Multiple sequence alignment - TraesCS2D01G431100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G431100 chr2D 100.000 3128 0 0 1 3128 543532944 543529817 0.000000e+00 5777
1 TraesCS2D01G431100 chr2D 94.321 1620 48 21 713 2314 543813861 543812268 0.000000e+00 2442
2 TraesCS2D01G431100 chr2D 93.648 1653 46 26 668 2314 543762164 543760565 0.000000e+00 2416
3 TraesCS2D01G431100 chr2D 89.153 1770 97 39 516 2256 543589481 543587778 0.000000e+00 2117
4 TraesCS2D01G431100 chr2D 90.741 270 21 4 250 518 558801357 558801623 1.070000e-94 357
5 TraesCS2D01G431100 chr2D 90.441 272 22 4 245 514 155801791 155802060 3.840000e-94 355
6 TraesCS2D01G431100 chr2D 89.340 197 9 5 649 840 543815219 543815030 1.450000e-58 237
7 TraesCS2D01G431100 chr2B 94.321 1620 74 13 525 2137 649371051 649369443 0.000000e+00 2466
8 TraesCS2D01G431100 chr2B 90.314 1497 103 16 827 2311 648931586 648930120 0.000000e+00 1923
9 TraesCS2D01G431100 chr2B 85.806 465 29 14 1882 2325 649192246 649191798 2.840000e-125 459
10 TraesCS2D01G431100 chr2B 76.923 676 148 7 2456 3128 726589664 726588994 8.190000e-101 377
11 TraesCS2D01G431100 chr2B 76.479 676 150 8 2456 3128 104961110 104960441 2.970000e-95 359
12 TraesCS2D01G431100 chr2B 90.155 193 18 1 516 708 648935318 648935127 1.860000e-62 250
13 TraesCS2D01G431100 chr2B 85.915 142 14 4 2261 2401 649369226 649369090 2.510000e-31 147
14 TraesCS2D01G431100 chr2A 89.243 1506 110 31 833 2303 686297157 686295669 0.000000e+00 1836
15 TraesCS2D01G431100 chr2A 89.161 1513 105 34 827 2303 686523753 686522264 0.000000e+00 1831
16 TraesCS2D01G431100 chr2A 89.028 1513 113 33 827 2303 686322746 686321251 0.000000e+00 1825
17 TraesCS2D01G431100 chr2A 89.051 1507 115 33 827 2303 686614626 686613140 0.000000e+00 1823
18 TraesCS2D01G431100 chr2A 91.418 268 20 3 252 518 606519323 606519058 6.380000e-97 364
19 TraesCS2D01G431100 chr2A 91.489 188 14 2 516 701 686297398 686297211 1.110000e-64 257
20 TraesCS2D01G431100 chr2A 91.489 188 14 2 516 701 686322981 686322794 1.110000e-64 257
21 TraesCS2D01G431100 chr2A 91.489 188 14 2 516 701 686523988 686523801 1.110000e-64 257
22 TraesCS2D01G431100 chr2A 91.489 188 14 2 516 701 686614861 686614674 1.110000e-64 257
23 TraesCS2D01G431100 chr2A 92.941 170 10 2 516 683 686623591 686623422 2.410000e-61 246
24 TraesCS2D01G431100 chr7A 90.393 687 53 4 2452 3128 714743543 714744226 0.000000e+00 891
25 TraesCS2D01G431100 chr7A 81.416 678 121 3 2452 3128 701117803 701118476 1.640000e-152 549
26 TraesCS2D01G431100 chr7A 91.860 258 17 4 252 508 515222570 515222316 1.070000e-94 357
27 TraesCS2D01G431100 chr3A 90.133 679 62 3 2452 3128 745546426 745547101 0.000000e+00 878
28 TraesCS2D01G431100 chr3B 89.985 679 62 4 2452 3128 544797162 544796488 0.000000e+00 872
29 TraesCS2D01G431100 chr6A 77.612 670 143 6 2453 3120 378066577 378067241 1.750000e-107 399
30 TraesCS2D01G431100 chr6A 91.144 271 21 3 250 519 24080644 24080912 6.380000e-97 364
31 TraesCS2D01G431100 chr1B 76.844 678 150 6 2453 3128 536702695 536703367 2.950000e-100 375
32 TraesCS2D01G431100 chr4B 91.667 264 19 3 251 513 22857618 22857357 2.290000e-96 363
33 TraesCS2D01G431100 chr5D 90.706 269 21 4 251 518 22575149 22575414 3.840000e-94 355
34 TraesCS2D01G431100 chr5D 90.943 265 21 3 251 514 279293132 279292870 1.380000e-93 353
35 TraesCS2D01G431100 chr4A 90.182 275 22 5 241 513 674616783 674617054 1.380000e-93 353
36 TraesCS2D01G431100 chr7B 76.640 625 139 6 2453 3075 272715822 272716441 3.860000e-89 339


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G431100 chr2D 543529817 543532944 3127 True 5777.0 5777 100.0000 1 3128 1 chr2D.!!$R1 3127
1 TraesCS2D01G431100 chr2D 543760565 543762164 1599 True 2416.0 2416 93.6480 668 2314 1 chr2D.!!$R3 1646
2 TraesCS2D01G431100 chr2D 543587778 543589481 1703 True 2117.0 2117 89.1530 516 2256 1 chr2D.!!$R2 1740
3 TraesCS2D01G431100 chr2D 543812268 543815219 2951 True 1339.5 2442 91.8305 649 2314 2 chr2D.!!$R4 1665
4 TraesCS2D01G431100 chr2B 649369090 649371051 1961 True 1306.5 2466 90.1180 525 2401 2 chr2B.!!$R5 1876
5 TraesCS2D01G431100 chr2B 648930120 648935318 5198 True 1086.5 1923 90.2345 516 2311 2 chr2B.!!$R4 1795
6 TraesCS2D01G431100 chr2B 726588994 726589664 670 True 377.0 377 76.9230 2456 3128 1 chr2B.!!$R3 672
7 TraesCS2D01G431100 chr2B 104960441 104961110 669 True 359.0 359 76.4790 2456 3128 1 chr2B.!!$R1 672
8 TraesCS2D01G431100 chr2A 686295669 686297398 1729 True 1046.5 1836 90.3660 516 2303 2 chr2A.!!$R3 1787
9 TraesCS2D01G431100 chr2A 686522264 686523988 1724 True 1044.0 1831 90.3250 516 2303 2 chr2A.!!$R5 1787
10 TraesCS2D01G431100 chr2A 686321251 686322981 1730 True 1041.0 1825 90.2585 516 2303 2 chr2A.!!$R4 1787
11 TraesCS2D01G431100 chr2A 686613140 686614861 1721 True 1040.0 1823 90.2700 516 2303 2 chr2A.!!$R6 1787
12 TraesCS2D01G431100 chr7A 714743543 714744226 683 False 891.0 891 90.3930 2452 3128 1 chr7A.!!$F2 676
13 TraesCS2D01G431100 chr7A 701117803 701118476 673 False 549.0 549 81.4160 2452 3128 1 chr7A.!!$F1 676
14 TraesCS2D01G431100 chr3A 745546426 745547101 675 False 878.0 878 90.1330 2452 3128 1 chr3A.!!$F1 676
15 TraesCS2D01G431100 chr3B 544796488 544797162 674 True 872.0 872 89.9850 2452 3128 1 chr3B.!!$R1 676
16 TraesCS2D01G431100 chr6A 378066577 378067241 664 False 399.0 399 77.6120 2453 3120 1 chr6A.!!$F2 667
17 TraesCS2D01G431100 chr1B 536702695 536703367 672 False 375.0 375 76.8440 2453 3128 1 chr1B.!!$F1 675
18 TraesCS2D01G431100 chr7B 272715822 272716441 619 False 339.0 339 76.6400 2453 3075 1 chr7B.!!$F1 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 137 0.032130 TGACGCTCTTTCGACTTGCT 59.968 50.0 0.00 0.00 0.00 3.91 F
180 181 0.107703 TGCATAAACAGGAGCTCCCG 60.108 55.0 29.54 22.24 40.87 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1970 6789 1.600916 GAGGTGGTGAAGGTGGCAC 60.601 63.158 9.70 9.7 35.56 5.01 R
2156 6987 0.249699 CACGGCCAGTACAACACTCA 60.250 55.000 2.24 0.0 34.26 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.610333 TCCAGATGGTGTGTCTATAGTGT 58.390 43.478 0.00 0.00 36.34 3.55
23 24 4.645136 TCCAGATGGTGTGTCTATAGTGTC 59.355 45.833 0.00 0.00 36.34 3.67
24 25 4.498177 CCAGATGGTGTGTCTATAGTGTCG 60.498 50.000 0.00 0.00 0.00 4.35
25 26 4.096532 CAGATGGTGTGTCTATAGTGTCGT 59.903 45.833 0.00 0.00 0.00 4.34
26 27 4.335874 AGATGGTGTGTCTATAGTGTCGTC 59.664 45.833 0.00 0.00 0.00 4.20
27 28 3.414269 TGGTGTGTCTATAGTGTCGTCA 58.586 45.455 0.00 0.00 0.00 4.35
28 29 3.439129 TGGTGTGTCTATAGTGTCGTCAG 59.561 47.826 0.00 0.00 0.00 3.51
29 30 3.688185 GGTGTGTCTATAGTGTCGTCAGA 59.312 47.826 0.00 0.00 0.00 3.27
30 31 4.201832 GGTGTGTCTATAGTGTCGTCAGAG 60.202 50.000 0.00 0.00 0.00 3.35
31 32 3.939592 TGTGTCTATAGTGTCGTCAGAGG 59.060 47.826 0.00 0.00 0.00 3.69
32 33 3.312973 GTGTCTATAGTGTCGTCAGAGGG 59.687 52.174 0.00 0.00 0.00 4.30
33 34 3.054582 TGTCTATAGTGTCGTCAGAGGGT 60.055 47.826 0.00 0.00 0.00 4.34
34 35 3.312973 GTCTATAGTGTCGTCAGAGGGTG 59.687 52.174 0.00 0.00 0.00 4.61
35 36 2.217510 ATAGTGTCGTCAGAGGGTGT 57.782 50.000 0.00 0.00 0.00 4.16
36 37 1.244816 TAGTGTCGTCAGAGGGTGTG 58.755 55.000 0.00 0.00 0.00 3.82
37 38 0.755698 AGTGTCGTCAGAGGGTGTGT 60.756 55.000 0.00 0.00 0.00 3.72
38 39 0.597637 GTGTCGTCAGAGGGTGTGTG 60.598 60.000 0.00 0.00 0.00 3.82
39 40 1.006102 GTCGTCAGAGGGTGTGTGG 60.006 63.158 0.00 0.00 0.00 4.17
40 41 2.207229 TCGTCAGAGGGTGTGTGGG 61.207 63.158 0.00 0.00 0.00 4.61
41 42 2.750350 GTCAGAGGGTGTGTGGGG 59.250 66.667 0.00 0.00 0.00 4.96
42 43 3.249189 TCAGAGGGTGTGTGGGGC 61.249 66.667 0.00 0.00 0.00 5.80
