Multiple sequence alignment - TraesCS2D01G433400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G433400 chr2D 100.000 7651 0 0 1 7651 544895340 544902990 0.000000e+00 14129.0
1 TraesCS2D01G433400 chr2D 95.476 2100 85 6 1575 3668 86069497 86067402 0.000000e+00 3343.0
2 TraesCS2D01G433400 chr2D 94.092 2099 116 7 1577 3668 79278943 79276846 0.000000e+00 3182.0
3 TraesCS2D01G433400 chr2D 93.553 2094 124 8 1577 3668 170086078 170088162 0.000000e+00 3109.0
4 TraesCS2D01G433400 chr2D 93.381 2100 126 10 1575 3668 531262275 531260183 0.000000e+00 3096.0
5 TraesCS2D01G433400 chr2D 89.498 219 16 2 4181 4399 53949996 53949785 3.520000e-68 270.0
6 TraesCS2D01G433400 chr2D 88.811 143 3 3 5339 5475 558807232 558807097 6.140000e-36 163.0
7 TraesCS2D01G433400 chr5D 94.661 2079 96 7 1575 3642 374398100 374396026 0.000000e+00 3210.0
8 TraesCS2D01G433400 chr5D 93.991 2097 113 10 1577 3668 51856346 51854258 0.000000e+00 3162.0
9 TraesCS2D01G433400 chr5D 93.302 1060 48 13 4300 5350 553515183 553516228 0.000000e+00 1543.0
10 TraesCS2D01G433400 chr6D 93.944 2097 114 7 1577 3668 319522754 319524842 0.000000e+00 3157.0
11 TraesCS2D01G433400 chr6D 93.613 2098 122 9 1575 3668 290327583 290325494 0.000000e+00 3121.0
12 TraesCS2D01G433400 chr6D 93.540 1192 52 17 4300 5475 413351480 413350298 0.000000e+00 1751.0
13 TraesCS2D01G433400 chrUn 93.568 2099 126 7 1577 3668 96049724 96047628 0.000000e+00 3120.0
14 TraesCS2D01G433400 chrUn 93.690 1046 50 11 4333 5369 445260075 445259037 0.000000e+00 1552.0
15 TraesCS2D01G433400 chr2B 91.632 2175 115 38 5493 7648 651555636 651557762 0.000000e+00 2946.0
16 TraesCS2D01G433400 chr2B 87.035 779 61 20 659 1422 651553991 651554744 0.000000e+00 843.0
17 TraesCS2D01G433400 chr2B 90.095 525 24 10 3675 4175 651555021 651555541 0.000000e+00 656.0
18 TraesCS2D01G433400 chr2B 87.373 491 33 9 65 535 651553370 651553851 3.140000e-148 536.0
19 TraesCS2D01G433400 chr2B 90.909 110 7 2 1333 1442 651554745 651554851 2.230000e-30 145.0
20 TraesCS2D01G433400 chr3D 93.467 1194 50 18 4300 5477 613130390 613129209 0.000000e+00 1748.0
21 TraesCS2D01G433400 chr2A 91.298 1310 66 29 5481 6768 688586808 688585525 0.000000e+00 1744.0
22 TraesCS2D01G433400 chr2A 91.252 1166 64 24 4300 5446 652282387 652283533 0.000000e+00 1554.0
23 TraesCS2D01G433400 chr2A 91.096 730 42 11 657 1381 688589515 688588804 0.000000e+00 966.0
24 TraesCS2D01G433400 chr2A 83.768 499 32 14 60 537 688605793 688605323 1.970000e-115 427.0
25 TraesCS2D01G433400 chr2A 84.015 269 15 13 3854 4102 688587115 688586855 4.620000e-57 233.0
26 TraesCS2D01G433400 chr2A 84.264 197 20 7 3675 3870 688588655 688588469 1.700000e-41 182.0
27 TraesCS2D01G433400 chr7D 92.869 1192 51 20 4300 5474 117795304 117794130 0.000000e+00 1700.0
28 TraesCS2D01G433400 chr7D 90.821 207 18 1 4182 4388 39236693 39236898 7.560000e-70 276.0
29 TraesCS2D01G433400 chr7D 90.909 198 3 3 5286 5477 579320146 579320334 1.270000e-62 252.0
30 TraesCS2D01G433400 chr7D 80.269 223 31 6 5263 5478 580956263 580956479 1.030000e-33 156.0
31 TraesCS2D01G433400 chr6A 91.001 1189 83 15 4300 5474 598687371 598688549 0.000000e+00 1581.0
32 TraesCS2D01G433400 chr3A 90.194 1183 76 20 4302 5474 21160763 21161915 0.000000e+00 1506.0
33 TraesCS2D01G433400 chr3A 90.045 221 22 0 4180 4400 144302860 144302640 3.490000e-73 287.0
34 TraesCS2D01G433400 chr3A 89.593 221 23 0 4180 4400 498961167 498961387 1.630000e-71 281.0
35 TraesCS2D01G433400 chr3A 85.311 177 17 3 5308 5478 43338363 43338190 2.840000e-39 174.0
36 TraesCS2D01G433400 chr5A 92.243 1070 59 17 4300 5360 602533278 602534332 0.000000e+00 1495.0
37 TraesCS2D01G433400 chr3B 89.697 1155 74 22 4347 5474 252947934 252949070 0.000000e+00 1432.0
38 TraesCS2D01G433400 chr3B 87.150 1214 98 27 4300 5483 810496410 810495225 0.000000e+00 1325.0
39 TraesCS2D01G433400 chr3B 86.265 830 44 22 4672 5474 760118846 760119632 0.000000e+00 837.0
40 TraesCS2D01G433400 chr3B 84.404 109 9 6 5370 5478 828632505 828632605 4.890000e-17 100.0
41 TraesCS2D01G433400 chr4A 89.780 1047 72 17 4451 5475 715187604 715188637 0.000000e+00 1308.0
42 TraesCS2D01G433400 chr4A 88.995 209 23 0 4180 4388 367225307 367225515 7.620000e-65 259.0
43 TraesCS2D01G433400 chr6B 92.237 219 16 1 4182 4400 27972706 27972489 7.460000e-80 309.0
44 TraesCS2D01G433400 chr6B 92.188 192 15 0 4181 4372 184836736 184836545 9.780000e-69 272.0
45 TraesCS2D01G433400 chr6B 78.655 342 56 15 199 531 14539233 14538900 2.160000e-50 211.0
46 TraesCS2D01G433400 chr7B 90.826 218 19 1 4181 4398 618088979 618089195 2.700000e-74 291.0
47 TraesCS2D01G433400 chr7A 90.455 220 21 0 4181 4400 299400383 299400602 2.700000e-74 291.0
48 TraesCS2D01G433400 chr4D 76.875 320 49 17 212 518 11911212 11911519 2.860000e-34 158.0
49 TraesCS2D01G433400 chr1A 76.846 298 49 15 197 482 558310618 558310329 4.780000e-32 150.0
50 TraesCS2D01G433400 chr1B 80.198 202 31 6 197 395 642785060 642784865 8.000000e-30 143.0
51 TraesCS2D01G433400 chr1D 83.516 91 11 3 236 324 465969694 465969606 1.770000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G433400 chr2D 544895340 544902990 7650 False 14129.00 14129 100.00000 1 7651 1 chr2D.!!$F2 7650
1 TraesCS2D01G433400 chr2D 86067402 86069497 2095 True 3343.00 3343 95.47600 1575 3668 1 chr2D.!!$R3 2093
2 TraesCS2D01G433400 chr2D 79276846 79278943 2097 True 3182.00 3182 94.09200 1577 3668 1 chr2D.!!$R2 2091
3 TraesCS2D01G433400 chr2D 170086078 170088162 2084 False 3109.00 3109 93.55300 1577 3668 1 chr2D.!!$F1 2091
4 TraesCS2D01G433400 chr2D 531260183 531262275 2092 True 3096.00 3096 93.38100 1575 3668 1 chr2D.!!$R4 2093
5 TraesCS2D01G433400 chr5D 374396026 374398100 2074 True 3210.00 3210 94.66100 1575 3642 1 chr5D.!!$R2 2067
6 TraesCS2D01G433400 chr5D 51854258 51856346 2088 True 3162.00 3162 93.99100 1577 3668 1 chr5D.!!$R1 2091
7 TraesCS2D01G433400 chr5D 553515183 553516228 1045 False 1543.00 1543 93.30200 4300 5350 1 chr5D.!!$F1 1050
8 TraesCS2D01G433400 chr6D 319522754 319524842 2088 False 3157.00 3157 93.94400 1577 3668 1 chr6D.!!$F1 2091
9 TraesCS2D01G433400 chr6D 290325494 290327583 2089 True 3121.00 3121 93.61300 1575 3668 1 chr6D.!!$R1 2093
10 TraesCS2D01G433400 chr6D 413350298 413351480 1182 True 1751.00 1751 93.54000 4300 5475 1 chr6D.!!$R2 1175
11 TraesCS2D01G433400 chrUn 96047628 96049724 2096 True 3120.00 3120 93.56800 1577 3668 1 chrUn.!!$R1 2091
12 TraesCS2D01G433400 chrUn 445259037 445260075 1038 True 1552.00 1552 93.69000 4333 5369 1 chrUn.!!$R2 1036
13 TraesCS2D01G433400 chr2B 651553370 651557762 4392 False 1025.20 2946 89.40880 65 7648 5 chr2B.!!$F1 7583
14 TraesCS2D01G433400 chr3D 613129209 613130390 1181 True 1748.00 1748 93.46700 4300 5477 1 chr3D.!!$R1 1177
15 TraesCS2D01G433400 chr2A 652282387 652283533 1146 False 1554.00 1554 91.25200 4300 5446 1 chr2A.!!$F1 1146
16 TraesCS2D01G433400 chr2A 688585525 688589515 3990 True 781.25 1744 87.66825 657 6768 4 chr2A.!!$R2 6111
17 TraesCS2D01G433400 chr7D 117794130 117795304 1174 True 1700.00 1700 92.86900 4300 5474 1 chr7D.!!$R1 1174
18 TraesCS2D01G433400 chr6A 598687371 598688549 1178 False 1581.00 1581 91.00100 4300 5474 1 chr6A.!!$F1 1174
19 TraesCS2D01G433400 chr3A 21160763 21161915 1152 False 1506.00 1506 90.19400 4302 5474 1 chr3A.!!$F1 1172
20 TraesCS2D01G433400 chr5A 602533278 602534332 1054 False 1495.00 1495 92.24300 4300 5360 1 chr5A.!!$F1 1060
21 TraesCS2D01G433400 chr3B 252947934 252949070 1136 False 1432.00 1432 89.69700 4347 5474 1 chr3B.!!$F1 1127
22 TraesCS2D01G433400 chr3B 810495225 810496410 1185 True 1325.00 1325 87.15000 4300 5483 1 chr3B.!!$R1 1183
23 TraesCS2D01G433400 chr3B 760118846 760119632 786 False 837.00 837 86.26500 4672 5474 1 chr3B.!!$F2 802
24 TraesCS2D01G433400 chr4A 715187604 715188637 1033 False 1308.00 1308 89.78000 4451 5475 1 chr4A.!!$F2 1024

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
