Multiple sequence alignment - TraesCS2D01G430900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G430900 chr2D 100.000 3712 0 0 1 3712 543323085 543319374 0.000000e+00 6855
1 TraesCS2D01G430900 chr2D 99.408 169 1 0 1 169 325085241 325085073 1.290000e-79 307
2 TraesCS2D01G430900 chr2D 99.408 169 1 0 1 169 469867192 469867360 1.290000e-79 307
3 TraesCS2D01G430900 chr2A 95.173 808 26 7 2918 3712 686172739 686171932 0.000000e+00 1264
4 TraesCS2D01G430900 chr2A 84.094 1314 116 48 686 1946 686175037 686173764 0.000000e+00 1182
5 TraesCS2D01G430900 chr2A 89.298 299 27 3 2131 2425 686173715 686173418 1.630000e-98 370
6 TraesCS2D01G430900 chr2A 83.401 247 22 7 168 413 686175905 686175677 1.040000e-50 211
7 TraesCS2D01G430900 chr2B 94.981 797 37 2 2918 3711 648483165 648482369 0.000000e+00 1247
8 TraesCS2D01G430900 chr2B 81.274 1319 112 63 682 1946 648485425 648484188 0.000000e+00 942
9 TraesCS2D01G430900 chr2B 90.426 282 18 7 2150 2425 648484120 648483842 2.720000e-96 363
10 TraesCS2D01G430900 chr2B 85.761 309 43 1 337 644 648485740 648485432 3.580000e-85 326
11 TraesCS2D01G430900 chr3B 86.721 610 56 7 1252 1845 314936936 314937536 0.000000e+00 654
12 TraesCS2D01G430900 chr5B 85.172 580 46 12 1291 1844 415277738 415277173 3.240000e-155 558
13 TraesCS2D01G430900 chr5B 97.191 178 4 1 1 177 446945185 446945008 2.170000e-77 300
14 TraesCS2D01G430900 chr4D 99.412 170 1 0 1 170 295603089 295603258 3.600000e-80 309
15 TraesCS2D01G430900 chr4D 98.266 173 3 0 1 173 295610641 295610813 1.680000e-78 303
16 TraesCS2D01G430900 chr3D 98.266 173 3 0 1 173 127203763 127203935 1.680000e-78 303
17 TraesCS2D01G430900 chr4A 97.727 176 3 1 3 177 13645110 13645285 6.020000e-78 302
18 TraesCS2D01G430900 chr6B 97.191 178 3 2 1 176 486374073 486373896 2.170000e-77 300
19 TraesCS2D01G430900 chr6D 96.154 182 5 2 1 180 118920612 118920431 2.800000e-76 296
20 TraesCS2D01G430900 chr3A 85.425 247 22 9 1461 1693 234511240 234511486 1.030000e-60 244


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G430900 chr2D 543319374 543323085 3711 True 6855.00 6855 100.0000 1 3712 1 chr2D.!!$R2 3711
1 TraesCS2D01G430900 chr2A 686171932 686175905 3973 True 756.75 1264 87.9915 168 3712 4 chr2A.!!$R1 3544
2 TraesCS2D01G430900 chr2B 648482369 648485740 3371 True 719.50 1247 88.1105 337 3711 4 chr2B.!!$R1 3374
3 TraesCS2D01G430900 chr3B 314936936 314937536 600 False 654.00 654 86.7210 1252 1845 1 chr3B.!!$F1 593
4 TraesCS2D01G430900 chr5B 415277173 415277738 565 True 558.00 558 85.1720 1291 1844 1 chr5B.!!$R1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
179 180 0.030235 GGCGTCACAAAACACTTCCC 59.970 55.0 0.00 0.0 0.00 3.97 F
656 1066 0.101040 CAAGGCTTGTGTGTGTGTGG 59.899 55.0 19.07 0.0 0.00 4.17 F
1994 2472 0.036010 GTCCTCACCCACACAGGATG 60.036 60.0 0.00 0.0 38.61 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1959 2437 0.108281 GGACCCAAGGTAGAAGCGAC 60.108 60.0 0.00 0.0 35.25 5.19 R
2535 3017 0.036199 CATGGGGCCAAAATGTGTGG 60.036 55.0 4.39 0.0 39.33 4.17 R
3357 4099 1.045407 AGTACAACACCTTCTCCGCA 58.955 50.0 0.00 0.0 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.284323 TCGAGCTTATGTATTCGAGCC 57.716 47.619 0.00 0.00 37.18 4.70
24 25 2.030185 TCGAGCTTATGTATTCGAGCCC 60.030 50.000 0.00 0.00 37.18 5.19
25 26 2.029828 CGAGCTTATGTATTCGAGCCCT 60.030 50.000 0.00 0.00 35.79 5.19
26 27 3.580731 GAGCTTATGTATTCGAGCCCTC 58.419 50.000 0.00 0.00 35.79 4.30
52 53 4.809673 GCCCATGGCTTGTAATATAAAGC 58.190 43.478 6.09 8.49 46.69 3.51
53 54 4.524328 GCCCATGGCTTGTAATATAAAGCT 59.476 41.667 6.09 0.00 46.69 3.74
54 55 5.011023 GCCCATGGCTTGTAATATAAAGCTT 59.989 40.000 6.09 0.00 46.69 3.74
55 56 6.449698 CCCATGGCTTGTAATATAAAGCTTG 58.550 40.000 6.09 12.16 46.42 4.01
56 57 6.040842 CCCATGGCTTGTAATATAAAGCTTGT 59.959 38.462 6.09 0.00 46.42 3.16
57 58 7.230510 CCCATGGCTTGTAATATAAAGCTTGTA 59.769 37.037 6.09 0.00 46.42 2.41
58 59 8.796475 CCATGGCTTGTAATATAAAGCTTGTAT 58.204 33.333 0.00 3.21 46.42 2.29
86 87 9.950680 ATTTTATTTGTGTCTAGAGTTGTGTTG 57.049 29.630 0.00 0.00 0.00 3.33
87 88 8.500753 TTTATTTGTGTCTAGAGTTGTGTTGT 57.499 30.769 0.00 0.00 0.00 3.32
88 89 5.794687 TTTGTGTCTAGAGTTGTGTTGTG 57.205 39.130 0.00 0.00 0.00 3.33
89 90 4.729227 TGTGTCTAGAGTTGTGTTGTGA 57.271 40.909 0.00 0.00 0.00 3.58
90 91 5.276461 TGTGTCTAGAGTTGTGTTGTGAT 57.724 39.130 0.00 0.00 0.00 3.06
91 92 6.399639 TGTGTCTAGAGTTGTGTTGTGATA 57.600 37.500 0.00 0.00 0.00 2.15
92 93 6.993079 TGTGTCTAGAGTTGTGTTGTGATAT 58.007 36.000 0.00 0.00 0.00 1.63
93 94 7.090808 TGTGTCTAGAGTTGTGTTGTGATATC 58.909 38.462 0.00 0.00 0.00 1.63
94 95 7.039714 TGTGTCTAGAGTTGTGTTGTGATATCT 60.040 37.037 3.98 0.00 0.00 1.98
95 96 7.815068 GTGTCTAGAGTTGTGTTGTGATATCTT 59.185 37.037 3.98 0.00 0.00 2.40
96 97 8.029522 TGTCTAGAGTTGTGTTGTGATATCTTC 58.970 37.037 3.98 0.00 0.00 2.87
97 98 7.489757 GTCTAGAGTTGTGTTGTGATATCTTCC 59.510 40.741 3.98 0.00 0.00 3.46
98 99 5.491982 AGAGTTGTGTTGTGATATCTTCCC 58.508 41.667 3.98 0.00 0.00 3.97