43 44 4.351054 CAGAGGGTGTGTGGGGCC 62.351 72.222 0.00 0.00 0.00 5.80
44 45 4.918360 AGAGGGTGTGTGGGGCCA 62.918 66.667 4.39 0.00 0.00 5.36
45 46 3.661648 GAGGGTGTGTGGGGCCAT 61.662 66.667 4.39 0.00 0.00 4.40
46 47 2.204228 AGGGTGTGTGGGGCCATA 60.204 61.111 4.39 0.00 0.00 2.74
47 48 2.270874 GAGGGTGTGTGGGGCCATAG 62.271 65.000 4.39 0.00 0.00 2.23
48 49 2.440247 GGTGTGTGGGGCCATAGC 60.440 66.667 4.39 0.00 38.76 2.97
49 50 2.824041 GTGTGTGGGGCCATAGCG 60.824 66.667 4.39 0.00 41.24 4.26
57 58 3.420943 GGCCATAGCGCAACGAAT 58.579 55.556 11.47 0.00 41.24 3.34
58 59 1.279840 GGCCATAGCGCAACGAATC 59.720 57.895 11.47 0.00 41.24 2.52
59 60 1.279840 GCCATAGCGCAACGAATCC 59.720 57.895 11.47 0.00 0.00 3.01
60 61 1.941812 CCATAGCGCAACGAATCCC 59.058 57.895 11.47 0.00 0.00 3.85
61 62 0.532862 CCATAGCGCAACGAATCCCT 60.533 55.000 11.47 0.00 0.00 4.20
62 63 0.583438 CATAGCGCAACGAATCCCTG 59.417 55.000 11.47 0.00 0.00 4.45
63 64 0.464036 ATAGCGCAACGAATCCCTGA 59.536 50.000 11.47 0.00 0.00 3.86
64 65 0.459585 TAGCGCAACGAATCCCTGAC 60.460 55.000 11.47 0.00 0.00 3.51
65 66 2.750888 GCGCAACGAATCCCTGACC 61.751 63.158 0.30 0.00 0.00 4.02
66 67 2.452813 CGCAACGAATCCCTGACCG 61.453 63.158 0.00 0.00 0.00 4.79
67 68 1.375523 GCAACGAATCCCTGACCGT 60.376 57.895 0.00 0.00 36.77 4.83
68 69 1.359459 GCAACGAATCCCTGACCGTC 61.359 60.000 0.00 0.00 33.84 4.79
69 70 0.739813 CAACGAATCCCTGACCGTCC 60.740 60.000 0.00 0.00 33.84 4.79
70 71 1.189524 AACGAATCCCTGACCGTCCA 61.190 55.000 0.00 0.00 33.84 4.02
71 72 1.189524 ACGAATCCCTGACCGTCCAA 61.190 55.000 0.00 0.00 0.00 3.53
72 73 0.178068 CGAATCCCTGACCGTCCAAT 59.822 55.000 0.00 0.00 0.00 3.16
73 74 1.411246 CGAATCCCTGACCGTCCAATA 59.589 52.381 0.00 0.00 0.00 1.90
74 75 2.802057 CGAATCCCTGACCGTCCAATAC 60.802 54.545 0.00 0.00 0.00 1.89
75 76 1.874129 ATCCCTGACCGTCCAATACA 58.126 50.000 0.00 0.00 0.00 2.29
76 77 1.646912 TCCCTGACCGTCCAATACAA 58.353 50.000 0.00 0.00 0.00 2.41
77 78 1.276989 TCCCTGACCGTCCAATACAAC 59.723 52.381 0.00 0.00 0.00 3.32
78 79 1.002659 CCCTGACCGTCCAATACAACA 59.997 52.381 0.00 0.00 0.00 3.33
79 80 2.551287 CCCTGACCGTCCAATACAACAA 60.551 50.000 0.00 0.00 0.00 2.83
80 81 2.742053 CCTGACCGTCCAATACAACAAG 59.258 50.000 0.00 0.00 0.00 3.16
81 82 2.742053 CTGACCGTCCAATACAACAAGG 59.258 50.000 0.00 0.00 0.00 3.61
82 83 1.467342 GACCGTCCAATACAACAAGGC 59.533 52.381 0.00 0.00 0.00 4.35
83 84 0.808755 CCGTCCAATACAACAAGGCC 59.191 55.000 0.00 0.00 0.00 5.19
84 85 1.613255 CCGTCCAATACAACAAGGCCT 60.613 52.381 0.00 0.00 0.00 5.19
85 86 1.468520 CGTCCAATACAACAAGGCCTG 59.531 52.381 5.69 2.82 0.00 4.85
86 87 1.202348 GTCCAATACAACAAGGCCTGC 59.798 52.381 5.69 0.00 0.00 4.85
87 88 1.075374 TCCAATACAACAAGGCCTGCT 59.925 47.619 5.69 0.00 0.00 4.24
88 89 1.474077 CCAATACAACAAGGCCTGCTC 59.526 52.381 5.69 0.00 0.00 4.26
89 90 1.131126 CAATACAACAAGGCCTGCTCG 59.869 52.381 5.69 0.00 0.00 5.03
90 91 0.392998 ATACAACAAGGCCTGCTCGG 60.393 55.000 5.69 0.00 0.00 4.63
99 100 2.032528 CCTGCTCGGCTTTGGTGA 59.967 61.111 0.00 0.00 0.00 4.02
100 101 2.328099 CCTGCTCGGCTTTGGTGAC 61.328 63.158 0.00 0.00 0.00 3.67
101 102 1.597854 CTGCTCGGCTTTGGTGACA 60.598 57.895 0.00 0.00 39.83 3.58
102 103 0.957395 CTGCTCGGCTTTGGTGACAT 60.957 55.000 0.00 0.00 42.32 3.06
103 104 0.323302 TGCTCGGCTTTGGTGACATA 59.677 50.000 0.00 0.00 42.32 2.29
104 105 1.271108 TGCTCGGCTTTGGTGACATAA 60.271 47.619 0.00 0.00 42.32 1.90
105 106 1.810151 GCTCGGCTTTGGTGACATAAA 59.190 47.619 0.00 0.00 42.32 1.40
106 107 2.159517 GCTCGGCTTTGGTGACATAAAG 60.160 50.000 9.55 9.55 42.32 1.85
107 108 2.420022 CTCGGCTTTGGTGACATAAAGG 59.580 50.000 13.65 0.00 42.32 3.11
108 109 2.159382 CGGCTTTGGTGACATAAAGGT 58.841 47.619 13.65 0.00 42.32 3.50
109 110 2.095263 CGGCTTTGGTGACATAAAGGTG 60.095 50.000 13.65 0.00 42.32 4.00
110 111 3.153919 GGCTTTGGTGACATAAAGGTGA 58.846 45.455 13.65 0.00 42.32 4.02
111 112 3.763897 GGCTTTGGTGACATAAAGGTGAT 59.236 43.478 13.65 0.00 42.32 3.06
112 113 4.380867 GGCTTTGGTGACATAAAGGTGATG 60.381 45.833 13.65 0.00 42.32 3.07
113 114 4.458989 GCTTTGGTGACATAAAGGTGATGA 59.541 41.667 13.65 0.00 42.32 2.92
114 115 5.619981 GCTTTGGTGACATAAAGGTGATGAC 60.620 44.000 13.65 0.00 42.32 3.06
115 116 4.632327 TGGTGACATAAAGGTGATGACA 57.368 40.909 0.00 0.00 33.40 3.58
116 117 4.979335 TGGTGACATAAAGGTGATGACAA 58.021 39.130 0.00 0.00 32.24 3.18
117 118 5.569355 TGGTGACATAAAGGTGATGACAAT 58.431 37.500 0.00 0.00 32.24 2.71
118 119 5.415389 TGGTGACATAAAGGTGATGACAATG 59.585 40.000 0.00 0.00 32.24 2.82
119 120 5.647658 GGTGACATAAAGGTGATGACAATGA 59.352 40.000 0.00 0.00 32.24 2.57
120 121 6.403636 GGTGACATAAAGGTGATGACAATGAC 60.404 42.308 0.00 0.00 32.24 3.06
121 122 5.351189 TGACATAAAGGTGATGACAATGACG 59.649 40.000 0.00 0.00 0.00 4.35
122 123 4.094887 ACATAAAGGTGATGACAATGACGC 59.905 41.667 0.00 0.00 0.00 5.19
123 124 2.479566 AAGGTGATGACAATGACGCT 57.520 45.000 0.00 0.00 0.00 5.07
124 125 2.015736 AGGTGATGACAATGACGCTC 57.984 50.000 0.00 0.00 0.00 5.03
125 126 1.552337 AGGTGATGACAATGACGCTCT 59.448 47.619 0.00 0.00 0.00 4.09
126 127 2.027745 AGGTGATGACAATGACGCTCTT 60.028 45.455 0.00 0.00 0.00 2.85
127 128 2.744202 GGTGATGACAATGACGCTCTTT 59.256 45.455 0.00 0.00 0.00 2.52
128 129 3.181516 GGTGATGACAATGACGCTCTTTC 60.182 47.826 0.00 0.00 0.00 2.62
129 130 2.667969 TGATGACAATGACGCTCTTTCG 59.332 45.455 0.00 0.00 0.00 3.46
130 131 2.432206 TGACAATGACGCTCTTTCGA 57.568 45.000 0.00 0.00 0.00 3.71
131 132 2.058798 TGACAATGACGCTCTTTCGAC 58.941 47.619 0.00 0.00 0.00 4.20
132 133 2.288213 TGACAATGACGCTCTTTCGACT 60.288 45.455 0.00 0.00 0.00 4.18
133 134 2.731976 GACAATGACGCTCTTTCGACTT 59.268 45.455 0.00 0.00 0.00 3.01
134 135 2.476619 ACAATGACGCTCTTTCGACTTG 59.523 45.455 0.00 0.00 0.00 3.16
135 136 1.071605 ATGACGCTCTTTCGACTTGC 58.928 50.000 0.00 0.00 0.00 4.01
136 137 0.032130 TGACGCTCTTTCGACTTGCT 59.968 50.000 0.00 0.00 0.00 3.91
137 138 0.436531 GACGCTCTTTCGACTTGCTG 59.563 55.000 0.00 0.00 0.00 4.41
138 139 0.249489 ACGCTCTTTCGACTTGCTGT 60.249 50.000 0.00 0.00 0.00 4.40
139 140 0.861837 CGCTCTTTCGACTTGCTGTT 59.138 50.000 0.00 0.00 0.00 3.16
140 141 1.397693 CGCTCTTTCGACTTGCTGTTG 60.398 52.381 0.00 0.00 0.00 3.33
141 142 1.599542 GCTCTTTCGACTTGCTGTTGT 59.400 47.619 0.00 0.00 0.00 3.32
142 143 2.600792 GCTCTTTCGACTTGCTGTTGTG 60.601 50.000 0.00 0.00 0.00 3.33
143 144 1.330521 TCTTTCGACTTGCTGTTGTGC 59.669 47.619 0.00 0.00 0.00 4.57
144 145 1.331756 CTTTCGACTTGCTGTTGTGCT 59.668 47.619 0.00 0.00 0.00 4.40
145 146 1.378531 TTCGACTTGCTGTTGTGCTT 58.621 45.000 0.00 0.00 0.00 3.91
146 147 0.657312 TCGACTTGCTGTTGTGCTTG 59.343 50.000 0.00 0.00 0.00 4.01
147 148 0.378257 CGACTTGCTGTTGTGCTTGT 59.622 50.000 0.00 0.00 0.00 3.16
148 149 1.597195 CGACTTGCTGTTGTGCTTGTA 59.403 47.619 0.00 0.00 0.00 2.41
149 150 2.348872 CGACTTGCTGTTGTGCTTGTAG 60.349 50.000 0.00 0.00 0.00 2.74
150 151 2.614057 GACTTGCTGTTGTGCTTGTAGT 59.386 45.455 0.00 0.00 0.00 2.73
151 152 2.614057 ACTTGCTGTTGTGCTTGTAGTC 59.386 45.455 0.00 0.00 0.00 2.59
152 153 1.217001 TGCTGTTGTGCTTGTAGTCG 58.783 50.000 0.00 0.00 0.00 4.18
153 154 1.217882 GCTGTTGTGCTTGTAGTCGT 58.782 50.000 0.00 0.00 0.00 4.34
154 155 1.192534 GCTGTTGTGCTTGTAGTCGTC 59.807 52.381 0.00 0.00 0.00 4.20
155 156 2.469826 CTGTTGTGCTTGTAGTCGTCA 58.530 47.619 0.00 0.00 0.00 4.35
156 157 2.198406 TGTTGTGCTTGTAGTCGTCAC 58.802 47.619 0.00 0.00 0.00 3.67
157 158 2.159156 TGTTGTGCTTGTAGTCGTCACT 60.159 45.455 0.00 0.00 36.55 3.41
158 159 3.067040 TGTTGTGCTTGTAGTCGTCACTA 59.933 43.478 0.00 0.00 33.62 2.74
159 160 3.554259 TGTGCTTGTAGTCGTCACTAG 57.446 47.619 0.00 0.00 35.67 2.57