210 222 0.179045 GCTATGGCTTGGTCCACGAT 60.179 55.000 0.00 0.00 39.25 3.73 F
733 805 0.250124 AAACATCGGCGGAACAGTCA 60.250 50.000 7.21 0.00 0.00 3.41 F
1444 1613 0.380378 AACCACGTGACACATGTTGC 59.620 50.000 19.30 0.00 30.47 4.17 F
2850 3098 0.104671 TTGCCAAGCTTGTTGAAGGC 59.895 50.000 24.35 19.21 42.32 4.35 F
3233 3481 0.249398 GTTGATCACCAGCTACCGGT 59.751 55.000 13.98 13.98 37.16 5.28 F
4073 5740 0.107410 TTCGTCACCACAGGCTTTGT 60.107 50.000 0.00 0.00 41.94 2.83 F
4271 5946 0.368907 CATTAGTGCCGGTTCGAACG 59.631 55.000 21.34 15.88 0.00 3.95 F
4281 5956 1.014352 GGTTCGAACGGCTATGCATT 58.986 50.000 21.34 0.00 0.00 3.56 F
5128 6852 1.473434 CCGGCTGGGAAGTTAGATGAC 60.473 57.143 2.57 0.00 38.47 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1572 1806 0.249657 CGGCTGGAGATGCTCTTACC 60.250 60.000 0.00 0.00 0.00 2.85 R
2200 2445 1.028905 CGGTTCTTTGCTTTCACCCA 58.971 50.000 0.00 0.00 0.00 4.51 R
3294 3542 0.107361 CCACCAGATCATGCTGCAGA 60.107 55.000 20.43 6.38 34.56 4.26 R
3826 4087 0.034896 GGAGTCAAACTTCCAGCCGA 59.965 55.000 0.00 0.00 0.00 5.54 R
4252 5927 0.368907 CGTTCGAACCGGCACTAATG 59.631 55.000 22.07 0.54 0.00 1.90 R
5341 7098 0.601841 CACGAACCGCCACTAAAGGT 60.602 55.000 0.00 0.00 40.50 3.50 R
5762 7589 1.023513 GCCTGCAGACCAACTAGCAG 61.024 60.000 17.39 6.30 43.44 4.24 R
6020 7847 1.068748 GCCATGAACAGACAGCAAGTG 60.069 52.381 0.00 0.00 0.00 3.16 R
7067 8920 0.319555 ACACACACGAAGGATCACGG 60.320 55.000 10.02 3.46 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.512753 AAAACCCAATGAAAAACCAATGC 57.487 34.783 0.00 0.00 0.00 3.56
23 24 3.138884 ACCCAATGAAAAACCAATGCC 57.861 42.857 0.00 0.00 0.00 4.40
24 25 2.224744 ACCCAATGAAAAACCAATGCCC 60.225 45.455 0.00 0.00 0.00 5.36
25 26 2.040145 CCCAATGAAAAACCAATGCCCT 59.960 45.455 0.00 0.00 0.00 5.19
26 27 3.498301 CCCAATGAAAAACCAATGCCCTT 60.498 43.478 0.00 0.00 0.00 3.95
27 28 3.502979 CCAATGAAAAACCAATGCCCTTG 59.497 43.478 0.00 0.00 34.42 3.61
28 29 4.387598 CAATGAAAAACCAATGCCCTTGA 58.612 39.130 0.00 0.00 36.97 3.02
29 30 4.703379 ATGAAAAACCAATGCCCTTGAA 57.297 36.364 0.00 0.00 36.97 2.69
30 31 4.494091 TGAAAAACCAATGCCCTTGAAA 57.506 36.364 0.00 0.00 36.97 2.69
31 32 5.046288 TGAAAAACCAATGCCCTTGAAAT 57.954 34.783 0.00 0.00 36.97 2.17
32 33 5.062528 TGAAAAACCAATGCCCTTGAAATC 58.937 37.500 0.00 0.00 36.97 2.17
33 34 4.980339 AAAACCAATGCCCTTGAAATCT 57.020 36.364 0.00 0.00 36.97 2.40
34 35 6.042552 TGAAAAACCAATGCCCTTGAAATCTA 59.957 34.615 0.00 0.00 36.97 1.98
35 36 5.665916 AAACCAATGCCCTTGAAATCTAG 57.334 39.130 0.00 0.00 36.97 2.43
36 37 4.322057 ACCAATGCCCTTGAAATCTAGT 57.678 40.909 0.00 0.00 36.97 2.57
37 38 4.677182 ACCAATGCCCTTGAAATCTAGTT 58.323 39.130 0.00 0.00 36.97 2.24
38 39 5.826643 ACCAATGCCCTTGAAATCTAGTTA 58.173 37.500 0.00 0.00 36.97 2.24
39 40 5.888161 ACCAATGCCCTTGAAATCTAGTTAG 59.112 40.000 0.00 0.00 36.97 2.34
40 41 6.122277 CCAATGCCCTTGAAATCTAGTTAGA 58.878 40.000 0.00 0.00 36.97 2.10
41 42 6.038714 CCAATGCCCTTGAAATCTAGTTAGAC 59.961 42.308 0.00 0.00 36.97 2.59
42 43 6.567602 ATGCCCTTGAAATCTAGTTAGACT 57.432 37.500 0.00 0.00 34.72 3.24
43 44 7.676683 ATGCCCTTGAAATCTAGTTAGACTA 57.323 36.000 0.00 0.00 34.72 2.59
59 60 8.271312 AGTTAGACTAGATGTTCGGCTATATC 57.729 38.462 0.00 0.00 0.00 1.63
60 61 7.883833 AGTTAGACTAGATGTTCGGCTATATCA 59.116 37.037 0.00 0.00 0.00 2.15
61 62 8.512956 GTTAGACTAGATGTTCGGCTATATCAA 58.487 37.037 0.00 0.00 0.00 2.57
62 63 6.915349 AGACTAGATGTTCGGCTATATCAAC 58.085 40.000 0.00 0.00 0.00 3.18
63 64 6.026947 ACTAGATGTTCGGCTATATCAACC 57.973 41.667 0.00 0.00 0.00 3.77
87 88 3.213506 TGGTCCAGTTGTGTTGATCAAG 58.786 45.455 8.80 0.00 0.00 3.02
117 118 4.828409 CACTGAGTGGGGTGCAAT 57.172 55.556 4.28 0.00 0.00 3.56
118 119 2.260247 CACTGAGTGGGGTGCAATG 58.740 57.895 4.28 0.00 0.00 2.82
119 120 0.538057 CACTGAGTGGGGTGCAATGT 60.538 55.000 4.28 0.00 0.00 2.71
120 121 0.538057 ACTGAGTGGGGTGCAATGTG 60.538 55.000 0.00 0.00 0.00 3.21
121 122 0.538057 CTGAGTGGGGTGCAATGTGT 60.538 55.000 0.00 0.00 0.00 3.72
122 123 0.537143 TGAGTGGGGTGCAATGTGTC 60.537 55.000 0.00 0.00 0.00 3.67
160 172 1.191096 CACGCAACACAACAAGAAGC 58.809 50.000 0.00 0.00 0.00 3.86
166 178 1.029408 ACACAACAAGAAGCGTGGCA 61.029 50.000 0.00 0.00 33.62 4.92
208 220 0.676466 TTGCTATGGCTTGGTCCACG 60.676 55.000 1.68 0.00 39.25 4.94
210 222 0.179045 GCTATGGCTTGGTCCACGAT 60.179 55.000 0.00 0.00 39.25 3.73
272 284 0.804989 GTCGATTTGGTGGCTTCTGG 59.195 55.000 0.00 0.00 0.00 3.86
293 305 9.625747 TTCTGGATGAAGTATATGCATGTTTTA 57.374 29.630 10.16 0.00 0.00 1.52
325 337 9.425248 AATTGTTCCATTAGATGAACCATATGT 57.575 29.630 1.24 0.00 0.00 2.29
343 355 7.665559 ACCATATGTGTGTCTGTAGTTGAATTT 59.334 33.333 1.24 0.00 0.00 1.82
468 488 6.013984 TCAAATATAGGGGTTCGATTAGGTCC 60.014 42.308 0.00 0.00 0.00 4.46
476 496 3.550436 GGTTCGATTAGGTCCGATCACTC 60.550 52.174 8.45 0.06 34.58 3.51
478 498 4.347360 TCGATTAGGTCCGATCACTCTA 57.653 45.455 8.45 0.00 0.00 2.43
481 501 6.470278 TCGATTAGGTCCGATCACTCTATAA 58.530 40.000 8.45 0.00 0.00 0.98
487 508 9.803507 TTAGGTCCGATCACTCTATAATTTCTA 57.196 33.333 0.00 0.00 0.00 2.10
510 531 5.843019 ATTTTGAGGAGTTAAGGTCTGGA 57.157 39.130 0.00 0.00 0.00 3.86
512 533 3.827817 TGAGGAGTTAAGGTCTGGAGA 57.172 47.619 0.00 0.00 0.00 3.71
535 556 5.116084 AGCATTTGAGAAGTTATAGGGCA 57.884 39.130 0.00 0.00 0.00 5.36
536 557 5.699143 AGCATTTGAGAAGTTATAGGGCAT 58.301 37.500 0.00 0.00 0.00 4.40
537 558 5.533903 AGCATTTGAGAAGTTATAGGGCATG 59.466 40.000 0.00 0.00 0.00 4.06
538 559 5.300286 GCATTTGAGAAGTTATAGGGCATGT 59.700 40.000 0.00 0.00 0.00 3.21
539 560 6.514048 GCATTTGAGAAGTTATAGGGCATGTC 60.514 42.308 0.00 0.00 0.00 3.06
540 561 4.689612 TGAGAAGTTATAGGGCATGTCC 57.310 45.455 8.79 8.79 0.00 4.02
541 562 4.298626 TGAGAAGTTATAGGGCATGTCCT 58.701 43.478 24.92 24.92 40.79 3.85
542 563 4.721776 TGAGAAGTTATAGGGCATGTCCTT 59.278 41.667 26.87 14.72 38.30 3.36
543 564 5.903010 TGAGAAGTTATAGGGCATGTCCTTA 59.097 40.000 26.87 13.67 38.30 2.69
544 565 6.176014 AGAAGTTATAGGGCATGTCCTTAC 57.824 41.667 26.87 19.34 38.30 2.34
545 566 5.665812 AGAAGTTATAGGGCATGTCCTTACA 59.334 40.000 26.87 7.04 40.69 2.41
546 567 5.552870 AGTTATAGGGCATGTCCTTACAG 57.447 43.478 26.87 0.00 39.49 2.74
547 568 4.348168 AGTTATAGGGCATGTCCTTACAGG 59.652 45.833 26.87 0.00 39.49 4.00
548 569 1.507140 TAGGGCATGTCCTTACAGGG 58.493 55.000 26.87 0.00 39.49 4.45
550 571 3.813596 GCATGTCCTTACAGGGCG 58.186 61.111 0.00 0.00 44.85 6.13
551 572 1.220749 GCATGTCCTTACAGGGCGA 59.779 57.895 0.00 0.00 44.85 5.54
552 573 0.179045 GCATGTCCTTACAGGGCGAT 60.179 55.000 0.00 0.00 44.85 4.58
553 574 1.586422 CATGTCCTTACAGGGCGATG 58.414 55.000 0.00 0.00 44.85 3.84
554 575 0.469917 ATGTCCTTACAGGGCGATGG 59.530 55.000 0.00 0.00 44.85 3.51
555 576 0.907704 TGTCCTTACAGGGCGATGGT 60.908 55.000 0.00 0.00 44.85 3.55
556 577 1.117150 GTCCTTACAGGGCGATGGTA 58.883 55.000 0.00 0.00 35.59 3.25
557 578 1.692519 GTCCTTACAGGGCGATGGTAT 59.307 52.381 0.00 0.00 35.59 2.73
558 579 1.968493 TCCTTACAGGGCGATGGTATC 59.032 52.381 0.00 0.00 35.59 2.24
559 580 3.657476 TCCTTACAGGGCGATGGTATCG 61.657 54.545 6.83 6.83 44.29 2.92
590 611 6.144078 CCCCATAGGTATGTTTTAAGTTGC 57.856 41.667 0.00 0.00 31.82 4.17
603 624 5.499004 TTTAAGTTGCAGGTGAGGAGTAT 57.501 39.130 0.00 0.00 0.00 2.12
604 625 5.499004 TTAAGTTGCAGGTGAGGAGTATT 57.501 39.130 0.00 0.00 0.00 1.89
642 665 2.036992 AGAGAGTTGCAGTTGGAGTCTG 59.963 50.000 0.00 0.00 36.18 3.51
653 676 1.751927 GGAGTCTGGGCCATGCTTG 60.752 63.158 6.72 0.00 0.00 4.01
654 677 1.300963 GAGTCTGGGCCATGCTTGA 59.699 57.895 6.72 0.00 0.00 3.02
690 760 3.863407 CAAGACTACTCTTGGGGGC 57.137 57.895 4.65 0.00 46.87 5.80
726 798 2.754946 AAACTCTAAACATCGGCGGA 57.245 45.000 7.21 0.00 0.00 5.54
728 800 2.005971 ACTCTAAACATCGGCGGAAC 57.994 50.000 7.21 0.00 0.00 3.62
733 805 0.250124 AAACATCGGCGGAACAGTCA 60.250 50.000 7.21 0.00 0.00 3.41
749 821 4.096681 ACAGTCACTTGATCCTATCCACA 58.903 43.478 0.00 0.00 0.00 4.17
