Multiple sequence alignment - TraesCS2D01G432400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G432400 chr2D 100.000 9442 0 0 1 9442 544647779 544657220 0.000000e+00 17437.0
1 TraesCS2D01G432400 chr2D 97.531 324 7 1 1 323 10711342 10711019 3.850000e-153 553.0
2 TraesCS2D01G432400 chr2A 97.663 7959 135 23 762 8695 686855808 686863740 0.000000e+00 13620.0
3 TraesCS2D01G432400 chr2A 90.135 446 22 8 310 744 686855323 686855757 2.300000e-155 560.0
4 TraesCS2D01G432400 chr2A 84.981 526 57 13 8918 9436 686863963 686864473 1.820000e-141 514.0
5 TraesCS2D01G432400 chr2A 91.304 115 6 2 8721 8833 686863736 686863848 4.570000e-33 154.0
6 TraesCS2D01G432400 chr2B 87.861 3361 290 62 3805 7117 650282365 650285655 0.000000e+00 3838.0
7 TraesCS2D01G432400 chr2B 92.201 1731 77 28 7122 8833 650285735 650287426 0.000000e+00 2396.0
8 TraesCS2D01G432400 chr2B 89.674 1685 137 19 2158 3813 650280539 650282215 0.000000e+00 2113.0
9 TraesCS2D01G432400 chr2B 90.727 798 37 17 320 1083 650278883 650279677 0.000000e+00 1029.0
10 TraesCS2D01G432400 chr2B 85.640 578 60 17 8870 9436 650287427 650287992 3.800000e-163 586.0
11 TraesCS2D01G432400 chr2B 93.146 321 21 1 1 321 598568895 598568576 3.990000e-128 470.0
12 TraesCS2D01G432400 chr2B 88.945 199 22 0 1734 1932 650280288 650280486 7.320000e-61 246.0
13 TraesCS2D01G432400 chr7D 85.217 575 78 3 3555 4122 62965476 62966050 1.370000e-162 584.0
14 TraesCS2D01G432400 chr7D 85.043 575 79 3 3555 4122 63010785 63011359 6.360000e-161 579.0
15 TraesCS2D01G432400 chr7D 98.457 324 4 1 1 323 56995890 56996213 3.830000e-158 569.0
16 TraesCS2D01G432400 chr7D 94.704 321 16 1 3 323 45584571 45584252 1.830000e-136 497.0
17 TraesCS2D01G432400 chr1A 84.459 592 82 4 3555 4139 255752796 255753384 8.220000e-160 575.0
18 TraesCS2D01G432400 chr4A 84.291 592 83 4 3555 4139 621920796 621921384 3.830000e-158 569.0
19 TraesCS2D01G432400 chr4A 85.714 224 28 3 2951 3174 524286524 524286743 5.700000e-57 233.0
20 TraesCS2D01G432400 chr3B 93.146 321 20 2 1 320 21744297 21744616 3.990000e-128 470.0
21 TraesCS2D01G432400 chr3B 91.718 326 24 3 1 324 60741158 60741482 5.200000e-122 449.0
22 TraesCS2D01G432400 chr3B 88.506 174 16 3 3113 3283 259415731 259415903 3.460000e-49 207.0
23 TraesCS2D01G432400 chr3B 87.013 77 10 0 2182 2258 815384457 815384533 4.700000e-13 87.9
24 TraesCS2D01G432400 chr4B 92.879 323 22 1 1 323 479411630 479411951 1.440000e-127 468.0
25 TraesCS2D01G432400 chr7A 91.277 321 27 1 1 321 671486485 671486804 4.050000e-118 436.0
26 TraesCS2D01G432400 chr5B 90.994 322 28 1 1 322 57944751 57945071 5.240000e-117 433.0
27 TraesCS2D01G432400 chr5B 86.937 222 26 2 2953 3174 18343905 18344123 7.320000e-61 246.0
28 TraesCS2D01G432400 chrUn 81.003 379 49 14 3362 3729 283637004 283637370 7.220000e-71 279.0
29 TraesCS2D01G432400 chrUn 81.003 379 49 14 3362 3729 284315953 284316319 7.220000e-71 279.0
30 TraesCS2D01G432400 chrUn 81.003 379 49 14 3362 3729 303576616 303576250 7.220000e-71 279.0
31 TraesCS2D01G432400 chrUn 81.003 379 49 14 3362 3729 305307279 305306913 7.220000e-71 279.0
32 TraesCS2D01G432400 chrUn 87.805 164 16 3 3122 3283 303576773 303576612 1.250000e-43 189.0
33 TraesCS2D01G432400 chrUn 87.805 164 16 3 3122 3283 305307436 305307275 1.250000e-43 189.0
34 TraesCS2D01G432400 chrUn 87.805 164 16 3 3122 3283 321020053 321020214 1.250000e-43 189.0
35 TraesCS2D01G432400 chrUn 87.805 164 16 3 3122 3283 337868240 337868079 1.250000e-43 189.0
36 TraesCS2D01G432400 chrUn 87.582 153 15 3 3133 3283 333504341 333504191 3.500000e-39 174.0
37 TraesCS2D01G432400 chr5D 87.387 222 25 2 2953 3174 26265239 26265457 1.570000e-62 252.0
38 TraesCS2D01G432400 chr3D 87.013 77 10 0 2182 2258 606372097 606372021 4.700000e-13 87.9
39 TraesCS2D01G432400 chr3A 87.013 77 10 0 2182 2258 737670741 737670817 4.700000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G432400 chr2D 544647779 544657220 9441 False 17437.000000 17437 100.000000 1 9442 1 chr2D.!!$F1 9441
1 TraesCS2D01G432400 chr2A 686855323 686864473 9150 False 3712.000000 13620 91.020750 310 9436 4 chr2A.!!$F1 9126
2 TraesCS2D01G432400 chr2B 650278883 650287992 9109 False 1701.333333 3838 89.174667 320 9436 6 chr2B.!!$F1 9116
3 TraesCS2D01G432400 chr7D 62965476 62966050 574 False 584.000000 584 85.217000 3555 4122 1 chr7D.!!$F2 567
4 TraesCS2D01G432400 chr7D 63010785 63011359 574 False 579.000000 579 85.043000 3555 4122 1 chr7D.!!$F3 567
5 TraesCS2D01G432400 chr1A 255752796 255753384 588 False 575.000000 575 84.459000 3555 4139 1 chr1A.!!$F1 584
6 TraesCS2D01G432400 chr4A 621920796 621921384 588 False 569.000000 569 84.291000 3555 4139 1 chr4A.!!$F2 584
7 TraesCS2D01G432400 chrUn 303576250 303576773 523 True 234.000000 279 84.404000 3122 3729 2 chrUn.!!$R3 607
8 TraesCS2D01G432400 chrUn 305306913 305307436 523 True 234.000000 279 84.404000 3122 3729 2 chrUn.!!$R4 607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
210 211 0.037975 GATTGCAGCCACAACAAGGG 60.038 55.000 0.00 0.00 31.03 3.95 F
749 765 0.104855 TCTCCGAATCAATGGGAGCG 59.895 55.000 1.47 0.00 45.57 5.03 F
750 766 0.104855 CTCCGAATCAATGGGAGCGA 59.895 55.000 0.00 0.00 40.76 4.93 F
759 775 0.107945 AATGGGAGCGAACTCTCTGC 60.108 55.000 0.00 0.00 44.49 4.26 F
1395 1544 0.435008 GCGCTAACACAGTTCAGTCG 59.565 55.000 0.00 0.00 0.00 4.18 F
1396 1545 1.060713 CGCTAACACAGTTCAGTCGG 58.939 55.000 0.00 0.00 0.00 4.79 F
2128 2285 2.893637 TGGCTCGAATTCAGCTCTTAC 58.106 47.619 21.34 10.66 37.05 2.34 F
2562 2734 3.131755 AGGAGCACGTTACCAGGTTATAC 59.868 47.826 0.00 0.00 0.00 1.47 F
2889 3061 6.040955 TCTCATAATGTGCCTCGAGTATTTCT 59.959 38.462 12.31 0.00 0.00 2.52 F
5596 5965 6.446318 TGCAATTAAGGTGTGAACAATCTTC 58.554 36.000 4.29 0.00 0.00 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2143 2301 0.323451 GAGGGCGGGATCTTTTGGTT 60.323 55.000 0.00 0.00 0.00 3.67 R
2562 2734 0.167470 CATGCTTTCCTCTGCACACG 59.833 55.000 0.00 0.00 42.26 4.49 R
2889 3061 7.870954 ACTTGTCAGATCTTGTAAACGTGATTA 59.129 33.333 0.00 0.00 0.00 1.75 R
3459 3641 8.192110 TGTTCCCACTTAGTGAAAATTTTACAC 58.808 33.333 14.66 18.14 35.23 2.90 R
3489 3674 1.486145 CCCCTACAACCGGGTCACTT 61.486 60.000 6.32 0.00 40.24 3.16 R
4446 4805 0.257328 TTTGTTGGAGGGTGAGCACA 59.743 50.000 2.75 0.00 0.00 4.57 R
4826 5186 3.368236 CAGGAAACGACTAGCAGCTTAAC 59.632 47.826 0.00 0.00 0.00 2.01 R
5636 6005 6.486253 TCAGATACTGAATTTGCAACTGAC 57.514 37.500 0.00 0.00 37.57 3.51 R
5755 6149 1.629043 TACTCTCGTGGGCACTTCTT 58.371 50.000 0.00 0.00 0.00 2.52 R
8672 9170 1.066143 ACCAGGCTACAACTCATTCCG 60.066 52.381 0.00 0.00 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.718940 CTGTTGAACATTTATGGGGGAC 57.281 45.455 0.00 0.00 0.00 4.46
37 38 3.277416 GGGACCTATAATCCTGGAGGT 57.723 52.381 1.52 3.14 45.13 3.85
38 39 2.907042 GGGACCTATAATCCTGGAGGTG 59.093 54.545 9.11 0.00 42.47 4.00
39 40 2.907042 GGACCTATAATCCTGGAGGTGG 59.093 54.545 9.11 6.00 42.47 4.61
40 41 3.439558 GGACCTATAATCCTGGAGGTGGA 60.440 52.174 9.11 0.00 42.47 4.02
41 42 3.579151 GACCTATAATCCTGGAGGTGGAC 59.421 52.174 9.11 1.22 42.47 4.02
42 43 3.210074 ACCTATAATCCTGGAGGTGGACT 59.790 47.826 1.52 0.00 40.86 3.85
43 44 3.580458 CCTATAATCCTGGAGGTGGACTG 59.420 52.174 1.52 0.00 36.30 3.51
44 45 1.204146 TAATCCTGGAGGTGGACTGC 58.796 55.000 1.52 0.00 36.30 4.40
45 46 1.903877 AATCCTGGAGGTGGACTGCG 61.904 60.000 1.52 0.00 41.01 5.18
46 47 4.767255 CCTGGAGGTGGACTGCGC 62.767 72.222 0.00 0.00 41.01 6.09
47 48 3.699894 CTGGAGGTGGACTGCGCT 61.700 66.667 9.73 0.00 41.01 5.92
48 49 3.947132 CTGGAGGTGGACTGCGCTG 62.947 68.421 13.23 13.23 41.01 5.18
50 51 4.687215 GAGGTGGACTGCGCTGCA 62.687 66.667 14.80 0.00 36.92 4.41
63 64 4.335647 CTGCAGTGGGCCGGAACT 62.336 66.667 5.05 1.52 43.89 3.01
64 65 3.850098 CTGCAGTGGGCCGGAACTT 62.850 63.158 5.05 0.00 43.89 2.66
65 66 3.365265 GCAGTGGGCCGGAACTTG 61.365 66.667 5.05 1.14 36.11 3.16
66 67 2.429930 CAGTGGGCCGGAACTTGA 59.570 61.111 5.05 0.00 0.00 3.02
67 68 1.002134 CAGTGGGCCGGAACTTGAT 60.002 57.895 5.05 0.00 0.00 2.57
68 69 1.026718 CAGTGGGCCGGAACTTGATC 61.027 60.000 5.05 0.00 0.00 2.92
69 70 1.201429 AGTGGGCCGGAACTTGATCT 61.201 55.000 5.05 0.00 0.00 2.75
70 71 0.744771 GTGGGCCGGAACTTGATCTC 60.745 60.000 5.05 0.00 0.00 2.75
71 72 1.521681 GGGCCGGAACTTGATCTCG 60.522 63.158 5.05 0.00 0.00 4.04