160 161 3.143728 TGTGCTTGTAGTCGTCACTAGA 58.856 45.455 0.00 0.00 35.67 2.43
161 162 3.756963 TGTGCTTGTAGTCGTCACTAGAT 59.243 43.478 0.00 0.00 35.67 1.98
162 163 4.099120 GTGCTTGTAGTCGTCACTAGATG 58.901 47.826 0.00 0.00 35.67 2.90
163 164 3.109619 GCTTGTAGTCGTCACTAGATGC 58.890 50.000 0.00 4.40 40.29 3.91
164 165 3.427638 GCTTGTAGTCGTCACTAGATGCA 60.428 47.826 11.73 0.00 43.65 3.96
165 166 4.734989 GCTTGTAGTCGTCACTAGATGCAT 60.735 45.833 0.00 0.00 43.65 3.96
166 167 5.505819 GCTTGTAGTCGTCACTAGATGCATA 60.506 44.000 0.00 0.00 43.65 3.14
167 168 6.445357 TTGTAGTCGTCACTAGATGCATAA 57.555 37.500 0.00 0.00 35.67 1.90
168 169 6.445357 TGTAGTCGTCACTAGATGCATAAA 57.555 37.500 0.00 0.00 35.67 1.40
169 170 6.263344 TGTAGTCGTCACTAGATGCATAAAC 58.737 40.000 0.00 0.00 35.67 2.01
170 171 5.324784 AGTCGTCACTAGATGCATAAACA 57.675 39.130 0.00 0.00 0.00 2.83
171 172 5.344066 AGTCGTCACTAGATGCATAAACAG 58.656 41.667 0.00 0.00 0.00 3.16
172 173 4.504461 GTCGTCACTAGATGCATAAACAGG 59.496 45.833 0.00 0.00 0.00 4.00
173 174 4.401202 TCGTCACTAGATGCATAAACAGGA 59.599 41.667 0.00 0.00 0.00 3.86
174 175 4.742167 CGTCACTAGATGCATAAACAGGAG 59.258 45.833 0.00 0.00 0.00 3.69
175 176 4.509600 GTCACTAGATGCATAAACAGGAGC 59.490 45.833 0.00 0.00 0.00 4.70
176 177 4.406972 TCACTAGATGCATAAACAGGAGCT 59.593 41.667 0.00 0.00 0.00 4.09
177 178 4.749099 CACTAGATGCATAAACAGGAGCTC 59.251 45.833 4.71 4.71 0.00 4.09
178 179 3.205784 AGATGCATAAACAGGAGCTCC 57.794 47.619 26.22 26.22 0.00 4.70
179 180 2.158696 AGATGCATAAACAGGAGCTCCC 60.159 50.000 29.54 11.67 36.42 4.30
180 181 0.107703 TGCATAAACAGGAGCTCCCG 60.108 55.000 29.54 22.24 40.87 5.14
181 182 1.440145 GCATAAACAGGAGCTCCCGC 61.440 60.000 29.54 15.78 40.87 6.13
182 183 0.815615 CATAAACAGGAGCTCCCGCC 60.816 60.000 29.54 4.88 40.87 6.13
183 184 1.271840 ATAAACAGGAGCTCCCGCCA 61.272 55.000 29.54 11.46 40.87 5.69
184 185 1.899437 TAAACAGGAGCTCCCGCCAG 61.899 60.000 29.54 15.95 40.87 4.85
185 186 4.704103 ACAGGAGCTCCCGCCAGA 62.704 66.667 29.54 0.00 40.87 3.86
186 187 3.160047 CAGGAGCTCCCGCCAGAT 61.160 66.667 29.54 5.79 40.87 2.90
187 188 2.366167 AGGAGCTCCCGCCAGATT 60.366 61.111 29.54 4.94 40.87 2.40
188 189 2.110006 GGAGCTCCCGCCAGATTC 59.890 66.667 23.19 0.00 36.60 2.52
189 190 2.439104 GGAGCTCCCGCCAGATTCT 61.439 63.158 23.19 0.00 36.60 2.40
190 191 1.068921 GAGCTCCCGCCAGATTCTC 59.931 63.158 0.87 0.00 36.60 2.87
191 192 1.680522 GAGCTCCCGCCAGATTCTCA 61.681 60.000 0.87 0.00 36.60 3.27
192 193 1.221840 GCTCCCGCCAGATTCTCAA 59.778 57.895 0.00 0.00 0.00 3.02
193 194 0.392998 GCTCCCGCCAGATTCTCAAA 60.393 55.000 0.00 0.00 0.00 2.69
194 195 1.950484 GCTCCCGCCAGATTCTCAAAA 60.950 52.381 0.00 0.00 0.00 2.44
195 196 2.648059 CTCCCGCCAGATTCTCAAAAT 58.352 47.619 0.00 0.00 0.00 1.82
196 197 3.019564 CTCCCGCCAGATTCTCAAAATT 58.980 45.455 0.00 0.00 0.00 1.82
197 198 3.430453 TCCCGCCAGATTCTCAAAATTT 58.570 40.909 0.00 0.00 0.00 1.82
198 199 3.193267 TCCCGCCAGATTCTCAAAATTTG 59.807 43.478 0.00 0.00 0.00 2.32
199 200 3.193267 CCCGCCAGATTCTCAAAATTTGA 59.807 43.478 8.25 8.25 38.17 2.69
212 213 6.875948 TCAAAATTTGAGTTGATCCGAGAA 57.124 33.333 4.03 0.00 34.08 2.87
213 214 7.452880 TCAAAATTTGAGTTGATCCGAGAAT 57.547 32.000 4.03 0.00 34.08 2.40
214 215 7.307694 TCAAAATTTGAGTTGATCCGAGAATG 58.692 34.615 4.03 0.00 34.08 2.67
215 216 7.174772 TCAAAATTTGAGTTGATCCGAGAATGA 59.825 33.333 4.03 0.00 34.08 2.57
216 217 7.636150 AAATTTGAGTTGATCCGAGAATGAT 57.364 32.000 0.00 0.00 0.00 2.45
217 218 6.615264 ATTTGAGTTGATCCGAGAATGATG 57.385 37.500 0.00 0.00 0.00 3.07
218 219 3.461061 TGAGTTGATCCGAGAATGATGC 58.539 45.455 0.00 0.00 0.00 3.91
219 220 3.118665 TGAGTTGATCCGAGAATGATGCA 60.119 43.478 0.00 0.00 0.00 3.96
220 221 3.873361 GAGTTGATCCGAGAATGATGCAA 59.127 43.478 0.00 0.00 0.00 4.08
221 222 4.458397 AGTTGATCCGAGAATGATGCAAT 58.542 39.130 0.00 0.00 0.00 3.56
222 223 4.275196 AGTTGATCCGAGAATGATGCAATG 59.725 41.667 0.00 0.00 0.00 2.82
223 224 4.075963 TGATCCGAGAATGATGCAATGA 57.924 40.909 0.00 0.00 0.00 2.57
224 225 4.453751 TGATCCGAGAATGATGCAATGAA 58.546 39.130 0.00 0.00 0.00 2.57
225 226 4.883006 TGATCCGAGAATGATGCAATGAAA 59.117 37.500 0.00 0.00 0.00 2.69
226 227 5.533528 TGATCCGAGAATGATGCAATGAAAT 59.466 36.000 0.00 0.00 0.00 2.17
227 228 5.177725 TCCGAGAATGATGCAATGAAATG 57.822 39.130 0.00 0.00 0.00 2.32
228 229 4.883006 TCCGAGAATGATGCAATGAAATGA 59.117 37.500 0.00 0.00 0.00 2.57
229 230 5.357596 TCCGAGAATGATGCAATGAAATGAA 59.642 36.000 0.00 0.00 0.00 2.57
230 231 6.040054 TCCGAGAATGATGCAATGAAATGAAT 59.960 34.615 0.00 0.00 0.00 2.57
231 232 7.229106 TCCGAGAATGATGCAATGAAATGAATA 59.771 33.333 0.00 0.00 0.00 1.75
232 233 7.537649 CCGAGAATGATGCAATGAAATGAATAG 59.462 37.037 0.00 0.00 0.00 1.73
233 234 7.537649 CGAGAATGATGCAATGAAATGAATAGG 59.462 37.037 0.00 0.00 0.00 2.57
234 235 8.473358 AGAATGATGCAATGAAATGAATAGGA 57.527 30.769 0.00 0.00 0.00 2.94
235 236 8.358148 AGAATGATGCAATGAAATGAATAGGAC 58.642 33.333 0.00 0.00 0.00 3.85
236 237 7.591421 ATGATGCAATGAAATGAATAGGACA 57.409 32.000 0.00 0.00 0.00 4.02
237 238 7.407393 TGATGCAATGAAATGAATAGGACAA 57.593 32.000 0.00 0.00 0.00 3.18
238 239 7.485810 TGATGCAATGAAATGAATAGGACAAG 58.514 34.615 0.00 0.00 0.00 3.16
239 240 7.339976 TGATGCAATGAAATGAATAGGACAAGA 59.660 33.333 0.00 0.00 0.00 3.02
240 241 7.092137 TGCAATGAAATGAATAGGACAAGAG 57.908 36.000 0.00 0.00 0.00 2.85
241 242 6.885918 TGCAATGAAATGAATAGGACAAGAGA 59.114 34.615 0.00 0.00 0.00 3.10
242 243 7.394077 TGCAATGAAATGAATAGGACAAGAGAA 59.606 33.333 0.00 0.00 0.00 2.87
243 244 8.411683 GCAATGAAATGAATAGGACAAGAGAAT 58.588 33.333 0.00 0.00 0.00 2.40
250 251 8.986929 ATGAATAGGACAAGAGAATAAAAGGG 57.013 34.615 0.00 0.00 0.00 3.95
251 252 7.928873 TGAATAGGACAAGAGAATAAAAGGGT 58.071 34.615 0.00 0.00 0.00 4.34
252 253 9.053472 TGAATAGGACAAGAGAATAAAAGGGTA 57.947 33.333 0.00 0.00 0.00 3.69
253 254 9.327628 GAATAGGACAAGAGAATAAAAGGGTAC 57.672 37.037 0.00 0.00 0.00 3.34
254 255 6.954352 AGGACAAGAGAATAAAAGGGTACT 57.046 37.500 0.00 0.00 0.00 2.73
255 256 6.948589 AGGACAAGAGAATAAAAGGGTACTC 58.051 40.000 0.00 0.00 0.00 2.59
256 257 6.070136 AGGACAAGAGAATAAAAGGGTACTCC 60.070 42.308 0.00 0.00 0.00 3.85
272 273 6.668541 GGTACTCCCTCGGTTTTTATTTAC 57.331 41.667 0.00 0.00 0.00 2.01
273 274 6.409704 GGTACTCCCTCGGTTTTTATTTACT 58.590 40.000 0.00 0.00 0.00 2.24
274 275 6.881065 GGTACTCCCTCGGTTTTTATTTACTT 59.119 38.462 0.00 0.00 0.00 2.24
275 276 7.065085 GGTACTCCCTCGGTTTTTATTTACTTC 59.935 40.741 0.00 0.00 0.00 3.01
276 277 5.640783 ACTCCCTCGGTTTTTATTTACTTCG 59.359 40.000 0.00 0.00 0.00 3.79
277 278 4.392754 TCCCTCGGTTTTTATTTACTTCGC 59.607 41.667 0.00 0.00 0.00 4.70
278 279 4.154556 CCCTCGGTTTTTATTTACTTCGCA 59.845 41.667 0.00 0.00 0.00 5.10
279 280 5.163693 CCCTCGGTTTTTATTTACTTCGCAT 60.164 40.000 0.00 0.00 0.00 4.73
280 281 6.037391 CCCTCGGTTTTTATTTACTTCGCATA 59.963 38.462 0.00 0.00 0.00 3.14
281 282 7.255001 CCCTCGGTTTTTATTTACTTCGCATAT 60.255 37.037 0.00 0.00 0.00 1.78
282 283 8.126700 CCTCGGTTTTTATTTACTTCGCATATT 58.873 33.333 0.00 0.00 0.00 1.28
297 298 9.547753 ACTTCGCATATTATATTTGACTGAAGT 57.452 29.630 0.00 0.00 37.07 3.01
323 324 9.883142 TCAAACTTCATAAAATTTGACCAAGTT 57.117 25.926 7.48 7.48 36.42 2.66
468 469 8.770438 TTTGTCAAAGTTTACAAAGCTTGATT 57.230 26.923 0.00 0.00 39.88 2.57
469 470 8.770438 TTGTCAAAGTTTACAAAGCTTGATTT 57.230 26.923 0.00 0.00 32.86 2.17
470 471 8.770438 TGTCAAAGTTTACAAAGCTTGATTTT 57.230 26.923 0.00 0.00 0.00 1.82
471 472 8.655092 TGTCAAAGTTTACAAAGCTTGATTTTG 58.345 29.630 0.00 5.29 40.48 2.44
472 473 8.868916 GTCAAAGTTTACAAAGCTTGATTTTGA 58.131 29.630 0.00 7.44 38.55 2.69