863 935 1.203287 GCAATCTTCTGGCTTTGGGTC 59.797 52.381 0.00 0.00 0.00 4.46
880 952 4.673298 CGTAGTGCCGCACCCACA 62.673 66.667 19.96 0.32 34.49 4.17
881 953 3.047877 GTAGTGCCGCACCCACAC 61.048 66.667 19.96 9.27 34.49 3.82
882 954 4.673298 TAGTGCCGCACCCACACG 62.673 66.667 19.96 0.00 39.31 4.49
955 1027 6.476896 CGCTTTCGTATATAGTAGGCTAGAC 58.523 44.000 0.00 0.00 0.00 2.59
964 1036 2.308690 AGTAGGCTAGACAATCGACCC 58.691 52.381 0.00 0.00 0.00 4.46
1047 1130 3.491652 GCCGCGGTTTCAGCTCTC 61.492 66.667 28.70 0.93 0.00 3.20
1074 1157 0.660595 CCGCTGTATTACTCGCCTCG 60.661 60.000 0.00 0.00 0.00 4.63
1276 1359 1.817447 ACTACCTCTGTAAGTCGCACC 59.183 52.381 0.00 0.00 33.76 5.01
1283 1366 1.205820 GTAAGTCGCACCCGCAAAC 59.794 57.895 0.00 0.00 38.40 2.93
1314 1397 0.947180 CCCTCCACGTTGGTTGTACG 60.947 60.000 0.00 0.00 44.20 3.67
1368 1451 1.065551 GCTCCACTTGTCGCAAAAAGT 59.934 47.619 0.00 0.00 37.09 2.66
1372 1455 5.334569 GCTCCACTTGTCGCAAAAAGTAATA 60.335 40.000 0.00 0.00 34.90 0.98
1442 1611 2.103432 TCCTAACCACGTGACACATGTT 59.897 45.455 19.30 13.57 30.47 2.71
1443 1612 2.223144 CCTAACCACGTGACACATGTTG 59.777 50.000 19.30 6.39 30.47 3.33
1444 1613 0.380378 AACCACGTGACACATGTTGC 59.620 50.000 19.30 0.00 30.47 4.17
1445 1614 1.082821 CCACGTGACACATGTTGCG 60.083 57.895 19.30 0.92 30.47 4.85
1446 1615 1.722163 CACGTGACACATGTTGCGC 60.722 57.895 10.90 0.00 30.47 6.09
1447 1616 2.176926 ACGTGACACATGTTGCGCA 61.177 52.632 5.66 5.66 28.11 6.09
1448 1617 1.010238 CGTGACACATGTTGCGCAA 60.010 52.632 21.02 21.02 0.00 4.85
1449 1618 0.590984 CGTGACACATGTTGCGCAAA 60.591 50.000 26.87 15.55 0.00 3.68
1450 1619 1.554392 GTGACACATGTTGCGCAAAA 58.446 45.000 26.87 21.87 0.00 2.44
1451 1620 1.923204 GTGACACATGTTGCGCAAAAA 59.077 42.857 26.87 16.97 0.00 1.94
1528 1762 9.833917 GCAGTAATCCTAAACCTAAATCTTACT 57.166 33.333 0.00 0.00 0.00 2.24
1541 1775 9.798994 ACCTAAATCTTACTGTGTATACTTTCG 57.201 33.333 4.17 0.00 0.00 3.46
1546 1780 6.849502 TCTTACTGTGTATACTTTCGTGAGG 58.150 40.000 4.17 0.00 0.00 3.86
1555 1789 2.213499 ACTTTCGTGAGGCTTTGTCAG 58.787 47.619 0.00 0.00 0.00 3.51
1563 1797 0.761187 AGGCTTTGTCAGTGCTCAGA 59.239 50.000 0.00 0.00 0.00 3.27
1806 2050 7.976175 GTCAGGTCAAAAGTCAAGATTTTCTTT 59.024 33.333 0.00 0.00 33.78 2.52
1811 2055 5.453567 AAAGTCAAGATTTTCTTTCCCGG 57.546 39.130 0.00 0.00 33.78 5.73
1861 2106 1.557099 CCACTAGCTATATCCCGGCA 58.443 55.000 0.00 0.00 0.00 5.69
1946 2191 3.655211 AGCCCCTCCAACAGCAGG 61.655 66.667 0.00 0.00 0.00 4.85
1957 2202 2.281761 CAGCAGGTGGGCGTTTCT 60.282 61.111 0.00 0.00 39.27 2.52
2291 2536 0.591170 CCACTTCACGGCGACAAAAT 59.409 50.000 16.62 0.00 0.00 1.82
2335 2580 0.610687 CCGAAAGCTCTTCCTCAGGT 59.389 55.000 0.00 0.00 0.00 4.00
2432 2677 0.681733 ATCCAGAAGTGCACGACAGT 59.318 50.000 12.01 0.00 0.00 3.55
2581 2826 1.202758 ACTTGAGAACACCCAATGCGA 60.203 47.619 0.00 0.00 0.00 5.10
2602 2847 2.145397 AGACACTGCTCGGATCCTAA 57.855 50.000 10.75 0.00 0.00 2.69
2615 2860 3.679917 CGGATCCTAACACAGAATGCAGT 60.680 47.826 10.75 0.00 42.53 4.40
2626 2871 6.006449 ACACAGAATGCAGTAAGAGGATTTT 58.994 36.000 0.00 0.00 42.53 1.82
2693 2938 2.586293 GCCCATTTGCTTGGCAGGT 61.586 57.895 0.00 0.00 44.70 4.00
2694 2939 1.257055 GCCCATTTGCTTGGCAGGTA 61.257 55.000 0.00 0.00 44.70 3.08
2824 3072 1.524621 AACGTGCTGCAGTGCTCTT 60.525 52.632 17.60 0.00 0.00 2.85
2850 3098 0.104671 TTGCCAAGCTTGTTGAAGGC 59.895 50.000 24.35 19.21 42.32 4.35
2911 3159 5.481473 CACTACAACAAGGGGTACTACCTAA 59.519 44.000 9.57 0.00 38.64 2.69
3114 3362 6.707608 CGAAAGATCAAATGTGGGAGATCATA 59.292 38.462 0.00 0.00 39.39 2.15
3233 3481 0.249398 GTTGATCACCAGCTACCGGT 59.751 55.000 13.98 13.98 37.16 5.28
3274 3522 1.337071 GTATGCGTCAGGAGATCCGAA 59.663 52.381 0.00 0.00 42.08 4.30
3294 3542 3.507675 CCCACAGGTGCATCATCAT 57.492 52.632 0.00 0.00 0.00 2.45
3534 3784 3.074412 CGAATATGGGCCTATTTTCGCT 58.926 45.455 30.70 1.80 35.73 4.93
3576 3827 1.480498 GGAAGGGGGCTGAAAAGTGAA 60.480 52.381 0.00 0.00 0.00 3.18
3577 3828 2.529632 GAAGGGGGCTGAAAAGTGAAT 58.470 47.619 0.00 0.00 0.00 2.57
3595 3846 1.768684 ATCAATATCGGCGCCTGGGT 61.769 55.000 26.68 8.85 0.00 4.51
3668 3925 1.226660 GGGGCGATTTTCATGCGTG 60.227 57.895 0.00 0.00 0.00 5.34
3669 3926 1.506262 GGGCGATTTTCATGCGTGT 59.494 52.632 5.68 0.00 0.00 4.49
3670 3927 0.798009 GGGCGATTTTCATGCGTGTG 60.798 55.000 5.68 0.00 0.00 3.82
3671 3928 1.405469 GGCGATTTTCATGCGTGTGC 61.405 55.000 5.68 2.19 43.20 4.57
3672 3929 0.454957 GCGATTTTCATGCGTGTGCT 60.455 50.000 5.68 0.00 43.34 4.40
3673 3930 1.527696 CGATTTTCATGCGTGTGCTC 58.472 50.000 5.68 0.00 43.34 4.26
3713 3974 2.296190 GCGGTTTCCTCTTTTCCACAAT 59.704 45.455 0.00 0.00 0.00 2.71
3740 4001 1.275505 CGTAGTGCTGTCATGCTCAG 58.724 55.000 11.58 11.58 36.18 3.35
3780 4041 5.321516 CAGTCGATTTGTTTCGGGATAAAC 58.678 41.667 0.00 0.00 39.56 2.01
3788 4049 0.391927 TTCGGGATAAACTGGTGGCG 60.392 55.000 0.00 0.00 0.00 5.69
3826 4087 3.130516 TGCGCAGTAGCAACTACTAGAAT 59.869 43.478 5.66 0.00 44.37 2.40
3847 4120 0.955919 GGCTGGAAGTTTGACTCCCG 60.956 60.000 0.00 0.00 35.30 5.14
3889 5531 0.460987 GCACGGTCCATCTCAAGGAG 60.461 60.000 0.00 0.00 35.42 3.69
3927 5586 2.868253 GGGTTCCCACCGAAATCAG 58.132 57.895 2.59 0.00 45.39 2.90
4007 5670 3.470567 CTGCACGAGTCCGAACGC 61.471 66.667 0.00 0.00 39.50 4.84
4024 5687 0.111089 CGCGTTGTCTCAAAGAGCAC 60.111 55.000 0.00 0.00 0.00 4.40
4041 5704 0.321387 CACCAGCTCATGACTGCACT 60.321 55.000 15.68 0.00 33.65 4.40
4073 5740 0.107410 TTCGTCACCACAGGCTTTGT 60.107 50.000 0.00 0.00 41.94 2.83
4074 5741 0.107410 TCGTCACCACAGGCTTTGTT 60.107 50.000 0.00 0.00 38.16 2.83
4113 5788 1.677576 CTTGTGCTCAGGCTTTTGACA 59.322 47.619 0.00 0.00 39.59 3.58
4135 5810 3.123050 GTTGTCACACAGAAAAATGCCC 58.877 45.455 0.00 0.00 0.00 5.36
4139 5814 0.749649 ACACAGAAAAATGCCCGCAA 59.250 45.000 0.00 0.00 0.00 4.85
4171 5846 8.535335 ACGGTGATATTTATCTTGCTGATCTAT 58.465 33.333 0.00 0.00 36.65 1.98
4183 5858 9.703892 ATCTTGCTGATCTATCACTTAATACAC 57.296 33.333 0.00 0.00 32.50 2.90
4184 5859 8.918116 TCTTGCTGATCTATCACTTAATACACT 58.082 33.333 0.00 0.00 32.50 3.55
4187 5862 9.355916 TGCTGATCTATCACTTAATACACTAGT 57.644 33.333 0.00 0.00 32.50 2.57
4205 5880 8.203681 ACACTAGTAGAAAAAGGACCTAATGT 57.796 34.615 3.59 0.00 0.00 2.71
4206 5881 8.095169 ACACTAGTAGAAAAAGGACCTAATGTG 58.905 37.037 3.59 0.00 0.00 3.21
4207 5882 8.311836 CACTAGTAGAAAAAGGACCTAATGTGA 58.688 37.037 3.59 0.00 0.00 3.58
4208 5883 8.532819 ACTAGTAGAAAAAGGACCTAATGTGAG 58.467 37.037 3.59 0.00 0.00 3.51
4209 5884 7.554959 AGTAGAAAAAGGACCTAATGTGAGA 57.445 36.000 0.00 0.00 0.00 3.27
4210 5885 7.387643 AGTAGAAAAAGGACCTAATGTGAGAC 58.612 38.462 0.00 0.00 0.00 3.36
4211 5886 6.187727 AGAAAAAGGACCTAATGTGAGACA 57.812 37.500 0.00 0.00 0.00 3.41
4212 5887 5.998363 AGAAAAAGGACCTAATGTGAGACAC 59.002 40.000 0.00 0.00 34.56 3.67
4223 5898 1.548719 TGTGAGACACATTAGTCCCGG 59.451 52.381 0.00 0.00 39.62 5.73
4224 5899 1.549170 GTGAGACACATTAGTCCCGGT 59.451 52.381 0.00 0.00 39.34 5.28
4225 5900 2.028385 GTGAGACACATTAGTCCCGGTT 60.028 50.000 0.00 0.00 39.34 4.44
4226 5901 2.635915 TGAGACACATTAGTCCCGGTTT 59.364 45.455 0.00 0.00 39.34 3.27
4227 5902 3.000727 GAGACACATTAGTCCCGGTTTG 58.999 50.000 0.00 0.00 39.34 2.93
4228 5903 2.635915 AGACACATTAGTCCCGGTTTGA 59.364 45.455 0.00 0.00 39.34 2.69
4229 5904 3.263425 AGACACATTAGTCCCGGTTTGAT 59.737 43.478 0.00 0.00 39.34 2.57
4230 5905 4.007659 GACACATTAGTCCCGGTTTGATT 58.992 43.478 0.00 0.00 32.36 2.57
4231 5906 4.403734 ACACATTAGTCCCGGTTTGATTT 58.596 39.130 0.00 0.00 0.00 2.17
4232 5907 4.830600 ACACATTAGTCCCGGTTTGATTTT 59.169 37.500 0.00 0.00 0.00 1.82
4233 5908 5.160641 CACATTAGTCCCGGTTTGATTTTG 58.839 41.667 0.00 0.00 0.00 2.44
4234 5909 4.219725 ACATTAGTCCCGGTTTGATTTTGG 59.780 41.667 0.00 0.00 0.00 3.28
4235 5910 2.375014 AGTCCCGGTTTGATTTTGGT 57.625 45.000 0.00 0.00 0.00 3.67
4236 5911 2.673258 AGTCCCGGTTTGATTTTGGTT 58.327 42.857 0.00 0.00 0.00 3.67