72 73 1.521681 GGCCGGAACTTGATCTCGG 60.522 63.158 5.05 0.00 43.13 4.63
73 74 1.515954 GCCGGAACTTGATCTCGGA 59.484 57.895 5.05 0.00 42.94 4.55
74 75 0.528684 GCCGGAACTTGATCTCGGAG 60.529 60.000 5.05 0.00 42.94 4.63
75 76 0.103208 CCGGAACTTGATCTCGGAGG 59.897 60.000 4.96 0.00 42.94 4.30
76 77 1.103803 CGGAACTTGATCTCGGAGGA 58.896 55.000 4.96 0.00 0.00 3.71
77 78 1.202313 CGGAACTTGATCTCGGAGGAC 60.202 57.143 4.96 0.61 0.00 3.85
78 79 1.137282 GGAACTTGATCTCGGAGGACC 59.863 57.143 4.96 0.00 0.00 4.46
79 80 1.137282 GAACTTGATCTCGGAGGACCC 59.863 57.143 4.96 0.00 0.00 4.46
80 81 0.688087 ACTTGATCTCGGAGGACCCC 60.688 60.000 4.96 0.00 0.00 4.95
81 82 0.397816 CTTGATCTCGGAGGACCCCT 60.398 60.000 4.96 0.00 36.03 4.79
82 83 0.687757 TTGATCTCGGAGGACCCCTG 60.688 60.000 4.96 0.00 31.76 4.45
83 84 2.444895 ATCTCGGAGGACCCCTGC 60.445 66.667 4.96 0.00 38.66 4.85
84 85 3.317436 ATCTCGGAGGACCCCTGCA 62.317 63.158 4.96 0.00 42.30 4.41
85 86 2.822643 ATCTCGGAGGACCCCTGCAA 62.823 60.000 4.96 0.00 42.30 4.08
86 87 3.003173 TCGGAGGACCCCTGCAAG 61.003 66.667 5.40 0.00 42.30 4.01
87 88 3.322466 CGGAGGACCCCTGCAAGT 61.322 66.667 5.40 0.00 42.30 3.16
88 89 2.671682 GGAGGACCCCTGCAAGTC 59.328 66.667 0.00 3.22 41.77 3.01
89 90 2.266055 GAGGACCCCTGCAAGTCG 59.734 66.667 5.41 0.00 31.76 4.18
90 91 2.526873 AGGACCCCTGCAAGTCGT 60.527 61.111 5.41 3.58 33.66 4.34
91 92 2.047179 GGACCCCTGCAAGTCGTC 60.047 66.667 5.41 0.95 33.66 4.20
92 93 2.584391 GGACCCCTGCAAGTCGTCT 61.584 63.158 5.41 0.00 32.44 4.18
93 94 1.255667 GGACCCCTGCAAGTCGTCTA 61.256 60.000 5.41 0.00 32.44 2.59
94 95 0.173708 GACCCCTGCAAGTCGTCTAG 59.826 60.000 0.00 0.00 30.04 2.43
95 96 1.153549 CCCCTGCAAGTCGTCTAGC 60.154 63.158 0.00 0.00 0.00 3.42
96 97 1.608717 CCCCTGCAAGTCGTCTAGCT 61.609 60.000 0.00 0.00 0.00 3.32
97 98 1.103803 CCCTGCAAGTCGTCTAGCTA 58.896 55.000 0.00 0.00 0.00 3.32
98 99 1.683917 CCCTGCAAGTCGTCTAGCTAT 59.316 52.381 0.00 0.00 0.00 2.97
99 100 2.544694 CCCTGCAAGTCGTCTAGCTATG 60.545 54.545 0.00 0.00 0.00 2.23
100 101 2.123342 CTGCAAGTCGTCTAGCTATGC 58.877 52.381 6.33 6.33 0.00 3.14
101 102 1.476488 TGCAAGTCGTCTAGCTATGCA 59.524 47.619 10.99 10.99 39.73 3.96
102 103 2.094234 TGCAAGTCGTCTAGCTATGCAA 60.094 45.455 12.31 0.00 39.15 4.08
103 104 3.126831 GCAAGTCGTCTAGCTATGCAAT 58.873 45.455 8.08 0.00 32.80 3.56
104 105 3.183373 GCAAGTCGTCTAGCTATGCAATC 59.817 47.826 8.08 0.00 32.80 2.67
105 106 4.363138 CAAGTCGTCTAGCTATGCAATCA 58.637 43.478 0.00 0.00 0.00 2.57
106 107 4.862902 AGTCGTCTAGCTATGCAATCAT 57.137 40.909 0.00 0.00 36.73 2.45
107 108 5.966742 AGTCGTCTAGCTATGCAATCATA 57.033 39.130 0.00 0.00 34.22 2.15
120 121 8.543862 CTATGCAATCATAGCTGACATAAAGA 57.456 34.615 0.00 0.00 43.83 2.52
121 122 7.812690 ATGCAATCATAGCTGACATAAAGAA 57.187 32.000 0.00 0.00 33.22 2.52
122 123 7.628769 TGCAATCATAGCTGACATAAAGAAA 57.371 32.000 0.00 0.00 33.22 2.52
123 124 8.054152 TGCAATCATAGCTGACATAAAGAAAA 57.946 30.769 0.00 0.00 33.22 2.29
124 125 7.970061 TGCAATCATAGCTGACATAAAGAAAAC 59.030 33.333 0.00 0.00 33.22 2.43
125 126 7.433425 GCAATCATAGCTGACATAAAGAAAACC 59.567 37.037 0.00 0.00 33.22 3.27
126 127 8.680903 CAATCATAGCTGACATAAAGAAAACCT 58.319 33.333 0.00 0.00 33.22 3.50
127 128 7.849804 TCATAGCTGACATAAAGAAAACCTC 57.150 36.000 0.00 0.00 0.00 3.85
128 129 7.394016 TCATAGCTGACATAAAGAAAACCTCA 58.606 34.615 0.00 0.00 0.00 3.86
129 130 7.882791 TCATAGCTGACATAAAGAAAACCTCAA 59.117 33.333 0.00 0.00 0.00 3.02
130 131 6.959639 AGCTGACATAAAGAAAACCTCAAA 57.040 33.333 0.00 0.00 0.00 2.69
131 132 7.530426 AGCTGACATAAAGAAAACCTCAAAT 57.470 32.000 0.00 0.00 0.00 2.32
132 133 7.373493 AGCTGACATAAAGAAAACCTCAAATG 58.627 34.615 0.00 0.00 0.00 2.32
133 134 6.089954 GCTGACATAAAGAAAACCTCAAATGC 59.910 38.462 0.00 0.00 0.00 3.56
134 135 6.454795 TGACATAAAGAAAACCTCAAATGCC 58.545 36.000 0.00 0.00 0.00 4.40
135 136 6.267471 TGACATAAAGAAAACCTCAAATGCCT 59.733 34.615 0.00 0.00 0.00 4.75
136 137 7.066307 ACATAAAGAAAACCTCAAATGCCTT 57.934 32.000 0.00 0.00 0.00 4.35
137 138 7.154656 ACATAAAGAAAACCTCAAATGCCTTC 58.845 34.615 0.00 0.00 0.00 3.46
138 139 4.607293 AAGAAAACCTCAAATGCCTTCC 57.393 40.909 0.00 0.00 0.00 3.46
139 140 3.575805 AGAAAACCTCAAATGCCTTCCA 58.424 40.909 0.00 0.00 0.00 3.53
140 141 3.966665 AGAAAACCTCAAATGCCTTCCAA 59.033 39.130 0.00 0.00 0.00 3.53
141 142 4.408596 AGAAAACCTCAAATGCCTTCCAAA 59.591 37.500 0.00 0.00 0.00 3.28
142 143 4.341366 AAACCTCAAATGCCTTCCAAAG 57.659 40.909 0.00 0.00 0.00 2.77
153 154 2.944129 CCTTCCAAAGGTTTGAGGTCA 58.056 47.619 3.95 0.00 43.95 4.02
154 155 2.887152 CCTTCCAAAGGTTTGAGGTCAG 59.113 50.000 3.95 0.00 43.95 3.51
155 156 2.656947 TCCAAAGGTTTGAGGTCAGG 57.343 50.000 3.95 0.00 40.55 3.86
156 157 1.144913 TCCAAAGGTTTGAGGTCAGGG 59.855 52.381 3.95 0.00 40.55 4.45
157 158 1.133482 CCAAAGGTTTGAGGTCAGGGT 60.133 52.381 3.95 0.00 40.55 4.34
158 159 1.956477 CAAAGGTTTGAGGTCAGGGTG 59.044 52.381 0.00 0.00 40.55 4.61
159 160 1.518367 AAGGTTTGAGGTCAGGGTGA 58.482 50.000 0.00 0.00 0.00 4.02
160 161 1.747444 AGGTTTGAGGTCAGGGTGAT 58.253 50.000 0.00 0.00 0.00 3.06
161 162 1.630878 AGGTTTGAGGTCAGGGTGATC 59.369 52.381 0.00 0.00 0.00 2.92
162 163 1.351017 GGTTTGAGGTCAGGGTGATCA 59.649 52.381 0.00 0.00 27.47 2.92
163 164 2.224769 GGTTTGAGGTCAGGGTGATCAA 60.225 50.000 0.00 0.00 27.47 2.57
164 165 2.814336 GTTTGAGGTCAGGGTGATCAAC 59.186 50.000 0.73 0.73 28.50 3.18
165 166 1.728323 TGAGGTCAGGGTGATCAACA 58.272 50.000 13.90 0.00 27.47 3.33
166 167 1.625315 TGAGGTCAGGGTGATCAACAG 59.375 52.381 13.90 4.50 27.47 3.16
167 168 1.902508 GAGGTCAGGGTGATCAACAGA 59.097 52.381 13.90 7.07 27.47 3.41
168 169 1.905215 AGGTCAGGGTGATCAACAGAG 59.095 52.381 13.90 1.36 27.47 3.35
169 170 1.677217 GGTCAGGGTGATCAACAGAGC 60.677 57.143 13.90 15.01 0.00 4.09
170 171 1.277557 GTCAGGGTGATCAACAGAGCT 59.722 52.381 13.90 0.00 0.00 4.09
171 172 1.552337 TCAGGGTGATCAACAGAGCTC 59.448 52.381 13.90 5.27 0.00 4.09
172 173 1.277273 CAGGGTGATCAACAGAGCTCA 59.723 52.381 17.77 0.00 0.00 4.26
173 174 1.980765 AGGGTGATCAACAGAGCTCAA 59.019 47.619 17.77 0.00 0.00 3.02
174 175 2.373169 AGGGTGATCAACAGAGCTCAAA 59.627 45.455 17.77 0.00 0.00 2.69
175 176 3.149196 GGGTGATCAACAGAGCTCAAAA 58.851 45.455 17.77 0.00 0.00 2.44
176 177 3.057946 GGGTGATCAACAGAGCTCAAAAC 60.058 47.826 17.77 2.45 0.00 2.43
177 178 3.364366 GGTGATCAACAGAGCTCAAAACG 60.364 47.826 17.77 0.00 0.00 3.60
178 179 3.494626 GTGATCAACAGAGCTCAAAACGA 59.505 43.478 17.77 5.92 0.00 3.85
179 180 3.742882 TGATCAACAGAGCTCAAAACGAG 59.257 43.478 17.77 0.00 45.37 4.18
187 188 2.918571 CTCAAAACGAGCTGGCTCA 58.081 52.632 20.39 1.39 42.86 4.26
188 189 0.514691 CTCAAAACGAGCTGGCTCAC 59.485 55.000 20.39 0.00 42.86 3.51
189 190 0.884704 TCAAAACGAGCTGGCTCACC 60.885 55.000 20.39 0.00 42.86 4.02
190 191 1.148273 AAAACGAGCTGGCTCACCA 59.852 52.632 20.39 0.00 46.51 4.17
198 199 4.728409 TGGCTCACCAGATTGCAG 57.272 55.556 0.00 0.00 42.67 4.41
199 200 1.676635 TGGCTCACCAGATTGCAGC 60.677 57.895 0.00 0.00 42.67 5.25
200 201 2.413142 GGCTCACCAGATTGCAGCC 61.413 63.158 0.00 0.00 42.87 4.85
201 202 1.676635 GCTCACCAGATTGCAGCCA 60.677 57.895 0.00 0.00 0.00 4.75
202 203 1.930908 GCTCACCAGATTGCAGCCAC 61.931 60.000 0.00 0.00 0.00 5.01
203 204 0.607217 CTCACCAGATTGCAGCCACA 60.607 55.000 0.00 0.00 0.00 4.17
204 205 0.178995 TCACCAGATTGCAGCCACAA 60.179 50.000 0.00 0.00 0.00 3.33
205 206 0.038892 CACCAGATTGCAGCCACAAC 60.039 55.000 0.00 0.00 31.03 3.32
206 207 0.467844 ACCAGATTGCAGCCACAACA 60.468 50.000 0.00 0.00 31.03 3.33
207 208 0.675083 CCAGATTGCAGCCACAACAA 59.325 50.000 0.00 0.00 31.03 2.83
208 209 1.336517 CCAGATTGCAGCCACAACAAG 60.337 52.381 0.00 0.00 31.03 3.16
209 210 0.963962 AGATTGCAGCCACAACAAGG 59.036 50.000 0.00 0.00 31.03 3.61
210 211 0.037975 GATTGCAGCCACAACAAGGG 60.038 55.000 0.00 0.00 31.03 3.95
217 218 3.344703 CCACAACAAGGGCATCAGA 57.655 52.632 0.00 0.00 0.00 3.27
218 219 1.843368 CCACAACAAGGGCATCAGAT 58.157 50.000 0.00 0.00 0.00 2.90
219 220 1.475280 CCACAACAAGGGCATCAGATG 59.525 52.381 5.98 5.98 0.00 2.90
220 221 2.439409 CACAACAAGGGCATCAGATGA 58.561 47.619 15.12 0.00 0.00 2.92
221 222 2.163010 CACAACAAGGGCATCAGATGAC 59.837 50.000 15.12 11.64 37.65 3.06
229 230 2.440409 GGCATCAGATGACCACAAAGT 58.560 47.619 15.12 0.00 29.82 2.66
230 231 2.163010 GGCATCAGATGACCACAAAGTG 59.837 50.000 15.12 0.00 29.82 3.16