99 100 4.253685 AGTTGTGTTGTGATATCTTCCCG 58.746 43.478 3.98 0.00 0.00 5.14
100 101 3.973206 TGTGTTGTGATATCTTCCCGT 57.027 42.857 3.98 0.00 0.00 5.28
101 102 3.595173 TGTGTTGTGATATCTTCCCGTG 58.405 45.455 3.98 0.00 0.00 4.94
102 103 3.259625 TGTGTTGTGATATCTTCCCGTGA 59.740 43.478 3.98 0.00 0.00 4.35
103 104 3.865745 GTGTTGTGATATCTTCCCGTGAG 59.134 47.826 3.98 0.00 0.00 3.51
104 105 3.513912 TGTTGTGATATCTTCCCGTGAGT 59.486 43.478 3.98 0.00 0.00 3.41
105 106 4.113354 GTTGTGATATCTTCCCGTGAGTC 58.887 47.826 3.98 0.00 0.00 3.36
106 107 2.693591 TGTGATATCTTCCCGTGAGTCC 59.306 50.000 3.98 0.00 0.00 3.85
107 108 2.959707 GTGATATCTTCCCGTGAGTCCT 59.040 50.000 3.98 0.00 0.00 3.85
108 109 3.385111 GTGATATCTTCCCGTGAGTCCTT 59.615 47.826 3.98 0.00 0.00 3.36
109 110 3.384789 TGATATCTTCCCGTGAGTCCTTG 59.615 47.826 3.98 0.00 0.00 3.61
110 111 1.938585 ATCTTCCCGTGAGTCCTTGA 58.061 50.000 0.00 0.00 0.00 3.02
111 112 1.938585 TCTTCCCGTGAGTCCTTGAT 58.061 50.000 0.00 0.00 0.00 2.57
112 113 1.825474 TCTTCCCGTGAGTCCTTGATC 59.175 52.381 0.00 0.00 0.00 2.92
113 114 1.827969 CTTCCCGTGAGTCCTTGATCT 59.172 52.381 0.00 0.00 0.00 2.75
114 115 1.938585 TCCCGTGAGTCCTTGATCTT 58.061 50.000 0.00 0.00 0.00 2.40
115 116 1.550524 TCCCGTGAGTCCTTGATCTTG 59.449 52.381 0.00 0.00 0.00 3.02
116 117 1.550524 CCCGTGAGTCCTTGATCTTGA 59.449 52.381 0.00 0.00 0.00 3.02
117 118 2.169352 CCCGTGAGTCCTTGATCTTGAT 59.831 50.000 0.00 0.00 0.00 2.57
118 119 3.452474 CCGTGAGTCCTTGATCTTGATC 58.548 50.000 3.82 3.82 0.00 2.92
119 120 3.118992 CCGTGAGTCCTTGATCTTGATCA 60.119 47.826 9.02 9.02 0.00 2.92
120 121 4.442612 CCGTGAGTCCTTGATCTTGATCAT 60.443 45.833 13.26 0.00 0.00 2.45
121 122 5.221322 CCGTGAGTCCTTGATCTTGATCATA 60.221 44.000 13.26 5.18 0.00 2.15
122 123 5.689514 CGTGAGTCCTTGATCTTGATCATAC 59.310 44.000 13.26 11.68 0.00 2.39
123 124 6.577103 GTGAGTCCTTGATCTTGATCATACA 58.423 40.000 13.26 6.16 0.00 2.29
124 125 6.478344 GTGAGTCCTTGATCTTGATCATACAC 59.522 42.308 13.26 9.95 0.00 2.90
125 126 6.155049 TGAGTCCTTGATCTTGATCATACACA 59.845 38.462 13.26 12.77 0.00 3.72
126 127 7.134362 AGTCCTTGATCTTGATCATACACAT 57.866 36.000 13.26 0.00 0.00 3.21
127 128 7.571919 AGTCCTTGATCTTGATCATACACATT 58.428 34.615 13.26 0.00 0.00 2.71
128 129 8.051535 AGTCCTTGATCTTGATCATACACATTT 58.948 33.333 13.26 0.00 0.00 2.32
129 130 8.127327 GTCCTTGATCTTGATCATACACATTTG 58.873 37.037 13.26 0.00 0.00 2.32
130 131 6.916387 CCTTGATCTTGATCATACACATTTGC 59.084 38.462 13.26 0.00 0.00 3.68
131 132 6.051646 TGATCTTGATCATACACATTTGCG 57.948 37.500 9.02 0.00 0.00 4.85
132 133 5.585844 TGATCTTGATCATACACATTTGCGT 59.414 36.000 9.02 0.00 0.00 5.24
133 134 5.220557 TCTTGATCATACACATTTGCGTG 57.779 39.130 0.00 0.00 42.81 5.34
145 146 5.868257 CACATTTGCGTGTATGATTAGTGT 58.132 37.500 0.00 0.00 32.00 3.55
146 147 6.999456 CACATTTGCGTGTATGATTAGTGTA 58.001 36.000 0.00 0.00 32.00 2.90
147 148 6.899771 CACATTTGCGTGTATGATTAGTGTAC 59.100 38.462 0.00 0.00 32.00 2.90
148 149 5.689927 TTTGCGTGTATGATTAGTGTACG 57.310 39.130 0.00 0.00 0.00 3.67
149 150 4.619437 TGCGTGTATGATTAGTGTACGA 57.381 40.909 0.00 0.00 32.36 3.43
150 151 5.177725 TGCGTGTATGATTAGTGTACGAT 57.822 39.130 0.00 0.00 32.36 3.73
151 152 5.584442 TGCGTGTATGATTAGTGTACGATT 58.416 37.500 0.00 0.00 32.36 3.34
152 153 5.457473 TGCGTGTATGATTAGTGTACGATTG 59.543 40.000 0.00 0.00 32.36 2.67
153 154 5.684184 GCGTGTATGATTAGTGTACGATTGA 59.316 40.000 0.00 0.00 32.36 2.57
154 155 6.197655 GCGTGTATGATTAGTGTACGATTGAA 59.802 38.462 0.00 0.00 32.36 2.69
155 156 7.096189 GCGTGTATGATTAGTGTACGATTGAAT 60.096 37.037 0.00 0.00 32.36 2.57
156 157 8.417928 CGTGTATGATTAGTGTACGATTGAATC 58.582 37.037 0.00 0.00 32.36 2.52
166 167 3.362581 GATTGAATCGAGGGCGTCA 57.637 52.632 8.06 0.00 38.98 4.35
167 168 0.931005 GATTGAATCGAGGGCGTCAC 59.069 55.000 8.06 0.00 38.98 3.67
168 169 0.249120 ATTGAATCGAGGGCGTCACA 59.751 50.000 8.06 0.00 38.98 3.58
169 170 0.034198 TTGAATCGAGGGCGTCACAA 59.966 50.000 8.06 5.28 38.98 3.33
170 171 0.034198 TGAATCGAGGGCGTCACAAA 59.966 50.000 8.06 0.00 38.98 2.83
171 172 1.153353 GAATCGAGGGCGTCACAAAA 58.847 50.000 8.06 0.00 38.98 2.44
179 180 0.030235 GGCGTCACAAAACACTTCCC 59.970 55.000 0.00 0.00 0.00 3.97
185 186 1.403679 CACAAAACACTTCCCGAGCAA 59.596 47.619 0.00 0.00 0.00 3.91
189 190 1.705997 AACACTTCCCGAGCAACCCT 61.706 55.000 0.00 0.00 0.00 4.34
192 193 1.376037 CTTCCCGAGCAACCCTGTC 60.376 63.158 0.00 0.00 0.00 3.51
193 194 3.234630 TTCCCGAGCAACCCTGTCG 62.235 63.158 0.00 0.00 0.00 4.35
209 210 9.072294 CAACCCTGTCGAAAACATTTAAATATC 57.928 33.333 0.00 0.00 37.23 1.63
210 211 7.768240 ACCCTGTCGAAAACATTTAAATATCC 58.232 34.615 0.00 0.00 37.23 2.59
213 214 7.432252 CCTGTCGAAAACATTTAAATATCCTGC 59.568 37.037 0.00 0.00 37.23 4.85
218 219 8.920665 CGAAAACATTTAAATATCCTGCAACAA 58.079 29.630 0.00 0.00 0.00 2.83
222 223 8.633075 ACATTTAAATATCCTGCAACAATTCG 57.367 30.769 0.00 0.00 0.00 3.34
266 267 0.395586 GGGCATGCAACACATCCCTA 60.396 55.000 21.36 0.00 36.74 3.53
273 274 5.682990 GCATGCAACACATCCCTATTCATTT 60.683 40.000 14.21 0.00 36.64 2.32