4237 5912 2.626266 AGTCCCGGTTTGATTTTGGTTC 59.374 45.455 0.00 0.00 0.00 3.62
4238 5913 1.609555 TCCCGGTTTGATTTTGGTTCG 59.390 47.619 0.00 0.00 0.00 3.95
4239 5914 1.336424 CCCGGTTTGATTTTGGTTCGG 60.336 52.381 0.00 0.00 36.43 4.30
4240 5915 1.338655 CCGGTTTGATTTTGGTTCGGT 59.661 47.619 0.00 0.00 0.00 4.69
4241 5916 2.553172 CCGGTTTGATTTTGGTTCGGTA 59.447 45.455 0.00 0.00 0.00 4.02
4242 5917 3.557508 CGGTTTGATTTTGGTTCGGTAC 58.442 45.455 0.00 0.00 0.00 3.34
4243 5918 3.251487 CGGTTTGATTTTGGTTCGGTACT 59.749 43.478 0.00 0.00 0.00 2.73
4244 5919 4.451774 CGGTTTGATTTTGGTTCGGTACTA 59.548 41.667 0.00 0.00 0.00 1.82
4245 5920 5.049543 CGGTTTGATTTTGGTTCGGTACTAA 60.050 40.000 0.00 0.00 0.00 2.24
4246 5921 6.348704 CGGTTTGATTTTGGTTCGGTACTAAT 60.349 38.462 0.00 0.00 0.00 1.73
4247 5922 6.804783 GGTTTGATTTTGGTTCGGTACTAATG 59.195 38.462 0.00 0.00 0.00 1.90
4248 5923 6.503589 TTGATTTTGGTTCGGTACTAATGG 57.496 37.500 0.00 0.00 0.00 3.16
4249 5924 5.562635 TGATTTTGGTTCGGTACTAATGGT 58.437 37.500 0.00 0.00 0.00 3.55
4250 5925 6.709281 TGATTTTGGTTCGGTACTAATGGTA 58.291 36.000 0.00 0.00 0.00 3.25
4251 5926 7.340256 TGATTTTGGTTCGGTACTAATGGTAT 58.660 34.615 0.00 0.00 32.56 2.73
4252 5927 7.496591 TGATTTTGGTTCGGTACTAATGGTATC 59.503 37.037 0.00 0.00 32.56 2.24
4253 5928 5.936187 TTGGTTCGGTACTAATGGTATCA 57.064 39.130 0.00 0.00 31.28 2.15
4254 5929 6.488769 TTGGTTCGGTACTAATGGTATCAT 57.511 37.500 0.00 0.00 31.28 2.45
4255 5930 6.488769 TGGTTCGGTACTAATGGTATCATT 57.511 37.500 6.44 6.44 44.87 2.57
4256 5931 7.600231 TGGTTCGGTACTAATGGTATCATTA 57.400 36.000 8.15 8.15 42.90 1.90
4264 5939 3.857157 AATGGTATCATTAGTGCCGGT 57.143 42.857 1.90 0.00 41.41 5.28
4265 5940 3.857157 ATGGTATCATTAGTGCCGGTT 57.143 42.857 1.90 0.00 0.00 4.44
4266 5941 3.188159 TGGTATCATTAGTGCCGGTTC 57.812 47.619 1.90 0.00 0.00 3.62
4267 5942 2.132762 GGTATCATTAGTGCCGGTTCG 58.867 52.381 1.90 0.00 0.00 3.95
4268 5943 2.223876 GGTATCATTAGTGCCGGTTCGA 60.224 50.000 1.90 0.00 0.00 3.71
4269 5944 2.684001 ATCATTAGTGCCGGTTCGAA 57.316 45.000 1.90 0.00 0.00 3.71
4270 5945 1.717194 TCATTAGTGCCGGTTCGAAC 58.283 50.000 20.14 20.14 0.00 3.95
4271 5946 0.368907 CATTAGTGCCGGTTCGAACG 59.631 55.000 21.34 15.88 0.00 3.95
4277 5952 3.700961 CCGGTTCGAACGGCTATG 58.299 61.111 25.58 11.66 45.34 2.23
4278 5953 2.522638 CCGGTTCGAACGGCTATGC 61.523 63.158 25.58 8.97 45.34 3.14
4279 5954 1.807981 CGGTTCGAACGGCTATGCA 60.808 57.895 21.34 0.00 0.00 3.96
4280 5955 1.151777 CGGTTCGAACGGCTATGCAT 61.152 55.000 21.34 3.79 0.00 3.96
4281 5956 1.014352 GGTTCGAACGGCTATGCATT 58.986 50.000 21.34 0.00 0.00 3.56
4282 5957 2.206750 GGTTCGAACGGCTATGCATTA 58.793 47.619 21.34 0.00 0.00 1.90
4283 5958 2.610374 GGTTCGAACGGCTATGCATTAA 59.390 45.455 21.34 0.00 0.00 1.40
4284 5959 3.250040 GGTTCGAACGGCTATGCATTAAT 59.750 43.478 21.34 0.00 0.00 1.40
4285 5960 4.211389 GTTCGAACGGCTATGCATTAATG 58.789 43.478 13.36 11.27 0.00 1.90
4297 5972 2.911819 CATTAATGCCGGTTCGTGTT 57.088 45.000 1.90 0.00 0.00 3.32
4298 5973 2.514902 CATTAATGCCGGTTCGTGTTG 58.485 47.619 1.90 0.00 0.00 3.33
4605 6294 5.940192 AACTTTTGCATACGATGTCAGAA 57.060 34.783 0.00 0.00 0.00 3.02
4888 6608 6.153680 TGGTCAAACTGTGGTCAAACTTATTT 59.846 34.615 0.00 0.00 0.00 1.40
4985 6708 3.065925 CCTAATGCTCAAGCTAAACTGCC 59.934 47.826 3.32 0.00 42.66 4.85
4989 6712 1.673033 GCTCAAGCTAAACTGCCGAGA 60.673 52.381 0.00 0.00 35.98 4.04
5128 6852 1.473434 CCGGCTGGGAAGTTAGATGAC 60.473 57.143 2.57 0.00 38.47 3.06
5145 6869 3.251479 TGACTTGGAATGAGTGATCCG 57.749 47.619 0.00 0.00 38.63 4.18
5400 7169 5.105269 GGACCCTTTAGTCTCCACTCTTTAG 60.105 48.000 0.00 0.00 36.95 1.85
5401 7170 5.404395 ACCCTTTAGTCTCCACTCTTTAGT 58.596 41.667 0.00 0.00 35.91 2.24
5402 7171 6.572703 GACCCTTTAGTCTCCACTCTTTAGTG 60.573 46.154 0.00 0.00 41.84 2.74
5403 7172 9.871070 GACCCTTTAGTCTCCACTCTTTAGTGC 62.871 48.148 0.00 0.00 41.39 4.40
5677 7490 2.132996 CGCTCCCTCCAGCTCATCT 61.133 63.158 0.00 0.00 37.25 2.90
5696 7523 2.834549 TCTCCCATGGTTCTTCAGTCTC 59.165 50.000 11.73 0.00 0.00 3.36
5697 7524 2.836981 CTCCCATGGTTCTTCAGTCTCT 59.163 50.000 11.73 0.00 0.00 3.10
5698 7525 3.251484 TCCCATGGTTCTTCAGTCTCTT 58.749 45.455 11.73 0.00 0.00 2.85
5699 7526 3.261897 TCCCATGGTTCTTCAGTCTCTTC 59.738 47.826 11.73 0.00 0.00 2.87
5701 7528 4.263243 CCCATGGTTCTTCAGTCTCTTCTT 60.263 45.833 11.73 0.00 0.00 2.52
5703 7530 5.512060 CCATGGTTCTTCAGTCTCTTCTTGA 60.512 44.000 2.57 0.00 0.00 3.02
5704 7531 4.950050 TGGTTCTTCAGTCTCTTCTTGAC 58.050 43.478 0.00 0.00 34.88 3.18
5705 7532 4.651503 TGGTTCTTCAGTCTCTTCTTGACT 59.348 41.667 0.00 0.00 44.62 3.41
5706 7533 5.221342 TGGTTCTTCAGTCTCTTCTTGACTC 60.221 44.000 0.00 0.00 42.21 3.36
5707 7534 5.221342 GGTTCTTCAGTCTCTTCTTGACTCA 60.221 44.000 0.00 0.00 42.21 3.41
5708 7535 6.454795 GTTCTTCAGTCTCTTCTTGACTCAT 58.545 40.000 0.00 0.00 42.21 2.90
5709 7536 7.309499 GGTTCTTCAGTCTCTTCTTGACTCATA 60.309 40.741 0.00 0.00 42.21 2.15
5710 7537 7.151999 TCTTCAGTCTCTTCTTGACTCATAC 57.848 40.000 0.00 0.00 42.21 2.39
5711 7538 6.717084 TCTTCAGTCTCTTCTTGACTCATACA 59.283 38.462 0.00 0.00 42.21 2.29
5712 7539 6.901081 TCAGTCTCTTCTTGACTCATACAA 57.099 37.500 0.00 0.00 42.21 2.41
5713 7540 6.682746 TCAGTCTCTTCTTGACTCATACAAC 58.317 40.000 0.00 0.00 42.21 3.32
5714 7541 6.491745 TCAGTCTCTTCTTGACTCATACAACT 59.508 38.462 0.00 0.00 42.21 3.16
5715 7542 7.014711 TCAGTCTCTTCTTGACTCATACAACTT 59.985 37.037 0.00 0.00 42.21 2.66
5716 7543 7.328249 CAGTCTCTTCTTGACTCATACAACTTC 59.672 40.741 0.00 0.00 42.21 3.01
5728 7555 8.405418 ACTCATACAACTTCAGTACTAGTCAA 57.595 34.615 0.00 0.00 0.00 3.18
5733 7560 6.636705 ACAACTTCAGTACTAGTCAACACAA 58.363 36.000 0.00 0.00 0.00 3.33
5743 7570 5.880901 ACTAGTCAACACAAAAGGGATGAT 58.119 37.500 0.00 0.00 0.00 2.45
5762 7589 6.183360 GGATGATCATCTACTGACCGATCTAC 60.183 46.154 29.85 8.32 36.48 2.59
5956 7783 3.694072 TGCTATTGTGGTACTGCAAATCC 59.306 43.478 6.71 0.00 0.00 3.01
5984 7811 3.489059 CCGCCAAATCGTAATGCTCAATT 60.489 43.478 0.00 0.00 0.00 2.32
5985 7812 3.725740 CGCCAAATCGTAATGCTCAATTC 59.274 43.478 0.00 0.00 0.00 2.17
5993 7820 8.506168 AATCGTAATGCTCAATTCCTTCTTTA 57.494 30.769 0.00 0.00 0.00 1.85
5994 7821 7.915293 TCGTAATGCTCAATTCCTTCTTTAA 57.085 32.000 0.00 0.00 0.00 1.52
5995 7822 8.506168 TCGTAATGCTCAATTCCTTCTTTAAT 57.494 30.769 0.00 0.00 0.00 1.40
5996 7823 8.956426 TCGTAATGCTCAATTCCTTCTTTAATT 58.044 29.630 0.00 0.00 0.00 1.40
6000 7827 6.996509 TGCTCAATTCCTTCTTTAATTTGCT 58.003 32.000 0.00 0.00 0.00 3.91
6006 7833 6.478512 TTCCTTCTTTAATTTGCTTGGTGT 57.521 33.333 0.00 0.00 0.00 4.16
6008 7835 7.589958 TCCTTCTTTAATTTGCTTGGTGTAA 57.410 32.000 0.00 0.00 0.00 2.41
6076 7907 2.568623 ACGATGGAGCCAAGAACTTT 57.431 45.000 0.00 0.00 0.00 2.66
6238 8069 1.302033 CTCCGTCTGCCACAAGCTT 60.302 57.895 0.00 0.00 44.23 3.74
6257 8088 4.749310 CGTCGCAGCTCAAGGGCT 62.749 66.667 0.00 0.00 44.10 5.19
6332 8163 4.849329 GCGGCTACGGTGAGTCGG 62.849 72.222 9.73 0.00 44.70 4.79
6350 8181 1.017387 GGTCGTTGAGCAATCCATCC 58.983 55.000 0.00 0.00 0.00 3.51
6351 8182 1.678728 GGTCGTTGAGCAATCCATCCA 60.679 52.381 0.00 0.00 0.00 3.41
6352 8183 2.292267 GTCGTTGAGCAATCCATCCAT 58.708 47.619 0.00 0.00 0.00 3.41
6353 8184 2.032550 GTCGTTGAGCAATCCATCCATG 59.967 50.000 0.00 0.00 0.00 3.66
6354 8185 1.268896 CGTTGAGCAATCCATCCATGC 60.269 52.381 0.00 0.00 40.34 4.06
6478 8320 0.441145 CCGCCTTACAACTACAACGC 59.559 55.000 0.00 0.00 0.00 4.84
6497 8339 1.446792 CAACGTGAGCTGCCTCGAT 60.447 57.895 15.66 5.10 41.13 3.59
6667 8511 3.243873 ACATGATGGATGCTACGTACCAG 60.244 47.826 0.00 0.00 35.15 4.00
6672 8516 2.947652 TGGATGCTACGTACCAGTAGAC 59.052 50.000 10.96 4.59 45.07 2.59
6677 8524 2.223135 GCTACGTACCAGTAGACCGAAC 60.223 54.545 10.96 0.00 45.07 3.95
6684 8531 1.067776 CCAGTAGACCGAACCAGACAC 60.068 57.143 0.00 0.00 0.00 3.67
6686 8533 1.612463 AGTAGACCGAACCAGACACAC 59.388 52.381 0.00 0.00 0.00 3.82
6687 8534 0.594602 TAGACCGAACCAGACACACG 59.405 55.000 0.00 0.00 0.00 4.49