239 240 4.577152 CACAAAGTGGTGGCAGGA 57.423 55.556 0.00 0.00 35.13 3.86
240 241 2.334307 CACAAAGTGGTGGCAGGAG 58.666 57.895 0.00 0.00 35.13 3.69
241 242 0.466189 CACAAAGTGGTGGCAGGAGT 60.466 55.000 0.00 0.00 35.13 3.85
242 243 0.466189 ACAAAGTGGTGGCAGGAGTG 60.466 55.000 0.00 0.00 0.00 3.51
255 256 2.981898 CAGGAGTGCATGATTCAGTGA 58.018 47.619 0.00 0.00 0.00 3.41
256 257 2.937149 CAGGAGTGCATGATTCAGTGAG 59.063 50.000 0.00 0.00 0.00 3.51
257 258 2.093075 AGGAGTGCATGATTCAGTGAGG 60.093 50.000 0.00 0.00 0.00 3.86
258 259 1.669779 GAGTGCATGATTCAGTGAGGC 59.330 52.381 0.00 0.00 0.00 4.70
259 260 1.003928 AGTGCATGATTCAGTGAGGCA 59.996 47.619 0.00 0.00 0.00 4.75
260 261 1.814394 GTGCATGATTCAGTGAGGCAA 59.186 47.619 0.00 0.00 0.00 4.52
261 262 1.814394 TGCATGATTCAGTGAGGCAAC 59.186 47.619 0.00 0.00 0.00 4.17
262 263 1.814394 GCATGATTCAGTGAGGCAACA 59.186 47.619 0.00 0.00 41.41 3.33
263 264 2.159421 GCATGATTCAGTGAGGCAACAG 60.159 50.000 0.00 0.00 41.41 3.16
264 265 3.340928 CATGATTCAGTGAGGCAACAGA 58.659 45.455 0.00 0.00 41.41 3.41
265 266 3.708403 TGATTCAGTGAGGCAACAGAT 57.292 42.857 0.00 0.00 41.41 2.90
266 267 3.340928 TGATTCAGTGAGGCAACAGATG 58.659 45.455 0.00 0.00 41.41 2.90
267 268 2.189594 TTCAGTGAGGCAACAGATGG 57.810 50.000 0.00 0.00 41.41 3.51
268 269 1.059098 TCAGTGAGGCAACAGATGGT 58.941 50.000 0.00 0.00 41.41 3.55
269 270 1.002430 TCAGTGAGGCAACAGATGGTC 59.998 52.381 0.00 0.00 41.41 4.02
270 271 1.059098 AGTGAGGCAACAGATGGTCA 58.941 50.000 0.00 0.00 41.41 4.02
271 272 1.421268 AGTGAGGCAACAGATGGTCAA 59.579 47.619 0.00 0.00 41.41 3.18
272 273 1.808945 GTGAGGCAACAGATGGTCAAG 59.191 52.381 0.00 0.00 41.41 3.02
273 274 1.271543 TGAGGCAACAGATGGTCAAGG 60.272 52.381 0.00 0.00 41.41 3.61
274 275 1.003580 GAGGCAACAGATGGTCAAGGA 59.996 52.381 0.00 0.00 41.41 3.36
275 276 1.004044 AGGCAACAGATGGTCAAGGAG 59.996 52.381 0.00 0.00 41.41 3.69
276 277 1.271597 GGCAACAGATGGTCAAGGAGT 60.272 52.381 0.00 0.00 0.00 3.85
277 278 2.027192 GGCAACAGATGGTCAAGGAGTA 60.027 50.000 0.00 0.00 0.00 2.59
278 279 3.370953 GGCAACAGATGGTCAAGGAGTAT 60.371 47.826 0.00 0.00 0.00 2.12
279 280 4.141711 GGCAACAGATGGTCAAGGAGTATA 60.142 45.833 0.00 0.00 0.00 1.47
280 281 4.811557 GCAACAGATGGTCAAGGAGTATAC 59.188 45.833 0.00 0.00 0.00 1.47
281 282 5.395768 GCAACAGATGGTCAAGGAGTATACT 60.396 44.000 4.68 4.68 0.00 2.12
282 283 6.183360 GCAACAGATGGTCAAGGAGTATACTA 60.183 42.308 5.09 0.00 0.00 1.82
283 284 6.963083 ACAGATGGTCAAGGAGTATACTAC 57.037 41.667 7.05 7.05 0.00 2.73
284 285 6.674573 ACAGATGGTCAAGGAGTATACTACT 58.325 40.000 12.19 12.19 39.29 2.57
285 286 7.813331 ACAGATGGTCAAGGAGTATACTACTA 58.187 38.462 18.25 4.73 35.72 1.82
286 287 7.720515 ACAGATGGTCAAGGAGTATACTACTAC 59.279 40.741 18.25 13.04 35.72 2.73
287 288 7.175293 CAGATGGTCAAGGAGTATACTACTACC 59.825 44.444 22.90 22.90 40.66 3.18
288 289 6.331577 TGGTCAAGGAGTATACTACTACCA 57.668 41.667 26.44 26.44 41.17 3.25
289 290 6.919158 TGGTCAAGGAGTATACTACTACCAT 58.081 40.000 26.44 8.15 39.48 3.55
290 291 7.359849 TGGTCAAGGAGTATACTACTACCATT 58.640 38.462 26.44 7.82 39.48 3.16
291 292 7.287005 TGGTCAAGGAGTATACTACTACCATTG 59.713 40.741 26.44 17.57 39.48 2.82
292 293 7.146648 GTCAAGGAGTATACTACTACCATTGC 58.853 42.308 18.25 5.49 40.66 3.56
293 294 6.837048 TCAAGGAGTATACTACTACCATTGCA 59.163 38.462 18.25 1.02 40.66 4.08
294 295 7.509318 TCAAGGAGTATACTACTACCATTGCAT 59.491 37.037 18.25 0.00 40.66 3.96
295 296 8.803235 CAAGGAGTATACTACTACCATTGCATA 58.197 37.037 18.25 0.00 40.66 3.14
296 297 8.951614 AGGAGTATACTACTACCATTGCATAA 57.048 34.615 16.46 0.00 40.66 1.90
297 298 9.026121 AGGAGTATACTACTACCATTGCATAAG 57.974 37.037 16.46 0.00 40.66 1.73
298 299 8.804204 GGAGTATACTACTACCATTGCATAAGT 58.196 37.037 7.95 0.00 39.59 2.24
299 300 9.627395 GAGTATACTACTACCATTGCATAAGTG 57.373 37.037 5.09 0.00 39.59 3.16
300 301 9.144298 AGTATACTACTACCATTGCATAAGTGT 57.856 33.333 2.75 0.00 37.23 3.55
303 304 9.929180 ATACTACTACCATTGCATAAGTGTATG 57.071 33.333 0.00 0.00 40.23 2.39
344 345 9.530633 AAAAAGGTACACAAATTTTGCGTATTA 57.469 25.926 11.88 0.00 31.64 0.98
346 347 9.530633 AAAGGTACACAAATTTTGCGTATTAAA 57.469 25.926 11.88 0.00 31.64 1.52
374 378 7.746703 AGAAATATTATAAAACGGAGGGAGCT 58.253 34.615 0.00 0.00 0.00 4.09
405 416 1.414181 AGGACAACTGGAGTGACACAG 59.586 52.381 8.59 5.88 40.48 3.66
463 474 1.101635 ATCGCCGAGATGAGGACGAA 61.102 55.000 0.00 0.00 39.37 3.85
606 621 2.370633 GCCCCTCTCCTTCTCCCT 59.629 66.667 0.00 0.00 0.00 4.20
638 654 2.780693 CCTCTCTCTCCACCCCCA 59.219 66.667 0.00 0.00 0.00 4.96
651 667 1.991813 CACCCCCAAAAATTCCCCAAT 59.008 47.619 0.00 0.00 0.00 3.16
692 708 2.507992 CGGCTTCAGGTGAGCGAG 60.508 66.667 0.00 0.00 0.00 5.03
717 733 5.475220 TCTCTGAATCCATCCGTATTCTCTC 59.525 44.000 0.00 0.00 34.00 3.20
744 760 1.071385 CCCTCCTCTCCGAATCAATGG 59.929 57.143 0.00 0.00 0.00 3.16
749 765 0.104855 TCTCCGAATCAATGGGAGCG 59.895 55.000 1.47 0.00 45.57 5.03
750 766 0.104855 CTCCGAATCAATGGGAGCGA 59.895 55.000 0.00 0.00 40.76 4.93
751 767 0.539518 TCCGAATCAATGGGAGCGAA 59.460 50.000 0.00 0.00 31.24 4.70
754 770 1.594862 CGAATCAATGGGAGCGAACTC 59.405 52.381 0.00 0.00 42.66 3.01
755 771 2.739932 CGAATCAATGGGAGCGAACTCT 60.740 50.000 0.00 0.00 42.98 3.24
757 773 1.561643 TCAATGGGAGCGAACTCTCT 58.438 50.000 0.00 0.00 44.49 3.10
759 775 0.107945 AATGGGAGCGAACTCTCTGC 60.108 55.000 0.00 0.00 44.49 4.26
760 776 2.202676 GGGAGCGAACTCTCTGCG 60.203 66.667 0.00 0.00 40.59 5.18
786 835 2.752322 TTTTCGCCGATCGTCGTGGT 62.752 55.000 18.67 0.00 38.40 4.16
796 845 2.686816 CGTCGTGGTGATTTGGGGC 61.687 63.158 0.00 0.00 0.00 5.80
840 889 1.611977 GCCTTTTTATATCGGGGTGCC 59.388 52.381 0.00 0.00 0.00 5.01
920 969 7.062371 CGGCGAATGATTGGTTTTGTTAATAAA 59.938 33.333 0.00 0.00 0.00 1.40
986 1043 2.749621 CCCTTTGATTCGAGGGTTCTTG 59.250 50.000 14.03 0.00 46.27 3.02
1322 1456 5.698832 TCTTCATTTAATTGCCACAAGTCG 58.301 37.500 0.00 0.00 0.00 4.18
1335 1469 3.970746 AAGTCGTACCCCCTCCCCG 62.971 68.421 0.00 0.00 0.00 5.73
1394 1543 1.457303 CTGCGCTAACACAGTTCAGTC 59.543 52.381 9.73 0.00 0.00 3.51
1395 1544 0.435008 GCGCTAACACAGTTCAGTCG 59.565 55.000 0.00 0.00 0.00 4.18
1396 1545 1.060713 CGCTAACACAGTTCAGTCGG 58.939 55.000 0.00 0.00 0.00 4.79
1497 1652 4.646572 TGTATAATGGTCACAGTGTTGCA 58.353 39.130 0.00 0.00 0.00 4.08
1503 1658 3.814625 TGGTCACAGTGTTGCATTCTTA 58.185 40.909 0.00 0.00 0.00 2.10
1552 1707 6.577103 TCTGCATTATGGACAAGAAGTAGAG 58.423 40.000 0.00 0.00 0.00 2.43
2033 2190 9.887629 ACAATATTTAATCATTTTGGTGCATCA 57.112 25.926 0.00 0.00 0.00 3.07
2125 2282 4.281941 TGTATATGGCTCGAATTCAGCTCT 59.718 41.667 21.34 14.52 37.05 4.09
2127 2284 3.827008 ATGGCTCGAATTCAGCTCTTA 57.173 42.857 21.34 11.35 37.05 2.10
2128 2285 2.893637 TGGCTCGAATTCAGCTCTTAC 58.106 47.619 21.34 10.66 37.05 2.34
2143 2301 4.107622 GCTCTTACGTTATTGCTTACGGA 58.892 43.478 0.00 0.00 41.81 4.69
2562 2734 3.131755 AGGAGCACGTTACCAGGTTATAC 59.868 47.826 0.00 0.00 0.00 1.47
2889 3061 6.040955 TCTCATAATGTGCCTCGAGTATTTCT 59.959 38.462 12.31 0.00 0.00 2.52
3489 3674 7.595819 AATTTTCACTAAGTGGGAACATGAA 57.404 32.000 0.00 0.00 46.14 2.57
4446 4805 6.899393 TTGATCTGCACTCATTTACCTTTT 57.101 33.333 0.00 0.00 0.00 2.27
4826 5186 6.749118 GCCAAAATAACTGAAGATTAGCAGTG 59.251 38.462 0.00 0.00 44.06 3.66
5596 5965 6.446318 TGCAATTAAGGTGTGAACAATCTTC 58.554 36.000 4.29 0.00 0.00 2.87
5636 6005 7.144722 TGTATTTATGCAACTTTCCTCTGTG 57.855 36.000 0.00 0.00 0.00 3.66
5685 6078 7.550906 AGCTCATTAGTCTTGAAGGAACAATAC 59.449 37.037 0.00 0.00 0.00 1.89
5714 6107 7.433425 GGCATAAAATGAGCTCTTGTTTACATC 59.567 37.037 16.19 8.69 0.00 3.06
5954 6354 6.970484 TCTGAAATAGCTTTGACTTTGGTTC 58.030 36.000 0.00 0.00 0.00 3.62
6293 6697 4.097892 ACTTGAGGGTAAGCAAAACAACAG 59.902 41.667 0.00 0.00 0.00 3.16
6431 6835 8.049117 TGATAGCAGAGGATGTTTTTGTTCTAT 58.951 33.333 0.00 0.00 0.00 1.98
6819 7224 7.909641 GCTTGTTGTGAAATTAATTGCAGTTTT 59.090 29.630 9.25 0.00 0.00 2.43
7121 7526 6.095300 CCCATGTTTTGTGATATACTCTTGCA 59.905 38.462 0.00 0.00 0.00 4.08
7126 7531 8.575589 TGTTTTGTGATATACTCTTGCATTTGT 58.424 29.630 0.00 0.00 0.00 2.83
7330 7816 6.663523 TGAGTATCACTTAGTTGGATGTCTGA 59.336 38.462 0.00 0.00 42.56 3.27
7498 7984 9.895138 GGTAACAATAGTCCTTTAGTGGAATAA 57.105 33.333 0.00 0.00 39.62 1.40