274 275 5.327616 TGCAACACATCCCTATTCATTTG 57.672 39.130 0.00 0.00 0.00 2.32
275 276 5.015515 TGCAACACATCCCTATTCATTTGA 58.984 37.500 0.00 0.00 0.00 2.69
276 277 5.479724 TGCAACACATCCCTATTCATTTGAA 59.520 36.000 0.00 0.00 38.56 2.69
277 278 6.014755 TGCAACACATCCCTATTCATTTGAAA 60.015 34.615 0.00 0.00 37.61 2.69
278 279 6.873076 GCAACACATCCCTATTCATTTGAAAA 59.127 34.615 0.00 0.00 37.61 2.29
279 280 7.148590 GCAACACATCCCTATTCATTTGAAAAC 60.149 37.037 0.00 0.00 37.61 2.43
280 281 7.537596 ACACATCCCTATTCATTTGAAAACA 57.462 32.000 0.00 0.00 37.61 2.83
281 282 8.137745 ACACATCCCTATTCATTTGAAAACAT 57.862 30.769 0.00 0.00 37.61 2.71
282 283 8.596293 ACACATCCCTATTCATTTGAAAACATT 58.404 29.630 0.00 0.00 37.61 2.71
297 298 5.751028 TGAAAACATTAAAAAGGTTCCGCAG 59.249 36.000 0.00 0.00 0.00 5.18
325 326 9.425893 GATACAATATGAAACTGAACACAATCG 57.574 33.333 0.00 0.00 0.00 3.34
330 331 5.749596 TGAAACTGAACACAATCGACAAT 57.250 34.783 0.00 0.00 0.00 2.71
335 336 4.816385 ACTGAACACAATCGACAATTGAGT 59.184 37.500 13.59 0.00 46.88 3.41
339 340 8.185003 TGAACACAATCGACAATTGAGTATAG 57.815 34.615 13.59 0.49 45.00 1.31
362 364 4.327898 GCACATGCAACAATGAAATACAGG 59.672 41.667 0.00 0.00 41.59 4.00
376 378 9.912634 AATGAAATACAGGTTCACAAACATTAG 57.087 29.630 0.00 0.00 37.80 1.73
394 396 8.964420 AACATTAGTTTTTCGGAATACACATG 57.036 30.769 0.00 3.97 33.11 3.21
421 423 4.018649 TCATTGCAACATAACGCTCATG 57.981 40.909 0.00 0.00 0.00 3.07
448 450 3.629142 AACCTTCGAAGTGGATAAGGG 57.371 47.619 23.03 8.45 42.34 3.95
449 451 2.829023 ACCTTCGAAGTGGATAAGGGA 58.171 47.619 23.03 0.00 42.34 4.20
450 452 3.385115 ACCTTCGAAGTGGATAAGGGAT 58.615 45.455 23.03 0.00 42.34 3.85
484 894 1.830408 CCGGCCTTTGGTGGTTCAA 60.830 57.895 0.00 0.00 0.00 2.69
492 902 0.884704 TTGGTGGTTCAAGCTCGCTC 60.885 55.000 0.00 0.00 0.00 5.03
493 903 1.301716 GGTGGTTCAAGCTCGCTCA 60.302 57.895 0.00 0.00 0.00 4.26
528 938 4.262938 GCTAGACTAGTTGACCCCAAACTT 60.263 45.833 11.15 0.00 33.49 2.66
591 1001 2.031682 GTGCACTTTCACATCGAGCTTT 60.032 45.455 10.32 0.00 36.97 3.51
644 1054 1.470098 CGTAAGCTTGATGCAAGGCTT 59.530 47.619 9.86 11.85 45.94 4.35
645 1055 2.730090 CGTAAGCTTGATGCAAGGCTTG 60.730 50.000 22.75 22.75 45.94 4.01
646 1056 1.335145 AAGCTTGATGCAAGGCTTGT 58.665 45.000 26.71 9.60 45.94 3.16
648 1058 0.316204 GCTTGATGCAAGGCTTGTGT 59.684 50.000 26.71 16.29 41.31 3.72
649 1059 1.933500 GCTTGATGCAAGGCTTGTGTG 60.934 52.381 26.71 12.96 41.31 3.82
650 1060 1.338973 CTTGATGCAAGGCTTGTGTGT 59.661 47.619 26.71 11.52 37.77 3.72
652 1062 0.670162 GATGCAAGGCTTGTGTGTGT 59.330 50.000 26.71 8.21 0.00 3.72
653 1063 0.386476 ATGCAAGGCTTGTGTGTGTG 59.614 50.000 26.71 1.46 0.00 3.82
654 1064 0.964860 TGCAAGGCTTGTGTGTGTGT 60.965 50.000 26.71 0.00 0.00 3.72
655 1065 0.526096 GCAAGGCTTGTGTGTGTGTG 60.526 55.000 26.71 0.00 0.00 3.82
656 1066 0.101040 CAAGGCTTGTGTGTGTGTGG 59.899 55.000 19.07 0.00 0.00 4.17
657 1067 1.037030 AAGGCTTGTGTGTGTGTGGG 61.037 55.000 0.00 0.00 0.00 4.61
658 1068 1.752694 GGCTTGTGTGTGTGTGGGT 60.753 57.895 0.00 0.00 0.00 4.51
659 1069 1.433064 GCTTGTGTGTGTGTGGGTG 59.567 57.895 0.00 0.00 0.00 4.61
660 1070 2.003658 GCTTGTGTGTGTGTGGGTGG 62.004 60.000 0.00 0.00 0.00 4.61
661 1071 1.379176 TTGTGTGTGTGTGGGTGGG 60.379 57.895 0.00 0.00 0.00 4.61
662 1072 2.143575 TTGTGTGTGTGTGGGTGGGT 62.144 55.000 0.00 0.00 0.00 4.51
663 1073 2.118404 GTGTGTGTGTGGGTGGGTG 61.118 63.158 0.00 0.00 0.00 4.61
664 1074 2.518349 GTGTGTGTGGGTGGGTGG 60.518 66.667 0.00 0.00 0.00 4.61
665 1075 3.814906 TGTGTGTGGGTGGGTGGG 61.815 66.667 0.00 0.00 0.00 4.61
666 1076 3.816090 GTGTGTGGGTGGGTGGGT 61.816 66.667 0.00 0.00 0.00 4.51
667 1077 3.814906 TGTGTGGGTGGGTGGGTG 61.815 66.667 0.00 0.00 0.00 4.61
711 1121 1.827344 AGATGATGAGGTTCGAGCACA 59.173 47.619 0.53 1.20 0.00 4.57
723 1133 1.073964 CGAGCACACATGGAAGTGAG 58.926 55.000 16.31 5.74 42.05 3.51
729 1139 3.854666 CACACATGGAAGTGAGGTAGAG 58.145 50.000 8.91 0.00 42.05 2.43
739 1149 5.338544 GGAAGTGAGGTAGAGAGTCAGTCTA 60.339 48.000 0.00 0.00 34.71 2.59
773 1183 3.042682 TCCATGCCGACCTCCTAAATAA 58.957 45.455 0.00 0.00 0.00 1.40
778 1188 2.872858 GCCGACCTCCTAAATAAAGCAG 59.127 50.000 0.00 0.00 0.00 4.24
802 1212 7.818446 CAGATAGGATAAAGGACACATGATGAG 59.182 40.741 0.00 0.00 0.00 2.90
805 1215 6.590068 AGGATAAAGGACACATGATGAGAAG 58.410 40.000 0.00 0.00 0.00 2.85
815 1225 2.462456 TGATGAGAAGCACACCAGAC 57.538 50.000 0.00 0.00 0.00 3.51
888 1298 4.380444 GCACTGGAGTTCTGTTCAAAAACA 60.380 41.667 0.00 0.00 43.06 2.83
901 1311 7.171167 TCTGTTCAAAAACATTATACGACCGAA 59.829 33.333 0.00 0.00 44.18 4.30
937 1348 4.985538 ACATGTTGGACCTAATCAACTGT 58.014 39.130 0.00 0.00 42.48 3.55
950 1361 4.927267 ATCAACTGTTCCTATTGGGTGA 57.073 40.909 0.00 0.00 36.25 4.02
951 1362 4.715534 TCAACTGTTCCTATTGGGTGAA 57.284 40.909 0.00 0.00 36.25 3.18
967 1378 5.898120 TGGGTGAAAAGGGAATCATTTCTA 58.102 37.500 0.00 0.00 34.84 2.10
1109 1521 1.294780 CTCCTGCCTCTTCGCTTGT 59.705 57.895 0.00 0.00 0.00 3.16