473 474 8.868916 TCAAAGTTTACAAAGCTTGATTTTGAC 58.131 29.630 0.00 0.00 38.55 3.18
474 475 7.770801 AAGTTTACAAAGCTTGATTTTGACC 57.229 32.000 0.00 0.00 38.55 4.02
475 476 6.872920 AGTTTACAAAGCTTGATTTTGACCA 58.127 32.000 0.00 0.00 38.55 4.02
476 477 7.327214 AGTTTACAAAGCTTGATTTTGACCAA 58.673 30.769 0.00 0.00 38.55 3.67
477 478 7.821846 AGTTTACAAAGCTTGATTTTGACCAAA 59.178 29.630 0.00 0.00 38.55 3.28
478 479 7.769272 TTACAAAGCTTGATTTTGACCAAAG 57.231 32.000 0.00 0.00 38.55 2.77
479 480 4.571984 ACAAAGCTTGATTTTGACCAAAGC 59.428 37.500 0.00 0.00 38.55 3.51
480 481 4.677673 AAGCTTGATTTTGACCAAAGCT 57.322 36.364 0.00 2.50 31.55 3.74
481 482 5.789643 AAGCTTGATTTTGACCAAAGCTA 57.210 34.783 8.49 0.00 31.55 3.32
482 483 5.789643 AGCTTGATTTTGACCAAAGCTAA 57.210 34.783 6.43 0.00 31.55 3.09
483 484 6.350629 AGCTTGATTTTGACCAAAGCTAAT 57.649 33.333 6.43 0.00 31.55 1.73
484 485 7.466746 AGCTTGATTTTGACCAAAGCTAATA 57.533 32.000 6.43 0.00 31.55 0.98
485 486 8.071177 AGCTTGATTTTGACCAAAGCTAATAT 57.929 30.769 6.43 0.00 31.55 1.28
486 487 7.977853 AGCTTGATTTTGACCAAAGCTAATATG 59.022 33.333 6.43 0.00 31.55 1.78
487 488 7.254218 GCTTGATTTTGACCAAAGCTAATATGC 60.254 37.037 0.00 0.00 31.55 3.14
488 489 6.264832 TGATTTTGACCAAAGCTAATATGCG 58.735 36.000 0.00 0.00 38.13 4.73
489 490 4.630894 TTTGACCAAAGCTAATATGCGG 57.369 40.909 0.00 0.00 38.13 5.69
490 491 3.552132 TGACCAAAGCTAATATGCGGA 57.448 42.857 0.00 0.00 38.13 5.54
491 492 3.202906 TGACCAAAGCTAATATGCGGAC 58.797 45.455 0.00 0.00 38.13 4.79
492 493 3.118408 TGACCAAAGCTAATATGCGGACT 60.118 43.478 0.00 0.00 38.13 3.85
493 494 4.100344 TGACCAAAGCTAATATGCGGACTA 59.900 41.667 0.00 0.00 38.13 2.59
494 495 5.031066 ACCAAAGCTAATATGCGGACTAA 57.969 39.130 0.00 0.00 38.13 2.24
495 496 5.433526 ACCAAAGCTAATATGCGGACTAAA 58.566 37.500 0.00 0.00 38.13 1.85
496 497 6.062095 ACCAAAGCTAATATGCGGACTAAAT 58.938 36.000 0.00 0.00 38.13 1.40
497 498 7.221450 ACCAAAGCTAATATGCGGACTAAATA 58.779 34.615 0.00 0.00 38.13 1.40
498 499 7.717875 ACCAAAGCTAATATGCGGACTAAATAA 59.282 33.333 0.00 0.00 38.13 1.40
499 500 8.564574 CCAAAGCTAATATGCGGACTAAATAAA 58.435 33.333 0.00 0.00 38.13 1.40
500 501 9.944663 CAAAGCTAATATGCGGACTAAATAAAA 57.055 29.630 0.00 0.00 38.13 1.52
502 503 9.946165 AAGCTAATATGCGGACTAAATAAAAAC 57.054 29.630 0.00 0.00 38.13 2.43
503 504 8.280497 AGCTAATATGCGGACTAAATAAAAACG 58.720 33.333 0.00 0.00 38.13 3.60
504 505 8.277713 GCTAATATGCGGACTAAATAAAAACGA 58.722 33.333 0.00 0.00 0.00 3.85
507 508 5.285798 TGCGGACTAAATAAAAACGAAGG 57.714 39.130 0.00 0.00 0.00 3.46
508 509 4.154556 TGCGGACTAAATAAAAACGAAGGG 59.845 41.667 0.00 0.00 0.00 3.95
509 510 4.437794 GCGGACTAAATAAAAACGAAGGGG 60.438 45.833 0.00 0.00 0.00 4.79
510 511 4.095334 CGGACTAAATAAAAACGAAGGGGG 59.905 45.833 0.00 0.00 0.00 5.40
511 512 5.012239 GGACTAAATAAAAACGAAGGGGGT 58.988 41.667 0.00 0.00 0.00 4.95
512 513 6.179756 GGACTAAATAAAAACGAAGGGGGTA 58.820 40.000 0.00 0.00 0.00 3.69
513 514 6.094048 GGACTAAATAAAAACGAAGGGGGTAC 59.906 42.308 0.00 0.00 0.00 3.34
514 515 5.643348 ACTAAATAAAAACGAAGGGGGTACG 59.357 40.000 0.00 0.00 0.00 3.67
592 594 0.960364 TGCGTTGGCCTCTTTCCATC 60.960 55.000 3.32 0.00 38.85 3.51
701 706 1.112113 ACATAGCACAGGACCTACGG 58.888 55.000 0.00 0.00 0.00 4.02
702 707 1.112113 CATAGCACAGGACCTACGGT 58.888 55.000 0.00 0.00 39.44 4.83
703 708 2.304092 CATAGCACAGGACCTACGGTA 58.696 52.381 0.00 0.00 35.25 4.02
705 710 0.251474 AGCACAGGACCTACGGTACA 60.251 55.000 0.00 0.00 39.47 2.90
751 4210 2.216046 AGTTCCATCTACGCATGCATG 58.784 47.619 22.70 22.70 0.00 4.06
825 5586 2.431942 CACGTTACGCTCCGGCTT 60.432 61.111 4.09 0.00 36.09 4.35
879 5650 5.398169 CAGATAGATAGATGCCAACTCGAC 58.602 45.833 0.00 0.00 0.00 4.20
917 5691 2.530460 TTGCCTAGGAACCATGCATT 57.470 45.000 14.75 0.00 0.00 3.56
936 5710 3.907894 TTCAAACGTACCCATTCAAGC 57.092 42.857 0.00 0.00 0.00 4.01
975 5757 8.762426 GGCAACAAATACACTATAGTAACTAGC 58.238 37.037 4.74 1.84 0.00 3.42
976 5758 9.309516 GCAACAAATACACTATAGTAACTAGCA 57.690 33.333 4.74 0.00 0.00 3.49
987 5779 2.296471 AGTAACTAGCACTGACAGCGTT 59.704 45.455 1.25 0.00 37.01 4.84
2137 6968 2.946329 TGCAAGAAGTAAAACGCTTCCA 59.054 40.909 0.00 0.00 42.27 3.53
2138 6969 3.003275 TGCAAGAAGTAAAACGCTTCCAG 59.997 43.478 0.00 0.00 42.27 3.86
2139 6970 3.003378 GCAAGAAGTAAAACGCTTCCAGT 59.997 43.478 0.00 0.00 42.27 4.00
2140 6971 4.497507 GCAAGAAGTAAAACGCTTCCAGTT 60.498 41.667 0.00 0.00 42.27 3.16
2141 6972 5.205565 CAAGAAGTAAAACGCTTCCAGTTC 58.794 41.667 0.00 0.00 42.27 3.01
2142 6973 3.813724 AGAAGTAAAACGCTTCCAGTTCC 59.186 43.478 0.00 0.00 42.27 3.62
2149 6980 0.957395 CGCTTCCAGTTCCTGCATGT 60.957 55.000 0.00 0.00 0.00 3.21
2156 6987 3.716353 TCCAGTTCCTGCATGTATATGGT 59.284 43.478 1.33 0.00 34.79 3.55
2208 7044 2.143122 CATGCACGGTTGACAAGTACT 58.857 47.619 0.00 0.00 0.00 2.73
2209 7050 2.319136 TGCACGGTTGACAAGTACTT 57.681 45.000 1.12 1.12 0.00 2.24
2211 7052 2.159014 TGCACGGTTGACAAGTACTTCT 60.159 45.455 4.77 0.00 0.00 2.85
2269 7227 8.477419 TGGAACTTGGAACTTTATCAAGAAAT 57.523 30.769 8.95 0.00 39.97 2.17
2270 7228 9.581289 TGGAACTTGGAACTTTATCAAGAAATA 57.419 29.630 8.95 0.00 39.97 1.40
2315 7274 0.678366 TTGCACCGGCGTGGATATTT 60.678 50.000 6.01 0.00 45.35 1.40
2327 7286 4.206609 GCGTGGATATTTAGTCGAACTGTC 59.793 45.833 0.00 0.00 0.00 3.51
2361 7320 3.063452 CACCATGGAGTTGTTATACACGC 59.937 47.826 21.47 0.00 0.00 5.34
2369 7328 4.491676 AGTTGTTATACACGCGTGAATCT 58.508 39.130 42.94 24.45 0.00 2.40
2380 7340 3.435327 ACGCGTGAATCTGATTTGCTTAA 59.565 39.130 12.93 0.00 0.00 1.85
2381 7341 4.094887 ACGCGTGAATCTGATTTGCTTAAT 59.905 37.500 12.93 0.00 0.00 1.40
2401 7361 5.876612 AATAGCTTCACTGCTCAAGAAAG 57.123 39.130 0.00 0.00 42.97 2.62
2402 7362 2.502295 AGCTTCACTGCTCAAGAAAGG 58.498 47.619 0.00 0.00 39.34 3.11
2403 7363 2.105477 AGCTTCACTGCTCAAGAAAGGA 59.895 45.455 0.00 0.00 39.34 3.36
2404 7364 2.225255 GCTTCACTGCTCAAGAAAGGAC 59.775 50.000 0.00 0.00 0.00 3.85
2405 7365 2.550830 TCACTGCTCAAGAAAGGACC 57.449 50.000 0.00 0.00 0.00 4.46
2406 7366 2.050144 TCACTGCTCAAGAAAGGACCT 58.950 47.619 0.00 0.00 0.00 3.85
2407 7367 2.149578 CACTGCTCAAGAAAGGACCTG 58.850 52.381 0.00 0.00 0.00 4.00
2408 7368 1.072965 ACTGCTCAAGAAAGGACCTGG 59.927 52.381 0.00 0.00 0.00 4.45
2409 7369 1.072965 CTGCTCAAGAAAGGACCTGGT 59.927 52.381 0.00 0.00 0.00 4.00
2410 7370 1.202806 TGCTCAAGAAAGGACCTGGTG 60.203 52.381 2.82 0.00 0.00 4.17
2411 7371 1.072331 GCTCAAGAAAGGACCTGGTGA 59.928 52.381 2.82 0.00 0.00 4.02
2412 7372 2.290577 GCTCAAGAAAGGACCTGGTGAT 60.291 50.000 2.82 0.00 0.00 3.06
2413 7373 3.341823 CTCAAGAAAGGACCTGGTGATG 58.658 50.000 2.82 0.00 0.00 3.07
2414 7374 2.978978 TCAAGAAAGGACCTGGTGATGA 59.021 45.455 2.82 0.00 0.00 2.92
2415 7375 3.008375 TCAAGAAAGGACCTGGTGATGAG 59.992 47.826 2.82 0.00 0.00 2.90
2416 7376 1.912043 AGAAAGGACCTGGTGATGAGG 59.088 52.381 2.82 0.00 36.57 3.86
2417 7377 1.909302 GAAAGGACCTGGTGATGAGGA 59.091 52.381 2.82 0.00 34.37 3.71
2418 7378 1.577736 AAGGACCTGGTGATGAGGAG 58.422 55.000 2.82 0.00 34.37 3.69
2419 7379 0.326048 AGGACCTGGTGATGAGGAGG 60.326 60.000 2.82 0.00 34.37 4.30
2420 7380 1.524482 GACCTGGTGATGAGGAGGC 59.476 63.158 2.82 0.00 34.37 4.70
2421 7381 2.303549 GACCTGGTGATGAGGAGGCG 62.304 65.000 2.82 0.00 34.37 5.52
2422 7382 2.060383 CCTGGTGATGAGGAGGCGA 61.060 63.158 0.00 0.00 31.48 5.54
2423 7383 1.617018 CCTGGTGATGAGGAGGCGAA 61.617 60.000 0.00 0.00 31.48 4.70
2424 7384 0.250234 CTGGTGATGAGGAGGCGAAA 59.750 55.000 0.00 0.00 0.00 3.46
2425 7385 0.250234 TGGTGATGAGGAGGCGAAAG 59.750 55.000 0.00 0.00 0.00 2.62
2426 7386 0.537188 GGTGATGAGGAGGCGAAAGA 59.463 55.000 0.00 0.00 0.00 2.52