7540 8026 9.166173 TCAATTACATAACTTGGAACTGATCAG 57.834 33.333 21.37 21.37 29.57 2.90
7654 8140 6.433093 ACTGATAAATTGCTTTAACGACCCTT 59.567 34.615 0.00 0.00 30.88 3.95
7675 8161 5.362556 TTTGCAAAACATCTCTACTCTGC 57.637 39.130 10.02 0.00 0.00 4.26
7875 8361 1.609783 CCCTCCCCCTGCTGTTAAG 59.390 63.158 0.00 0.00 0.00 1.85
8233 8719 2.202932 ATCGACATCACCCAGCGC 60.203 61.111 0.00 0.00 0.00 5.92
8307 8793 1.502190 CTGACATGTGCTGCTGCTG 59.498 57.895 17.00 9.24 40.48 4.41
8308 8794 2.178521 GACATGTGCTGCTGCTGC 59.821 61.111 22.51 22.51 40.48 5.25
8309 8795 2.282251 ACATGTGCTGCTGCTGCT 60.282 55.556 27.67 9.19 40.48 4.24
8365 8851 0.385598 GAGTTCCGCGAAAAGTTGGC 60.386 55.000 8.23 0.00 0.00 4.52
8371 8857 0.454957 CGCGAAAAGTTGGCCATGAG 60.455 55.000 6.09 0.00 0.00 2.90
8494 8980 3.687125 TCTTCTCTTCACCTAGCTCGAA 58.313 45.455 0.00 0.00 0.00 3.71
8497 8983 2.614520 TCTCTTCACCTAGCTCGAATCG 59.385 50.000 0.00 0.00 0.00 3.34
8501 8987 4.820173 TCTTCACCTAGCTCGAATCGATTA 59.180 41.667 11.38 1.43 34.61 1.75
8540 9029 7.727181 TGCTTCTTCCAGTAAATATAGGTCTC 58.273 38.462 0.00 0.00 0.00 3.36
8587 9081 0.036022 AGCTCAGGCAGGTTCTGTTC 59.964 55.000 0.00 0.00 41.70 3.18
8596 9090 1.376037 GGTTCTGTTCTGGGGCTCG 60.376 63.158 0.00 0.00 0.00 5.03
8672 9170 2.743126 GGCAGCAGAGATAAGCATGATC 59.257 50.000 0.00 0.00 0.00 2.92
8674 9173 2.994578 CAGCAGAGATAAGCATGATCGG 59.005 50.000 0.00 0.00 28.39 4.18
8703 9232 4.008933 GCCTGGTGCGTCAGAGGT 62.009 66.667 7.57 0.00 36.93 3.85
8704 9233 2.743718 CCTGGTGCGTCAGAGGTT 59.256 61.111 7.57 0.00 36.93 3.50
8705 9234 1.374758 CCTGGTGCGTCAGAGGTTC 60.375 63.158 7.57 0.00 36.93 3.62
8706 9235 1.367471 CTGGTGCGTCAGAGGTTCA 59.633 57.895 0.35 0.00 36.93 3.18
8707 9236 0.668706 CTGGTGCGTCAGAGGTTCAG 60.669 60.000 0.35 0.00 36.93 3.02
8708 9237 1.374758 GGTGCGTCAGAGGTTCAGG 60.375 63.158 0.00 0.00 0.00 3.86
8709 9238 1.367840 GTGCGTCAGAGGTTCAGGT 59.632 57.895 0.00 0.00 0.00 4.00
8710 9239 0.946221 GTGCGTCAGAGGTTCAGGTG 60.946 60.000 0.00 0.00 0.00 4.00
8711 9240 2.029844 GCGTCAGAGGTTCAGGTGC 61.030 63.158 0.00 0.00 0.00 5.01
8712 9241 1.734477 CGTCAGAGGTTCAGGTGCG 60.734 63.158 0.00 0.00 0.00 5.34
8713 9242 1.666011 GTCAGAGGTTCAGGTGCGA 59.334 57.895 0.00 0.00 0.00 5.10
8714 9243 0.033504 GTCAGAGGTTCAGGTGCGAA 59.966 55.000 0.00 0.00 0.00 4.70
8715 9244 0.756294 TCAGAGGTTCAGGTGCGAAA 59.244 50.000 0.00 0.00 0.00 3.46
8716 9245 0.868406 CAGAGGTTCAGGTGCGAAAC 59.132 55.000 0.00 0.00 32.47 2.78
8717 9246 0.468226 AGAGGTTCAGGTGCGAAACA 59.532 50.000 0.00 0.00 34.90 2.83
8718 9247 1.134220 AGAGGTTCAGGTGCGAAACAA 60.134 47.619 0.00 0.00 34.90 2.83
8719 9248 1.264288 GAGGTTCAGGTGCGAAACAAG 59.736 52.381 0.00 0.00 34.90 3.16
8720 9249 0.310854 GGTTCAGGTGCGAAACAAGG 59.689 55.000 0.00 0.00 32.59 3.61
8721 9250 0.310854 GTTCAGGTGCGAAACAAGGG 59.689 55.000 0.00 0.00 0.00 3.95
8722 9251 1.452145 TTCAGGTGCGAAACAAGGGC 61.452 55.000 0.00 0.00 0.00 5.19
8723 9252 2.978010 AGGTGCGAAACAAGGGCG 60.978 61.111 0.00 0.00 0.00 6.13
8727 9256 2.744709 GCGAAACAAGGGCGCCTA 60.745 61.111 28.56 0.00 44.55 3.93
8728 9257 2.329614 GCGAAACAAGGGCGCCTAA 61.330 57.895 28.56 0.00 44.55 2.69
8729 9258 1.858372 GCGAAACAAGGGCGCCTAAA 61.858 55.000 28.56 0.00 44.55 1.85
8730 9259 0.109919 CGAAACAAGGGCGCCTAAAC 60.110 55.000 28.56 9.72 31.13 2.01
8824 9355 1.967319 CGTGGGTAGCTGCCATTAAT 58.033 50.000 23.21 0.00 0.00 1.40
8825 9356 1.873591 CGTGGGTAGCTGCCATTAATC 59.126 52.381 23.21 4.36 0.00 1.75
8826 9357 2.744823 CGTGGGTAGCTGCCATTAATCA 60.745 50.000 23.21 7.15 0.00 2.57
8827 9358 3.490348 GTGGGTAGCTGCCATTAATCAT 58.510 45.455 23.21 0.00 0.00 2.45
8828 9359 3.503748 GTGGGTAGCTGCCATTAATCATC 59.496 47.826 23.21 2.09 0.00 2.92
8829 9360 3.084786 GGGTAGCTGCCATTAATCATCC 58.915 50.000 23.21 0.00 0.00 3.51
8830 9361 3.498481 GGGTAGCTGCCATTAATCATCCA 60.498 47.826 23.21 0.00 0.00 3.41
8831 9362 4.338879 GGTAGCTGCCATTAATCATCCAT 58.661 43.478 16.95 0.00 0.00 3.41
8832 9363 4.397417 GGTAGCTGCCATTAATCATCCATC 59.603 45.833 16.95 0.00 0.00 3.51
8833 9364 4.108501 AGCTGCCATTAATCATCCATCA 57.891 40.909 0.00 0.00 0.00 3.07
8834 9365 4.079970 AGCTGCCATTAATCATCCATCAG 58.920 43.478 0.00 0.00 0.00 2.90
8835 9366 3.367087 GCTGCCATTAATCATCCATCAGC 60.367 47.826 0.00 0.00 37.78 4.26
8836 9367 2.815503 TGCCATTAATCATCCATCAGCG 59.184 45.455 0.00 0.00 0.00 5.18
8837 9368 3.076621 GCCATTAATCATCCATCAGCGA 58.923 45.455 0.00 0.00 0.00 4.93
8838 9369 3.126514 GCCATTAATCATCCATCAGCGAG 59.873 47.826 0.00 0.00 0.00 5.03
8839 9370 4.572909 CCATTAATCATCCATCAGCGAGA 58.427 43.478 0.00 0.00 0.00 4.04
8840 9371 4.999311 CCATTAATCATCCATCAGCGAGAA 59.001 41.667 0.00 0.00 0.00 2.87
8841 9372 5.646793 CCATTAATCATCCATCAGCGAGAAT 59.353 40.000 0.00 0.00 0.00 2.40
8842 9373 6.403309 CCATTAATCATCCATCAGCGAGAATG 60.403 42.308 0.00 0.00 0.00 2.67
8843 9374 3.766068 ATCATCCATCAGCGAGAATGT 57.234 42.857 0.00 0.00 0.00 2.71
8844 9375 4.879197 ATCATCCATCAGCGAGAATGTA 57.121 40.909 0.00 0.00 0.00 2.29
8845 9376 4.879197 TCATCCATCAGCGAGAATGTAT 57.121 40.909 0.00 0.00 0.00 2.29
8846 9377 4.814147 TCATCCATCAGCGAGAATGTATC 58.186 43.478 0.00 0.00 0.00 2.24
8847 9378 3.667497 TCCATCAGCGAGAATGTATCC 57.333 47.619 0.00 0.00 0.00 2.59
8848 9379 2.965147 TCCATCAGCGAGAATGTATCCA 59.035 45.455 0.00 0.00 0.00 3.41
8849 9380 3.006217 TCCATCAGCGAGAATGTATCCAG 59.994 47.826 0.00 0.00 0.00 3.86
8850 9381 3.244009 CCATCAGCGAGAATGTATCCAGT 60.244 47.826 0.00 0.00 0.00 4.00
8851 9382 4.021981 CCATCAGCGAGAATGTATCCAGTA 60.022 45.833 0.00 0.00 0.00 2.74
8852 9383 5.337089 CCATCAGCGAGAATGTATCCAGTAT 60.337 44.000 0.00 0.00 0.00 2.12
8853 9384 5.791336 TCAGCGAGAATGTATCCAGTATT 57.209 39.130 0.00 0.00 0.00 1.89
8854 9385 5.773575 TCAGCGAGAATGTATCCAGTATTC 58.226 41.667 0.00 0.00 0.00 1.75
8855 9386 5.536538 TCAGCGAGAATGTATCCAGTATTCT 59.463 40.000 0.00 0.00 42.21 2.40
8856 9387 5.861251 CAGCGAGAATGTATCCAGTATTCTC 59.139 44.000 13.45 13.45 46.71 2.87
8860 9391 7.630470 GAGAATGTATCCAGTATTCTCGTTG 57.370 40.000 9.58 0.00 43.73 4.10
8861 9392 5.986135 AGAATGTATCCAGTATTCTCGTTGC 59.014 40.000 0.00 0.00 36.68 4.17
8862 9393 4.729227 TGTATCCAGTATTCTCGTTGCA 57.271 40.909 0.00 0.00 0.00 4.08
8863 9394 5.276461 TGTATCCAGTATTCTCGTTGCAT 57.724 39.130 0.00 0.00 0.00 3.96
8864 9395 5.289595 TGTATCCAGTATTCTCGTTGCATC 58.710 41.667 0.00 0.00 0.00 3.91
8865 9396 4.679373 ATCCAGTATTCTCGTTGCATCT 57.321 40.909 0.00 0.00 0.00 2.90
8866 9397 3.785486 TCCAGTATTCTCGTTGCATCTG 58.215 45.455 0.00 0.00 0.00 2.90
8867 9398 3.447229 TCCAGTATTCTCGTTGCATCTGA 59.553 43.478 0.00 0.00 0.00 3.27
8868 9399 4.081697 TCCAGTATTCTCGTTGCATCTGAA 60.082 41.667 0.00 0.00 0.00 3.02
8874 9405 3.732212 TCTCGTTGCATCTGAATATGGG 58.268 45.455 0.00 0.00 0.00 4.00
8876 9407 3.879295 CTCGTTGCATCTGAATATGGGTT 59.121 43.478 0.00 0.00 0.00 4.11
8879 9410 4.024048 CGTTGCATCTGAATATGGGTTACC 60.024 45.833 0.00 0.00 37.24 2.85
8896 9427 2.697761 CCACTGCTGCATCTGTGGC 61.698 63.158 26.87 9.75 44.93 5.01
8904 9435 0.469705 TGCATCTGTGGCTTTTGGGT 60.470 50.000 0.00 0.00 0.00 4.51
8913 9444 0.243636 GGCTTTTGGGTCGTTGGATG 59.756 55.000 0.00 0.00 0.00 3.51
8932 9463 3.433306 TGGGAAAACGATGGACAAGAT 57.567 42.857 0.00 0.00 0.00 2.40
8938 9469 2.408271 ACGATGGACAAGATGCACAT 57.592 45.000 0.00 0.00 0.00 3.21
8942 9473 4.699735 ACGATGGACAAGATGCACATTTTA 59.300 37.500 0.00 0.00 0.00 1.52
8943 9474 5.163723 ACGATGGACAAGATGCACATTTTAG 60.164 40.000 0.00 0.00 0.00 1.85
8945 9476 6.403527 CGATGGACAAGATGCACATTTTAGAA 60.404 38.462 0.00 0.00 0.00 2.10
8946 9477 6.258230 TGGACAAGATGCACATTTTAGAAG 57.742 37.500 0.00 0.00 0.00 2.85
8947 9478 5.769662 TGGACAAGATGCACATTTTAGAAGT 59.230 36.000 0.00 0.00 0.00 3.01
8948 9479 6.939730 TGGACAAGATGCACATTTTAGAAGTA 59.060 34.615 0.00 0.00 0.00 2.24
8949 9480 7.446931 TGGACAAGATGCACATTTTAGAAGTAA 59.553 33.333 0.00 0.00 0.00 2.24
8950 9481 8.462016 GGACAAGATGCACATTTTAGAAGTAAT 58.538 33.333 0.00 0.00 0.00 1.89
8951 9482 9.495754 GACAAGATGCACATTTTAGAAGTAATC 57.504 33.333 0.00 0.00 0.00 1.75
8976 9572 6.974622 CACTATGTATTTGTCAAAGCCAATCC 59.025 38.462 4.03 0.00 0.00 3.01
8988 9584 1.776034 GCCAATCCGTGCTCCGATTC 61.776 60.000 0.27 0.00 39.56 2.52
8990 9586 1.227263 AATCCGTGCTCCGATTCCG 60.227 57.895 0.00 0.00 39.56 4.30
8991 9587 3.792053 ATCCGTGCTCCGATTCCGC 62.792 63.158 0.00 0.00 39.56 5.54