1123 1535 3.695022 CTTGTCGTCCCCCGTAGCG 62.695 68.421 0.00 0.00 37.94 4.26
1513 1936 5.104485 ACAAGTTGTTTACAGTTCTCTCCCT 60.104 40.000 1.64 0.00 0.00 4.20
1537 1973 9.323985 CCTCTAACTTCAGAATCTGATAAAAGG 57.676 37.037 14.31 11.86 40.39 3.11
1631 2069 2.012673 GCTGGCTGGTTAGTTCATGAG 58.987 52.381 0.00 0.00 0.00 2.90
1640 2078 3.378427 GGTTAGTTCATGAGGCCATTCAC 59.622 47.826 5.01 0.00 0.00 3.18
1715 2189 2.935740 GCTTGGCCCAGTTTGGAGC 61.936 63.158 5.61 0.00 40.96 4.70
1721 2195 0.609131 GCCCAGTTTGGAGCTGCTTA 60.609 55.000 6.82 0.00 40.96 3.09
1802 2279 5.387342 GCGATGTCTTGAAAATTGGAAAACG 60.387 40.000 0.00 0.00 0.00 3.60
1806 2283 6.033341 TGTCTTGAAAATTGGAAAACGTCTG 58.967 36.000 0.00 0.00 0.00 3.51
1807 2284 6.127869 TGTCTTGAAAATTGGAAAACGTCTGA 60.128 34.615 0.00 0.00 0.00 3.27
1808 2285 6.196538 GTCTTGAAAATTGGAAAACGTCTGAC 59.803 38.462 0.00 0.00 0.00 3.51
1809 2286 5.828299 TGAAAATTGGAAAACGTCTGACT 57.172 34.783 6.21 0.00 0.00 3.41
1810 2287 6.202516 TGAAAATTGGAAAACGTCTGACTT 57.797 33.333 6.21 0.00 0.00 3.01
1811 2288 6.033341 TGAAAATTGGAAAACGTCTGACTTG 58.967 36.000 6.21 0.00 0.00 3.16
1812 2289 4.568152 AATTGGAAAACGTCTGACTTGG 57.432 40.909 6.21 0.00 0.00 3.61
1813 2290 2.702592 TGGAAAACGTCTGACTTGGT 57.297 45.000 6.21 0.00 0.00 3.67
1814 2291 3.823281 TGGAAAACGTCTGACTTGGTA 57.177 42.857 6.21 0.00 0.00 3.25
1847 2324 6.111382 TCTTTATCTGAGAAGATGCTTGTGG 58.889 40.000 0.00 0.00 0.00 4.17
1849 2327 1.980765 TCTGAGAAGATGCTTGTGGGT 59.019 47.619 0.00 0.00 0.00 4.51
1874 2352 7.385205 GTCACAATATGATACTGGTATGTCCAC 59.615 40.741 0.00 0.00 39.57 4.02
1875 2353 7.290014 TCACAATATGATACTGGTATGTCCACT 59.710 37.037 0.00 0.00 35.02 4.00
1877 2355 4.855715 ATGATACTGGTATGTCCACTCG 57.144 45.455 0.00 0.00 41.93 4.18
1896 2374 7.773224 TCCACTCGACAATGTATAAATTTGGAT 59.227 33.333 0.00 0.00 0.00 3.41
1897 2375 8.405531 CCACTCGACAATGTATAAATTTGGATT 58.594 33.333 0.00 0.00 0.00 3.01
1918 2396 2.897969 TCCCCAAGTACAACTCTCTGTC 59.102 50.000 0.00 0.00 0.00 3.51
1920 2398 3.306364 CCCCAAGTACAACTCTCTGTCAG 60.306 52.174 0.00 0.00 0.00 3.51
1922 2400 3.322254 CCAAGTACAACTCTCTGTCAGGT 59.678 47.826 0.00 0.00 0.00 4.00
1937 2415 5.009610 TCTGTCAGGTTGGTGCTTAATTTTC 59.990 40.000 0.00 0.00 0.00 2.29
1938 2416 4.646945 TGTCAGGTTGGTGCTTAATTTTCA 59.353 37.500 0.00 0.00 0.00 2.69
1942 2420 4.996758 AGGTTGGTGCTTAATTTTCATTGC 59.003 37.500 0.00 0.00 0.00 3.56
1943 2421 4.996758 GGTTGGTGCTTAATTTTCATTGCT 59.003 37.500 0.00 0.00 0.00 3.91
1945 2423 6.648725 GGTTGGTGCTTAATTTTCATTGCTTA 59.351 34.615 0.00 0.00 0.00 3.09
1946 2424 7.360017 GGTTGGTGCTTAATTTTCATTGCTTAC 60.360 37.037 0.00 0.00 0.00 2.34
1947 2425 6.991938 TGGTGCTTAATTTTCATTGCTTACT 58.008 32.000 0.00 0.00 0.00 2.24
1948 2426 7.441017 TGGTGCTTAATTTTCATTGCTTACTT 58.559 30.769 0.00 0.00 0.00 2.24
1949 2427 7.598493 TGGTGCTTAATTTTCATTGCTTACTTC 59.402 33.333 0.00 0.00 0.00 3.01
1950 2428 7.814587 GGTGCTTAATTTTCATTGCTTACTTCT 59.185 33.333 0.00 0.00 0.00 2.85
1951 2429 8.642020 GTGCTTAATTTTCATTGCTTACTTCTG 58.358 33.333 0.00 0.00 0.00 3.02
1952 2430 7.329226 TGCTTAATTTTCATTGCTTACTTCTGC 59.671 33.333 0.00 0.00 0.00 4.26
1953 2431 7.543520 GCTTAATTTTCATTGCTTACTTCTGCT 59.456 33.333 0.00 0.00 0.00 4.24
1955 2433 7.880059 AATTTTCATTGCTTACTTCTGCTTC 57.120 32.000 0.00 0.00 0.00 3.86
1956 2434 6.389830 TTTTCATTGCTTACTTCTGCTTCA 57.610 33.333 0.00 0.00 0.00 3.02
1957 2435 6.579666 TTTCATTGCTTACTTCTGCTTCAT 57.420 33.333 0.00 0.00 0.00 2.57
1958 2436 6.579666 TTCATTGCTTACTTCTGCTTCATT 57.420 33.333 0.00 0.00 0.00 2.57
1959 2437 5.946298 TCATTGCTTACTTCTGCTTCATTG 58.054 37.500 0.00 0.00 0.00 2.82
1960 2438 5.474532 TCATTGCTTACTTCTGCTTCATTGT 59.525 36.000 0.00 0.00 0.00 2.71
1961 2439 5.362556 TTGCTTACTTCTGCTTCATTGTC 57.637 39.130 0.00 0.00 0.00 3.18
1962 2440 3.433274 TGCTTACTTCTGCTTCATTGTCG 59.567 43.478 0.00 0.00 0.00 4.35
1963 2441 3.726190 GCTTACTTCTGCTTCATTGTCGC 60.726 47.826 0.00 0.00 0.00 5.19
1964 2442 2.175878 ACTTCTGCTTCATTGTCGCT 57.824 45.000 0.00 0.00 0.00 4.93
1965 2443 2.498167 ACTTCTGCTTCATTGTCGCTT 58.502 42.857 0.00 0.00 0.00 4.68
1966 2444 2.481952 ACTTCTGCTTCATTGTCGCTTC 59.518 45.455 0.00 0.00 0.00 3.86
1968 2446 3.592898 TCTGCTTCATTGTCGCTTCTA 57.407 42.857 0.00 0.00 0.00 2.10
1969 2447 3.254060 TCTGCTTCATTGTCGCTTCTAC 58.746 45.455 0.00 0.00 0.00 2.59
1970 2448 2.346803 TGCTTCATTGTCGCTTCTACC 58.653 47.619 0.00 0.00 0.00 3.18
1971 2449 2.028112 TGCTTCATTGTCGCTTCTACCT 60.028 45.455 0.00 0.00 0.00 3.08
1972 2450 3.003480 GCTTCATTGTCGCTTCTACCTT 58.997 45.455 0.00 0.00 0.00 3.50
1973 2451 3.181516 GCTTCATTGTCGCTTCTACCTTG 60.182 47.826 0.00 0.00 0.00 3.61
1974 2452 2.972625 TCATTGTCGCTTCTACCTTGG 58.027 47.619 0.00 0.00 0.00 3.61
1976 2454 1.053424 TTGTCGCTTCTACCTTGGGT 58.947 50.000 0.00 0.00 40.16 4.51
1977 2455 0.606604 TGTCGCTTCTACCTTGGGTC 59.393 55.000 0.00 0.00 37.09 4.46
1980 2458 0.175989 CGCTTCTACCTTGGGTCCTC 59.824 60.000 0.00 0.00 37.09 3.71
1981 2459 1.276622 GCTTCTACCTTGGGTCCTCA 58.723 55.000 0.00 0.00 37.09 3.86