2427 7387 1.066143 GGTGATGAGGAGGCGAAAGAA 60.066 52.381 0.00 0.00 0.00 2.52
2428 7388 2.275318 GTGATGAGGAGGCGAAAGAAG 58.725 52.381 0.00 0.00 0.00 2.85
2429 7389 1.208052 TGATGAGGAGGCGAAAGAAGG 59.792 52.381 0.00 0.00 0.00 3.46
2430 7390 0.543749 ATGAGGAGGCGAAAGAAGGG 59.456 55.000 0.00 0.00 0.00 3.95
2431 7391 0.544357 TGAGGAGGCGAAAGAAGGGA 60.544 55.000 0.00 0.00 0.00 4.20
2432 7392 0.613777 GAGGAGGCGAAAGAAGGGAA 59.386 55.000 0.00 0.00 0.00 3.97
2433 7393 0.615850 AGGAGGCGAAAGAAGGGAAG 59.384 55.000 0.00 0.00 0.00 3.46
2434 7394 0.613777 GGAGGCGAAAGAAGGGAAGA 59.386 55.000 0.00 0.00 0.00 2.87
2435 7395 1.003233 GGAGGCGAAAGAAGGGAAGAA 59.997 52.381 0.00 0.00 0.00 2.52
2436 7396 2.552373 GGAGGCGAAAGAAGGGAAGAAA 60.552 50.000 0.00 0.00 0.00 2.52
2437 7397 3.348119 GAGGCGAAAGAAGGGAAGAAAT 58.652 45.455 0.00 0.00 0.00 2.17
2438 7398 3.348119 AGGCGAAAGAAGGGAAGAAATC 58.652 45.455 0.00 0.00 0.00 2.17
2439 7399 3.081804 GGCGAAAGAAGGGAAGAAATCA 58.918 45.455 0.00 0.00 0.00 2.57
2440 7400 3.119814 GGCGAAAGAAGGGAAGAAATCAC 60.120 47.826 0.00 0.00 0.00 3.06
2441 7401 3.424962 GCGAAAGAAGGGAAGAAATCACG 60.425 47.826 0.00 0.00 36.19 4.35
2442 7402 3.746492 CGAAAGAAGGGAAGAAATCACGT 59.254 43.478 0.00 0.00 36.19 4.49
2443 7403 4.377431 CGAAAGAAGGGAAGAAATCACGTG 60.377 45.833 9.94 9.94 36.19 4.49
2444 7404 3.771577 AGAAGGGAAGAAATCACGTGT 57.228 42.857 16.51 0.00 36.19 4.49
2445 7405 3.403038 AGAAGGGAAGAAATCACGTGTG 58.597 45.455 16.51 0.00 36.19 3.82
2446 7406 2.930826 AGGGAAGAAATCACGTGTGT 57.069 45.000 16.51 2.69 36.19 3.72
2448 7408 1.069227 GGGAAGAAATCACGTGTGTGC 60.069 52.381 16.51 3.17 46.01 4.57
2449 7409 1.601903 GGAAGAAATCACGTGTGTGCA 59.398 47.619 16.51 0.00 46.01 4.57
2450 7410 2.349817 GGAAGAAATCACGTGTGTGCAG 60.350 50.000 16.51 0.00 46.01 4.41
2454 7414 1.662517 AATCACGTGTGTGCAGTCAA 58.337 45.000 16.51 0.00 46.01 3.18
2490 7451 3.336138 AAGAAGGGGAGAAATCACGTC 57.664 47.619 0.00 0.00 0.00 4.34
2616 7577 5.048504 ACTGACAATGAAATGTGTGACATCC 60.049 40.000 0.00 0.00 37.97 3.51
3000 7973 3.471680 ACAAAGGCTGAAGTGTCTTCTC 58.528 45.455 10.21 3.48 0.00 2.87
3063 8036 0.392998 CTACTGCAACTGGGCGGATT 60.393 55.000 9.03 0.00 42.91 3.01
3108 8081 6.118170 CCTAAATGAGAGGATGAGAAGCAAA 58.882 40.000 0.00 0.00 35.99 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.610333 ACACTATAGACACACCATCTGGA 58.390 43.478 6.78 0.00 38.94 3.86
1 2 4.498177 CGACACTATAGACACACCATCTGG 60.498 50.000 6.78 0.00 42.17 3.86
2 3 4.096532 ACGACACTATAGACACACCATCTG 59.903 45.833 6.78 0.00 0.00 2.90
3 4 4.270834 ACGACACTATAGACACACCATCT 58.729 43.478 6.78 0.00 0.00 2.90
5 6 4.014406 TGACGACACTATAGACACACCAT 58.986 43.478 6.78 0.00 0.00 3.55
6 7 3.414269 TGACGACACTATAGACACACCA 58.586 45.455 6.78 0.00 0.00 4.17
7 8 3.688185 TCTGACGACACTATAGACACACC 59.312 47.826 6.78 0.00 0.00 4.16
8 9 4.201832 CCTCTGACGACACTATAGACACAC 60.202 50.000 6.78 0.00 0.00 3.82
9 10 3.939592 CCTCTGACGACACTATAGACACA 59.060 47.826 6.78 0.00 0.00 3.72
10 11 3.312973 CCCTCTGACGACACTATAGACAC 59.687 52.174 6.78 0.00 0.00 3.67
11 12 3.054582 ACCCTCTGACGACACTATAGACA 60.055 47.826 6.78 0.00 0.00 3.41
12 13 3.312973 CACCCTCTGACGACACTATAGAC 59.687 52.174 6.78 0.00 0.00 2.59
13 14 3.054582 ACACCCTCTGACGACACTATAGA 60.055 47.826 6.78 0.00 0.00 1.98
14 15 3.065510 CACACCCTCTGACGACACTATAG 59.934 52.174 0.00 0.00 0.00 1.31
15 16 3.014623 CACACCCTCTGACGACACTATA 58.985 50.000 0.00 0.00 0.00 1.31
16 17 1.819288 CACACCCTCTGACGACACTAT 59.181 52.381 0.00 0.00 0.00 2.12
17 18 1.244816 CACACCCTCTGACGACACTA 58.755 55.000 0.00 0.00 0.00 2.74
18 19 0.755698 ACACACCCTCTGACGACACT 60.756 55.000 0.00 0.00 0.00 3.55
19 20 0.597637 CACACACCCTCTGACGACAC 60.598 60.000 0.00 0.00 0.00 3.67
20 21 1.739667 CACACACCCTCTGACGACA 59.260 57.895 0.00 0.00 0.00 4.35
21 22 1.006102 CCACACACCCTCTGACGAC 60.006 63.158 0.00 0.00 0.00 4.34
22 23 2.207229 CCCACACACCCTCTGACGA 61.207 63.158 0.00 0.00 0.00 4.20
23 24 2.343758 CCCACACACCCTCTGACG 59.656 66.667 0.00 0.00 0.00 4.35
24 25 2.750350 CCCCACACACCCTCTGAC 59.250 66.667 0.00 0.00 0.00 3.51
25 26 3.249189 GCCCCACACACCCTCTGA 61.249 66.667 0.00 0.00 0.00 3.27
26 27 4.351054 GGCCCCACACACCCTCTG 62.351 72.222 0.00 0.00 0.00 3.35
27 28 2.781258 TATGGCCCCACACACCCTCT 62.781 60.000 0.00 0.00 0.00 3.69
28 29 2.270874 CTATGGCCCCACACACCCTC 62.271 65.000 0.00 0.00 0.00 4.30
29 30 2.204228 TATGGCCCCACACACCCT 60.204 61.111 0.00 0.00 0.00 4.34
30 31 2.275418 CTATGGCCCCACACACCC 59.725 66.667 0.00 0.00 0.00 4.61
31 32 2.440247 GCTATGGCCCCACACACC 60.440 66.667 0.00 0.00 0.00 4.16
32 33 2.824041 CGCTATGGCCCCACACAC 60.824 66.667 0.00 0.00 34.44 3.82
33 34 4.794648 GCGCTATGGCCCCACACA 62.795 66.667 0.00 0.00 34.44 3.72
34 35 4.794648 TGCGCTATGGCCCCACAC 62.795 66.667 9.73 0.00 34.44 3.82
35 36 4.040426 TTGCGCTATGGCCCCACA 62.040 61.111 9.73 0.00 34.44 4.17
36 37 3.518068 GTTGCGCTATGGCCCCAC 61.518 66.667 9.73 0.00 34.44 4.61
38 39 4.849310 TCGTTGCGCTATGGCCCC 62.849 66.667 9.73 0.00 34.44 5.80
39 40 2.117941 GATTCGTTGCGCTATGGCCC 62.118 60.000 9.73 0.00 34.44 5.80
40 41 1.279840 GATTCGTTGCGCTATGGCC 59.720 57.895 9.73 0.00 34.44 5.36
41 42 1.279840 GGATTCGTTGCGCTATGGC 59.720 57.895 9.73 0.00 0.00 4.40
42 43 0.532862 AGGGATTCGTTGCGCTATGG 60.533 55.000 9.73 0.00 0.00 2.74
43 44 0.583438 CAGGGATTCGTTGCGCTATG 59.417 55.000 9.73 6.88 0.00 2.23
44 45 0.464036 TCAGGGATTCGTTGCGCTAT 59.536 50.000 9.73 0.00 0.00 2.97
45 46 0.459585 GTCAGGGATTCGTTGCGCTA 60.460 55.000 9.73 0.00 0.00 4.26
46 47 1.741770 GTCAGGGATTCGTTGCGCT 60.742 57.895 9.73 0.00 0.00 5.92
47 48 2.750888 GGTCAGGGATTCGTTGCGC 61.751 63.158 0.00 0.00 0.00 6.09
48 49 2.452813 CGGTCAGGGATTCGTTGCG 61.453 63.158 0.00 0.00 0.00 4.85
49 50 1.359459 GACGGTCAGGGATTCGTTGC 61.359 60.000 2.62 0.00 35.91 4.17
50 51 0.739813 GGACGGTCAGGGATTCGTTG 60.740 60.000 10.76 0.00 35.91 4.10
51 52 1.189524 TGGACGGTCAGGGATTCGTT 61.190 55.000 10.76 0.00 35.91 3.85
52 53 1.189524 TTGGACGGTCAGGGATTCGT 61.190 55.000 10.76 0.00 38.62 3.85
53 54 0.178068 ATTGGACGGTCAGGGATTCG 59.822 55.000 10.76 0.00 0.00 3.34
54 55 2.169769 TGTATTGGACGGTCAGGGATTC 59.830 50.000 10.76 0.00 0.00 2.52
55 56 2.193127 TGTATTGGACGGTCAGGGATT 58.807 47.619 10.76 0.00 0.00 3.01
56 57 1.874129 TGTATTGGACGGTCAGGGAT 58.126 50.000 10.76 0.89 0.00 3.85
57 58 1.276989 GTTGTATTGGACGGTCAGGGA 59.723 52.381 10.76 0.00 0.00 4.20
58 59 1.002659 TGTTGTATTGGACGGTCAGGG 59.997 52.381 10.76 0.00 0.00 4.45
59 60 2.465860 TGTTGTATTGGACGGTCAGG 57.534 50.000 10.76 0.00 0.00 3.86
60 61 2.742053 CCTTGTTGTATTGGACGGTCAG 59.258 50.000 10.76 0.00 0.00 3.51
61 62 2.773487 CCTTGTTGTATTGGACGGTCA 58.227 47.619 10.76 0.00 0.00 4.02
62 63 1.467342 GCCTTGTTGTATTGGACGGTC 59.533 52.381 0.00 0.00 0.00 4.79
63 64 1.530323 GCCTTGTTGTATTGGACGGT 58.470 50.000 0.00 0.00 0.00 4.83
64 65 0.808755 GGCCTTGTTGTATTGGACGG 59.191 55.000 0.00 0.00 0.00 4.79
65 66 1.468520 CAGGCCTTGTTGTATTGGACG 59.531 52.381 0.00 0.00 31.70 4.79
66 67 1.202348 GCAGGCCTTGTTGTATTGGAC 59.798 52.381 0.00 0.00 0.00 4.02
67 68 1.075374 AGCAGGCCTTGTTGTATTGGA 59.925 47.619 0.00 0.00 0.00 3.53
68 69 1.474077 GAGCAGGCCTTGTTGTATTGG 59.526 52.381 0.00 0.00 0.00 3.16
69 70 1.131126 CGAGCAGGCCTTGTTGTATTG 59.869 52.381 0.00 0.00 0.00 1.90
70 71 1.453155 CGAGCAGGCCTTGTTGTATT 58.547 50.000 0.00 0.00 0.00 1.89
71 72 0.392998 CCGAGCAGGCCTTGTTGTAT 60.393 55.000 0.00 0.00 0.00 2.29
72 73 1.003839 CCGAGCAGGCCTTGTTGTA 60.004 57.895 0.00 0.00 0.00 2.41
73 74 2.281761 CCGAGCAGGCCTTGTTGT 60.282 61.111 0.00 0.00 0.00 3.32
82 83 2.032528 TCACCAAAGCCGAGCAGG 59.967 61.111 0.00 0.00 44.97 4.85
