGTATCAATGCCTTATTCTTGG 58.225 34.615 0.00 0.00 0.00 3.61
591 598 7.708998 TCTTGTTGTTTTTCTGTATTACCCAC 58.291 34.615 0.00 0.00 0.00 4.61
592 599 7.558444 ACTCTTGTTGTTTTTCTGTATTACCCA 59.442 33.333 0.00 0.00 0.00 4.51
602 614 5.591877 AGCTCATCACTCTTGTTGTTTTTCT 59.408 36.000 0.00 0.00 0.00 2.52
603 615 5.825507 AGCTCATCACTCTTGTTGTTTTTC 58.174 37.500 0.00 0.00 0.00 2.29
607 620 4.757149 GGTTAGCTCATCACTCTTGTTGTT 59.243 41.667 0.00 0.00 0.00 2.83
615 628 4.323553 AATACCGGTTAGCTCATCACTC 57.676 45.455 15.04 0.00 0.00 3.51
659 672 6.183360 GCATTCTTGCGGCCTATATATGAAAT 60.183 38.462 0.00 0.00 39.49 2.17
660 673 5.123820 GCATTCTTGCGGCCTATATATGAAA 59.876 40.000 0.00 0.00 39.49 2.69
662 675 4.191544 GCATTCTTGCGGCCTATATATGA 58.808 43.478 0.00 0.00 39.49 2.15
663 676 4.542662 GCATTCTTGCGGCCTATATATG 57.457 45.455 0.00 0.00 39.49 1.78
704 717 9.109393 ACGACTGAGTATTATGTGCATATTTTT 57.891 29.630 0.00 0.00 0.00 1.94
774 892 2.436292 GCTCCAGGCTCAGCAGTG 60.436 66.667 0.00 0.00 38.06 3.66
827 1069 1.545651 CCCTCACACCTTTTCCTGACC 60.546 57.143 0.00 0.00 0.00 4.02
832 1074 2.573915 AGATCTCCCTCACACCTTTTCC 59.426 50.000 0.00 0.00 0.00 3.13
856 1098 2.664851 CGTGGGCGCTTTCTGTCA 60.665 61.111 7.64 0.00 0.00 3.58
858 1100 2.357517 CTCGTGGGCGCTTTCTGT 60.358 61.111 7.64 0.00 38.14 3.41
860 1102 2.048127 GTCTCGTGGGCGCTTTCT 60.048 61.111 7.64 0.00 38.14 2.52
861 1103 3.479269 CGTCTCGTGGGCGCTTTC 61.479 66.667 7.64 0.00 38.14 2.62
862 1104 3.916392 CTCGTCTCGTGGGCGCTTT 62.916 63.158 7.64 0.00 38.14 3.51
863 1105 4.421479 CTCGTCTCGTGGGCGCTT 62.421 66.667 7.64 0.00 38.14 4.68
865 1107 2.332362 TAATCTCGTCTCGTGGGCGC 62.332 60.000 0.00 0.00 38.14 6.53
866 1108 0.317103 CTAATCTCGTCTCGTGGGCG 60.317 60.000 0.00 0.00 39.92 6.13
867 1109 1.022735 TCTAATCTCGTCTCGTGGGC 58.977 55.000 0.00 0.00 0.00 5.36
868 1110 3.992260 AATCTAATCTCGTCTCGTGGG 57.008 47.619 0.00 0.00 0.00 4.61
869 1111 4.468643 GCTAATCTAATCTCGTCTCGTGG 58.531 47.826 0.00 0.00 0.00 4.94
870 1112 4.023963 TGGCTAATCTAATCTCGTCTCGTG 60.024 45.833 0.00 0.00 0.00 4.35
871 1113 4.135306 TGGCTAATCTAATCTCGTCTCGT 58.865 43.478 0.00 0.00 0.00 4.18
872 1114 4.750952 TGGCTAATCTAATCTCGTCTCG 57.249 45.455 0.00 0.00 0.00 4.04
873 1115 6.757010 TGTTTTGGCTAATCTAATCTCGTCTC 59.243 38.462 0.00 0.00 0.00 3.36
874 1116 6.640518 TGTTTTGGCTAATCTAATCTCGTCT 58.359 36.000 0.00 0.00 0.00 4.18
875 1117 6.903883 TGTTTTGGCTAATCTAATCTCGTC 57.096 37.500 0.00 0.00 0.00 4.20
895 1137 3.181491 CGGTGTGTGATTCTGGTTTTGTT 60.181 43.478 0.00 0.00 0.00 2.83
896 1138 2.357637 CGGTGTGTGATTCTGGTTTTGT 59.642 45.455 0.00 0.00 0.00 2.83
950 2639 3.974293 GCGGGTGGAAAAGGGGGA 61.974 66.667 0.00 0.00 0.00 4.81
956 2645 0.035439 GAGAGATGGCGGGTGGAAAA 60.035 55.000 0.00 0.00 0.00 2.29
967 2666 3.136750 CGGAGGCTGGAGAGATGG 58.863 66.667 0.00 0.00 0.00 3.51
1090 2789 1.067974 TCGTGCTTCAGTTTCCGAGAA 59.932 47.619 0.00 0.00 0.00 2.87