1982 2460 1.066071 GCTTCTACCTTGGGTCCTCAC 60.066 57.143 0.00 0.00 37.09 3.51
1983 2461 1.555533 CTTCTACCTTGGGTCCTCACC 59.444 57.143 0.00 0.00 42.90 4.02
1992 2470 1.841556 GGTCCTCACCCACACAGGA 60.842 63.158 0.00 0.00 41.22 3.86
1993 2471 1.201429 GGTCCTCACCCACACAGGAT 61.201 60.000 0.00 0.00 38.61 3.24
1994 2472 0.036010 GTCCTCACCCACACAGGATG 60.036 60.000 0.00 0.00 38.61 3.51
2007 2485 1.972872 CAGGATGTGGATGGGTTAGC 58.027 55.000 0.00 0.00 0.00 3.09
2008 2486 0.846693 AGGATGTGGATGGGTTAGCC 59.153 55.000 0.00 0.00 34.64 3.93
2030 2508 2.514458 GGGGGTGACTGATGATTTGT 57.486 50.000 0.00 0.00 0.00 2.83
2031 2509 3.644966 GGGGGTGACTGATGATTTGTA 57.355 47.619 0.00 0.00 0.00 2.41
2032 2510 3.963129 GGGGGTGACTGATGATTTGTAA 58.037 45.455 0.00 0.00 0.00 2.41
2033 2511 3.694566 GGGGGTGACTGATGATTTGTAAC 59.305 47.826 0.00 0.00 0.00 2.50
2034 2512 4.331968 GGGGTGACTGATGATTTGTAACA 58.668 43.478 0.00 0.00 0.00 2.41
2035 2513 4.949856 GGGGTGACTGATGATTTGTAACAT 59.050 41.667 0.00 0.00 0.00 2.71
2036 2514 6.119536 GGGGTGACTGATGATTTGTAACATA 58.880 40.000 0.00 0.00 0.00 2.29
2037 2515 6.260936 GGGGTGACTGATGATTTGTAACATAG 59.739 42.308 0.00 0.00 0.00 2.23
2038 2516 6.238484 GGGTGACTGATGATTTGTAACATAGC 60.238 42.308 0.00 0.00 0.00 2.97
2039 2517 6.316140 GGTGACTGATGATTTGTAACATAGCA 59.684 38.462 0.00 0.00 0.00 3.49
2040 2518 7.012704 GGTGACTGATGATTTGTAACATAGCAT 59.987 37.037 0.00 0.00 0.00 3.79
2041 2519 7.854422 GTGACTGATGATTTGTAACATAGCATG 59.146 37.037 0.00 0.00 0.00 4.06
2043 2521 8.962884 ACTGATGATTTGTAACATAGCATGTA 57.037 30.769 0.00 0.00 44.07 2.29
2044 2522 9.394767 ACTGATGATTTGTAACATAGCATGTAA 57.605 29.630 0.00 0.00 44.07 2.41
2053 2531 9.456147 TTGTAACATAGCATGTAATTACCTTGT 57.544 29.630 13.01 2.23 44.07 3.16
2062 2540 8.250332 AGCATGTAATTACCTTGTAAATGTTGG 58.750 33.333 13.01 0.00 0.00 3.77
2063 2541 7.010091 GCATGTAATTACCTTGTAAATGTTGGC 59.990 37.037 13.01 0.00 0.00 4.52
2064 2542 7.768807 TGTAATTACCTTGTAAATGTTGGCT 57.231 32.000 13.01 0.00 0.00 4.75
2065 2543 8.865420 TGTAATTACCTTGTAAATGTTGGCTA 57.135 30.769 13.01 0.00 0.00 3.93
2066 2544 9.469097 TGTAATTACCTTGTAAATGTTGGCTAT 57.531 29.630 13.01 0.00 0.00 2.97
2080 2558 9.981114 AAATGTTGGCTATTAAATATACAAGGC 57.019 29.630 0.00 0.00 0.00 4.35
2081 2559 8.704849 ATGTTGGCTATTAAATATACAAGGCA 57.295 30.769 0.00 0.00 37.69 4.75
2082 2560 8.165239 TGTTGGCTATTAAATATACAAGGCAG 57.835 34.615 0.00 0.00 40.10 4.85
2083 2561 7.777910 TGTTGGCTATTAAATATACAAGGCAGT 59.222 33.333 0.00 0.00 40.10 4.40
2084 2562 7.744087 TGGCTATTAAATATACAAGGCAGTG 57.256 36.000 0.00 0.00 34.98 3.66
2085 2563 6.714810 TGGCTATTAAATATACAAGGCAGTGG 59.285 38.462 0.00 0.00 34.98 4.00
2086 2564 6.151144 GGCTATTAAATATACAAGGCAGTGGG 59.849 42.308 0.00 0.00 0.00 4.61
2087 2565 6.940298 GCTATTAAATATACAAGGCAGTGGGA 59.060 38.462 0.00 0.00 0.00 4.37
2088 2566 7.119846 GCTATTAAATATACAAGGCAGTGGGAG 59.880 40.741 0.00 0.00 0.00 4.30
2089 2567 6.569127 TTAAATATACAAGGCAGTGGGAGA 57.431 37.500 0.00 0.00 0.00 3.71
2090 2568 4.423625 AATATACAAGGCAGTGGGAGAC 57.576 45.455 0.00 0.00 0.00 3.36
2091 2569 1.958288 ATACAAGGCAGTGGGAGACT 58.042 50.000 0.00 0.00 34.02 3.24
2092 2570 1.267121 TACAAGGCAGTGGGAGACTC 58.733 55.000 0.00 0.00 29.75 3.36
2093 2571 0.472734 ACAAGGCAGTGGGAGACTCT 60.473 55.000 1.74 0.00 29.75 3.24
2094 2572 0.248843 CAAGGCAGTGGGAGACTCTC 59.751 60.000 1.74 0.00 29.75 3.20
2105 2583 3.359695 GGAGACTCTCCTACTGTCAGT 57.640 52.381 16.91 10.99 46.41 3.41
2106 2584 3.013921 GGAGACTCTCCTACTGTCAGTG 58.986 54.545 16.91 5.69 46.41 3.66
2107 2585 2.422127 GAGACTCTCCTACTGTCAGTGC 59.578 54.545 16.03 0.00 33.56 4.40
2108 2586 2.163509 GACTCTCCTACTGTCAGTGCA 58.836 52.381 16.03 0.00 0.00 4.57
2109 2587 2.757868 GACTCTCCTACTGTCAGTGCAT 59.242 50.000 16.03 0.00 0.00 3.96
2110 2588 2.495270 ACTCTCCTACTGTCAGTGCATG 59.505 50.000 16.03 3.98 0.00 4.06
2111 2589 2.495270 CTCTCCTACTGTCAGTGCATGT 59.505 50.000 16.03 0.00 0.00 3.21
2112 2590 2.899900 TCTCCTACTGTCAGTGCATGTT 59.100 45.455 16.03 0.00 0.00 2.71
2113 2591 3.056536 TCTCCTACTGTCAGTGCATGTTC 60.057 47.826 16.03 0.00 0.00 3.18
2114 2592 2.632512 TCCTACTGTCAGTGCATGTTCA 59.367 45.455 16.03 0.00 0.00 3.18
2115 2593 3.070878 TCCTACTGTCAGTGCATGTTCAA 59.929 43.478 16.03 0.00 0.00 2.69
2116 2594 3.814842 CCTACTGTCAGTGCATGTTCAAA 59.185 43.478 16.03 0.00 0.00 2.69
2117 2595 4.275689 CCTACTGTCAGTGCATGTTCAAAA 59.724 41.667 16.03 0.00 0.00 2.44
2118 2596 4.717233 ACTGTCAGTGCATGTTCAAAAA 57.283 36.364 4.21 0.00 0.00 1.94
2144 2622 5.437289 TTCTGTGTTTCTAACCTGCATTG 57.563 39.130 0.00 0.00 0.00 2.82
2145 2623 4.460263 TCTGTGTTTCTAACCTGCATTGT 58.540 39.130 0.00 0.00 0.00 2.71
2147 2625 5.468746 TCTGTGTTTCTAACCTGCATTGTAC 59.531 40.000 0.00 0.00 0.00 2.90
2148 2626 5.126779 TGTGTTTCTAACCTGCATTGTACA 58.873 37.500 0.00 0.00 0.00 2.90
2159 2637 6.003950 ACCTGCATTGTACACTTCTTGTTAT 58.996 36.000 0.00 0.00 39.91 1.89
2161 2639 5.698832 TGCATTGTACACTTCTTGTTATGC 58.301 37.500 13.77 13.77 41.72 3.14
2171 2649 2.265367 TCTTGTTATGCCCTGACTGGA 58.735 47.619 0.00 0.00 38.35 3.86