83 84 0.957395 ATGTCACCAAAGCCGAGCAG 60.957 55.000 0.00 0.00 0.00 4.24
84 85 0.323302 TATGTCACCAAAGCCGAGCA 59.677 50.000 0.00 0.00 0.00 4.26
85 86 1.448985 TTATGTCACCAAAGCCGAGC 58.551 50.000 0.00 0.00 0.00 5.03
86 87 2.420022 CCTTTATGTCACCAAAGCCGAG 59.580 50.000 4.04 0.00 31.69 4.63
87 88 2.224670 ACCTTTATGTCACCAAAGCCGA 60.225 45.455 4.04 0.00 31.69 5.54
88 89 2.095263 CACCTTTATGTCACCAAAGCCG 60.095 50.000 4.04 0.00 31.69 5.52
89 90 3.153919 TCACCTTTATGTCACCAAAGCC 58.846 45.455 4.04 0.00 31.69 4.35
90 91 4.458989 TCATCACCTTTATGTCACCAAAGC 59.541 41.667 4.04 0.00 31.69 3.51
91 92 5.473162 TGTCATCACCTTTATGTCACCAAAG 59.527 40.000 2.92 2.92 0.00 2.77
92 93 5.380900 TGTCATCACCTTTATGTCACCAAA 58.619 37.500 0.00 0.00 0.00 3.28
93 94 4.979335 TGTCATCACCTTTATGTCACCAA 58.021 39.130 0.00 0.00 0.00 3.67
94 95 4.632327 TGTCATCACCTTTATGTCACCA 57.368 40.909 0.00 0.00 0.00 4.17
95 96 5.647658 TCATTGTCATCACCTTTATGTCACC 59.352 40.000 0.00 0.00 0.00 4.02
96 97 6.546395 GTCATTGTCATCACCTTTATGTCAC 58.454 40.000 0.00 0.00 0.00 3.67
97 98 5.351189 CGTCATTGTCATCACCTTTATGTCA 59.649 40.000 0.00 0.00 0.00 3.58
98 99 5.727791 GCGTCATTGTCATCACCTTTATGTC 60.728 44.000 0.00 0.00 0.00 3.06
99 100 4.094887 GCGTCATTGTCATCACCTTTATGT 59.905 41.667 0.00 0.00 0.00 2.29
100 101 4.333649 AGCGTCATTGTCATCACCTTTATG 59.666 41.667 0.00 0.00 0.00 1.90
101 102 4.517285 AGCGTCATTGTCATCACCTTTAT 58.483 39.130 0.00 0.00 0.00 1.40
102 103 3.932710 GAGCGTCATTGTCATCACCTTTA 59.067 43.478 0.00 0.00 0.00 1.85
103 104 2.744202 GAGCGTCATTGTCATCACCTTT 59.256 45.455 0.00 0.00 0.00 3.11
104 105 2.027745 AGAGCGTCATTGTCATCACCTT 60.028 45.455 0.00 0.00 0.00 3.50
105 106 1.552337 AGAGCGTCATTGTCATCACCT 59.448 47.619 0.00 0.00 0.00 4.00
106 107 2.015736 AGAGCGTCATTGTCATCACC 57.984 50.000 0.00 0.00 0.00 4.02
107 108 3.482598 CGAAAGAGCGTCATTGTCATCAC 60.483 47.826 0.00 0.00 0.00 3.06
108 109 2.667969 CGAAAGAGCGTCATTGTCATCA 59.332 45.455 0.00 0.00 0.00 3.07
109 110 2.923655 TCGAAAGAGCGTCATTGTCATC 59.076 45.455 0.00 0.00 34.84 2.92
110 111 2.668457 GTCGAAAGAGCGTCATTGTCAT 59.332 45.455 0.00 0.00 43.49 3.06
111 112 2.058798 GTCGAAAGAGCGTCATTGTCA 58.941 47.619 0.00 0.00 43.49 3.58
112 113 2.329379 AGTCGAAAGAGCGTCATTGTC 58.671 47.619 0.00 0.00 43.49 3.18
113 114 2.440539 AGTCGAAAGAGCGTCATTGT 57.559 45.000 0.00 0.00 43.49 2.71
114 115 2.723010 GCAAGTCGAAAGAGCGTCATTG 60.723 50.000 0.00 0.00 43.49 2.82
115 116 1.461127 GCAAGTCGAAAGAGCGTCATT 59.539 47.619 0.00 0.00 43.49 2.57
116 117 1.071605 GCAAGTCGAAAGAGCGTCAT 58.928 50.000 0.00 0.00 43.49 3.06
117 118 0.032130 AGCAAGTCGAAAGAGCGTCA 59.968 50.000 0.00 0.00 43.49 4.35
118 119 0.436531 CAGCAAGTCGAAAGAGCGTC 59.563 55.000 0.00 0.00 43.49 5.19
119 120 0.249489 ACAGCAAGTCGAAAGAGCGT 60.249 50.000 0.00 0.00 43.49 5.07
120 121 0.861837 AACAGCAAGTCGAAAGAGCG 59.138 50.000 0.00 0.00 43.49 5.03
121 122 1.599542 ACAACAGCAAGTCGAAAGAGC 59.400 47.619 0.00 0.00 43.49 4.09
122 123 2.600792 GCACAACAGCAAGTCGAAAGAG 60.601 50.000 0.00 0.00 43.49 2.85
123 124 1.330521 GCACAACAGCAAGTCGAAAGA 59.669 47.619 0.00 0.00 38.16 2.52
124 125 1.331756 AGCACAACAGCAAGTCGAAAG 59.668 47.619 0.00 0.00 36.85 2.62
125 126 1.378531 AGCACAACAGCAAGTCGAAA 58.621 45.000 0.00 0.00 36.85 3.46
126 127 1.063912 CAAGCACAACAGCAAGTCGAA 59.936 47.619 0.00 0.00 36.85 3.71
127 128 0.657312 CAAGCACAACAGCAAGTCGA 59.343 50.000 0.00 0.00 36.85 4.20
128 129 0.378257 ACAAGCACAACAGCAAGTCG 59.622 50.000 0.00 0.00 36.85 4.18
129 130 2.614057 ACTACAAGCACAACAGCAAGTC 59.386 45.455 0.00 0.00 36.85 3.01
130 131 2.614057 GACTACAAGCACAACAGCAAGT 59.386 45.455 0.00 0.00 36.85 3.16
131 132 2.348872 CGACTACAAGCACAACAGCAAG 60.349 50.000 0.00 0.00 36.85 4.01
132 133 1.597195 CGACTACAAGCACAACAGCAA 59.403 47.619 0.00 0.00 36.85 3.91
133 134 1.217001 CGACTACAAGCACAACAGCA 58.783 50.000 0.00 0.00 36.85 4.41
134 135 1.192534 GACGACTACAAGCACAACAGC 59.807 52.381 0.00 0.00 0.00 4.40
135 136 2.218759 GTGACGACTACAAGCACAACAG 59.781 50.000 0.00 0.00 0.00 3.16
136 137 2.159156 AGTGACGACTACAAGCACAACA 60.159 45.455 0.00 0.00 32.16 3.33
137 138 2.470821 AGTGACGACTACAAGCACAAC 58.529 47.619 0.00 0.00 32.16 3.32
138 139 2.882927 AGTGACGACTACAAGCACAA 57.117 45.000 0.00 0.00 32.16 3.33
139 140 3.143728 TCTAGTGACGACTACAAGCACA 58.856 45.455 0.00 0.00 33.21 4.57
140 141 3.826236 TCTAGTGACGACTACAAGCAC 57.174 47.619 0.00 0.00 33.21 4.40
141 142 3.427638 GCATCTAGTGACGACTACAAGCA 60.428 47.826 0.00 0.00 33.21 3.91
142 143 3.109619 GCATCTAGTGACGACTACAAGC 58.890 50.000 0.00 0.00 33.21 4.01
143 144 4.357018 TGCATCTAGTGACGACTACAAG 57.643 45.455 0.00 0.00 33.21 3.16
144 145 4.983671 ATGCATCTAGTGACGACTACAA 57.016 40.909 0.00 0.00 33.21 2.41
145 146 6.127842 TGTTTATGCATCTAGTGACGACTACA 60.128 38.462 0.19 0.00 33.21 2.74
146 147 6.263344 TGTTTATGCATCTAGTGACGACTAC 58.737 40.000 0.19 0.00 33.21 2.73
147 148 6.445357 TGTTTATGCATCTAGTGACGACTA 57.555 37.500 0.19 0.00 33.21 2.59
148 149 5.324784 TGTTTATGCATCTAGTGACGACT 57.675 39.130 0.19 0.00 36.07 4.18
149 150 4.504461 CCTGTTTATGCATCTAGTGACGAC 59.496 45.833 0.19 0.00 0.00 4.34
150 151 4.401202 TCCTGTTTATGCATCTAGTGACGA 59.599 41.667 0.19 0.00 0.00 4.20
151 152 4.682787 TCCTGTTTATGCATCTAGTGACG 58.317 43.478 0.19 0.00 0.00 4.35
152 153 4.509600 GCTCCTGTTTATGCATCTAGTGAC 59.490 45.833 0.19 0.00 0.00 3.67
153 154 4.406972 AGCTCCTGTTTATGCATCTAGTGA 59.593 41.667 0.19 0.00 0.00 3.41
154 155 4.701765 AGCTCCTGTTTATGCATCTAGTG 58.298 43.478 0.19 0.00 0.00 2.74
155 156 4.202305 GGAGCTCCTGTTTATGCATCTAGT 60.202 45.833 26.25 0.00 0.00 2.57
156 157 4.314121 GGAGCTCCTGTTTATGCATCTAG 58.686 47.826 26.25 0.00 0.00 2.43
157 158 3.071602 GGGAGCTCCTGTTTATGCATCTA 59.928 47.826 31.36 0.00 35.95 1.98
158 159 2.158696 GGGAGCTCCTGTTTATGCATCT 60.159 50.000 31.36 0.00 35.95 2.90
159 160 2.225467 GGGAGCTCCTGTTTATGCATC 58.775 52.381 31.36 7.09 35.95 3.91
160 161 1.475751 CGGGAGCTCCTGTTTATGCAT 60.476 52.381 30.58 3.79 37.62 3.96
161 162 0.107703 CGGGAGCTCCTGTTTATGCA 60.108 55.000 30.58 0.00 37.62 3.96
162 163 2.695314 CGGGAGCTCCTGTTTATGC 58.305 57.895 30.58 11.92 37.62 3.14
175 176 2.113860 TTTTGAGAATCTGGCGGGAG 57.886 50.000 0.00 0.00 34.92 4.30
176 177 2.806945 ATTTTGAGAATCTGGCGGGA 57.193 45.000 0.00 0.00 34.92 5.14
177 178 3.193267 TCAAATTTTGAGAATCTGGCGGG 59.807 43.478 7.74 0.00 34.08 6.13
178 179 4.439305 TCAAATTTTGAGAATCTGGCGG 57.561 40.909 7.74 0.00 34.08 6.13
189 190 6.875948 TTCTCGGATCAACTCAAATTTTGA 57.124 33.333 11.19 11.19 36.21 2.69
190 191 7.307694 TCATTCTCGGATCAACTCAAATTTTG 58.692 34.615 2.59 2.59 0.00 2.44
191 192 7.452880 TCATTCTCGGATCAACTCAAATTTT 57.547 32.000 0.00 0.00 0.00 1.82
192 193 7.478322 CATCATTCTCGGATCAACTCAAATTT 58.522 34.615 0.00 0.00 0.00 1.82
193 194 6.459298 GCATCATTCTCGGATCAACTCAAATT 60.459 38.462 0.00 0.00 0.00 1.82
194 195 5.008415 GCATCATTCTCGGATCAACTCAAAT 59.992 40.000 0.00 0.00 0.00 2.32
195 196 4.333649 GCATCATTCTCGGATCAACTCAAA 59.666 41.667 0.00 0.00 0.00 2.69
196 197 3.873361 GCATCATTCTCGGATCAACTCAA 59.127 43.478 0.00 0.00 0.00 3.02
197 198 3.118665 TGCATCATTCTCGGATCAACTCA 60.119 43.478 0.00 0.00 0.00 3.41
198 199 3.461061 TGCATCATTCTCGGATCAACTC 58.539 45.455 0.00 0.00 0.00 3.01
199 200 3.548745 TGCATCATTCTCGGATCAACT 57.451 42.857 0.00 0.00 0.00 3.16
200 201 4.274214 TCATTGCATCATTCTCGGATCAAC 59.726 41.667 0.00 0.00 0.00 3.18
201 202 4.453751 TCATTGCATCATTCTCGGATCAA 58.546 39.130 0.00 0.00 0.00 2.57
202 203 4.075963 TCATTGCATCATTCTCGGATCA 57.924 40.909 0.00 0.00 0.00 2.92
203 204 5.428496 TTTCATTGCATCATTCTCGGATC 57.572 39.130 0.00 0.00 0.00 3.36