8992 9588 4.812476 CCGTGCTCCGATTCCGCA 62.812 66.667 0.00 0.00 39.56 5.69
8993 9589 3.257561 CGTGCTCCGATTCCGCAG 61.258 66.667 0.00 0.00 39.56 5.18
8994 9590 2.125512 GTGCTCCGATTCCGCAGT 60.126 61.111 0.00 0.00 33.84 4.40
8995 9591 1.141019 GTGCTCCGATTCCGCAGTA 59.859 57.895 0.00 0.00 33.84 2.74
8996 9592 0.872021 GTGCTCCGATTCCGCAGTAG 60.872 60.000 0.00 0.00 33.84 2.57
8997 9593 1.320344 TGCTCCGATTCCGCAGTAGT 61.320 55.000 0.00 0.00 0.00 2.73
9000 9596 2.194271 CTCCGATTCCGCAGTAGTTTC 58.806 52.381 0.00 0.00 0.00 2.78
9001 9597 1.546923 TCCGATTCCGCAGTAGTTTCA 59.453 47.619 0.00 0.00 0.00 2.69
9002 9598 2.167693 TCCGATTCCGCAGTAGTTTCAT 59.832 45.455 0.00 0.00 0.00 2.57
9004 9600 3.242413 CCGATTCCGCAGTAGTTTCATTG 60.242 47.826 0.00 0.00 0.00 2.82
9005 9601 3.370978 CGATTCCGCAGTAGTTTCATTGT 59.629 43.478 0.00 0.00 0.00 2.71
9008 9604 5.508200 TTCCGCAGTAGTTTCATTGTTTT 57.492 34.783 0.00 0.00 0.00 2.43
9009 9605 4.854399 TCCGCAGTAGTTTCATTGTTTTG 58.146 39.130 0.00 0.00 0.00 2.44
9022 9622 7.736447 TTCATTGTTTTGGTGTTTCAAGTTT 57.264 28.000 0.00 0.00 0.00 2.66
9029 9629 5.913137 TTGGTGTTTCAAGTTTCTCATGT 57.087 34.783 0.00 0.00 0.00 3.21
9030 9630 5.247507 TGGTGTTTCAAGTTTCTCATGTG 57.752 39.130 0.00 0.00 0.00 3.21
9032 9632 4.044426 GTGTTTCAAGTTTCTCATGTGCC 58.956 43.478 0.00 0.00 0.00 5.01
9047 9647 7.613585 TCTCATGTGCCACATTTCAATTTAAT 58.386 30.769 7.80 0.00 36.53 1.40
9050 9650 6.238610 TGTGCCACATTTCAATTTAATTGC 57.761 33.333 12.39 0.00 40.05 3.56
9053 9653 4.391523 GCCACATTTCAATTTAATTGCGGT 59.608 37.500 12.39 5.46 40.05 5.68
9059 9659 8.067189 ACATTTCAATTTAATTGCGGTTTTCAC 58.933 29.630 12.39 0.00 40.05 3.18
9061 9661 7.539712 TTCAATTTAATTGCGGTTTTCACAA 57.460 28.000 12.39 0.00 40.05 3.33
9063 9663 7.974675 TCAATTTAATTGCGGTTTTCACAAAA 58.025 26.923 12.39 0.00 40.05 2.44
9065 9665 8.732227 CAATTTAATTGCGGTTTTCACAAAAAG 58.268 29.630 4.66 0.00 32.76 2.27
9067 9667 7.596749 TTAATTGCGGTTTTCACAAAAAGAA 57.403 28.000 0.00 0.00 35.10 2.52
9068 9668 6.676237 AATTGCGGTTTTCACAAAAAGAAT 57.324 29.167 0.00 0.00 35.10 2.40
9069 9669 5.462034 TTGCGGTTTTCACAAAAAGAATG 57.538 34.783 0.00 0.00 35.10 2.67
9070 9670 4.748892 TGCGGTTTTCACAAAAAGAATGA 58.251 34.783 0.00 0.00 35.10 2.57
9103 9703 7.516198 AAGATGCACAAAGATTAGTTGAGTT 57.484 32.000 0.00 0.00 0.00 3.01
9138 9738 3.195182 TCCGTTATTCATTGTACGTCCCA 59.805 43.478 0.00 0.00 32.45 4.37
9177 9777 9.959721 TTATTAACTGAGATTTAGCTGAGGTTT 57.040 29.630 0.00 0.00 0.00 3.27
9178 9779 7.907214 TTAACTGAGATTTAGCTGAGGTTTC 57.093 36.000 0.00 0.00 0.00 2.78
9224 9826 5.183904 ACAACTATTCATTGTGCTTTCTCCC 59.816 40.000 0.00 0.00 38.84 4.30
9225 9827 5.184892 ACTATTCATTGTGCTTTCTCCCT 57.815 39.130 0.00 0.00 0.00 4.20
9308 9913 7.659390 AGGTCTAAGATGAAGTTTGACAGAAAG 59.341 37.037 0.00 0.00 33.09 2.62
9347 9952 7.589958 ACCACAATTTTACCATAGTGAAACA 57.410 32.000 0.00 0.00 41.43 2.83
9349 9954 6.580791 CCACAATTTTACCATAGTGAAACACG 59.419 38.462 0.00 0.00 41.43 4.49
9354 9959 6.971527 TTTACCATAGTGAAACACGTATGG 57.028 37.500 22.73 22.73 43.21 2.74
9356 9961 5.155278 ACCATAGTGAAACACGTATGGAA 57.845 39.130 26.68 0.00 41.93 3.53
9357 9962 5.741011 ACCATAGTGAAACACGTATGGAAT 58.259 37.500 26.68 14.87 41.93 3.01
9358 9963 6.177610 ACCATAGTGAAACACGTATGGAATT 58.822 36.000 26.68 14.47 41.93 2.17
9376 9981 6.392354 TGGAATTGAGAAATCATCAAGCAAC 58.608 36.000 0.00 0.00 39.86 4.17
9377 9982 6.015265 TGGAATTGAGAAATCATCAAGCAACA 60.015 34.615 0.00 0.00 39.86 3.33
9378 9983 6.530534 GGAATTGAGAAATCATCAAGCAACAG 59.469 38.462 0.00 0.00 39.86 3.16
9381 9986 4.216902 TGAGAAATCATCAAGCAACAGTGG 59.783 41.667 0.00 0.00 0.00 4.00
9436 10041 9.883142 ATGAAGAAATGTGTGGTTTTAGAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.447229 GGTCCCCCATAAATGTTCAACAG 59.553 47.826 0.00 0.00 0.00 3.16
2 3 3.708451 AGGTCCCCCATAAATGTTCAAC 58.292 45.455 0.00 0.00 0.00 3.18
4 5 6.850263 TTATAGGTCCCCCATAAATGTTCA 57.150 37.500 0.00 0.00 0.00 3.18
5 6 6.890268 GGATTATAGGTCCCCCATAAATGTTC 59.110 42.308 0.00 0.00 0.00 3.18
6 7 6.570393 AGGATTATAGGTCCCCCATAAATGTT 59.430 38.462 3.35 0.00 36.36 2.71
7 8 6.011628 CAGGATTATAGGTCCCCCATAAATGT 60.012 42.308 3.35 0.00 36.36 2.71
8 9 6.426587 CAGGATTATAGGTCCCCCATAAATG 58.573 44.000 3.35 0.00 36.36 2.32
9 10 5.496168 CCAGGATTATAGGTCCCCCATAAAT 59.504 44.000 3.35 0.00 36.36 1.40
10 11 4.855599 CCAGGATTATAGGTCCCCCATAAA 59.144 45.833 3.35 0.00 36.36 1.40
11 12 4.112260 TCCAGGATTATAGGTCCCCCATAA 59.888 45.833 0.00 0.00 36.36 1.90
12 13 3.675693 TCCAGGATTATAGGTCCCCCATA 59.324 47.826 0.00 0.00 36.36 2.74
13 14 2.462688 TCCAGGATTATAGGTCCCCCAT 59.537 50.000 0.00 0.00 36.36 4.00
14 15 1.877160 TCCAGGATTATAGGTCCCCCA 59.123 52.381 0.00 0.00 36.36 4.96
15 16 2.552367 CTCCAGGATTATAGGTCCCCC 58.448 57.143 0.00 0.00 36.36 5.40
16 17 2.157989 ACCTCCAGGATTATAGGTCCCC 60.158 54.545 0.00 0.00 37.87 4.81
17 18 2.907042 CACCTCCAGGATTATAGGTCCC 59.093 54.545 0.00 0.00 40.39 4.46
18 19 2.907042 CCACCTCCAGGATTATAGGTCC 59.093 54.545 0.00 0.00 40.39 4.46
19 20 3.579151 GTCCACCTCCAGGATTATAGGTC 59.421 52.174 0.00 0.00 40.39 3.85
20 21 3.210074 AGTCCACCTCCAGGATTATAGGT 59.790 47.826 0.00 0.00 43.15 3.08
21 22 3.580458 CAGTCCACCTCCAGGATTATAGG 59.420 52.174 0.00 0.00 37.52 2.57
22 23 3.007398 GCAGTCCACCTCCAGGATTATAG 59.993 52.174 0.00 0.00 37.52 1.31
23 24 2.972713 GCAGTCCACCTCCAGGATTATA 59.027 50.000 0.00 0.00 37.52 0.98
24 25 1.771255 GCAGTCCACCTCCAGGATTAT 59.229 52.381 0.00 0.00 37.52 1.28
25 26 1.204146 GCAGTCCACCTCCAGGATTA 58.796 55.000 0.00 0.00 37.52 1.75
26 27 1.903877 CGCAGTCCACCTCCAGGATT 61.904 60.000 0.00 0.00 37.52 3.01
27 28 2.362369 CGCAGTCCACCTCCAGGAT 61.362 63.158 0.00 0.00 37.52 3.24
28 29 2.997315 CGCAGTCCACCTCCAGGA 60.997 66.667 0.00 0.00 38.94 3.86
29 30 4.767255 GCGCAGTCCACCTCCAGG 62.767 72.222 0.30 0.00 42.17 4.45
30 31 3.699894 AGCGCAGTCCACCTCCAG 61.700 66.667 11.47 0.00 0.00 3.86
31 32 4.007644 CAGCGCAGTCCACCTCCA 62.008 66.667 11.47 0.00 0.00 3.86
33 34 4.687215 TGCAGCGCAGTCCACCTC 62.687 66.667 11.47 0.00 33.32 3.85
46 47 3.850098 AAGTTCCGGCCCACTGCAG 62.850 63.158 13.48 13.48 43.89 4.41
47 48 3.884774 AAGTTCCGGCCCACTGCA 61.885 61.111 0.00 0.00 43.89 4.41
48 49 3.365265 CAAGTTCCGGCCCACTGC 61.365 66.667 0.00 0.00 40.16 4.40
49 50 1.002134 ATCAAGTTCCGGCCCACTG 60.002 57.895 0.00 0.00 0.00 3.66
50 51 1.201429 AGATCAAGTTCCGGCCCACT 61.201 55.000 0.00 0.00 0.00 4.00
51 52 0.744771 GAGATCAAGTTCCGGCCCAC 60.745 60.000 0.00 0.00 0.00 4.61
52 53 1.602237 GAGATCAAGTTCCGGCCCA 59.398 57.895 0.00 0.00 0.00 5.36
53 54 1.521681 CGAGATCAAGTTCCGGCCC 60.522 63.158 0.00 0.00 0.00 5.80
54 55 1.521681 CCGAGATCAAGTTCCGGCC 60.522 63.158 0.00 0.00 33.47 6.13
55 56 0.528684 CTCCGAGATCAAGTTCCGGC 60.529 60.000 0.00 0.00 39.96 6.13
56 57 0.103208 CCTCCGAGATCAAGTTCCGG 59.897 60.000 0.00 0.00 41.36 5.14
57 58 1.103803 TCCTCCGAGATCAAGTTCCG 58.896 55.000 0.00 0.00 0.00 4.30
58 59 1.137282 GGTCCTCCGAGATCAAGTTCC 59.863 57.143 0.00 0.00 0.00 3.62
59 60 1.137282 GGGTCCTCCGAGATCAAGTTC 59.863 57.143 0.00 0.00 33.83 3.01
60 61 1.196012 GGGTCCTCCGAGATCAAGTT 58.804 55.000 0.00 0.00 33.83 2.66
61 62 0.688087 GGGGTCCTCCGAGATCAAGT 60.688 60.000 0.00 0.00 36.01 3.16
62 63 0.397816 AGGGGTCCTCCGAGATCAAG 60.398 60.000 0.00 0.00 36.01 3.02
63 64 0.687757 CAGGGGTCCTCCGAGATCAA 60.688 60.000 0.00 0.00 36.01 2.57
64 65 1.075970 CAGGGGTCCTCCGAGATCA 60.076 63.158 0.00 0.00 36.01 2.92
65 66 2.503382 GCAGGGGTCCTCCGAGATC 61.503 68.421 0.00 0.00 36.01 2.75
66 67 2.444895 GCAGGGGTCCTCCGAGAT 60.445 66.667 0.00 0.00 36.01 2.75
67 68 3.539593 TTGCAGGGGTCCTCCGAGA 62.540 63.158 0.00 0.00 36.01 4.04
68 69 3.003173 TTGCAGGGGTCCTCCGAG 61.003 66.667 0.00 0.00 36.01 4.63
69 70 3.003173 CTTGCAGGGGTCCTCCGA 61.003 66.667 0.00 0.00 36.01 4.55
70 71 3.316573 GACTTGCAGGGGTCCTCCG 62.317 68.421 0.00 0.00 36.01 4.63
71 72 2.671682 GACTTGCAGGGGTCCTCC 59.328 66.667 0.00 0.00 0.00 4.30
72 73 2.266055 CGACTTGCAGGGGTCCTC 59.734 66.667 0.00 0.00 0.00 3.71
73 74 2.526873 ACGACTTGCAGGGGTCCT 60.527 61.111 0.00 0.00 0.00 3.85
74 75 1.255667 TAGACGACTTGCAGGGGTCC 61.256 60.000 15.46 3.03 0.00 4.46
75 76 0.173708 CTAGACGACTTGCAGGGGTC 59.826 60.000 12.43 12.43 0.00 4.46
76 77 1.889530 GCTAGACGACTTGCAGGGGT 61.890 60.000 15.13 0.00 42.57 4.95
77 78 1.153549 GCTAGACGACTTGCAGGGG 60.154 63.158 15.13 0.00 42.57 4.79