2172 2650 2.237143 TCTTGTTATGCCCTGACTGGAG 59.763 50.000 0.00 0.00 38.35 3.86
2185 2667 6.653989 CCCTGACTGGAGTATTAGTTTCATT 58.346 40.000 0.00 0.00 38.35 2.57
2211 2693 6.730447 TCATTAATCCCTGTTTTGATCTGGA 58.270 36.000 0.00 0.00 0.00 3.86
2214 2696 9.305555 CATTAATCCCTGTTTTGATCTGGATAT 57.694 33.333 0.00 0.00 0.00 1.63
2225 2707 9.206870 GTTTTGATCTGGATATCTTTTTGCAAA 57.793 29.630 8.05 8.05 0.00 3.68
2252 2734 1.786441 ACATTGGAGGTGAAAGGGGAA 59.214 47.619 0.00 0.00 0.00 3.97
2268 2750 1.609072 GGGAAACACAGCTGAAGAACC 59.391 52.381 23.35 16.61 0.00 3.62
2291 2773 1.163554 CTGAGAAACTGGAAGCAGCC 58.836 55.000 0.00 0.00 37.60 4.85
2297 2779 2.743928 CTGGAAGCAGCCGGTGTC 60.744 66.667 1.90 0.00 0.00 3.67
2354 2836 1.717937 GACTTGCATAGCCACAGCG 59.282 57.895 0.00 0.00 46.67 5.18
2387 2869 0.992802 CGCAGGTAGCTTCGTTCTTC 59.007 55.000 5.79 0.00 42.61 2.87
2419 2901 7.812669 GCTAAAGCTTTGCAAATAACCTAAGAA 59.187 33.333 22.02 0.00 38.21 2.52
2442 2924 8.601546 AGAATAATATTGATCCTTGTCTCCTCC 58.398 37.037 0.00 0.00 0.00 4.30
2446 2928 3.776731 TGATCCTTGTCTCCTCCCTTA 57.223 47.619 0.00 0.00 0.00 2.69
2447 2929 3.375699 TGATCCTTGTCTCCTCCCTTAC 58.624 50.000 0.00 0.00 0.00 2.34
2448 2930 3.245984 TGATCCTTGTCTCCTCCCTTACA 60.246 47.826 0.00 0.00 0.00 2.41
2452 2934 3.369892 CCTTGTCTCCTCCCTTACATGTG 60.370 52.174 9.11 0.00 0.00 3.21
2454 2936 3.099905 TGTCTCCTCCCTTACATGTGAG 58.900 50.000 9.11 9.94 0.00 3.51
2457 2939 3.421394 TCCTCCCTTACATGTGAGGAT 57.579 47.619 32.48 0.00 46.41 3.24
2458 2940 3.309296 TCCTCCCTTACATGTGAGGATC 58.691 50.000 32.48 0.00 46.41 3.36
2459 2941 3.041211 CCTCCCTTACATGTGAGGATCA 58.959 50.000 32.48 17.27 45.93 2.92
2472 2954 4.639078 TGAGGATCATCAAACTGTGGAA 57.361 40.909 7.78 0.00 42.56 3.53
2473 2955 4.984295 TGAGGATCATCAAACTGTGGAAA 58.016 39.130 7.78 0.00 42.56 3.13
2475 2957 5.649395 TGAGGATCATCAAACTGTGGAAATC 59.351 40.000 7.78 0.00 42.56 2.17
2476 2958 4.637534 AGGATCATCAAACTGTGGAAATCG 59.362 41.667 0.00 0.00 0.00 3.34
2478 2960 5.447818 GGATCATCAAACTGTGGAAATCGTC 60.448 44.000 0.00 0.00 0.00 4.20
2492 2974 5.946298 GGAAATCGTCCGGTTTTATTTTCT 58.054 37.500 0.00 0.00 36.40 2.52
2493 2975 6.384224 GGAAATCGTCCGGTTTTATTTTCTT 58.616 36.000 0.00 0.00 36.40 2.52
2494 2976 6.864685 GGAAATCGTCCGGTTTTATTTTCTTT 59.135 34.615 0.00 0.00 36.40 2.52
2495 2977 7.148869 GGAAATCGTCCGGTTTTATTTTCTTTG 60.149 37.037 0.00 0.00 36.40 2.77
2496 2978 4.538917 TCGTCCGGTTTTATTTTCTTTGC 58.461 39.130 0.00 0.00 0.00 3.68
2497 2979 4.276431 TCGTCCGGTTTTATTTTCTTTGCT 59.724 37.500 0.00 0.00 0.00 3.91
2498 2980 4.979815 CGTCCGGTTTTATTTTCTTTGCTT 59.020 37.500 0.00 0.00 0.00 3.91
2499 2981 6.017275 TCGTCCGGTTTTATTTTCTTTGCTTA 60.017 34.615 0.00 0.00 0.00 3.09
2500 2982 6.804783 CGTCCGGTTTTATTTTCTTTGCTTAT 59.195 34.615 0.00 0.00 0.00 1.73
2501 2983 7.007995 CGTCCGGTTTTATTTTCTTTGCTTATC 59.992 37.037 0.00 0.00 0.00 1.75
2502 2984 8.027189 GTCCGGTTTTATTTTCTTTGCTTATCT 58.973 33.333 0.00 0.00 0.00 1.98
2503 2985 8.581578 TCCGGTTTTATTTTCTTTGCTTATCTT 58.418 29.630 0.00 0.00 0.00 2.40
2504 2986 8.647226 CCGGTTTTATTTTCTTTGCTTATCTTG 58.353 33.333 0.00 0.00 0.00 3.02
2505 2987 9.191995 CGGTTTTATTTTCTTTGCTTATCTTGT 57.808 29.630 0.00 0.00 0.00 3.16
2511 2993 5.862924 TTCTTTGCTTATCTTGTTCTCCG 57.137 39.130 0.00 0.00 0.00 4.63
2512 2994 4.253685 TCTTTGCTTATCTTGTTCTCCGG 58.746 43.478 0.00 0.00 0.00 5.14
2513 2995 2.691409 TGCTTATCTTGTTCTCCGGG 57.309 50.000 0.00 0.00 0.00 5.73
2514 2996 1.906574 TGCTTATCTTGTTCTCCGGGT 59.093 47.619 0.00 0.00 0.00 5.28
2515 2997 2.304761 TGCTTATCTTGTTCTCCGGGTT 59.695 45.455 0.00 0.00 0.00 4.11
2516 2998 3.244770 TGCTTATCTTGTTCTCCGGGTTT 60.245 43.478 0.00 0.00 0.00 3.27
2517 2999 3.127030 GCTTATCTTGTTCTCCGGGTTTG 59.873 47.826 0.00 0.00 0.00 2.93
2518 3000 2.200373 ATCTTGTTCTCCGGGTTTGG 57.800 50.000 0.00 0.00 0.00 3.28
2519 3001 0.536460 TCTTGTTCTCCGGGTTTGGC 60.536 55.000 0.00 0.00 0.00 4.52
2520 3002 1.852067 CTTGTTCTCCGGGTTTGGCG 61.852 60.000 0.00 0.00 0.00 5.69
2521 3003 2.281276 GTTCTCCGGGTTTGGCGT 60.281 61.111 0.00 0.00 0.00 5.68
2522 3004 1.895231 GTTCTCCGGGTTTGGCGTT 60.895 57.895 0.00 0.00 0.00 4.84
2523 3005 0.603439 GTTCTCCGGGTTTGGCGTTA 60.603 55.000 0.00 0.00 0.00 3.18
2524 3006 0.320946 TTCTCCGGGTTTGGCGTTAG 60.321 55.000 0.00 0.00 0.00 2.34
2525 3007 1.004200 CTCCGGGTTTGGCGTTAGT 60.004 57.895 0.00 0.00 0.00 2.24
2526 3008 0.247185 CTCCGGGTTTGGCGTTAGTA 59.753 55.000 0.00 0.00 0.00 1.82
2527 3009 0.683973 TCCGGGTTTGGCGTTAGTAA 59.316 50.000 0.00 0.00 0.00 2.24
2532 3014 3.671164 CGGGTTTGGCGTTAGTAAATTGG 60.671 47.826 0.00 0.00 0.00 3.16
2533 3015 3.506844 GGGTTTGGCGTTAGTAAATTGGA 59.493 43.478 0.00 0.00 0.00 3.53
2535 3017 4.163552 GTTTGGCGTTAGTAAATTGGAGC 58.836 43.478 0.00 0.00 0.00 4.70
2546 3028 5.540911 AGTAAATTGGAGCCACACATTTTG 58.459 37.500 3.71 0.00 0.00 2.44
2573 3056 6.154363 CCCCATGTTATTGTGATACCTGTTTT 59.846 38.462 0.00 0.00 0.00 2.43
2574 3057 7.035004 CCCATGTTATTGTGATACCTGTTTTG 58.965 38.462 0.00 0.00 0.00 2.44