6689 8536 2.279851 CCGAACCAGACACACGCA 60.280 61.111 0.00 0.00 0.00 5.24
6690 8537 2.310233 CCGAACCAGACACACGCAG 61.310 63.158 0.00 0.00 0.00 5.18
6691 8538 1.299850 CGAACCAGACACACGCAGA 60.300 57.895 0.00 0.00 0.00 4.26
6715 8562 2.096496 GCCGATTTGGTGATCTGAGTTG 59.904 50.000 0.00 0.00 41.21 3.16
6716 8563 3.599343 CCGATTTGGTGATCTGAGTTGA 58.401 45.455 0.00 0.00 0.00 3.18
6717 8564 3.620374 CCGATTTGGTGATCTGAGTTGAG 59.380 47.826 0.00 0.00 0.00 3.02
6725 8572 4.016444 GTGATCTGAGTTGAGAGGACTCT 58.984 47.826 0.60 0.60 43.07 3.24
6749 8602 2.098934 GTGTTGCATGTTGTGGTTGAGA 59.901 45.455 0.00 0.00 0.00 3.27
6828 8681 9.573133 ACGCATCCTTTAGATAAATTTGAAAAG 57.427 29.630 0.00 5.42 32.37 2.27
6839 8692 9.077885 AGATAAATTTGAAAAGTTCAGCCACTA 57.922 29.630 0.00 0.00 41.38 2.74
6850 8703 5.971763 AGTTCAGCCACTAGAAAGAGTATG 58.028 41.667 0.00 0.00 0.00 2.39
6856 8709 4.160626 GCCACTAGAAAGAGTATGGTGAGT 59.839 45.833 0.00 0.00 0.00 3.41
6881 8734 5.508200 TGTGCTTCCAACGAATTTTACTT 57.492 34.783 0.00 0.00 0.00 2.24
6886 8739 6.183360 TGCTTCCAACGAATTTTACTTTCACT 60.183 34.615 0.00 0.00 0.00 3.41
6892 8745 7.486551 CCAACGAATTTTACTTTCACTGTTTCA 59.513 33.333 0.00 0.00 0.00 2.69
7025 8878 4.163458 GGGGTTTTGTTTCTTTTTCCTCCT 59.837 41.667 0.00 0.00 0.00 3.69
7035 8888 7.445402 TGTTTCTTTTTCCTCCTTCTAGTCATG 59.555 37.037 0.00 0.00 0.00 3.07
7041 8894 6.874278 TTCCTCCTTCTAGTCATGAATTCA 57.126 37.500 11.26 11.26 0.00 2.57
7042 8895 7.443302 TTCCTCCTTCTAGTCATGAATTCAT 57.557 36.000 15.36 15.36 36.96 2.57
7067 8920 7.104326 TCTTTATGAATTTGCTTTTTGTCGC 57.896 32.000 0.00 0.00 0.00 5.19
7078 8931 1.153353 TTTTGTCGCCGTGATCCTTC 58.847 50.000 0.00 0.00 0.00 3.46
7079 8932 1.011968 TTTGTCGCCGTGATCCTTCG 61.012 55.000 0.00 0.00 0.00 3.79
7080 8933 2.149803 TTGTCGCCGTGATCCTTCGT 62.150 55.000 0.00 0.00 0.00 3.85
7081 8934 2.158959 GTCGCCGTGATCCTTCGTG 61.159 63.158 0.00 0.00 0.00 4.35
7082 8935 2.126071 CGCCGTGATCCTTCGTGT 60.126 61.111 0.00 0.00 0.00 4.49
7083 8936 2.444624 CGCCGTGATCCTTCGTGTG 61.445 63.158 0.00 0.00 0.00 3.82
7084 8937 1.374252 GCCGTGATCCTTCGTGTGT 60.374 57.895 0.00 0.00 0.00 3.72
7085 8938 1.626654 GCCGTGATCCTTCGTGTGTG 61.627 60.000 0.00 0.00 0.00 3.82
7086 8939 0.319555 CCGTGATCCTTCGTGTGTGT 60.320 55.000 0.00 0.00 0.00 3.72
7087 8940 1.068125 CCGTGATCCTTCGTGTGTGTA 60.068 52.381 0.00 0.00 0.00 2.90
7088 8941 1.983605 CGTGATCCTTCGTGTGTGTAC 59.016 52.381 0.00 0.00 0.00 2.90
7089 8942 1.983605 GTGATCCTTCGTGTGTGTACG 59.016 52.381 0.00 0.00 44.98 3.67
7136 8989 0.463654 ACGCAGAGGTTGAAAGTGCA 60.464 50.000 0.00 0.00 33.59 4.57
7158 9011 4.987408 TTCATTGTGCTTGTATCCCATG 57.013 40.909 0.00 0.00 0.00 3.66
7167 9020 4.881273 TGCTTGTATCCCATGATGTTACAC 59.119 41.667 0.00 0.00 32.18 2.90
7291 9144 9.589111 CTCTTTACTCCTATAAAAAGGTGAGTC 57.411 37.037 0.00 0.00 37.91 3.36
7355 9208 0.390209 GAAACACCCATGCATGTGCC 60.390 55.000 24.58 7.39 41.18 5.01
7432 9285 7.710896 AGCTAAAGATAAATCTGATGCCAAAC 58.289 34.615 0.00 0.00 37.19 2.93
7465 9318 5.869649 AGTAAGCAAAGGGAAAACATGTT 57.130 34.783 4.92 4.92 0.00 2.71
7478 9331 8.960591 AGGGAAAACATGTTAGAACTCATATTG 58.039 33.333 12.39 0.00 0.00 1.90
7485 9338 9.587772 ACATGTTAGAACTCATATTGTAGTGAC 57.412 33.333 0.00 0.00 0.00 3.67
7544 9398 1.813513 ACCGAGGAGAGCATTTGTTG 58.186 50.000 0.00 0.00 0.00 3.33
7553 9407 4.992951 GGAGAGCATTTGTTGAGCATTTTT 59.007 37.500 0.00 0.00 0.00 1.94
7557 9411 6.985645 AGAGCATTTGTTGAGCATTTTTGTTA 59.014 30.769 0.00 0.00 0.00 2.41
7565 9419 9.897744 TTGTTGAGCATTTTTGTTAAGATCTAG 57.102 29.630 0.00 0.00 0.00 2.43
7573 9427 9.309516 CATTTTTGTTAAGATCTAGCATGCAAT 57.690 29.630 21.98 10.24 0.00 3.56
7574 9428 9.880157 ATTTTTGTTAAGATCTAGCATGCAATT 57.120 25.926 21.98 1.04 0.00 2.32
7575 9429 9.709495 TTTTTGTTAAGATCTAGCATGCAATTT 57.291 25.926 21.98 0.61 0.00 1.82
7576 9430 9.709495 TTTTGTTAAGATCTAGCATGCAATTTT 57.291 25.926 21.98 13.34 0.00 1.82
7577 9431 9.709495 TTTGTTAAGATCTAGCATGCAATTTTT 57.291 25.926 21.98 9.26 0.00 1.94
7601 9455 2.494059 TCCGAAACTGAGGCAAAAGAG 58.506 47.619 0.00 0.00 0.00 2.85
7644 9498 9.847224 TTAAGGAGTGAAAAGAGTTTTACAGAT 57.153 29.630 0.00 0.00 36.06 2.90
7648 9502 8.596380 GGAGTGAAAAGAGTTTTACAGATATCG 58.404 37.037 0.00 0.00 36.06 2.92
7649 9503 7.965045 AGTGAAAAGAGTTTTACAGATATCGC 58.035 34.615 0.00 0.00 36.06 4.58
7650 9504 7.602644 AGTGAAAAGAGTTTTACAGATATCGCA 59.397 33.333 0.00 0.00 36.06 5.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.340666 GGCATTGGTTTTTCATTGGGTTTT 59.659 37.500 0.00 0.00 0.00 2.43
2 3 3.485394 GGCATTGGTTTTTCATTGGGTT 58.515 40.909 0.00 0.00 0.00 4.11
4 5 2.040145 AGGGCATTGGTTTTTCATTGGG 59.960 45.455 0.00 0.00 0.00 4.12
5 6 3.421919 AGGGCATTGGTTTTTCATTGG 57.578 42.857 0.00 0.00 0.00 3.16
6 7 4.387598 TCAAGGGCATTGGTTTTTCATTG 58.612 39.130 12.41 0.00 39.54 2.82
7 8 4.703379 TCAAGGGCATTGGTTTTTCATT 57.297 36.364 12.41 0.00 39.54 2.57
8 9 4.703379 TTCAAGGGCATTGGTTTTTCAT 57.297 36.364 12.41 0.00 39.54 2.57
9 10 4.494091 TTTCAAGGGCATTGGTTTTTCA 57.506 36.364 12.41 0.00 39.54 2.69
10 11 5.308014 AGATTTCAAGGGCATTGGTTTTTC 58.692 37.500 12.41 3.12 39.54 2.29
11 12 5.308976 AGATTTCAAGGGCATTGGTTTTT 57.691 34.783 12.41 0.00 39.54 1.94
12 13 4.980339 AGATTTCAAGGGCATTGGTTTT 57.020 36.364 12.41 0.00 39.54 2.43
13 14 5.086621 ACTAGATTTCAAGGGCATTGGTTT 58.913 37.500 12.41 0.00 39.54 3.27
14 15 4.677182 ACTAGATTTCAAGGGCATTGGTT 58.323 39.130 12.41 0.00 39.54 3.67
15 16 4.322057 ACTAGATTTCAAGGGCATTGGT 57.678 40.909 12.41 0.00 39.54 3.67
16 17 6.038714 GTCTAACTAGATTTCAAGGGCATTGG 59.961 42.308 12.41 0.00 35.71 3.16
17 18 6.825721 AGTCTAACTAGATTTCAAGGGCATTG 59.174 38.462 5.35 5.35 36.05 2.82
18 19 6.963322 AGTCTAACTAGATTTCAAGGGCATT 58.037 36.000 0.00 0.00 34.39 3.56
19 20 6.567602 AGTCTAACTAGATTTCAAGGGCAT 57.432 37.500 0.00 0.00 34.39 4.40
33 34 9.381033 GATATAGCCGAACATCTAGTCTAACTA 57.619 37.037 0.00 0.00 0.00 2.24
34 35 7.883833 TGATATAGCCGAACATCTAGTCTAACT 59.116 37.037 0.00 0.00 0.00 2.24
35 36 8.041829 TGATATAGCCGAACATCTAGTCTAAC 57.958 38.462 0.00 0.00 0.00 2.34
36 37 8.512956 GTTGATATAGCCGAACATCTAGTCTAA 58.487 37.037 0.00 0.00 0.00 2.10
37 38 7.120873 GGTTGATATAGCCGAACATCTAGTCTA 59.879 40.741 0.00 0.00 0.00 2.59
38 39 6.071840 GGTTGATATAGCCGAACATCTAGTCT 60.072 42.308 0.00 0.00 0.00 3.24
39 40 6.094061 GGTTGATATAGCCGAACATCTAGTC 58.906 44.000 0.00 0.00 0.00 2.59
40 41 6.026947 GGTTGATATAGCCGAACATCTAGT 57.973 41.667 0.00 0.00 0.00 2.57
51 52 2.301870 TGGACCATCGGTTGATATAGCC 59.698 50.000 0.00 0.00 35.25 3.93
52 53 3.006967 ACTGGACCATCGGTTGATATAGC 59.993 47.826 0.00 0.00 35.25 2.97
53 54 4.873746 ACTGGACCATCGGTTGATATAG 57.126 45.455 0.00 0.00 35.25 1.31
60 61 0.472471 ACACAACTGGACCATCGGTT 59.528 50.000 0.00 0.00 35.25 4.44
61 62 0.472471 AACACAACTGGACCATCGGT 59.528 50.000 0.00 0.00 39.44 4.69
62 63 0.874390 CAACACAACTGGACCATCGG 59.126 55.000 0.00 0.00 0.00 4.18
63 64 1.877637 TCAACACAACTGGACCATCG 58.122 50.000 0.00 0.00 0.00 3.84
64 65 3.411446 TGATCAACACAACTGGACCATC 58.589 45.455 0.00 0.00 0.00 3.51
65 66 3.507162 TGATCAACACAACTGGACCAT 57.493 42.857 0.00 0.00 0.00 3.55
66 67 3.213506 CTTGATCAACACAACTGGACCA 58.786 45.455 3.38 0.00 0.00 4.02
67 68 3.214328 ACTTGATCAACACAACTGGACC 58.786 45.455 3.38 0.00 0.00 4.46
87 88 0.304705 CTCAGTGGTGCAACGTTGAC 59.695 55.000 31.62 23.19 38.12 3.18
113 114 4.024218 GCTCTTGGATGATAGACACATTGC 60.024 45.833 0.00 0.00 0.00 3.56
115 116 5.627182 AGCTCTTGGATGATAGACACATT 57.373 39.130 0.00 0.00 0.00 2.71
117 118 6.777580 TGTATAGCTCTTGGATGATAGACACA 59.222 38.462 0.00 0.00 0.00 3.72
118 119 7.087639 GTGTATAGCTCTTGGATGATAGACAC 58.912 42.308 0.00 0.00 0.00 3.67
119 120 6.072452 CGTGTATAGCTCTTGGATGATAGACA 60.072 42.308 0.00 0.00 0.00 3.41
120 121 6.318628 CGTGTATAGCTCTTGGATGATAGAC 58.681 44.000 0.00 0.00 0.00 2.59
121 122 5.106118 GCGTGTATAGCTCTTGGATGATAGA 60.106 44.000 0.00 0.00 0.00 1.98