78 79 1.103803 TAGCTAGACGACTTGCAGGG 58.896 55.000 20.71 0.00 44.68 4.45
79 80 2.736978 CATAGCTAGACGACTTGCAGG 58.263 52.381 20.71 7.94 44.68 4.85
80 81 2.123342 GCATAGCTAGACGACTTGCAG 58.877 52.381 20.71 12.20 44.68 4.41
81 82 1.476488 TGCATAGCTAGACGACTTGCA 59.524 47.619 20.71 14.04 44.68 4.08
82 83 2.209838 TGCATAGCTAGACGACTTGC 57.790 50.000 12.62 12.62 43.14 4.01
83 84 4.363138 TGATTGCATAGCTAGACGACTTG 58.637 43.478 0.00 0.00 0.00 3.16
84 85 4.655762 TGATTGCATAGCTAGACGACTT 57.344 40.909 0.00 0.00 0.00 3.01
85 86 4.862902 ATGATTGCATAGCTAGACGACT 57.137 40.909 0.00 0.00 31.57 4.18
96 97 8.907222 TTCTTTATGTCAGCTATGATTGCATA 57.093 30.769 1.19 0.00 37.87 3.14
97 98 7.812690 TTCTTTATGTCAGCTATGATTGCAT 57.187 32.000 1.19 0.00 37.87 3.96
98 99 7.628769 TTTCTTTATGTCAGCTATGATTGCA 57.371 32.000 1.19 0.00 37.87 4.08
99 100 7.433425 GGTTTTCTTTATGTCAGCTATGATTGC 59.567 37.037 0.00 0.00 37.87 3.56
100 101 8.680903 AGGTTTTCTTTATGTCAGCTATGATTG 58.319 33.333 0.00 0.00 37.87 2.67
101 102 8.814038 AGGTTTTCTTTATGTCAGCTATGATT 57.186 30.769 0.00 0.00 37.87 2.57
102 103 8.049117 TGAGGTTTTCTTTATGTCAGCTATGAT 58.951 33.333 0.00 0.00 37.87 2.45
103 104 7.394016 TGAGGTTTTCTTTATGTCAGCTATGA 58.606 34.615 0.00 0.00 0.00 2.15
104 105 7.615582 TGAGGTTTTCTTTATGTCAGCTATG 57.384 36.000 0.00 0.00 0.00 2.23
105 106 8.635765 TTTGAGGTTTTCTTTATGTCAGCTAT 57.364 30.769 0.00 0.00 0.00 2.97
106 107 8.514594 CATTTGAGGTTTTCTTTATGTCAGCTA 58.485 33.333 0.00 0.00 0.00 3.32
107 108 6.959639 TTTGAGGTTTTCTTTATGTCAGCT 57.040 33.333 0.00 0.00 0.00 4.24
108 109 6.089954 GCATTTGAGGTTTTCTTTATGTCAGC 59.910 38.462 0.00 0.00 0.00 4.26
109 110 6.587608 GGCATTTGAGGTTTTCTTTATGTCAG 59.412 38.462 0.00 0.00 0.00 3.51
110 111 6.267471 AGGCATTTGAGGTTTTCTTTATGTCA 59.733 34.615 0.00 0.00 0.00 3.58
111 112 6.691508 AGGCATTTGAGGTTTTCTTTATGTC 58.308 36.000 0.00 0.00 0.00 3.06
112 113 6.670695 AGGCATTTGAGGTTTTCTTTATGT 57.329 33.333 0.00 0.00 0.00 2.29
113 114 6.591448 GGAAGGCATTTGAGGTTTTCTTTATG 59.409 38.462 0.00 0.00 0.00 1.90
114 115 6.269769 TGGAAGGCATTTGAGGTTTTCTTTAT 59.730 34.615 0.00 0.00 0.00 1.40
115 116 5.600484 TGGAAGGCATTTGAGGTTTTCTTTA 59.400 36.000 0.00 0.00 0.00 1.85
116 117 4.408596 TGGAAGGCATTTGAGGTTTTCTTT 59.591 37.500 0.00 0.00 0.00 2.52
117 118 3.966665 TGGAAGGCATTTGAGGTTTTCTT 59.033 39.130 0.00 0.00 0.00 2.52
118 119 3.575805 TGGAAGGCATTTGAGGTTTTCT 58.424 40.909 0.00 0.00 0.00 2.52
119 120 4.335400 TTGGAAGGCATTTGAGGTTTTC 57.665 40.909 0.00 0.00 0.00 2.29
120 121 4.444733 CCTTTGGAAGGCATTTGAGGTTTT 60.445 41.667 0.00 0.00 42.78 2.43
121 122 3.071457 CCTTTGGAAGGCATTTGAGGTTT 59.929 43.478 0.00 0.00 42.78 3.27
122 123 2.634453 CCTTTGGAAGGCATTTGAGGTT 59.366 45.455 0.00 0.00 42.78 3.50
123 124 2.250924 CCTTTGGAAGGCATTTGAGGT 58.749 47.619 0.00 0.00 42.78 3.85
134 135 2.887152 CCTGACCTCAAACCTTTGGAAG 59.113 50.000 0.00 0.00 38.66 3.46
135 136 2.424234 CCCTGACCTCAAACCTTTGGAA 60.424 50.000 0.00 0.00 38.66 3.53
136 137 1.144913 CCCTGACCTCAAACCTTTGGA 59.855 52.381 0.00 0.00 38.66 3.53
137 138 1.133482 ACCCTGACCTCAAACCTTTGG 60.133 52.381 0.00 0.00 38.66 3.28
138 139 1.956477 CACCCTGACCTCAAACCTTTG 59.044 52.381 0.00 0.00 39.48 2.77
139 140 1.850345 TCACCCTGACCTCAAACCTTT 59.150 47.619 0.00 0.00 0.00 3.11
140 141 1.518367 TCACCCTGACCTCAAACCTT 58.482 50.000 0.00 0.00 0.00 3.50
141 142 1.630878 GATCACCCTGACCTCAAACCT 59.369 52.381 0.00 0.00 0.00 3.50
142 143 1.351017 TGATCACCCTGACCTCAAACC 59.649 52.381 0.00 0.00 0.00 3.27
143 144 2.814336 GTTGATCACCCTGACCTCAAAC 59.186 50.000 0.00 0.00 30.14 2.93
144 145 2.441375 TGTTGATCACCCTGACCTCAAA 59.559 45.455 0.00 0.00 30.14 2.69
145 146 2.038952 CTGTTGATCACCCTGACCTCAA 59.961 50.000 0.00 0.00 0.00 3.02
146 147 1.625315 CTGTTGATCACCCTGACCTCA 59.375 52.381 0.00 0.00 0.00 3.86
147 148 1.902508 TCTGTTGATCACCCTGACCTC 59.097 52.381 0.00 0.00 0.00 3.85
148 149 1.905215 CTCTGTTGATCACCCTGACCT 59.095 52.381 0.00 0.00 0.00 3.85
149 150 1.677217 GCTCTGTTGATCACCCTGACC 60.677 57.143 0.00 0.00 0.00 4.02
150 151 1.277557 AGCTCTGTTGATCACCCTGAC 59.722 52.381 0.00 0.00 0.00 3.51
151 152 1.552337 GAGCTCTGTTGATCACCCTGA 59.448 52.381 6.43 0.00 0.00 3.86
152 153 1.277273 TGAGCTCTGTTGATCACCCTG 59.723 52.381 16.19 0.00 0.00 4.45
153 154 1.649321 TGAGCTCTGTTGATCACCCT 58.351 50.000 16.19 0.00 0.00 4.34
154 155 2.479566 TTGAGCTCTGTTGATCACCC 57.520 50.000 16.19 0.00 31.72 4.61
155 156 3.364366 CGTTTTGAGCTCTGTTGATCACC 60.364 47.826 16.19 0.00 31.72 4.02
156 157 3.494626 TCGTTTTGAGCTCTGTTGATCAC 59.505 43.478 16.19 0.00 31.72 3.06
157 158 3.727726 TCGTTTTGAGCTCTGTTGATCA 58.272 40.909 16.19 0.00 0.00 2.92
158 159 4.319235 CTCGTTTTGAGCTCTGTTGATC 57.681 45.455 16.19 0.00 38.03 2.92
169 170 2.799085 GGTGAGCCAGCTCGTTTTGAG 61.799 57.143 14.57 0.00 45.48 3.02
170 171 0.884704 GGTGAGCCAGCTCGTTTTGA 60.885 55.000 14.57 0.00 45.48 2.69
171 172 1.165907 TGGTGAGCCAGCTCGTTTTG 61.166 55.000 14.57 0.00 45.48 2.44
172 173 1.148273 TGGTGAGCCAGCTCGTTTT 59.852 52.632 14.57 0.00 45.48 2.43
173 174 2.828868 TGGTGAGCCAGCTCGTTT 59.171 55.556 14.57 0.00 45.48 3.60
181 182 1.676635 GCTGCAATCTGGTGAGCCA 60.677 57.895 0.00 0.00 43.73 4.75
182 183 2.413142 GGCTGCAATCTGGTGAGCC 61.413 63.158 0.50 0.00 42.37 4.70
183 184 1.676635 TGGCTGCAATCTGGTGAGC 60.677 57.895 0.50 0.00 0.00 4.26
184 185 0.607217 TGTGGCTGCAATCTGGTGAG 60.607 55.000 0.50 0.00 0.00 3.51
185 186 0.178995 TTGTGGCTGCAATCTGGTGA 60.179 50.000 0.50 0.00 0.00 4.02
186 187 0.038892 GTTGTGGCTGCAATCTGGTG 60.039 55.000 0.50 0.00 0.00 4.17
187 188 0.467844 TGTTGTGGCTGCAATCTGGT 60.468 50.000 0.50 0.00 0.00 4.00
188 189 0.675083 TTGTTGTGGCTGCAATCTGG 59.325 50.000 0.50 0.00 0.00 3.86
189 190 1.336517 CCTTGTTGTGGCTGCAATCTG 60.337 52.381 0.50 0.00 0.00 2.90
190 191 0.963962 CCTTGTTGTGGCTGCAATCT 59.036 50.000 0.50 0.00 0.00 2.40
191 192 0.037975 CCCTTGTTGTGGCTGCAATC 60.038 55.000 0.50 0.00 0.00 2.67
192 193 2.051941 CCCTTGTTGTGGCTGCAAT 58.948 52.632 0.50 0.00 0.00 3.56
193 194 2.795110 GCCCTTGTTGTGGCTGCAA 61.795 57.895 0.50 0.00 44.46 4.08
194 195 3.225798 GCCCTTGTTGTGGCTGCA 61.226 61.111 0.50 0.00 44.46 4.41
199 200 1.475280 CATCTGATGCCCTTGTTGTGG 59.525 52.381 4.47 0.00 0.00 4.17
200 201 2.163010 GTCATCTGATGCCCTTGTTGTG 59.837 50.000 12.78 0.00 0.00 3.33
201 202 2.440409 GTCATCTGATGCCCTTGTTGT 58.560 47.619 12.78 0.00 0.00 3.32
202 203 1.747355 GGTCATCTGATGCCCTTGTTG 59.253 52.381 10.35 0.00 0.00 3.33
203 204 1.355381 TGGTCATCTGATGCCCTTGTT 59.645 47.619 17.64 0.00 0.00 2.83
204 205 0.994247 TGGTCATCTGATGCCCTTGT 59.006 50.000 17.64 0.00 0.00 3.16
205 206 1.340308 TGTGGTCATCTGATGCCCTTG 60.340 52.381 17.64 0.00 0.00 3.61
206 207 0.994247 TGTGGTCATCTGATGCCCTT 59.006 50.000 17.64 0.00 0.00 3.95
207 208 0.994247 TTGTGGTCATCTGATGCCCT 59.006 50.000 17.64 0.00 0.00 5.19
208 209 1.747355 CTTTGTGGTCATCTGATGCCC 59.253 52.381 20.74 16.76 0.00 5.36
209 210 2.163010 CACTTTGTGGTCATCTGATGCC 59.837 50.000 12.78 16.11 0.00 4.40
210 211 3.482722 CACTTTGTGGTCATCTGATGC 57.517 47.619 12.78 7.95 0.00 3.91
222 223 0.466189 ACTCCTGCCACCACTTTGTG 60.466 55.000 0.00 0.00 35.98 3.33
223 224 0.466189 CACTCCTGCCACCACTTTGT 60.466 55.000 0.00 0.00 0.00 2.83
224 225 1.799258 GCACTCCTGCCACCACTTTG 61.799 60.000 0.00 0.00 37.45 2.77
225 226 1.529244 GCACTCCTGCCACCACTTT 60.529 57.895 0.00 0.00 37.45 2.66
226 227 2.072874 ATGCACTCCTGCCACCACTT 62.073 55.000 0.00 0.00 43.51 3.16
227 228 2.532532 ATGCACTCCTGCCACCACT 61.533 57.895 0.00 0.00 43.51 4.00
228 229 2.034687 ATGCACTCCTGCCACCAC 59.965 61.111 0.00 0.00 43.51 4.16
229 230 1.855441 ATCATGCACTCCTGCCACCA 61.855 55.000 0.00 0.00 43.51 4.17
230 231 0.682209 AATCATGCACTCCTGCCACC 60.682 55.000 0.00 0.00 43.51 4.61
231 232 0.737219 GAATCATGCACTCCTGCCAC 59.263 55.000 0.00 0.00 43.51 5.01
232 233 0.328926 TGAATCATGCACTCCTGCCA 59.671 50.000 0.00 0.00 43.51 4.92
233 234 1.022735 CTGAATCATGCACTCCTGCC 58.977 55.000 0.00 0.00 43.51 4.85
234 235 1.400846 CACTGAATCATGCACTCCTGC 59.599 52.381 0.00 0.00 44.52 4.85
235 236 2.937149 CTCACTGAATCATGCACTCCTG 59.063 50.000 0.00 0.00 0.00 3.86
236 237 2.093075 CCTCACTGAATCATGCACTCCT 60.093 50.000 0.00 0.00 0.00 3.69
237 238 2.286872 CCTCACTGAATCATGCACTCC 58.713 52.381 0.00 0.00 0.00 3.85
238 239 1.669779 GCCTCACTGAATCATGCACTC 59.330 52.381 0.00 0.00 0.00 3.51