204 205 5.533528 TCATTTCATTGCATCATTCTCGGAT 59.466 36.000 0.00 0.00 0.00 4.18
205 206 4.883006 TCATTTCATTGCATCATTCTCGGA 59.117 37.500 0.00 0.00 0.00 4.55
206 207 5.177725 TCATTTCATTGCATCATTCTCGG 57.822 39.130 0.00 0.00 0.00 4.63
207 208 7.537649 CCTATTCATTTCATTGCATCATTCTCG 59.462 37.037 0.00 0.00 0.00 4.04
208 209 8.573885 TCCTATTCATTTCATTGCATCATTCTC 58.426 33.333 0.00 0.00 0.00 2.87
209 210 8.358148 GTCCTATTCATTTCATTGCATCATTCT 58.642 33.333 0.00 0.00 0.00 2.40
210 211 8.139350 TGTCCTATTCATTTCATTGCATCATTC 58.861 33.333 0.00 0.00 0.00 2.67
211 212 8.014070 TGTCCTATTCATTTCATTGCATCATT 57.986 30.769 0.00 0.00 0.00 2.57
212 213 7.591421 TGTCCTATTCATTTCATTGCATCAT 57.409 32.000 0.00 0.00 0.00 2.45
213 214 7.339976 TCTTGTCCTATTCATTTCATTGCATCA 59.660 33.333 0.00 0.00 0.00 3.07
214 215 7.709947 TCTTGTCCTATTCATTTCATTGCATC 58.290 34.615 0.00 0.00 0.00 3.91
215 216 7.558807 TCTCTTGTCCTATTCATTTCATTGCAT 59.441 33.333 0.00 0.00 0.00 3.96
216 217 6.885918 TCTCTTGTCCTATTCATTTCATTGCA 59.114 34.615 0.00 0.00 0.00 4.08
217 218 7.325660 TCTCTTGTCCTATTCATTTCATTGC 57.674 36.000 0.00 0.00 0.00 3.56
224 225 9.413734 CCCTTTTATTCTCTTGTCCTATTCATT 57.586 33.333 0.00 0.00 0.00 2.57
225 226 8.560903 ACCCTTTTATTCTCTTGTCCTATTCAT 58.439 33.333 0.00 0.00 0.00 2.57
226 227 7.928873 ACCCTTTTATTCTCTTGTCCTATTCA 58.071 34.615 0.00 0.00 0.00 2.57
227 228 9.327628 GTACCCTTTTATTCTCTTGTCCTATTC 57.672 37.037 0.00 0.00 0.00 1.75
228 229 9.059023 AGTACCCTTTTATTCTCTTGTCCTATT 57.941 33.333 0.00 0.00 0.00 1.73
229 230 8.625467 AGTACCCTTTTATTCTCTTGTCCTAT 57.375 34.615 0.00 0.00 0.00 2.57
230 231 7.125356 GGAGTACCCTTTTATTCTCTTGTCCTA 59.875 40.741 0.00 0.00 0.00 2.94
231 232 6.070136 GGAGTACCCTTTTATTCTCTTGTCCT 60.070 42.308 0.00 0.00 0.00 3.85
232 233 6.114089 GGAGTACCCTTTTATTCTCTTGTCC 58.886 44.000 0.00 0.00 0.00 4.02
249 250 6.409704 AGTAAATAAAAACCGAGGGAGTACC 58.590 40.000 0.00 0.00 40.67 3.34
250 251 7.201470 CGAAGTAAATAAAAACCGAGGGAGTAC 60.201 40.741 0.00 0.00 0.00 2.73
251 252 6.813152 CGAAGTAAATAAAAACCGAGGGAGTA 59.187 38.462 0.00 0.00 0.00 2.59
252 253 5.640783 CGAAGTAAATAAAAACCGAGGGAGT 59.359 40.000 0.00 0.00 0.00 3.85
253 254 5.446875 GCGAAGTAAATAAAAACCGAGGGAG 60.447 44.000 0.00 0.00 0.00 4.30
254 255 4.392754 GCGAAGTAAATAAAAACCGAGGGA 59.607 41.667 0.00 0.00 0.00 4.20
255 256 4.154556 TGCGAAGTAAATAAAAACCGAGGG 59.845 41.667 0.00 0.00 0.00 4.30
256 257 5.285798 TGCGAAGTAAATAAAAACCGAGG 57.714 39.130 0.00 0.00 0.00 4.63
271 272 9.547753 ACTTCAGTCAAATATAATATGCGAAGT 57.452 29.630 0.00 0.00 34.83 3.01
297 298 9.883142 AACTTGGTCAAATTTTATGAAGTTTGA 57.117 25.926 14.36 14.36 44.28 2.69
443 444 8.770438 AATCAAGCTTTGTAAACTTTGACAAA 57.230 26.923 0.00 0.00 41.90 2.83
444 445 8.770438 AAATCAAGCTTTGTAAACTTTGACAA 57.230 26.923 0.00 0.00 33.81 3.18
445 446 8.655092 CAAAATCAAGCTTTGTAAACTTTGACA 58.345 29.630 0.00 0.00 0.00 3.58
446 447 8.868916 TCAAAATCAAGCTTTGTAAACTTTGAC 58.131 29.630 0.00 0.00 35.65 3.18
447 448 8.868916 GTCAAAATCAAGCTTTGTAAACTTTGA 58.131 29.630 0.00 3.22 35.65 2.69
448 449 8.116136 GGTCAAAATCAAGCTTTGTAAACTTTG 58.884 33.333 0.00 0.88 35.65 2.77
449 450 7.821846 TGGTCAAAATCAAGCTTTGTAAACTTT 59.178 29.630 0.00 0.00 35.65 2.66
450 451 7.327214 TGGTCAAAATCAAGCTTTGTAAACTT 58.673 30.769 0.00 0.00 35.65 2.66
451 452 6.872920 TGGTCAAAATCAAGCTTTGTAAACT 58.127 32.000 0.00 0.00 35.65 2.66
452 453 7.532682 TTGGTCAAAATCAAGCTTTGTAAAC 57.467 32.000 0.00 0.00 35.65 2.01
453 454 7.201600 GCTTTGGTCAAAATCAAGCTTTGTAAA 60.202 33.333 0.00 0.00 35.65 2.01
454 455 6.257630 GCTTTGGTCAAAATCAAGCTTTGTAA 59.742 34.615 0.00 0.00 35.65 2.41
455 456 5.752955 GCTTTGGTCAAAATCAAGCTTTGTA 59.247 36.000 0.00 0.00 35.65 2.41
456 457 4.571984 GCTTTGGTCAAAATCAAGCTTTGT 59.428 37.500 0.00 0.00 35.65 2.83
457 458 4.812626 AGCTTTGGTCAAAATCAAGCTTTG 59.187 37.500 0.00 0.00 35.51 2.77
458 459 5.027293 AGCTTTGGTCAAAATCAAGCTTT 57.973 34.783 0.00 0.00 29.75 3.51
459 460 4.677673 AGCTTTGGTCAAAATCAAGCTT 57.322 36.364 0.00 0.00 29.75 3.74
460 461 5.789643 TTAGCTTTGGTCAAAATCAAGCT 57.210 34.783 9.50 9.50 34.43 3.74
461 462 7.254218 GCATATTAGCTTTGGTCAAAATCAAGC 60.254 37.037 0.00 0.00 0.00 4.01
462 463 7.043854 CGCATATTAGCTTTGGTCAAAATCAAG 60.044 37.037 0.00 0.00 0.00 3.02
463 464 6.751425 CGCATATTAGCTTTGGTCAAAATCAA 59.249 34.615 0.00 0.00 0.00 2.57
464 465 6.264832 CGCATATTAGCTTTGGTCAAAATCA 58.735 36.000 0.00 0.00 0.00 2.57
465 466 5.687285 CCGCATATTAGCTTTGGTCAAAATC 59.313 40.000 0.00 0.00 0.00 2.17
466 467 5.359576 TCCGCATATTAGCTTTGGTCAAAAT 59.640 36.000 0.00 0.00 0.00 1.82
467 468 4.702612 TCCGCATATTAGCTTTGGTCAAAA 59.297 37.500 0.00 0.00 0.00 2.44
468 469 4.095782 GTCCGCATATTAGCTTTGGTCAAA 59.904 41.667 0.00 0.00 0.00 2.69
469 470 3.625764 GTCCGCATATTAGCTTTGGTCAA 59.374 43.478 0.00 0.00 0.00 3.18
470 471 3.118408 AGTCCGCATATTAGCTTTGGTCA 60.118 43.478 0.00 0.00 0.00 4.02
471 472 3.467803 AGTCCGCATATTAGCTTTGGTC 58.532 45.455 0.00 0.00 0.00 4.02
472 473 3.560636 AGTCCGCATATTAGCTTTGGT 57.439 42.857 0.00 0.00 0.00 3.67
473 474 6.560253 ATTTAGTCCGCATATTAGCTTTGG 57.440 37.500 0.00 0.00 0.00 3.28
474 475 9.944663 TTTTATTTAGTCCGCATATTAGCTTTG 57.055 29.630 0.00 0.00 0.00 2.77
476 477 9.946165 GTTTTTATTTAGTCCGCATATTAGCTT 57.054 29.630 0.00 0.00 0.00 3.74
477 478 8.280497 CGTTTTTATTTAGTCCGCATATTAGCT 58.720 33.333 0.00 0.00 0.00 3.32
478 479 8.277713 TCGTTTTTATTTAGTCCGCATATTAGC 58.722 33.333 0.00 0.00 0.00 3.09
481 482 8.126700 CCTTCGTTTTTATTTAGTCCGCATATT 58.873 33.333 0.00 0.00 0.00 1.28
482 483 7.255001 CCCTTCGTTTTTATTTAGTCCGCATAT 60.255 37.037 0.00 0.00 0.00 1.78
483 484 6.037391 CCCTTCGTTTTTATTTAGTCCGCATA 59.963 38.462 0.00 0.00 0.00 3.14
484 485 5.163693 CCCTTCGTTTTTATTTAGTCCGCAT 60.164 40.000 0.00 0.00 0.00 4.73
485 486 4.154556 CCCTTCGTTTTTATTTAGTCCGCA 59.845 41.667 0.00 0.00 0.00 5.69
486 487 4.437794 CCCCTTCGTTTTTATTTAGTCCGC 60.438 45.833 0.00 0.00 0.00 5.54
487 488 4.095334 CCCCCTTCGTTTTTATTTAGTCCG 59.905 45.833 0.00 0.00 0.00 4.79
488 489 5.012239 ACCCCCTTCGTTTTTATTTAGTCC 58.988 41.667 0.00 0.00 0.00 3.85
489 490 6.183360 CGTACCCCCTTCGTTTTTATTTAGTC 60.183 42.308 0.00 0.00 0.00 2.59
490 491 5.643348 CGTACCCCCTTCGTTTTTATTTAGT 59.357 40.000 0.00 0.00 0.00 2.24
491 492 5.643348 ACGTACCCCCTTCGTTTTTATTTAG 59.357 40.000 0.00 0.00 34.07 1.85
492 493 5.555966 ACGTACCCCCTTCGTTTTTATTTA 58.444 37.500 0.00 0.00 34.07 1.40
493 494 4.397420 ACGTACCCCCTTCGTTTTTATTT 58.603 39.130 0.00 0.00 34.07 1.40
494 495 4.019792 ACGTACCCCCTTCGTTTTTATT 57.980 40.909 0.00 0.00 34.07 1.40
495 496 3.701205 ACGTACCCCCTTCGTTTTTAT 57.299 42.857 0.00 0.00 34.07 1.40
496 497 3.137533 CAACGTACCCCCTTCGTTTTTA 58.862 45.455 0.00 0.00 44.08 1.52
497 498 1.948834 CAACGTACCCCCTTCGTTTTT 59.051 47.619 0.00 0.00 44.08 1.94
498 499 1.134128 ACAACGTACCCCCTTCGTTTT 60.134 47.619 0.00 0.00 44.08 2.43
499 500 0.469494 ACAACGTACCCCCTTCGTTT 59.531 50.000 0.00 0.00 44.08 3.60
500 501 1.337118 TACAACGTACCCCCTTCGTT 58.663 50.000 0.00 0.00 46.22 3.85
501 502 1.337118 TTACAACGTACCCCCTTCGT 58.663 50.000 0.00 0.00 39.49 3.85
502 503 2.094078 TGATTACAACGTACCCCCTTCG 60.094 50.000 0.00 0.00 0.00 3.79
503 504 3.615224 TGATTACAACGTACCCCCTTC 57.385 47.619 0.00 0.00 0.00 3.46
504 505 3.307904 CCTTGATTACAACGTACCCCCTT 60.308 47.826 0.00 0.00 32.27 3.95
505 506 2.237893 CCTTGATTACAACGTACCCCCT 59.762 50.000 0.00 0.00 32.27 4.79
506 507 2.236893 TCCTTGATTACAACGTACCCCC 59.763 50.000 0.00 0.00 32.27 5.40
507 508 3.264947 GTCCTTGATTACAACGTACCCC 58.735 50.000 0.00 0.00 32.27 4.95
508 509 2.925563 CGTCCTTGATTACAACGTACCC 59.074 50.000 0.00 0.00 32.27 3.69