122 123 5.098893 GCGTGTATAGCTCTTGGATGATAG 58.901 45.833 0.00 0.00 0.00 2.08
166 178 2.278854 GTGCAACACAAATGGCTTGTT 58.721 42.857 0.00 0.00 46.49 2.83
195 207 4.345547 TGTATTATATCGTGGACCAAGCCA 59.654 41.667 2.02 0.00 35.02 4.75
236 248 6.658188 AATCGACCAAGTTTATCCCAAAAA 57.342 33.333 0.00 0.00 0.00 1.94
237 249 6.451393 CAAATCGACCAAGTTTATCCCAAAA 58.549 36.000 0.00 0.00 0.00 2.44
238 250 5.047660 CCAAATCGACCAAGTTTATCCCAAA 60.048 40.000 0.00 0.00 0.00 3.28
239 251 4.461081 CCAAATCGACCAAGTTTATCCCAA 59.539 41.667 0.00 0.00 0.00 4.12
240 252 4.013728 CCAAATCGACCAAGTTTATCCCA 58.986 43.478 0.00 0.00 0.00 4.37
241 253 4.014406 ACCAAATCGACCAAGTTTATCCC 58.986 43.478 0.00 0.00 0.00 3.85
242 254 4.142469 CCACCAAATCGACCAAGTTTATCC 60.142 45.833 0.00 0.00 0.00 2.59
243 255 4.674362 GCCACCAAATCGACCAAGTTTATC 60.674 45.833 0.00 0.00 0.00 1.75
244 256 3.192633 GCCACCAAATCGACCAAGTTTAT 59.807 43.478 0.00 0.00 0.00 1.40
245 257 2.554893 GCCACCAAATCGACCAAGTTTA 59.445 45.455 0.00 0.00 0.00 2.01
307 319 7.496920 ACAGACACACATATGGTTCATCTAATG 59.503 37.037 7.80 0.00 0.00 1.90
311 323 5.426689 ACAGACACACATATGGTTCATCT 57.573 39.130 7.80 0.69 0.00 2.90
325 337 6.201226 TGCAAAAATTCAACTACAGACACA 57.799 33.333 0.00 0.00 0.00 3.72
438 458 9.338622 CTAATCGAACCCCTATATTTGACTTTT 57.661 33.333 0.00 0.00 0.00 2.27
443 463 6.013984 GGACCTAATCGAACCCCTATATTTGA 60.014 42.308 0.00 0.00 0.00 2.69
459 479 9.575783 GAAATTATAGAGTGATCGGACCTAATC 57.424 37.037 0.00 0.00 0.00 1.75
487 508 6.044404 TCTCCAGACCTTAACTCCTCAAAATT 59.956 38.462 0.00 0.00 0.00 1.82
505 526 4.630644 ACTTCTCAAATGCTTCTCCAGA 57.369 40.909 0.00 0.00 0.00 3.86
507 528 7.050377 CCTATAACTTCTCAAATGCTTCTCCA 58.950 38.462 0.00 0.00 0.00 3.86
510 531 5.825151 GCCCTATAACTTCTCAAATGCTTCT 59.175 40.000 0.00 0.00 0.00 2.85
512 533 5.509498 TGCCCTATAACTTCTCAAATGCTT 58.491 37.500 0.00 0.00 0.00 3.91
540 561 2.065993 CGATACCATCGCCCTGTAAG 57.934 55.000 0.00 0.00 46.55 2.34
550 571 1.272769 GGGGTAGAGCACGATACCATC 59.727 57.143 3.97 0.00 42.78 3.51
551 572 1.339097 GGGGTAGAGCACGATACCAT 58.661 55.000 3.97 0.00 42.78 3.55
552 573 0.032912 TGGGGTAGAGCACGATACCA 60.033 55.000 3.97 0.00 42.78 3.25
553 574 1.339097 ATGGGGTAGAGCACGATACC 58.661 55.000 0.00 0.00 40.69 2.73
554 575 2.492484 CCTATGGGGTAGAGCACGATAC 59.508 54.545 0.00 0.00 31.71 2.24
555 576 2.803956 CCTATGGGGTAGAGCACGATA 58.196 52.381 0.00 0.00 31.71 2.92
556 577 1.633774 CCTATGGGGTAGAGCACGAT 58.366 55.000 0.00 0.00 31.71 3.73
557 578 3.127099 CCTATGGGGTAGAGCACGA 57.873 57.895 0.00 0.00 31.71 4.35
576 597 5.626142 TCCTCACCTGCAACTTAAAACATA 58.374 37.500 0.00 0.00 0.00 2.29
620 641 2.298729 AGACTCCAACTGCAACTCTCTC 59.701 50.000 0.00 0.00 0.00 3.20
622 643 2.411904 CAGACTCCAACTGCAACTCTC 58.588 52.381 0.00 0.00 0.00 3.20
642 665 3.439857 TTATAGGATCAAGCATGGCCC 57.560 47.619 0.00 0.00 0.00 5.80
675 743 1.411041 ATACGCCCCCAAGAGTAGTC 58.589 55.000 0.00 0.00 0.00 2.59
709 781 1.274167 TGTTCCGCCGATGTTTAGAGT 59.726 47.619 0.00 0.00 0.00 3.24
726 798 4.532126 TGTGGATAGGATCAAGTGACTGTT 59.468 41.667 0.00 0.00 0.00 3.16
728 800 4.691175 CTGTGGATAGGATCAAGTGACTG 58.309 47.826 0.00 0.00 0.00 3.51
733 805 2.158842 GCAGCTGTGGATAGGATCAAGT 60.159 50.000 16.64 0.00 0.00 3.16
749 821 3.886340 CGCATCAACTGAGCAGCT 58.114 55.556 0.00 0.00 0.00 4.24
863 935 4.673298 TGTGGGTGCGGCACTACG 62.673 66.667 29.92 0.00 34.40 3.51
880 952 3.891366 ACCTATTTATAGCCGTGGTACGT 59.109 43.478 0.00 0.00 40.58 3.57
881 953 4.232221 CACCTATTTATAGCCGTGGTACG 58.768 47.826 0.00 0.00 42.11 3.67
882 954 4.986659 CACACCTATTTATAGCCGTGGTAC 59.013 45.833 9.47 0.00 32.19 3.34
883 955 4.501915 GCACACCTATTTATAGCCGTGGTA 60.502 45.833 13.83 0.00 34.38 3.25
938 1010 7.012232 GGGTCGATTGTCTAGCCTACTATATAC 59.988 44.444 0.00 0.00 28.40 1.47
943 1015 3.117776 TGGGTCGATTGTCTAGCCTACTA 60.118 47.826 0.00 0.00 31.78 1.82
944 1016 2.308690 GGGTCGATTGTCTAGCCTACT 58.691 52.381 0.00 0.00 28.40 2.57
946 1018 2.447408 TGGGTCGATTGTCTAGCCTA 57.553 50.000 0.00 0.00 31.78 3.93
947 1019 1.794714 ATGGGTCGATTGTCTAGCCT 58.205 50.000 0.00 0.00 31.78 4.58
948 1020 2.622064 AATGGGTCGATTGTCTAGCC 57.378 50.000 0.00 0.00 31.23 3.93
950 1022 5.661458 ACAAGTAATGGGTCGATTGTCTAG 58.339 41.667 0.00 0.00 0.00 2.43
953 1025 4.859629 GACAAGTAATGGGTCGATTGTC 57.140 45.455 8.11 8.11 39.58 3.18
964 1036 0.729116 CCAGCCTGCGACAAGTAATG 59.271 55.000 0.00 0.00 0.00 1.90
1254 1337 2.089980 TGCGACTTACAGAGGTAGTCC 58.910 52.381 0.00 0.00 30.48 3.85
1292 1375 4.280019 AACCAACGTGGAGGGGGC 62.280 66.667 10.46 0.00 40.96 5.80
1293 1376 1.770749 TACAACCAACGTGGAGGGGG 61.771 60.000 10.46 3.17 40.96 5.40
1298 1381 0.876777 CAGCGTACAACCAACGTGGA 60.877 55.000 10.46 0.00 40.96 4.02
1314 1397 1.929836 CAACTCCGATACTTGAGCAGC 59.070 52.381 0.00 0.00 31.65 5.25
1383 1552 3.411446 TCTTACCATGGAGCTGTTGTTG 58.589 45.455 21.47 0.00 0.00 3.33
1385 1554 2.639839 ACTCTTACCATGGAGCTGTTGT 59.360 45.455 21.47 5.31 33.29 3.32
1390 1559 1.209019 CTGCACTCTTACCATGGAGCT 59.791 52.381 21.47 0.00 33.29 4.09
1397 1566 6.614694 TTTAGGATTACTGCACTCTTACCA 57.385 37.500 0.00 0.00 0.00 3.25
1460 1629 4.128925 AGATCGCTTACATGTGTGTCAT 57.871 40.909 9.11 0.00 39.77 3.06
1461 1630 3.592898 AGATCGCTTACATGTGTGTCA 57.407 42.857 9.11 0.00 39.77 3.58
1462 1631 5.577164 AGTTTAGATCGCTTACATGTGTGTC 59.423 40.000 9.11 0.73 39.77 3.67
1463 1632 5.479306 AGTTTAGATCGCTTACATGTGTGT 58.521 37.500 9.11 0.00 42.39 3.72
1464 1633 7.700322 ATAGTTTAGATCGCTTACATGTGTG 57.300 36.000 9.11 0.00 0.00 3.82
1465 1634 9.811995 TTAATAGTTTAGATCGCTTACATGTGT 57.188 29.630 9.11 0.00 0.00 3.72
1498 1667 7.988028 AGATTTAGGTTTAGGATTACTGCACTC 59.012 37.037 0.00 0.00 0.00 3.51
1541 1775 0.871057 GAGCACTGACAAAGCCTCAC 59.129 55.000 0.00 0.00 31.25 3.51
1546 1780 1.467734 CCATCTGAGCACTGACAAAGC 59.532 52.381 0.00 0.00 0.00 3.51
1563 1797 4.547367 GCTCTTACCGCCGCCCAT 62.547 66.667 0.00 0.00 0.00 4.00
1572 1806 0.249657 CGGCTGGAGATGCTCTTACC 60.250 60.000 0.00 0.00 0.00 2.85
1787 2031 5.691754 CCGGGAAAGAAAATCTTGACTTTTG 59.308 40.000 0.00 0.00 36.71 2.44
1927 2172 3.177884 TGCTGTTGGAGGGGCTGT 61.178 61.111 0.00 0.00 0.00 4.40
2077 2322 1.989620 CTTCCTCCTCCAGCAGCTT 59.010 57.895 0.00 0.00 0.00 3.74
2078 2323 2.668120 GCTTCCTCCTCCAGCAGCT 61.668 63.158 0.00 0.00 33.45 4.24
2200 2445 1.028905 CGGTTCTTTGCTTTCACCCA 58.971 50.000 0.00 0.00 0.00 4.51
2335 2580 4.387026 ACTCCCAGATGGAATTCACAAA 57.613 40.909 7.93 0.00 44.57 2.83
2432 2677 2.486918 CGTATGCAAGCATCCTCATCA 58.513 47.619 11.32 0.00 37.82 3.07
2581 2826 1.270907 AGGATCCGAGCAGTGTCTTT 58.729 50.000 5.98 0.00 0.00 2.52
2602 2847 4.833478 ATCCTCTTACTGCATTCTGTGT 57.167 40.909 0.00 0.00 0.00 3.72
2615 2860 5.195940 CAAGCATCCCAGAAAATCCTCTTA 58.804 41.667 0.00 0.00 0.00 2.10
2698 2943 2.356194 GCCTTTGGCGCCTTTGTG 60.356 61.111 29.70 13.30 39.62 3.33
2751 2996 2.092753 GGAGTGCCAAATCCAGAGATCA 60.093 50.000 0.00 0.00 35.54 2.92
2754 2999 1.661463 AGGAGTGCCAAATCCAGAGA 58.339 50.000 0.49 0.00 38.12 3.10
2824 3072 2.057137 ACAAGCTTGGCAAAGACAGA 57.943 45.000 29.18 0.00 35.19 3.41
2911 3159 2.881734 TCTCGGATAGATGCCATCAGT 58.118 47.619 7.56 0.00 0.00 3.41
3114 3362 2.033801 GTGCAAGATGACACAGCAAGTT 59.966 45.455 0.00 0.00 36.91 2.66
3233 3481 1.078159 TGAGGTAGGCAGTCCAGGTTA 59.922 52.381 0.00 0.00 33.74 2.85
3274 3522 0.405198 TGATGATGCACCTGTGGGTT 59.595 50.000 0.00 0.00 44.73 4.11
3294 3542 0.107361 CCACCAGATCATGCTGCAGA 60.107 55.000 20.43 6.38 34.56 4.26
3477 3727 1.135689 GCTCGGCGTTCAATTGTCAAT 60.136 47.619 6.85 0.00 0.00 2.57
3482 3732 1.154225 GTGGCTCGGCGTTCAATTG 60.154 57.895 6.85 0.00 0.00 2.32
3534 3784 3.674997 GGCGAATAAAGGGCTCATATGA 58.325 45.455 5.07 5.07 0.00 2.15
3576 3827 1.003355 CCCAGGCGCCGATATTGAT 60.003 57.895 23.20 0.00 0.00 2.57
3577 3828 2.425592 CCCAGGCGCCGATATTGA 59.574 61.111 23.20 0.00 0.00 2.57
3661 3918 1.004185 GCATCTTAGAGCACACGCATG 60.004 52.381 0.00 0.00 42.27 4.06
3668 3925 0.461961 AGGACGGCATCTTAGAGCAC 59.538 55.000 0.00 0.00 0.00 4.40