2580 3063 5.766150 TTGTGATACCTGTTTTGGTCTTG 57.234 39.130 0.00 0.00 41.22 3.02
2596 3079 4.341806 TGGTCTTGCATCAACTGATTGTTT 59.658 37.500 0.00 0.00 36.63 2.83
2627 3110 6.235231 AGAAATGGATGTACTCGTATTGGT 57.765 37.500 0.00 0.00 0.00 3.67
2666 3149 6.565234 AGAATCGATAACTGTAGTGTTGGAG 58.435 40.000 0.00 0.00 0.00 3.86
2670 3153 2.256117 AACTGTAGTGTTGGAGCCAC 57.744 50.000 0.00 0.00 0.00 5.01
2671 3154 1.424638 ACTGTAGTGTTGGAGCCACT 58.575 50.000 0.00 0.00 44.90 4.00
2672 3155 1.070758 ACTGTAGTGTTGGAGCCACTG 59.929 52.381 3.44 0.00 42.85 3.66
2673 3156 0.250295 TGTAGTGTTGGAGCCACTGC 60.250 55.000 3.44 2.84 42.85 4.40
2702 3185 5.171476 CACCGTACTGATTGATTCTGTTCT 58.829 41.667 0.00 0.00 37.63 3.01
2703 3186 5.639506 CACCGTACTGATTGATTCTGTTCTT 59.360 40.000 0.00 0.00 37.63 2.52
2714 3197 6.486253 TGATTCTGTTCTTGCAATGAGTAC 57.514 37.500 0.00 0.00 0.00 2.73
2728 3211 4.755266 ATGAGTACACTGGGTTGGATAC 57.245 45.455 0.00 0.00 0.00 2.24
2749 3232 7.981789 GGATACAGTGATCACTCAGAATTTACA 59.018 37.037 25.58 2.26 40.20 2.41
2760 3243 8.031864 TCACTCAGAATTTACATCTTCAGTCTC 58.968 37.037 0.00 0.00 0.00 3.36
2761 3244 7.816513 CACTCAGAATTTACATCTTCAGTCTCA 59.183 37.037 0.00 0.00 0.00 3.27
2773 3257 5.624159 TCTTCAGTCTCAATGATTTGGTGT 58.376 37.500 0.00 0.00 33.44 4.16
2774 3259 5.702670 TCTTCAGTCTCAATGATTTGGTGTC 59.297 40.000 0.00 0.00 33.44 3.67
2775 3260 4.971939 TCAGTCTCAATGATTTGGTGTCA 58.028 39.130 0.00 0.00 33.44 3.58
2780 3265 7.654520 CAGTCTCAATGATTTGGTGTCATTTTT 59.345 33.333 0.00 0.00 42.08 1.94
2803 3467 3.431922 CAGCATGGAGGCTTTACATTG 57.568 47.619 0.00 0.00 42.71 2.82
2810 3474 6.533730 CATGGAGGCTTTACATTGTAGGATA 58.466 40.000 0.00 0.00 0.00 2.59
2812 3476 5.903010 TGGAGGCTTTACATTGTAGGATAGA 59.097 40.000 0.00 0.00 0.00 1.98
2849 3514 2.168326 TTCAATCAAGCGAGTGAGCA 57.832 45.000 0.00 0.00 46.10 4.26
2868 3533 5.643348 TGAGCAGTAATATTGGACTGTGTTG 59.357 40.000 16.22 0.00 44.10 3.33
2870 3535 6.003950 AGCAGTAATATTGGACTGTGTTGTT 58.996 36.000 16.22 0.00 44.10 2.83
2873 3538 8.122952 GCAGTAATATTGGACTGTGTTGTTATC 58.877 37.037 16.22 0.00 44.10 1.75
2875 3540 9.959721 AGTAATATTGGACTGTGTTGTTATCTT 57.040 29.630 0.00 0.00 0.00 2.40
2916 3597 6.206498 GTTGACCAAACAGAACTGGAAATAC 58.794 40.000 6.76 0.00 38.75 1.89
2933 3614 6.678878 GGAAATACTCCAAACCTCAAACTTC 58.321 40.000 0.00 0.00 44.67 3.01
2937 3664 3.319122 ACTCCAAACCTCAAACTTCATGC 59.681 43.478 0.00 0.00 0.00 4.06
2952 3679 9.447040 CAAACTTCATGCTCATTCAACATATAG 57.553 33.333 0.00 0.00 0.00 1.31
2996 3724 3.636300 TCCACTGCACTTACAAAAGCATT 59.364 39.130 0.00 0.00 36.05 3.56
3036 3772 5.789643 AATACAGAAGGAAAGCAAAAGCA 57.210 34.783 0.00 0.00 0.00 3.91
3038 3774 2.101415 ACAGAAGGAAAGCAAAAGCACC 59.899 45.455 0.00 0.00 0.00 5.01
3164 3906 6.649973 CCTAGGAGCATTTCATCTGAATACTG 59.350 42.308 1.05 0.00 33.54 2.74
3327 4069 1.620819 GAGAAGCCCTCAGAGTTGTCA 59.379 52.381 0.00 0.00 41.58 3.58
3492 4234 0.669077 GCTCGACGATGTCCATAGGT 59.331 55.000 0.00 0.00 0.00 3.08
3504 4246 1.330655 CCATAGGTGGGCAGACGAGT 61.331 60.000 0.00 0.00 42.11 4.18
3591 4333 2.654749 TGGAGTTGTAGCTGATGTCG 57.345 50.000 0.00 0.00 0.00 4.35
3615 4357 2.752238 CGGAGCGAGGTGAGGAGT 60.752 66.667 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.399858 GGCTCGAATACATAAGCTCGAATA 58.600 41.667 0.00 0.00 39.60 1.75
2 3 3.552273 GGGCTCGAATACATAAGCTCGAA 60.552 47.826 0.00 0.00 39.60 3.71
3 4 2.030185 GGGCTCGAATACATAAGCTCGA 60.030 50.000 0.00 0.00 37.95 4.04
4 5 2.029828 AGGGCTCGAATACATAAGCTCG 60.030 50.000 0.00 0.00 40.23 5.03
5 6 3.580731 GAGGGCTCGAATACATAAGCTC 58.419 50.000 0.00 0.00 35.41 4.09
6 7 3.669251 GAGGGCTCGAATACATAAGCT 57.331 47.619 0.00 0.00 35.12 3.74
31 32 6.040842 ACAAGCTTTATATTACAAGCCATGGG 59.959 38.462 15.13 0.00 45.63 4.00
32 33 7.042797 ACAAGCTTTATATTACAAGCCATGG 57.957 36.000 7.63 7.63 45.63 3.66
60 61 9.950680 CAACACAACTCTAGACACAAATAAAAT 57.049 29.630 0.00 0.00 0.00 1.82
61 62 8.952278 ACAACACAACTCTAGACACAAATAAAA 58.048 29.630 0.00 0.00 0.00 1.52
62 63 8.394877 CACAACACAACTCTAGACACAAATAAA 58.605 33.333 0.00 0.00 0.00 1.40
63 64 7.766738 TCACAACACAACTCTAGACACAAATAA 59.233 33.333 0.00 0.00 0.00 1.40
64 65 7.269316 TCACAACACAACTCTAGACACAAATA 58.731 34.615 0.00 0.00 0.00 1.40
65 66 6.112734 TCACAACACAACTCTAGACACAAAT 58.887 36.000 0.00 0.00 0.00 2.32
66 67 5.483811 TCACAACACAACTCTAGACACAAA 58.516 37.500 0.00 0.00 0.00 2.83
67 68 5.079689 TCACAACACAACTCTAGACACAA 57.920 39.130 0.00 0.00 0.00 3.33
68 69 4.729227 TCACAACACAACTCTAGACACA 57.271 40.909 0.00 0.00 0.00 3.72
69 70 7.316640 AGATATCACAACACAACTCTAGACAC 58.683 38.462 5.32 0.00 0.00 3.67
70 71 7.468141 AGATATCACAACACAACTCTAGACA 57.532 36.000 5.32 0.00 0.00 3.41
71 72 7.489757 GGAAGATATCACAACACAACTCTAGAC 59.510 40.741 5.32 0.00 0.00 2.59
72 73 7.363880 GGGAAGATATCACAACACAACTCTAGA 60.364 40.741 5.32 0.00 0.00 2.43
73 74 6.758886 GGGAAGATATCACAACACAACTCTAG 59.241 42.308 5.32 0.00 0.00 2.43
74 75 6.627287 CGGGAAGATATCACAACACAACTCTA 60.627 42.308 5.32 0.00 0.00 2.43