1320 3028 5.374921 CAGGAAGCATCAGGAACATCTAAT 58.625 41.667 0.00 0.00 0.00 1.73
1440 3160 1.222567 TAAGGGGAAGGGGAGATTGC 58.777 55.000 0.00 0.00 0.00 3.56
1478 3198 3.328382 TCCAGTTGACCAAATACGGAG 57.672 47.619 0.00 0.00 0.00 4.63
1479 3199 3.992943 ATCCAGTTGACCAAATACGGA 57.007 42.857 0.00 0.00 0.00 4.69
1480 3200 4.447724 CGATATCCAGTTGACCAAATACGG 59.552 45.833 0.00 0.00 0.00 4.02
1481 3201 5.047847 ACGATATCCAGTTGACCAAATACG 58.952 41.667 0.00 0.00 0.00 3.06
1482 3202 5.815740 ACACGATATCCAGTTGACCAAATAC 59.184 40.000 0.00 0.00 0.00 1.89
1529 3249 7.226720 CAGAAACCAAGAGTACTTTGCTTCTAA 59.773 37.037 19.01 0.00 34.35 2.10
1530 3250 6.706270 CAGAAACCAAGAGTACTTTGCTTCTA 59.294 38.462 19.01 0.00 34.35 2.10
1531 3251 5.529060 CAGAAACCAAGAGTACTTTGCTTCT 59.471 40.000 16.67 16.67 35.82 2.85
1543 3263 3.971032 ACGAAAAGCAGAAACCAAGAG 57.029 42.857 0.00 0.00 0.00 2.85
1602 3322 9.098355 GATAACAGAGTGCACATGATAGTTAAA 57.902 33.333 23.96 6.01 0.00 1.52
1634 4051 2.348411 AATGTAGCATAAAGGGCGCT 57.652 45.000 7.64 0.00 39.80 5.92
1669 4090 0.820226 TCTGGGCGATGAGTTCAGAG 59.180 55.000 0.00 0.00 31.73 3.35
1678 4099 1.080230 CGGAGCTATCTGGGCGATG 60.080 63.158 0.00 0.00 33.48 3.84
1682 4103 1.066787 GGTATTCGGAGCTATCTGGGC 60.067 57.143 0.00 0.00 32.18 5.36
1695 4116 3.438360 GCTGGCAAGAAAATGGTATTCG 58.562 45.455 0.00 0.00 32.04 3.34
1732 4153 6.034363 CAGCATCATAGACGATAGCACATAAC 59.966 42.308 0.00 0.00 42.67 1.89
1814 4240 9.440761 AAAGATACTTAGAGGTATCAAGGTGAT 57.559 33.333 12.67 0.00 46.08 3.06
1830 4256 7.587629 TCGTCGTCAGAAAAGAAAGATACTTA 58.412 34.615 0.00 0.00 0.00 2.24
1849 4282 1.295792 AACAGTGCACATTTCGTCGT 58.704 45.000 21.04 0.00 0.00 4.34
1863 4297 4.760204 GCTGTAACTTATCCACCAAACAGT 59.240 41.667 0.00 0.00 36.38 3.55
1864 4298 5.003804 AGCTGTAACTTATCCACCAAACAG 58.996 41.667 0.00 0.00 36.92 3.16
1865 4299 4.980573 AGCTGTAACTTATCCACCAAACA 58.019 39.130 0.00 0.00 0.00 2.83
1866 4300 5.959618 AAGCTGTAACTTATCCACCAAAC 57.040 39.130 0.00 0.00 0.00 2.93
1867 4301 6.065374 TCAAAGCTGTAACTTATCCACCAAA 58.935 36.000 0.00 0.00 0.00 3.28
1868 4302 5.626142 TCAAAGCTGTAACTTATCCACCAA 58.374 37.500 0.00 0.00 0.00 3.67
1869 4303 5.235850 TCAAAGCTGTAACTTATCCACCA 57.764 39.130 0.00 0.00 0.00 4.17
1870 4304 6.759497 AATCAAAGCTGTAACTTATCCACC 57.241 37.500 0.00 0.00 0.00 4.61
1871 4305 8.045176 AGAAATCAAAGCTGTAACTTATCCAC 57.955 34.615 0.00 0.00 0.00 4.02
1872 4306 9.905713 ATAGAAATCAAAGCTGTAACTTATCCA 57.094 29.630 0.00 0.00 0.00 3.41
1878 4312 9.944376 TTGTCTATAGAAATCAAAGCTGTAACT 57.056 29.630 3.40 0.00 0.00 2.24
1915 4349 3.544244 GCGTTTGAGATATCCGTCAAAGC 60.544 47.826 16.39 16.51 42.01 3.51
1922 4356 0.504384 CTGCGCGTTTGAGATATCCG 59.496 55.000 8.43 0.00 0.00 4.18
1936 4370 1.014044 TCGATGTCAAACTCCTGCGC 61.014 55.000 0.00 0.00 0.00 6.09
2220 4654 0.894835 TCTACAGTTCATGCCGCTGA 59.105 50.000 14.76 0.00 34.60 4.26