3669 3926 1.195115 AAGGACGGCATCTTAGAGCA 58.805 50.000 0.00 0.00 0.00 4.26
3670 3927 2.317530 AAAGGACGGCATCTTAGAGC 57.682 50.000 0.00 0.00 0.00 4.09
3671 3928 2.860735 CGAAAAGGACGGCATCTTAGAG 59.139 50.000 0.00 0.00 0.00 2.43
3672 3929 2.888594 CGAAAAGGACGGCATCTTAGA 58.111 47.619 0.00 0.00 0.00 2.10
3673 3930 1.327764 GCGAAAAGGACGGCATCTTAG 59.672 52.381 0.00 0.00 0.00 2.18
3740 4001 1.557443 CTGGCACGAACACGGAAGAC 61.557 60.000 0.00 0.00 0.00 3.01
3780 4041 0.249120 TCATACTTCCACGCCACCAG 59.751 55.000 0.00 0.00 0.00 4.00
3788 4049 3.194861 TGCGCACTAATCATACTTCCAC 58.805 45.455 5.66 0.00 0.00 4.02
3826 4087 0.034896 GGAGTCAAACTTCCAGCCGA 59.965 55.000 0.00 0.00 0.00 5.54
3847 4120 1.595382 ATGCGCGCTTGTCCTATCC 60.595 57.895 33.29 0.00 0.00 2.59
3927 5586 3.199508 AGCCATATGATATGAGCCAGGAC 59.800 47.826 13.79 0.00 0.00 3.85
4007 5670 1.528586 CTGGTGCTCTTTGAGACAACG 59.471 52.381 0.00 0.00 30.27 4.10
4024 5687 2.005451 GTAAGTGCAGTCATGAGCTGG 58.995 52.381 19.97 3.77 34.73 4.85
4031 5694 1.064003 TGGGGTGTAAGTGCAGTCAT 58.936 50.000 0.00 0.00 0.00 3.06
4113 5788 3.181476 GGGCATTTTTCTGTGTGACAACT 60.181 43.478 0.00 0.00 0.00 3.16
4135 5810 1.563111 ATATCACCGTTACCGTTGCG 58.437 50.000 0.00 0.00 0.00 4.85
4139 5814 5.464389 GCAAGATAAATATCACCGTTACCGT 59.536 40.000 3.45 0.00 35.17 4.83
4179 5854 9.317827 ACATTAGGTCCTTTTTCTACTAGTGTA 57.682 33.333 5.39 0.00 32.17 2.90
4180 5855 8.095169 CACATTAGGTCCTTTTTCTACTAGTGT 58.905 37.037 5.39 0.00 33.52 3.55
4181 5856 8.311836 TCACATTAGGTCCTTTTTCTACTAGTG 58.688 37.037 5.39 0.00 0.00 2.74
4182 5857 8.431910 TCACATTAGGTCCTTTTTCTACTAGT 57.568 34.615 0.00 0.00 0.00 2.57
4183 5858 8.750298 TCTCACATTAGGTCCTTTTTCTACTAG 58.250 37.037 0.00 0.00 0.00 2.57
4184 5859 8.529476 GTCTCACATTAGGTCCTTTTTCTACTA 58.471 37.037 0.00 0.00 0.00 1.82
4185 5860 7.016268 TGTCTCACATTAGGTCCTTTTTCTACT 59.984 37.037 0.00 0.00 0.00 2.57
4186 5861 7.117956 GTGTCTCACATTAGGTCCTTTTTCTAC 59.882 40.741 0.00 0.00 34.08 2.59
4187 5862 7.159372 GTGTCTCACATTAGGTCCTTTTTCTA 58.841 38.462 0.00 0.00 34.08 2.10
4188 5863 5.998363 GTGTCTCACATTAGGTCCTTTTTCT 59.002 40.000 0.00 0.00 34.08 2.52
4189 5864 5.763204 TGTGTCTCACATTAGGTCCTTTTTC 59.237 40.000 0.00 0.00 39.62 2.29
4190 5865 5.690865 TGTGTCTCACATTAGGTCCTTTTT 58.309 37.500 0.00 0.00 39.62 1.94
4191 5866 5.304686 TGTGTCTCACATTAGGTCCTTTT 57.695 39.130 0.00 0.00 39.62 2.27
4192 5867 4.974645 TGTGTCTCACATTAGGTCCTTT 57.025 40.909 0.00 0.00 39.62 3.11
4204 5879 1.549170 ACCGGGACTAATGTGTCTCAC 59.451 52.381 6.32 0.00 37.29 3.51
4205 5880 1.933021 ACCGGGACTAATGTGTCTCA 58.067 50.000 6.32 0.00 37.29 3.27
4206 5881 3.000727 CAAACCGGGACTAATGTGTCTC 58.999 50.000 6.32 0.00 37.16 3.36
4207 5882 2.635915 TCAAACCGGGACTAATGTGTCT 59.364 45.455 6.32 0.00 37.16 3.41
4208 5883 3.048337 TCAAACCGGGACTAATGTGTC 57.952 47.619 6.32 0.00 36.31 3.67
4209 5884 3.713826 ATCAAACCGGGACTAATGTGT 57.286 42.857 6.32 0.00 0.00 3.72
4210 5885 5.160641 CAAAATCAAACCGGGACTAATGTG 58.839 41.667 6.32 0.00 0.00 3.21
4211 5886 4.219725 CCAAAATCAAACCGGGACTAATGT 59.780 41.667 6.32 0.00 0.00 2.71
4212 5887 4.219725 ACCAAAATCAAACCGGGACTAATG 59.780 41.667 6.32 0.00 0.00 1.90
4213 5888 4.412843 ACCAAAATCAAACCGGGACTAAT 58.587 39.130 6.32 0.00 0.00 1.73
4214 5889 3.834938 ACCAAAATCAAACCGGGACTAA 58.165 40.909 6.32 0.00 0.00 2.24
4215 5890 3.512219 ACCAAAATCAAACCGGGACTA 57.488 42.857 6.32 0.00 0.00 2.59
4216 5891 2.375014 ACCAAAATCAAACCGGGACT 57.625 45.000 6.32 0.00 0.00 3.85
4217 5892 2.606065 CGAACCAAAATCAAACCGGGAC 60.606 50.000 6.32 0.00 0.00 4.46
4218 5893 1.609555 CGAACCAAAATCAAACCGGGA 59.390 47.619 6.32 0.00 0.00 5.14
4219 5894 1.336424 CCGAACCAAAATCAAACCGGG 60.336 52.381 6.32 0.00 32.84 5.73
4220 5895 1.338655 ACCGAACCAAAATCAAACCGG 59.661 47.619 0.00 0.00 41.24 5.28
4221 5896 2.785713 ACCGAACCAAAATCAAACCG 57.214 45.000 0.00 0.00 0.00 4.44
4222 5897 4.841443 AGTACCGAACCAAAATCAAACC 57.159 40.909 0.00 0.00 0.00 3.27
4223 5898 6.804783 CCATTAGTACCGAACCAAAATCAAAC 59.195 38.462 0.00 0.00 0.00 2.93
4224 5899 6.490721 ACCATTAGTACCGAACCAAAATCAAA 59.509 34.615 0.00 0.00 0.00 2.69
4225 5900 6.005198 ACCATTAGTACCGAACCAAAATCAA 58.995 36.000 0.00 0.00 0.00 2.57
4226 5901 5.562635 ACCATTAGTACCGAACCAAAATCA 58.437 37.500 0.00 0.00 0.00 2.57
4227 5902 7.496591 TGATACCATTAGTACCGAACCAAAATC 59.503 37.037 0.00 0.00 32.46 2.17
4228 5903 7.340256 TGATACCATTAGTACCGAACCAAAAT 58.660 34.615 0.00 0.00 32.46 1.82
4229 5904 6.709281 TGATACCATTAGTACCGAACCAAAA 58.291 36.000 0.00 0.00 32.46 2.44
4230 5905 6.297080 TGATACCATTAGTACCGAACCAAA 57.703 37.500 0.00 0.00 32.46 3.28
4231 5906 5.936187 TGATACCATTAGTACCGAACCAA 57.064 39.130 0.00 0.00 32.46 3.67
4232 5907 6.488769 AATGATACCATTAGTACCGAACCA 57.511 37.500 0.00 0.00 40.95 3.67
4243 5918 4.967084 ACCGGCACTAATGATACCATTA 57.033 40.909 0.00 0.00 42.56 1.90
4244 5919 3.857157 ACCGGCACTAATGATACCATT 57.143 42.857 0.00 0.00 44.56 3.16
4245 5920 3.740115 GAACCGGCACTAATGATACCAT 58.260 45.455 0.00 0.00 33.66 3.55
4246 5921 2.482316 CGAACCGGCACTAATGATACCA 60.482 50.000 0.00 0.00 0.00 3.25
4247 5922 2.132762 CGAACCGGCACTAATGATACC 58.867 52.381 0.00 0.00 0.00 2.73
4248 5923 3.088194 TCGAACCGGCACTAATGATAC 57.912 47.619 0.00 0.00 0.00 2.24
4249 5924 3.450578 GTTCGAACCGGCACTAATGATA 58.549 45.455 17.68 0.00 0.00 2.15
4250 5925 2.277084 GTTCGAACCGGCACTAATGAT 58.723 47.619 17.68 0.00 0.00 2.45
4251 5926 1.717194 GTTCGAACCGGCACTAATGA 58.283 50.000 17.68 0.00 0.00 2.57
4252 5927 0.368907 CGTTCGAACCGGCACTAATG 59.631 55.000 22.07 0.54 0.00 1.90
4253 5928 0.738412 CCGTTCGAACCGGCACTAAT 60.738 55.000 22.07 0.00 38.85 1.73
4254 5929 1.373246 CCGTTCGAACCGGCACTAA 60.373 57.895 22.07 0.00 38.85 2.24
4255 5930 2.259204 CCGTTCGAACCGGCACTA 59.741 61.111 22.07 0.00 38.85 2.74
4261 5936 1.151777 ATGCATAGCCGTTCGAACCG 61.152 55.000 22.07 16.66 0.00 4.44
4262 5937 1.014352 AATGCATAGCCGTTCGAACC 58.986 50.000 22.07 9.45 0.00 3.62
4263 5938 3.936902 TTAATGCATAGCCGTTCGAAC 57.063 42.857 18.47 18.47 0.00 3.95
4264 5939 4.466567 CATTAATGCATAGCCGTTCGAA 57.533 40.909 0.00 0.00 0.00 3.71
4278 5953 2.160615 TCAACACGAACCGGCATTAATG 59.839 45.455 11.27 11.27 0.00 1.90
4279 5954 2.428491 TCAACACGAACCGGCATTAAT 58.572 42.857 0.00 0.00 0.00 1.40
4280 5955 1.880271 TCAACACGAACCGGCATTAA 58.120 45.000 0.00 0.00 0.00 1.40
4281 5956 1.880271 TTCAACACGAACCGGCATTA 58.120 45.000 0.00 0.00 0.00 1.90
4282 5957 2.709170 TTCAACACGAACCGGCATT 58.291 47.368 0.00 0.00 0.00 3.56
4283 5958 4.466133 TTCAACACGAACCGGCAT 57.534 50.000 0.00 0.00 0.00 4.40
4290 5965 4.050553 CGGTACTAAAGGTTCAACACGAA 58.949 43.478 0.00 0.00 0.00 3.85
4291 5966 3.552684 CCGGTACTAAAGGTTCAACACGA 60.553 47.826 0.00 0.00 0.00 4.35
4292 5967 2.733026 CCGGTACTAAAGGTTCAACACG 59.267 50.000 0.00 0.00 0.00 4.49
4293 5968 3.732212 ACCGGTACTAAAGGTTCAACAC 58.268 45.455 4.49 0.00 33.96 3.32
4294 5969 4.420522 AACCGGTACTAAAGGTTCAACA 57.579 40.909 8.00 0.00 44.13 3.33
4295 5970 4.576053 ACAAACCGGTACTAAAGGTTCAAC 59.424 41.667 8.00 0.00 46.45 3.18
4296 5971 4.575645 CACAAACCGGTACTAAAGGTTCAA 59.424 41.667 8.00 0.00 46.45 2.69
4297 5972 4.128643 CACAAACCGGTACTAAAGGTTCA 58.871 43.478 8.00 0.00 46.45 3.18
4298 5973 3.058708 GCACAAACCGGTACTAAAGGTTC 60.059 47.826 8.00 0.00 46.45 3.62
4365 6040 2.419574 CCCTATAGTCCCGGTTTGTGTG 60.420 54.545 0.00 0.00 0.00 3.82
4985 6708 9.021863 GTAAGTTGTCAATCCTATTAACTCTCG 57.978 37.037 0.00 0.00 0.00 4.04
5016 6739 3.953612 TCTGCACTTGTTGTTTTCCTGAT 59.046 39.130 0.00 0.00 0.00 2.90
5043 6766 5.956563 TCGGAGTTCTATTCCCTCTACTTTT 59.043 40.000 0.00 0.00 0.00 2.27
5128 6852 1.667724 GTGCGGATCACTCATTCCAAG 59.332 52.381 0.00 0.00 42.38 3.61
5145 6869 5.047943 TCACTCCTCTTAACTACTCAAGTGC 60.048 44.000 0.00 0.00 38.88 4.40
5341 7098 0.601841 CACGAACCGCCACTAAAGGT 60.602 55.000 0.00 0.00 40.50 3.50
5378 7147 5.404395 ACTAAAGAGTGGAGACTAAAGGGT 58.596 41.667 0.00 0.00 33.41 4.34