239 240 1.003928 TGCCTCACTGAATCATGCACT 59.996 47.619 0.00 0.00 0.00 4.40
240 241 1.456296 TGCCTCACTGAATCATGCAC 58.544 50.000 0.00 0.00 0.00 4.57
241 242 1.814394 GTTGCCTCACTGAATCATGCA 59.186 47.619 0.00 0.00 0.00 3.96
242 243 1.814394 TGTTGCCTCACTGAATCATGC 59.186 47.619 0.00 0.00 0.00 4.06
243 244 3.340928 TCTGTTGCCTCACTGAATCATG 58.659 45.455 0.00 0.00 0.00 3.07
244 245 3.708403 TCTGTTGCCTCACTGAATCAT 57.292 42.857 0.00 0.00 0.00 2.45
245 246 3.340928 CATCTGTTGCCTCACTGAATCA 58.659 45.455 0.00 0.00 0.00 2.57
246 247 2.681848 CCATCTGTTGCCTCACTGAATC 59.318 50.000 0.00 0.00 0.00 2.52
247 248 2.040813 ACCATCTGTTGCCTCACTGAAT 59.959 45.455 0.00 0.00 0.00 2.57
248 249 1.421268 ACCATCTGTTGCCTCACTGAA 59.579 47.619 0.00 0.00 0.00 3.02
249 250 1.002430 GACCATCTGTTGCCTCACTGA 59.998 52.381 0.00 0.00 0.00 3.41
250 251 1.271001 TGACCATCTGTTGCCTCACTG 60.271 52.381 0.00 0.00 0.00 3.66
251 252 1.059098 TGACCATCTGTTGCCTCACT 58.941 50.000 0.00 0.00 0.00 3.41
252 253 1.808945 CTTGACCATCTGTTGCCTCAC 59.191 52.381 0.00 0.00 0.00 3.51
253 254 1.271543 CCTTGACCATCTGTTGCCTCA 60.272 52.381 0.00 0.00 0.00 3.86
254 255 1.003580 TCCTTGACCATCTGTTGCCTC 59.996 52.381 0.00 0.00 0.00 4.70
255 256 1.004044 CTCCTTGACCATCTGTTGCCT 59.996 52.381 0.00 0.00 0.00 4.75
256 257 1.271597 ACTCCTTGACCATCTGTTGCC 60.272 52.381 0.00 0.00 0.00 4.52
257 258 2.191128 ACTCCTTGACCATCTGTTGC 57.809 50.000 0.00 0.00 0.00 4.17
258 259 6.227298 AGTATACTCCTTGACCATCTGTTG 57.773 41.667 0.00 0.00 0.00 3.33
259 260 7.349412 GTAGTATACTCCTTGACCATCTGTT 57.651 40.000 9.12 0.00 38.91 3.16
260 261 6.963083 GTAGTATACTCCTTGACCATCTGT 57.037 41.667 9.12 0.00 38.91 3.41
277 278 9.929180 CATACACTTATGCAATGGTAGTAGTAT 57.071 33.333 0.00 0.00 0.00 2.12
350 351 7.981102 AGCTCCCTCCGTTTTATAATATTTC 57.019 36.000 0.00 0.00 0.00 2.17
381 385 3.312697 GTGTCACTCCAGTTGTCCTTTTC 59.687 47.826 0.00 0.00 0.00 2.29
463 474 1.170290 CGGAACCCCTTTTGCTCGTT 61.170 55.000 0.00 0.00 0.00 3.85
606 621 0.687757 AGAGGGAAGCAGCATCCGTA 60.688 55.000 11.75 0.00 37.87 4.02
638 654 1.822371 CGACGGGATTGGGGAATTTTT 59.178 47.619 0.00 0.00 0.00 1.94
651 667 3.691342 CTGGCCTTGTCGACGGGA 61.691 66.667 25.14 8.41 0.00 5.14
692 708 5.242838 AGAGAATACGGATGGATTCAGAGAC 59.757 44.000 3.28 0.00 35.00 3.36
717 733 1.853963 TCGGAGAGGAGGGAAGAAAG 58.146 55.000 0.00 0.00 0.00 2.62
744 760 2.202676 CCGCAGAGAGTTCGCTCC 60.203 66.667 0.32 0.00 45.16 4.70
749 765 2.171341 AAGAAACCCGCAGAGAGTTC 57.829 50.000 0.00 0.00 0.00 3.01
750 766 2.640316 AAAGAAACCCGCAGAGAGTT 57.360 45.000 0.00 0.00 0.00 3.01
751 767 2.495084 GAAAAGAAACCCGCAGAGAGT 58.505 47.619 0.00 0.00 0.00 3.24
754 770 0.110192 GCGAAAAGAAACCCGCAGAG 60.110 55.000 0.00 0.00 46.04 3.35
755 771 1.946267 GCGAAAAGAAACCCGCAGA 59.054 52.632 0.00 0.00 46.04 4.26
759 775 0.096454 GATCGGCGAAAAGAAACCCG 59.904 55.000 15.93 0.00 40.25 5.28
760 776 0.096454 CGATCGGCGAAAAGAAACCC 59.904 55.000 15.93 0.00 44.57 4.11
786 835 1.343782 TGCCCATAATGCCCCAAATCA 60.344 47.619 0.00 0.00 0.00 2.57
840 889 1.076777 AGCAATCCACCCAATCCCG 60.077 57.895 0.00 0.00 0.00 5.14
986 1043 4.885426 ACATGATGGATGTCGCCC 57.115 55.556 0.00 0.00 41.91 6.13
1011 1068 2.954318 AGCCGGATCCAAATTCTTCATG 59.046 45.455 13.41 0.00 0.00 3.07
1307 1441 2.616001 GGGGTACGACTTGTGGCAATTA 60.616 50.000 0.00 0.00 0.00 1.40
1322 1456 3.085947 GGAACGGGGAGGGGGTAC 61.086 72.222 0.00 0.00 0.00 3.34
1335 1469 9.356433 GAAAGAACTACTAGTATGACTTGGAAC 57.644 37.037 2.33 0.85 0.00 3.62
1394 1543 5.062308 GTCTTCTAGTTCATGTTTGCTACCG 59.938 44.000 0.00 0.00 0.00 4.02
1395 1544 5.351740 GGTCTTCTAGTTCATGTTTGCTACC 59.648 44.000 0.00 0.00 0.00 3.18
1396 1545 6.166982 AGGTCTTCTAGTTCATGTTTGCTAC 58.833 40.000 0.00 0.00 0.00 3.58
1503 1658 9.578439 GAAAAGCTTGAGCATCTTTGTATAAAT 57.422 29.630 0.00 0.00 45.16 1.40
1552 1707 9.944376 TTCCAATATAGTGTATCTAGCCATTTC 57.056 33.333 0.00 0.00 31.67 2.17
1877 2034 4.819769 ACGAAAAATGCCTGCATAACAAT 58.180 34.783 4.84 0.00 35.31 2.71
2125 2282 4.564041 TGGTTCCGTAAGCAATAACGTAA 58.436 39.130 0.00 0.00 40.03 3.18
2127 2284 3.042871 TGGTTCCGTAAGCAATAACGT 57.957 42.857 0.00 0.00 40.03 3.99
2143 2301 0.323451 GAGGGCGGGATCTTTTGGTT 60.323 55.000 0.00 0.00 0.00 3.67
2562 2734 0.167470 CATGCTTTCCTCTGCACACG 59.833 55.000 0.00 0.00 42.26 4.49
2889 3061 7.870954 ACTTGTCAGATCTTGTAAACGTGATTA 59.129 33.333 0.00 0.00 0.00 1.75
3459 3641 8.192110 TGTTCCCACTTAGTGAAAATTTTACAC 58.808 33.333 14.66 18.14 35.23 2.90
3489 3674 1.486145 CCCCTACAACCGGGTCACTT 61.486 60.000 6.32 0.00 40.24 3.16
4446 4805 0.257328 TTTGTTGGAGGGTGAGCACA 59.743 50.000 2.75 0.00 0.00 4.57
4826 5186 3.368236 CAGGAAACGACTAGCAGCTTAAC 59.632 47.826 0.00 0.00 0.00 2.01
5636 6005 6.486253 TCAGATACTGAATTTGCAACTGAC 57.514 37.500 0.00 0.00 37.57 3.51
5685 6078 5.258456 ACAAGAGCTCATTTTATGCCATG 57.742 39.130 17.77 0.00 0.00 3.66
5714 6107 8.846943 TGGCAATTGGAGTACATATACTAATG 57.153 34.615 7.72 0.00 41.98 1.90
5727 6121 3.903090 TCCTTTTTCATGGCAATTGGAGT 59.097 39.130 7.72 0.00 0.00 3.85
5755 6149 1.629043 TACTCTCGTGGGCACTTCTT 58.371 50.000 0.00 0.00 0.00 2.52
5872 6272 2.666596 GATAGCAAGGAGGGCGGTGG 62.667 65.000 0.00 0.00 36.08 4.61
5954 6354 9.965824 ATTAAAAGATAAACAAATGGATAGCCG 57.034 29.630 0.00 0.00 36.79 5.52
6431 6835 8.661257 CCAAACAAATATGTACGAGTGACAATA 58.339 33.333 0.00 0.00 39.40 1.90
6792 7197 6.047870 ACTGCAATTAATTTCACAACAAGCA 58.952 32.000 0.00 1.31 0.00 3.91
7121 7526 5.018809 ACTTCAGCACCAATATCCACAAAT 58.981 37.500 0.00 0.00 0.00 2.32
7126 7531 3.346315 CACACTTCAGCACCAATATCCA 58.654 45.455 0.00 0.00 0.00 3.41
7451 7937 3.615496 CCCAGTTCGTACACCTTATTTCG 59.385 47.826 0.00 0.00 0.00 3.46
7461 7947 5.336690 GGACTATTGTTACCCAGTTCGTACA 60.337 44.000 0.00 0.00 0.00 2.90
7540 8026 9.607285 CATACATGACCAAAAGTAAAACTGTAC 57.393 33.333 0.00 0.00 0.00 2.90
7654 8140 3.433274 CGCAGAGTAGAGATGTTTTGCAA 59.567 43.478 0.00 0.00 0.00 4.08
7675 8161 1.843753 GCGTTTTGGTTTCTGACAACG 59.156 47.619 0.00 0.00 37.88 4.10
7875 8361 4.380550 CCGGTTGATTTAGGGAAAAGCTTC 60.381 45.833 0.00 0.00 34.50 3.86
8105 8591 2.158900 CGCCATCTTCCTCCTGTATTGT 60.159 50.000 0.00 0.00 0.00 2.71
8233 8719 2.732412 ACAGTTCATCAGTCACCTCG 57.268 50.000 0.00 0.00 0.00 4.63
8357 8843 2.158475 TGTCCTTCTCATGGCCAACTTT 60.158 45.455 10.96 0.00 0.00 2.66
8365 8851 1.066573 AGAACGCTGTCCTTCTCATGG 60.067 52.381 0.00 0.00 0.00 3.66
8371 8857 1.727335 GCTTGTAGAACGCTGTCCTTC 59.273 52.381 0.00 0.00 0.00 3.46
8494 8980 5.012561 AGCAGAGCCTAGGAAAATAATCGAT 59.987 40.000 14.75 0.00 0.00 3.59
8497 8983 6.295249 AGAAGCAGAGCCTAGGAAAATAATC 58.705 40.000 14.75 2.66 0.00 1.75
8501 8987 4.522114 GAAGAAGCAGAGCCTAGGAAAAT 58.478 43.478 14.75 0.00 0.00 1.82
8540 9029 4.040461 TCAGTAGAGAAAAACACCCCTCAG 59.960 45.833 0.00 0.00 0.00 3.35
8587 9081 2.983592 AAAAACGCCGAGCCCCAG 60.984 61.111 0.00 0.00 0.00 4.45
8672 9170 1.066143 ACCAGGCTACAACTCATTCCG 60.066 52.381 0.00 0.00 0.00 4.30
8674 9173 1.740025 GCACCAGGCTACAACTCATTC 59.260 52.381 0.00 0.00 40.25 2.67
8695 9224 0.033504 TTCGCACCTGAACCTCTGAC 59.966 55.000 0.00 0.00 0.00 3.51
8697 9226 0.868406 GTTTCGCACCTGAACCTCTG 59.132 55.000 0.00 0.00 0.00 3.35
8700 9229 1.308998 CTTGTTTCGCACCTGAACCT 58.691 50.000 0.00 0.00 0.00 3.50
8701 9230 0.310854 CCTTGTTTCGCACCTGAACC 59.689 55.000 0.00 0.00 0.00 3.62
8702 9231 0.310854 CCCTTGTTTCGCACCTGAAC 59.689 55.000 0.00 0.00 0.00 3.18
8703 9232 1.452145 GCCCTTGTTTCGCACCTGAA 61.452 55.000 0.00 0.00 0.00 3.02
8704 9233 1.896660 GCCCTTGTTTCGCACCTGA 60.897 57.895 0.00 0.00 0.00 3.86
8705 9234 2.644992 GCCCTTGTTTCGCACCTG 59.355 61.111 0.00 0.00 0.00 4.00
8706 9235 2.978010 CGCCCTTGTTTCGCACCT 60.978 61.111 0.00 0.00 0.00 4.00
8711 9240 0.109919 GTTTAGGCGCCCTTGTTTCG 60.110 55.000 26.15 0.00 34.61 3.46
8712 9241 0.955905 TGTTTAGGCGCCCTTGTTTC 59.044 50.000 26.15 8.18 34.61 2.78
8713 9242 1.627864 ATGTTTAGGCGCCCTTGTTT 58.372 45.000 26.15 5.68 34.61 2.83
8714 9243 2.500392 TATGTTTAGGCGCCCTTGTT 57.500 45.000 26.15 6.59 34.61 2.83
8715 9244 2.297701 CATATGTTTAGGCGCCCTTGT 58.702 47.619 26.15 7.06 34.61 3.16
8716 9245 2.297701 ACATATGTTTAGGCGCCCTTG 58.702 47.619 26.15 11.53 34.61 3.61
8717 9246 2.729028 ACATATGTTTAGGCGCCCTT 57.271 45.000 26.15 8.44 34.61 3.95
8718 9247 2.436542 TGTACATATGTTTAGGCGCCCT 59.563 45.455 26.15 13.52 37.71 5.19
8719 9248 2.806244 CTGTACATATGTTTAGGCGCCC 59.194 50.000 26.15 8.39 0.00 6.13