2223 4657 0.305922 GCATCTACAGTTCATGCCGC 59.694 55.000 5.43 0.00 37.54 6.53
2251 4694 1.272212 CACATTTACAACCCCACTGGC 59.728 52.381 0.00 0.00 37.83 4.85
2280 4723 2.742372 CCTTCCCTTCACACGGCG 60.742 66.667 4.80 4.80 0.00 6.46
2297 4740 2.044946 GTCCCACAGGGCATCACC 60.045 66.667 0.00 0.00 43.94 4.02
2339 4783 2.094234 ACAACACCAAGAAGCACAAACC 60.094 45.455 0.00 0.00 0.00 3.27
2399 4872 6.888632 ACCTGAATTTATCATGTCAAGAAGCT 59.111 34.615 0.00 0.00 37.44 3.74
2455 4931 1.334054 GAAAGCAGCAAAGCATCACG 58.666 50.000 0.00 0.00 36.85 4.35
2457 4933 2.232399 TCTGAAAGCAGCAAAGCATCA 58.768 42.857 0.00 0.00 42.01 3.07
2474 4950 3.058708 TGCGTCAAAAGAAGAGCAATCTG 60.059 43.478 0.00 0.00 0.00 2.90
2510 5010 9.847224 AGTTAACTGAACCTCTCATTAAAAGAA 57.153 29.630 7.48 0.00 39.02 2.52
2517 5017 4.846940 AGGGAGTTAACTGAACCTCTCATT 59.153 41.667 14.14 0.00 39.02 2.57
2529 5029 7.834681 AGAAACTGAAAGAAAAGGGAGTTAACT 59.165 33.333 8.13 8.13 37.43 2.24
2579 5079 9.462606 TCTCAAAAGAAAGGAGTTAAGAAACTT 57.537 29.630 0.00 0.00 46.09 2.66
2593 5093 8.214721 AGTTAACAGAACCTCTCAAAAGAAAG 57.785 34.615 8.61 0.00 0.00 2.62
2679 5179 4.554723 GCTGCCACTACAAAACTGTGTTAG 60.555 45.833 0.00 0.00 32.75 2.34
2715 5215 3.139025 CCCACTATCATTTCCCATCAGGT 59.861 47.826 0.00 0.00 36.75 4.00
2803 5303 8.028354 CACATACAAAACTCTCCATTGCAATAA 58.972 33.333 12.53 2.49 0.00 1.40
2827 5327 8.082242 AGGAACATGAGCAGTTTTTATTTACAC 58.918 33.333 0.00 0.00 0.00 2.90
2835 5335 6.959639 TTTCTAGGAACATGAGCAGTTTTT 57.040 33.333 0.00 0.00 0.00 1.94
2840 5340 8.218338 ACATTTATTTCTAGGAACATGAGCAG 57.782 34.615 0.00 0.00 0.00 4.24
2906 5423 1.633774 TAATTGGCCTCCCGCAAAAA 58.366 45.000 3.32 0.00 40.31 1.94
2907 5424 1.633774 TTAATTGGCCTCCCGCAAAA 58.366 45.000 3.32 0.00 40.31 2.44
2908 5425 1.633774 TTTAATTGGCCTCCCGCAAA 58.366 45.000 3.32 0.00 40.31 3.68
2909 5426 1.633774 TTTTAATTGGCCTCCCGCAA 58.366 45.000 3.32 0.00 40.31 4.85
2910 5427 1.633774 TTTTTAATTGGCCTCCCGCA 58.366 45.000 3.32 0.00 40.31 5.69
2911 5428 2.935849 CAATTTTTAATTGGCCTCCCGC 59.064 45.455 3.32 0.00 0.00 6.13
2912 5429 4.200838 ACAATTTTTAATTGGCCTCCCG 57.799 40.909 3.32 0.00 33.56 5.14
2913 5430 5.411361 GTGAACAATTTTTAATTGGCCTCCC 59.589 40.000 3.32 0.02 33.56 4.30
2914 5431 5.411361 GGTGAACAATTTTTAATTGGCCTCC 59.589 40.000 3.32 11.53 33.56 4.30
2915 5432 5.994668 TGGTGAACAATTTTTAATTGGCCTC 59.005 36.000 3.32 9.34 33.56 4.70
2916 5433 5.934781 TGGTGAACAATTTTTAATTGGCCT 58.065 33.333 3.32 0.00 33.56 5.19
2917 5434 6.429385 TCATGGTGAACAATTTTTAATTGGCC 59.571 34.615 14.55 0.00 33.56 5.36
2918 5435 7.432350 TCATGGTGAACAATTTTTAATTGGC 57.568 32.000 14.55 8.10 33.56 4.52
3063 5634 3.070878 ACATCCTGCCGTTTTTCCAATTT 59.929 39.130 0.00 0.00 0.00 1.82
3065 5636 2.029110 CACATCCTGCCGTTTTTCCAAT 60.029 45.455 0.00 0.00 0.00 3.16
3068 5639 1.243902 TCACATCCTGCCGTTTTTCC 58.756 50.000 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.