509 510 2.925563 CCGTCCTTGATTACAACGTACC 59.074 50.000 0.00 0.00 32.27 3.34
510 511 2.346545 GCCGTCCTTGATTACAACGTAC 59.653 50.000 0.00 0.00 32.27 3.67
511 512 2.231964 AGCCGTCCTTGATTACAACGTA 59.768 45.455 0.00 0.00 32.27 3.57
512 513 1.001633 AGCCGTCCTTGATTACAACGT 59.998 47.619 0.00 0.00 32.27 3.99
513 514 1.722011 AGCCGTCCTTGATTACAACG 58.278 50.000 0.00 0.00 32.27 4.10
514 515 4.435121 CGTTTAGCCGTCCTTGATTACAAC 60.435 45.833 0.00 0.00 32.27 3.32
592 594 3.444742 TGCCAGGATGCAACTTAATCTTG 59.555 43.478 0.00 0.00 38.56 3.02
751 4210 1.670811 ACTTTGCGTGCATATAGGTGC 59.329 47.619 0.00 0.00 45.25 5.01
752 4211 6.618592 GCTTATACTTTGCGTGCATATAGGTG 60.619 42.308 0.00 0.00 0.00 4.00
754 4213 5.639506 AGCTTATACTTTGCGTGCATATAGG 59.360 40.000 0.00 0.00 0.00 2.57
755 4214 6.712241 AGCTTATACTTTGCGTGCATATAG 57.288 37.500 0.00 0.00 0.00 1.31
801 4261 4.657824 AGCGTAACGTGCCGTGCT 62.658 61.111 8.63 3.64 39.99 4.40
917 5691 2.156098 GGCTTGAATGGGTACGTTTGA 58.844 47.619 0.00 0.00 0.00 2.69
949 5728 8.762426 GCTAGTTACTATAGTGTATTTGTTGCC 58.238 37.037 15.90 0.00 0.00 4.52
958 5737 7.012138 GCTGTCAGTGCTAGTTACTATAGTGTA 59.988 40.741 15.90 0.57 0.00 2.90
975 5757 2.094659 CGCCCTAACGCTGTCAGTG 61.095 63.158 11.92 11.92 0.00 3.66
976 5758 2.261671 CGCCCTAACGCTGTCAGT 59.738 61.111 0.93 0.00 0.00 3.41
1970 6789 1.600916 GAGGTGGTGAAGGTGGCAC 60.601 63.158 9.70 9.70 35.56 5.01
2137 6968 4.410228 ACTCACCATATACATGCAGGAACT 59.590 41.667 4.84 0.00 43.88 3.01
2138 6969 4.512944 CACTCACCATATACATGCAGGAAC 59.487 45.833 4.84 0.00 0.00 3.62
2139 6970 4.164030 ACACTCACCATATACATGCAGGAA 59.836 41.667 4.84 0.00 0.00 3.36
2140 6971 3.711190 ACACTCACCATATACATGCAGGA 59.289 43.478 4.84 0.00 0.00 3.86
2141 6972 4.077300 ACACTCACCATATACATGCAGG 57.923 45.455 0.00 0.00 0.00 4.85
2142 6973 4.877823 ACAACACTCACCATATACATGCAG 59.122 41.667 0.00 0.00 0.00 4.41
2149 6980 4.141801 GGCCAGTACAACACTCACCATATA 60.142 45.833 0.00 0.00 34.26 0.86
2156 6987 0.249699 CACGGCCAGTACAACACTCA 60.250 55.000 2.24 0.00 34.26 3.41
2208 7044 8.710749 ATTATGCCCTTTGCTTATTCATAGAA 57.289 30.769 0.00 0.00 42.00 2.10
2209 7050 8.710749 AATTATGCCCTTTGCTTATTCATAGA 57.289 30.769 0.00 0.00 42.00 1.98
2211 7052 8.922237 TCAAATTATGCCCTTTGCTTATTCATA 58.078 29.630 0.00 0.00 42.00 2.15
2344 7303 2.030096 TCACGCGTGTATAACAACTCCA 60.030 45.455 35.74 11.63 0.00 3.86
2350 7309 4.099380 TCAGATTCACGCGTGTATAACA 57.901 40.909 35.74 15.49 0.00 2.41
2354 7313 3.242413 GCAAATCAGATTCACGCGTGTAT 60.242 43.478 35.74 31.91 0.00 2.29
2355 7314 2.093625 GCAAATCAGATTCACGCGTGTA 59.906 45.455 35.74 28.70 0.00 2.90
2380 7340 4.019860 TCCTTTCTTGAGCAGTGAAGCTAT 60.020 41.667 0.00 0.00 46.75 2.97
2381 7341 3.324846 TCCTTTCTTGAGCAGTGAAGCTA 59.675 43.478 0.00 0.00 46.75 3.32
2389 7349 1.072965 ACCAGGTCCTTTCTTGAGCAG 59.927 52.381 0.00 0.00 32.75 4.24
2392 7352 3.008375 TCATCACCAGGTCCTTTCTTGAG 59.992 47.826 0.00 0.00 0.00 3.02
2401 7361 1.977293 GCCTCCTCATCACCAGGTCC 61.977 65.000 0.00 0.00 32.20 4.46
2402 7362 1.524482 GCCTCCTCATCACCAGGTC 59.476 63.158 0.00 0.00 32.20 3.85
2403 7363 2.362369 CGCCTCCTCATCACCAGGT 61.362 63.158 0.00 0.00 32.20 4.00
2404 7364 1.617018 TTCGCCTCCTCATCACCAGG 61.617 60.000 0.00 0.00 0.00 4.45
2405 7365 0.250234 TTTCGCCTCCTCATCACCAG 59.750 55.000 0.00 0.00 0.00 4.00
2406 7366 0.250234 CTTTCGCCTCCTCATCACCA 59.750 55.000 0.00 0.00 0.00 4.17
2407 7367 0.537188 TCTTTCGCCTCCTCATCACC 59.463 55.000 0.00 0.00 0.00 4.02
2408 7368 2.275318 CTTCTTTCGCCTCCTCATCAC 58.725 52.381 0.00 0.00 0.00 3.06
2409 7369 1.208052 CCTTCTTTCGCCTCCTCATCA 59.792 52.381 0.00 0.00 0.00 3.07
2410 7370 1.474143 CCCTTCTTTCGCCTCCTCATC 60.474 57.143 0.00 0.00 0.00 2.92
2411 7371 0.543749 CCCTTCTTTCGCCTCCTCAT 59.456 55.000 0.00 0.00 0.00 2.90
2412 7372 0.544357 TCCCTTCTTTCGCCTCCTCA 60.544 55.000 0.00 0.00 0.00 3.86
2413 7373 0.613777 TTCCCTTCTTTCGCCTCCTC 59.386 55.000 0.00 0.00 0.00 3.71
2414 7374 0.615850 CTTCCCTTCTTTCGCCTCCT 59.384 55.000 0.00 0.00 0.00 3.69
2415 7375 0.613777 TCTTCCCTTCTTTCGCCTCC 59.386 55.000 0.00 0.00 0.00 4.30
2416 7376 2.474410 TTCTTCCCTTCTTTCGCCTC 57.526 50.000 0.00 0.00 0.00 4.70
2417 7377 2.951229 TTTCTTCCCTTCTTTCGCCT 57.049 45.000 0.00 0.00 0.00 5.52
2418 7378 3.081804 TGATTTCTTCCCTTCTTTCGCC 58.918 45.455 0.00 0.00 0.00 5.54
2419 7379 3.424962 CGTGATTTCTTCCCTTCTTTCGC 60.425 47.826 0.00 0.00 0.00 4.70
2420 7380 3.746492 ACGTGATTTCTTCCCTTCTTTCG 59.254 43.478 0.00 0.00 0.00 3.46
2421 7381 4.515567 ACACGTGATTTCTTCCCTTCTTTC 59.484 41.667 25.01 0.00 0.00 2.62
2422 7382 4.275936 CACACGTGATTTCTTCCCTTCTTT 59.724 41.667 25.01 0.00 0.00 2.52
2423 7383 3.815401 CACACGTGATTTCTTCCCTTCTT 59.185 43.478 25.01 0.00 0.00 2.52
2424 7384 3.181454 ACACACGTGATTTCTTCCCTTCT 60.181 43.478 25.01 0.00 0.00 2.85
2425 7385 3.058914 CACACACGTGATTTCTTCCCTTC 60.059 47.826 25.01 0.00 46.80 3.46
2426 7386 2.878406 CACACACGTGATTTCTTCCCTT 59.122 45.455 25.01 0.00 46.80 3.95
2427 7387 2.494059 CACACACGTGATTTCTTCCCT 58.506 47.619 25.01 0.00 46.80 4.20
2428 7388 1.069227 GCACACACGTGATTTCTTCCC 60.069 52.381 25.01 0.00 46.80 3.97
2429 7389 1.601903 TGCACACACGTGATTTCTTCC 59.398 47.619 25.01 2.48 46.80 3.46
2430 7390 2.287915 ACTGCACACACGTGATTTCTTC 59.712 45.455 25.01 4.87 46.80 2.87
2431 7391 2.287915 GACTGCACACACGTGATTTCTT 59.712 45.455 25.01 0.00 46.80 2.52
2432 7392 1.867233 GACTGCACACACGTGATTTCT 59.133 47.619 25.01 0.00 46.80 2.52
2433 7393 1.597195 TGACTGCACACACGTGATTTC 59.403 47.619 25.01 8.98 46.80 2.17
2434 7394 1.662517 TGACTGCACACACGTGATTT 58.337 45.000 25.01 2.13 46.80 2.17
2435 7395 1.599071 CTTGACTGCACACACGTGATT 59.401 47.619 25.01 5.05 46.80 2.57
2436 7396 1.220529 CTTGACTGCACACACGTGAT 58.779 50.000 25.01 6.94 46.80 3.06
2437 7397 1.428370 GCTTGACTGCACACACGTGA 61.428 55.000 25.01 0.00 46.80 4.35
2438 7398 1.010797 GCTTGACTGCACACACGTG 60.011 57.895 15.48 15.48 46.56 4.49
2439 7399 2.525248 CGCTTGACTGCACACACGT 61.525 57.895 0.00 0.00 0.00 4.49
2440 7400 1.560004 ATCGCTTGACTGCACACACG 61.560 55.000 0.00 0.00 0.00 4.49
2441 7401 0.110509 CATCGCTTGACTGCACACAC 60.111 55.000 0.00 0.00 0.00 3.82
2442 7402 0.249826 TCATCGCTTGACTGCACACA 60.250 50.000 0.00 0.00 0.00 3.72
2443 7403 0.441533 CTCATCGCTTGACTGCACAC 59.558 55.000 0.00 0.00 0.00 3.82
2444 7404 0.671472 CCTCATCGCTTGACTGCACA 60.671 55.000 0.00 0.00 0.00 4.57
2445 7405 0.390340 TCCTCATCGCTTGACTGCAC 60.390 55.000 0.00 0.00 0.00 4.57
2446 7406 0.108472 CTCCTCATCGCTTGACTGCA 60.108 55.000 0.00 0.00 0.00 4.41
2447 7407 0.809241 CCTCCTCATCGCTTGACTGC 60.809 60.000 0.00 0.00 0.00 4.40
2448 7408 0.809241 GCCTCCTCATCGCTTGACTG 60.809 60.000 0.00 0.00 0.00 3.51
2449 7409 1.519719 GCCTCCTCATCGCTTGACT 59.480 57.895 0.00 0.00 0.00 3.41
2450 7410 1.880340 CGCCTCCTCATCGCTTGAC 60.880 63.158 0.00 0.00 0.00 3.18
2454 7414 1.142748 CTTTCGCCTCCTCATCGCT 59.857 57.895 0.00 0.00 0.00 4.93
2518 7479 2.888594 CCATTCAACTCGGTCATACGT 58.111 47.619 0.00 0.00 34.94 3.57
2616 7577 1.266175 ACTCGTACAGTGAACCTGACG 59.734 52.381 0.00 2.89 44.49 4.35
2676 7637 2.304069 GGGGTCCCCTTGACGTAAT 58.696 57.895 21.13 0.00 45.46 1.89
2936 7899 6.688073 TGGGACTGAAGAAGATAGAGTTTT 57.312 37.500 0.00 0.00 0.00 2.43
2937 7900 6.043243 TGTTGGGACTGAAGAAGATAGAGTTT 59.957 38.462 0.00 0.00 0.00 2.66
2938 7901 5.544176 TGTTGGGACTGAAGAAGATAGAGTT 59.456 40.000 0.00 0.00 0.00 3.01
2939 7902 5.046950 GTGTTGGGACTGAAGAAGATAGAGT 60.047 44.000 0.00 0.00 0.00 3.24
3000 7973 0.108329 AGGCTTCAACCGTGATACCG 60.108 55.000 0.00 0.00 35.31 4.02
3063 8036 5.690865 AGGTGATCAAAAGTTCCACTTGTA 58.309 37.500 0.00 0.00 38.66 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.