5677 7490 2.907892 AGAGACTGAAGAACCATGGGA 58.092 47.619 18.09 0.00 0.00 4.37
5696 7523 8.085296 AGTACTGAAGTTGTATGAGTCAAGAAG 58.915 37.037 0.00 0.00 0.00 2.85
5697 7524 7.952671 AGTACTGAAGTTGTATGAGTCAAGAA 58.047 34.615 0.00 0.00 0.00 2.52
5698 7525 7.526142 AGTACTGAAGTTGTATGAGTCAAGA 57.474 36.000 0.00 0.00 0.00 3.02
5699 7526 8.516234 ACTAGTACTGAAGTTGTATGAGTCAAG 58.484 37.037 5.39 0.00 0.00 3.02
5701 7528 7.664318 TGACTAGTACTGAAGTTGTATGAGTCA 59.336 37.037 5.39 8.94 39.43 3.41
5703 7530 7.997773 TGACTAGTACTGAAGTTGTATGAGT 57.002 36.000 5.39 0.00 0.00 3.41
5704 7531 8.297426 TGTTGACTAGTACTGAAGTTGTATGAG 58.703 37.037 5.39 0.00 0.00 2.90
5705 7532 8.080417 GTGTTGACTAGTACTGAAGTTGTATGA 58.920 37.037 5.39 0.00 0.00 2.15
5706 7533 7.865889 TGTGTTGACTAGTACTGAAGTTGTATG 59.134 37.037 5.39 0.00 0.00 2.39
5707 7534 7.948357 TGTGTTGACTAGTACTGAAGTTGTAT 58.052 34.615 5.39 0.00 0.00 2.29
5708 7535 7.337480 TGTGTTGACTAGTACTGAAGTTGTA 57.663 36.000 5.39 0.00 0.00 2.41
5709 7536 6.216801 TGTGTTGACTAGTACTGAAGTTGT 57.783 37.500 5.39 0.00 0.00 3.32
5710 7537 7.534085 TTTGTGTTGACTAGTACTGAAGTTG 57.466 36.000 5.39 0.00 0.00 3.16
5711 7538 7.280205 CCTTTTGTGTTGACTAGTACTGAAGTT 59.720 37.037 5.39 0.00 0.00 2.66
5712 7539 6.761714 CCTTTTGTGTTGACTAGTACTGAAGT 59.238 38.462 5.39 1.12 0.00 3.01
5713 7540 6.202954 CCCTTTTGTGTTGACTAGTACTGAAG 59.797 42.308 5.39 0.00 0.00 3.02
5714 7541 6.053005 CCCTTTTGTGTTGACTAGTACTGAA 58.947 40.000 5.39 0.00 0.00 3.02
5715 7542 5.364446 TCCCTTTTGTGTTGACTAGTACTGA 59.636 40.000 5.39 0.00 0.00 3.41
5716 7543 5.607477 TCCCTTTTGTGTTGACTAGTACTG 58.393 41.667 5.39 0.00 0.00 2.74
5728 7555 6.070021 TCAGTAGATGATCATCCCTTTTGTGT 60.070 38.462 28.23 11.82 38.58 3.72
5733 7560 4.039730 CGGTCAGTAGATGATCATCCCTTT 59.960 45.833 28.23 14.80 39.18 3.11
5743 7570 3.815962 GCAGTAGATCGGTCAGTAGATGA 59.184 47.826 0.00 0.00 34.79 2.92
5762 7589 1.023513 GCCTGCAGACCAACTAGCAG 61.024 60.000 17.39 6.30 43.44 4.24
5823 7650 2.230025 CTGCCCTATGTCGATGAGGTAG 59.770 54.545 8.80 2.66 0.00 3.18
5956 7783 3.728718 GCATTACGATTTGGCGGTTAATG 59.271 43.478 0.00 0.00 35.29 1.90
5984 7811 7.589958 TTACACCAAGCAAATTAAAGAAGGA 57.410 32.000 0.00 0.00 0.00 3.36
5985 7812 8.547894 GTTTTACACCAAGCAAATTAAAGAAGG 58.452 33.333 0.00 0.00 0.00 3.46
6006 7833 4.957327 ACAGCAAGTGGTTTTAGGGTTTTA 59.043 37.500 0.00 0.00 0.00 1.52
6008 7835 3.371034 ACAGCAAGTGGTTTTAGGGTTT 58.629 40.909 0.00 0.00 0.00 3.27
6020 7847 1.068748 GCCATGAACAGACAGCAAGTG 60.069 52.381 0.00 0.00 0.00 3.16
6076 7907 4.358841 CCGGTGCCATGGACCCAA 62.359 66.667 18.40 0.00 0.00 4.12
6149 7980 1.583967 CGCTGTCGTCGAGATCACC 60.584 63.158 0.00 0.00 0.00 4.02
6150 7981 1.583967 CCGCTGTCGTCGAGATCAC 60.584 63.158 0.00 0.00 0.00 3.06
6151 7982 2.791927 CCGCTGTCGTCGAGATCA 59.208 61.111 0.00 0.00 0.00 2.92
6238 8069 2.571757 CCCTTGAGCTGCGACGTA 59.428 61.111 0.00 0.00 0.00 3.57
6332 8163 1.737838 TGGATGGATTGCTCAACGAC 58.262 50.000 0.00 0.00 0.00 4.34
6350 8181 1.741706 GTGTCTCCAGGTTGATGCATG 59.258 52.381 2.46 0.00 0.00 4.06
6351 8182 1.632409 AGTGTCTCCAGGTTGATGCAT 59.368 47.619 0.00 0.00 0.00 3.96
6352 8183 1.059098 AGTGTCTCCAGGTTGATGCA 58.941 50.000 0.00 0.00 0.00 3.96
6353 8184 1.446907 CAGTGTCTCCAGGTTGATGC 58.553 55.000 0.00 0.00 0.00 3.91
6354 8185 1.271001 TGCAGTGTCTCCAGGTTGATG 60.271 52.381 0.00 0.00 0.00 3.07
6478 8320 2.842394 ATCGAGGCAGCTCACGTTGG 62.842 60.000 0.00 0.00 0.00 3.77
6575 8417 3.583276 AATCTTGGCCGCGACGACA 62.583 57.895 8.23 0.00 0.00 4.35
6667 8511 1.665161 CGTGTGTCTGGTTCGGTCTAC 60.665 57.143 0.00 0.00 0.00 2.59
6672 8516 2.279851 TGCGTGTGTCTGGTTCGG 60.280 61.111 0.00 0.00 0.00 4.30
6677 8524 2.734723 CGGTCTGCGTGTGTCTGG 60.735 66.667 0.00 0.00 0.00 3.86
6687 8534 2.746277 ACCAAATCGGCGGTCTGC 60.746 61.111 7.21 0.00 45.38 4.26
6689 8536 0.462047 GATCACCAAATCGGCGGTCT 60.462 55.000 7.21 0.00 39.03 3.85
6690 8537 0.462047 AGATCACCAAATCGGCGGTC 60.462 55.000 7.21 0.00 39.03 4.79
6691 8538 0.744414 CAGATCACCAAATCGGCGGT 60.744 55.000 7.21 0.00 39.03 5.68
6708 8555 4.704540 ACACATAGAGTCCTCTCAACTCAG 59.295 45.833 0.00 0.00 44.54 3.35
6715 8562 3.876274 TGCAACACATAGAGTCCTCTC 57.124 47.619 0.00 0.00 40.93 3.20
6716 8563 3.517100 ACATGCAACACATAGAGTCCTCT 59.483 43.478 1.90 1.90 43.40 3.69
6717 8564 3.866651 ACATGCAACACATAGAGTCCTC 58.133 45.455 0.00 0.00 36.64 3.71
6725 8572 3.633986 TCAACCACAACATGCAACACATA 59.366 39.130 0.00 0.00 36.64 2.29
6828 8681 5.112686 CCATACTCTTTCTAGTGGCTGAAC 58.887 45.833 0.00 0.00 0.00 3.18
6839 8692 6.070538 AGCACAATACTCACCATACTCTTTCT 60.071 38.462 0.00 0.00 0.00 2.52
6850 8703 2.159627 CGTTGGAAGCACAATACTCACC 59.840 50.000 0.00 0.00 32.24 4.02
6856 8709 7.209471 AGTAAAATTCGTTGGAAGCACAATA 57.791 32.000 0.00 0.00 35.19 1.90
6881 8734 5.893687 TGTTACGAGTAGTGAAACAGTGAA 58.106 37.500 0.00 0.00 41.43 3.18
6886 8739 6.741109 TCATCTTGTTACGAGTAGTGAAACA 58.259 36.000 0.00 0.00 41.43 2.83
7042 8895 7.307101 GGCGACAAAAAGCAAATTCATAAAGAA 60.307 33.333 0.00 0.00 36.42 2.52
7067 8920 0.319555 ACACACACGAAGGATCACGG 60.320 55.000 10.02 3.46 0.00 4.94
7079 8932 3.554324 AGACAACATCAACGTACACACAC 59.446 43.478 0.00 0.00 0.00 3.82
7080 8933 3.787785 AGACAACATCAACGTACACACA 58.212 40.909 0.00 0.00 0.00 3.72
7081 8934 6.462073 AATAGACAACATCAACGTACACAC 57.538 37.500 0.00 0.00 0.00 3.82
7082 8935 6.565060 GCAAATAGACAACATCAACGTACACA 60.565 38.462 0.00 0.00 0.00 3.72
7083 8936 5.788531 GCAAATAGACAACATCAACGTACAC 59.211 40.000 0.00 0.00 0.00 2.90
7084 8937 5.467063 TGCAAATAGACAACATCAACGTACA 59.533 36.000 0.00 0.00 0.00 2.90
7085 8938 5.922546 TGCAAATAGACAACATCAACGTAC 58.077 37.500 0.00 0.00 0.00 3.67
7086 8939 6.183360 GGATGCAAATAGACAACATCAACGTA 60.183 38.462 0.00 0.00 39.08 3.57
7087 8940 5.391950 GGATGCAAATAGACAACATCAACGT 60.392 40.000 0.00 0.00 39.08 3.99
7088 8941 5.030295 GGATGCAAATAGACAACATCAACG 58.970 41.667 0.00 0.00 39.08 4.10
7089 8942 6.199937 AGGATGCAAATAGACAACATCAAC 57.800 37.500 0.00 0.00 39.08 3.18
7136 8989 5.202765 TCATGGGATACAAGCACAATGAAT 58.797 37.500 0.00 0.00 39.74 2.57
7284 9137 6.928520 AGATTTTCATTTTCATGGACTCACC 58.071 36.000 0.00 0.00 39.54 4.02
7335 9188 0.317799 GCACATGCATGGGTGTTTCA 59.682 50.000 28.90 0.00 41.59 2.69
7345 9198 1.206132 CATCAACCAAGGCACATGCAT 59.794 47.619 6.15 0.00 44.36 3.96
7349 9202 1.203038 TGTCCATCAACCAAGGCACAT 60.203 47.619 0.00 0.00 0.00 3.21
7355 9208 7.630242 AATATAGTTGTGTCCATCAACCAAG 57.370 36.000 5.38 0.00 44.02 3.61
7411 9264 6.438425 ACCTGTTTGGCATCAGATTTATCTTT 59.562 34.615 17.68 0.00 40.22 2.52
7413 9266 5.359009 CACCTGTTTGGCATCAGATTTATCT 59.641 40.000 17.68 0.00 40.22 1.98
7432 9285 3.189287 CCTTTGCTTACTAACTGCACCTG 59.811 47.826 0.00 0.00 36.37 4.00
7465 9318 9.457436 TGTACTGTCACTACAATATGAGTTCTA 57.543 33.333 0.00 0.00 34.49 2.10
7478 9331 7.223387 CCGGGTTTAAATATGTACTGTCACTAC 59.777 40.741 0.00 0.00 0.00 2.73
7480 9333 6.070653 TCCGGGTTTAAATATGTACTGTCACT 60.071 38.462 0.00 0.00 0.00 3.41
7485 9338 6.092533 ACGTTTCCGGGTTTAAATATGTACTG 59.907 38.462 0.00 0.00 38.78 2.74
7489 9342 5.106197 GGAACGTTTCCGGGTTTAAATATGT 60.106 40.000 0.46 0.00 40.59 2.29
7509 9362 6.652062 TCTCCTCGGTAACTTTTATTTGGAAC 59.348 38.462 0.00 0.00 0.00 3.62
7527 9381 1.396301 GCTCAACAAATGCTCTCCTCG 59.604 52.381 0.00 0.00 0.00 4.63
7544 9398 7.167136 GCATGCTAGATCTTAACAAAAATGCTC 59.833 37.037 11.37 0.00 34.25 4.26
7577 9431 4.158764 TCTTTTGCCTCAGTTTCGGAAAAA 59.841 37.500 4.46 0.00 35.85 1.94
7578 9432 3.697045 TCTTTTGCCTCAGTTTCGGAAAA 59.303 39.130 4.46 0.00 0.00 2.29
7579 9433 3.283751 TCTTTTGCCTCAGTTTCGGAAA 58.716 40.909 0.00 0.00 0.00 3.13
7580 9434 2.878406 CTCTTTTGCCTCAGTTTCGGAA 59.122 45.455 0.00 0.00 0.00 4.30
7581 9435 2.158813 ACTCTTTTGCCTCAGTTTCGGA 60.159 45.455 0.00 0.00 0.00 4.55
7582 9436 2.222027 ACTCTTTTGCCTCAGTTTCGG 58.778 47.619 0.00 0.00 0.00 4.30
7583 9437 3.971032 AACTCTTTTGCCTCAGTTTCG 57.029 42.857 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.