8720 9249 2.223377 GCTGTACATATGTTTAGGCGCC 59.777 50.000 21.89 21.89 0.00 6.53
8721 9250 2.869801 TGCTGTACATATGTTTAGGCGC 59.130 45.455 14.77 0.00 0.00 6.53
8722 9251 4.209288 GTCTGCTGTACATATGTTTAGGCG 59.791 45.833 14.77 9.81 0.00 5.52
8723 9252 5.235186 CAGTCTGCTGTACATATGTTTAGGC 59.765 44.000 14.77 13.37 37.92 3.93
8724 9253 6.834959 CAGTCTGCTGTACATATGTTTAGG 57.165 41.667 14.77 3.83 37.92 2.69
8797 9328 1.967319 CAGCTACCCACGCCATAAAT 58.033 50.000 0.00 0.00 0.00 1.40
8803 9334 2.602746 TAATGGCAGCTACCCACGCC 62.603 60.000 7.39 5.53 45.11 5.68
8824 9355 4.322273 GGATACATTCTCGCTGATGGATGA 60.322 45.833 0.00 0.00 0.00 2.92
8825 9356 3.931468 GGATACATTCTCGCTGATGGATG 59.069 47.826 0.00 0.00 0.00 3.51
8826 9357 3.580022 TGGATACATTCTCGCTGATGGAT 59.420 43.478 0.00 0.00 46.17 3.41
8827 9358 2.965147 TGGATACATTCTCGCTGATGGA 59.035 45.455 0.00 0.00 46.17 3.41
8828 9359 3.391506 TGGATACATTCTCGCTGATGG 57.608 47.619 0.00 0.00 46.17 3.51
8842 9373 5.403766 CAGATGCAACGAGAATACTGGATAC 59.596 44.000 0.00 0.00 0.00 2.24
8843 9374 5.301805 TCAGATGCAACGAGAATACTGGATA 59.698 40.000 0.00 0.00 0.00 2.59
8844 9375 4.100035 TCAGATGCAACGAGAATACTGGAT 59.900 41.667 0.00 0.00 0.00 3.41
8845 9376 3.447229 TCAGATGCAACGAGAATACTGGA 59.553 43.478 0.00 0.00 0.00 3.86
8846 9377 3.785486 TCAGATGCAACGAGAATACTGG 58.215 45.455 0.00 0.00 0.00 4.00
8847 9378 5.980698 ATTCAGATGCAACGAGAATACTG 57.019 39.130 13.29 0.00 0.00 2.74
8848 9379 6.648310 CCATATTCAGATGCAACGAGAATACT 59.352 38.462 19.35 10.99 34.95 2.12
8849 9380 6.128445 CCCATATTCAGATGCAACGAGAATAC 60.128 42.308 19.35 0.00 34.95 1.89
8850 9381 5.934043 CCCATATTCAGATGCAACGAGAATA 59.066 40.000 19.29 19.29 36.12 1.75
8851 9382 4.758674 CCCATATTCAGATGCAACGAGAAT 59.241 41.667 17.10 17.10 33.82 2.40
8852 9383 4.129380 CCCATATTCAGATGCAACGAGAA 58.871 43.478 7.20 7.20 0.00 2.87
8853 9384 3.134623 ACCCATATTCAGATGCAACGAGA 59.865 43.478 0.00 0.00 0.00 4.04
8854 9385 3.470709 ACCCATATTCAGATGCAACGAG 58.529 45.455 0.00 0.00 0.00 4.18
8855 9386 3.558931 ACCCATATTCAGATGCAACGA 57.441 42.857 0.00 0.00 0.00 3.85
8856 9387 4.024048 GGTAACCCATATTCAGATGCAACG 60.024 45.833 0.00 0.00 0.00 4.10
8857 9388 4.887071 TGGTAACCCATATTCAGATGCAAC 59.113 41.667 0.00 0.00 35.17 4.17
8858 9389 4.887071 GTGGTAACCCATATTCAGATGCAA 59.113 41.667 0.00 0.00 44.35 4.08
8859 9390 4.165950 AGTGGTAACCCATATTCAGATGCA 59.834 41.667 0.00 0.00 44.35 3.96
8860 9391 4.516698 CAGTGGTAACCCATATTCAGATGC 59.483 45.833 0.00 0.00 44.35 3.91
8861 9392 4.516698 GCAGTGGTAACCCATATTCAGATG 59.483 45.833 0.00 0.00 44.35 2.90
8862 9393 4.413520 AGCAGTGGTAACCCATATTCAGAT 59.586 41.667 0.00 0.00 44.35 2.90
8863 9394 3.780294 AGCAGTGGTAACCCATATTCAGA 59.220 43.478 0.00 0.00 44.35 3.27
8864 9395 3.879295 CAGCAGTGGTAACCCATATTCAG 59.121 47.826 0.00 0.00 44.35 3.02
8865 9396 3.884895 CAGCAGTGGTAACCCATATTCA 58.115 45.455 0.00 0.00 44.35 2.57
8866 9397 2.618709 GCAGCAGTGGTAACCCATATTC 59.381 50.000 0.00 0.00 44.35 1.75
8867 9398 2.025416 TGCAGCAGTGGTAACCCATATT 60.025 45.455 0.00 0.00 44.35 1.28
8868 9399 1.563879 TGCAGCAGTGGTAACCCATAT 59.436 47.619 0.00 0.00 44.35 1.78
8874 9405 1.466167 CACAGATGCAGCAGTGGTAAC 59.534 52.381 18.63 0.00 0.00 2.50
8876 9407 0.036105 CCACAGATGCAGCAGTGGTA 60.036 55.000 31.60 0.00 44.95 3.25
8879 9410 1.241990 AAGCCACAGATGCAGCAGTG 61.242 55.000 19.34 19.34 0.00 3.66
8880 9411 0.538977 AAAGCCACAGATGCAGCAGT 60.539 50.000 4.07 0.00 0.00 4.40
8886 9417 0.244721 GACCCAAAAGCCACAGATGC 59.755 55.000 0.00 0.00 0.00 3.91
8896 9427 0.887933 CCCATCCAACGACCCAAAAG 59.112 55.000 0.00 0.00 0.00 2.27
8913 9444 2.159379 GCATCTTGTCCATCGTTTTCCC 60.159 50.000 0.00 0.00 0.00 3.97
8932 9463 9.448438 ACATAGTGATTACTTCTAAAATGTGCA 57.552 29.630 0.00 0.00 38.36 4.57
8945 9476 8.893727 GGCTTTGACAAATACATAGTGATTACT 58.106 33.333 0.05 0.00 40.99 2.24
8946 9477 8.673711 TGGCTTTGACAAATACATAGTGATTAC 58.326 33.333 0.05 0.00 0.00 1.89
8947 9478 8.800370 TGGCTTTGACAAATACATAGTGATTA 57.200 30.769 0.05 0.00 0.00 1.75
8948 9479 7.701539 TGGCTTTGACAAATACATAGTGATT 57.298 32.000 0.05 0.00 0.00 2.57
8949 9480 7.701539 TTGGCTTTGACAAATACATAGTGAT 57.298 32.000 0.05 0.00 0.00 3.06
8950 9481 7.148086 GGATTGGCTTTGACAAATACATAGTGA 60.148 37.037 0.05 0.00 32.77 3.41
8951 9482 6.974622 GGATTGGCTTTGACAAATACATAGTG 59.025 38.462 0.05 0.00 32.77 2.74
8962 9558 0.537143 AGCACGGATTGGCTTTGACA 60.537 50.000 0.00 0.00 36.92 3.58
8963 9559 0.169009 GAGCACGGATTGGCTTTGAC 59.831 55.000 0.00 0.00 41.22 3.18
8976 9572 3.257561 CTGCGGAATCGGAGCACG 61.258 66.667 0.00 0.00 46.89 5.34
8988 9584 3.980775 CCAAAACAATGAAACTACTGCGG 59.019 43.478 0.00 0.00 0.00 5.69
8990 9586 5.348164 ACACCAAAACAATGAAACTACTGC 58.652 37.500 0.00 0.00 0.00 4.40
8991 9587 7.543868 TGAAACACCAAAACAATGAAACTACTG 59.456 33.333 0.00 0.00 0.00 2.74
8992 9588 7.607250 TGAAACACCAAAACAATGAAACTACT 58.393 30.769 0.00 0.00 0.00 2.57
8993 9589 7.820044 TGAAACACCAAAACAATGAAACTAC 57.180 32.000 0.00 0.00 0.00 2.73
8994 9590 8.091449 ACTTGAAACACCAAAACAATGAAACTA 58.909 29.630 0.00 0.00 0.00 2.24
8995 9591 6.934083 ACTTGAAACACCAAAACAATGAAACT 59.066 30.769 0.00 0.00 0.00 2.66
8996 9592 7.127917 ACTTGAAACACCAAAACAATGAAAC 57.872 32.000 0.00 0.00 0.00 2.78
8997 9593 7.736447 AACTTGAAACACCAAAACAATGAAA 57.264 28.000 0.00 0.00 0.00 2.69
9000 9596 7.117523 TGAGAAACTTGAAACACCAAAACAATG 59.882 33.333 0.00 0.00 0.00 2.82
9001 9597 7.158021 TGAGAAACTTGAAACACCAAAACAAT 58.842 30.769 0.00 0.00 0.00 2.71
9002 9598 6.516718 TGAGAAACTTGAAACACCAAAACAA 58.483 32.000 0.00 0.00 0.00 2.83
9004 9600 6.589907 ACATGAGAAACTTGAAACACCAAAAC 59.410 34.615 0.00 0.00 0.00 2.43
9005 9601 6.589523 CACATGAGAAACTTGAAACACCAAAA 59.410 34.615 0.00 0.00 0.00 2.44
9008 9604 4.439974 GCACATGAGAAACTTGAAACACCA 60.440 41.667 0.00 0.00 0.00 4.17
9009 9605 4.044426 GCACATGAGAAACTTGAAACACC 58.956 43.478 0.00 0.00 0.00 4.16
9022 9622 5.471556 AAATTGAAATGTGGCACATGAGA 57.528 34.783 31.99 18.66 44.52 3.27
9029 9629 4.391216 CCGCAATTAAATTGAAATGTGGCA 59.609 37.500 9.78 0.00 42.83 4.92
9030 9630 4.391523 ACCGCAATTAAATTGAAATGTGGC 59.608 37.500 19.34 8.39 42.83 5.01
9032 9632 8.066595 TGAAAACCGCAATTAAATTGAAATGTG 58.933 29.630 0.00 0.00 42.83 3.21
9047 9647 5.171476 TCATTCTTTTTGTGAAAACCGCAA 58.829 33.333 0.00 0.00 42.92 4.85
9114 9714 4.630940 GGGACGTACAATGAATAACGGAAA 59.369 41.667 0.00 0.00 39.57 3.13
9118 9718 5.047847 AGATGGGACGTACAATGAATAACG 58.952 41.667 0.00 0.00 40.99 3.18
9150 9750 9.959721 AACCTCAGCTAAATCTCAGTTAATAAA 57.040 29.630 0.00 0.00 0.00 1.40
9154 9754 7.450074 TGAAACCTCAGCTAAATCTCAGTTAA 58.550 34.615 0.00 0.00 0.00 2.01
9155 9755 7.004555 TGAAACCTCAGCTAAATCTCAGTTA 57.995 36.000 0.00 0.00 0.00 2.24
9156 9756 5.869579 TGAAACCTCAGCTAAATCTCAGTT 58.130 37.500 0.00 0.00 0.00 3.16
9187 9788 8.391106 CAATGAATAGTTGTAACCTCACTTAGC 58.609 37.037 0.00 0.00 0.00 3.09
9188 9789 9.436957 ACAATGAATAGTTGTAACCTCACTTAG 57.563 33.333 0.00 0.00 37.98 2.18
9198 9799 7.094377 GGGAGAAAGCACAATGAATAGTTGTAA 60.094 37.037 0.00 0.00 37.69 2.41
9200 9802 5.183904 GGGAGAAAGCACAATGAATAGTTGT 59.816 40.000 0.00 0.00 40.23 3.32
9283 9888 7.442666 ACTTTCTGTCAAACTTCATCTTAGACC 59.557 37.037 0.00 0.00 0.00 3.85
9295 9900 5.878669 AGTTTTACCGACTTTCTGTCAAACT 59.121 36.000 4.96 4.96 45.60 2.66
9308 9913 4.619437 TTGTGGTTTGAGTTTTACCGAC 57.381 40.909 0.00 0.00 34.62 4.79
9347 9952 7.467811 GCTTGATGATTTCTCAATTCCATACGT 60.468 37.037 0.00 0.00 34.37 3.57
9349 9954 7.709947 TGCTTGATGATTTCTCAATTCCATAC 58.290 34.615 0.00 0.00 34.37 2.39
9354 9959 7.061905 CACTGTTGCTTGATGATTTCTCAATTC 59.938 37.037 0.00 0.00 34.37 2.17
9356 9961 6.387465 CACTGTTGCTTGATGATTTCTCAAT 58.613 36.000 0.00 0.00 34.37 2.57
9357 9962 5.278610 CCACTGTTGCTTGATGATTTCTCAA 60.279 40.000 0.00 0.00 34.37 3.02
9358 9963 4.216902 CCACTGTTGCTTGATGATTTCTCA 59.783 41.667 0.00 0.00 35.41 3.27
9376 9981 2.752354 TGTGTTTCACCAAGTTCCACTG 59.248 45.455 0.00 0.00 32.73 3.66
9377 9982 3.080300 TGTGTTTCACCAAGTTCCACT 57.920 42.857 0.00 0.00 32.73 4.00
9378 9983 3.859411 TTGTGTTTCACCAAGTTCCAC 57.141 42.857 0.00 0.00 32.73 4.02
9381 9986 6.959671 TTCAAATTGTGTTTCACCAAGTTC 57.040 33.333 0.00 0.00 32.73 3.01
9387 9992 5.415221 TGGAGTTTCAAATTGTGTTTCACC 58.585 37.500 0.00 0.00 32.73 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.