75 76 5.491982 GGGAAGATATCACAACACAACTCT 58.508 41.667 5.32 0.00 0.00 3.24
76 77 4.330074 CGGGAAGATATCACAACACAACTC 59.670 45.833 5.32 0.00 0.00 3.01
77 78 4.253685 CGGGAAGATATCACAACACAACT 58.746 43.478 5.32 0.00 0.00 3.16
78 79 4.000988 ACGGGAAGATATCACAACACAAC 58.999 43.478 5.32 0.00 0.00 3.32
79 80 4.000325 CACGGGAAGATATCACAACACAA 59.000 43.478 5.32 0.00 0.00 3.33
80 81 3.259625 TCACGGGAAGATATCACAACACA 59.740 43.478 5.32 0.00 0.00 3.72
81 82 3.857052 TCACGGGAAGATATCACAACAC 58.143 45.455 5.32 0.00 0.00 3.32
82 83 3.513912 ACTCACGGGAAGATATCACAACA 59.486 43.478 5.32 0.00 0.00 3.33
83 84 4.113354 GACTCACGGGAAGATATCACAAC 58.887 47.826 5.32 0.00 0.00 3.32
84 85 3.132289 GGACTCACGGGAAGATATCACAA 59.868 47.826 5.32 0.00 0.00 3.33
85 86 2.693591 GGACTCACGGGAAGATATCACA 59.306 50.000 5.32 0.00 0.00 3.58
86 87 2.959707 AGGACTCACGGGAAGATATCAC 59.040 50.000 5.32 0.00 0.00 3.06
87 88 3.314307 AGGACTCACGGGAAGATATCA 57.686 47.619 5.32 0.00 0.00 2.15
88 89 3.637229 TCAAGGACTCACGGGAAGATATC 59.363 47.826 0.00 0.00 0.00 1.63
89 90 3.643237 TCAAGGACTCACGGGAAGATAT 58.357 45.455 0.00 0.00 0.00 1.63
90 91 3.095912 TCAAGGACTCACGGGAAGATA 57.904 47.619 0.00 0.00 0.00 1.98
91 92 1.938585 TCAAGGACTCACGGGAAGAT 58.061 50.000 0.00 0.00 0.00 2.40
92 93 1.825474 GATCAAGGACTCACGGGAAGA 59.175 52.381 0.00 0.00 0.00 2.87
93 94 1.827969 AGATCAAGGACTCACGGGAAG 59.172 52.381 0.00 0.00 0.00 3.46
94 95 1.938585 AGATCAAGGACTCACGGGAA 58.061 50.000 0.00 0.00 0.00 3.97
95 96 1.550524 CAAGATCAAGGACTCACGGGA 59.449 52.381 0.00 0.00 0.00 5.14
96 97 1.550524 TCAAGATCAAGGACTCACGGG 59.449 52.381 0.00 0.00 0.00 5.28
97 98 3.118992 TGATCAAGATCAAGGACTCACGG 60.119 47.826 10.16 0.00 44.14 4.94
98 99 4.115401 TGATCAAGATCAAGGACTCACG 57.885 45.455 10.16 0.00 44.14 4.35
107 108 7.887833 CACGCAAATGTGTATGATCAAGATCAA 60.888 37.037 15.92 0.83 42.70 2.57
108 109 6.457257 CACGCAAATGTGTATGATCAAGATCA 60.457 38.462 14.50 14.50 43.16 2.92
109 110 5.905733 CACGCAAATGTGTATGATCAAGATC 59.094 40.000 0.00 3.12 36.94 2.75
110 111 5.813717 CACGCAAATGTGTATGATCAAGAT 58.186 37.500 0.00 0.00 36.94 2.40
111 112 5.220557 CACGCAAATGTGTATGATCAAGA 57.779 39.130 0.00 0.00 36.94 3.02
122 123 5.868257 ACACTAATCATACACGCAAATGTG 58.132 37.500 0.00 0.00 45.41 3.21
123 124 6.237728 CGTACACTAATCATACACGCAAATGT 60.238 38.462 0.00 0.00 36.56 2.71
124 125 6.020201 TCGTACACTAATCATACACGCAAATG 60.020 38.462 0.00 0.00 0.00 2.32
125 126 6.037726 TCGTACACTAATCATACACGCAAAT 58.962 36.000 0.00 0.00 0.00 2.32
126 127 5.400703 TCGTACACTAATCATACACGCAAA 58.599 37.500 0.00 0.00 0.00 3.68
127 128 4.984205 TCGTACACTAATCATACACGCAA 58.016 39.130 0.00 0.00 0.00 4.85
128 129 4.619437 TCGTACACTAATCATACACGCA 57.381 40.909 0.00 0.00 0.00 5.24
129 130 5.684184 TCAATCGTACACTAATCATACACGC 59.316 40.000 0.00 0.00 0.00 5.34
130 131 7.673810 TTCAATCGTACACTAATCATACACG 57.326 36.000 0.00 0.00 0.00 4.49
148 149 0.931005 GTGACGCCCTCGATTCAATC 59.069 55.000 0.00 0.00 39.41 2.67
149 150 0.249120 TGTGACGCCCTCGATTCAAT 59.751 50.000 0.00 0.00 39.41 2.57
150 151 0.034198 TTGTGACGCCCTCGATTCAA 59.966 50.000 0.00 0.00 39.41 2.69
151 152 0.034198 TTTGTGACGCCCTCGATTCA 59.966 50.000 0.00 0.00 39.41 2.57
152 153 1.136057 GTTTTGTGACGCCCTCGATTC 60.136 52.381 0.00 0.00 39.41 2.52
153 154 0.872388 GTTTTGTGACGCCCTCGATT 59.128 50.000 0.00 0.00 39.41 3.34
154 155 0.250124 TGTTTTGTGACGCCCTCGAT 60.250 50.000 0.00 0.00 39.41 3.59
155 156 1.144276 TGTTTTGTGACGCCCTCGA 59.856 52.632 0.00 0.00 39.41 4.04
156 157 1.157870 AGTGTTTTGTGACGCCCTCG 61.158 55.000 0.00 0.00 42.43 4.63
157 158 1.002792 GAAGTGTTTTGTGACGCCCTC 60.003 52.381 0.00 0.00 0.00 4.30
158 159 1.021968 GAAGTGTTTTGTGACGCCCT 58.978 50.000 0.00 0.00 0.00 5.19
159 160 0.030235 GGAAGTGTTTTGTGACGCCC 59.970 55.000 0.00 0.00 0.00 6.13
160 161 0.030235 GGGAAGTGTTTTGTGACGCC 59.970 55.000 0.00 0.00 0.00 5.68
161 162 0.316689 CGGGAAGTGTTTTGTGACGC 60.317 55.000 0.00 0.00 0.00 5.19
162 163 1.260561 CTCGGGAAGTGTTTTGTGACG 59.739 52.381 0.00 0.00 0.00 4.35
163 164 1.002792 GCTCGGGAAGTGTTTTGTGAC 60.003 52.381 0.00 0.00 0.00 3.67
164 165 1.305201 GCTCGGGAAGTGTTTTGTGA 58.695 50.000 0.00 0.00 0.00 3.58
165 166 1.021202 TGCTCGGGAAGTGTTTTGTG 58.979 50.000 0.00 0.00 0.00 3.33
166 167 1.404035 GTTGCTCGGGAAGTGTTTTGT 59.596 47.619 0.00 0.00 0.00 2.83
167 168 1.269051 GGTTGCTCGGGAAGTGTTTTG 60.269 52.381 0.00 0.00 0.00 2.44
168 169 1.029681 GGTTGCTCGGGAAGTGTTTT 58.970 50.000 0.00 0.00 0.00 2.43
169 170 0.822121 GGGTTGCTCGGGAAGTGTTT 60.822 55.000 0.00 0.00 0.00 2.83
170 171 1.228154 GGGTTGCTCGGGAAGTGTT 60.228 57.895 0.00 0.00 0.00 3.32
171 172 2.147387 AGGGTTGCTCGGGAAGTGT 61.147 57.895 0.00 0.00 0.00 3.55
179 180 0.234884 GTTTTCGACAGGGTTGCTCG 59.765 55.000 0.00 0.00 32.70 5.03
185 186 7.614192 AGGATATTTAAATGTTTTCGACAGGGT 59.386 33.333 11.05 0.00 42.62 4.34
189 190 7.821652 TGCAGGATATTTAAATGTTTTCGACA 58.178 30.769 11.05 0.00 43.71 4.35
192 193 8.459521 TGTTGCAGGATATTTAAATGTTTTCG 57.540 30.769 11.05 0.00 0.00 3.46
209 210 2.485426 AGTGTGATCGAATTGTTGCAGG 59.515 45.455 0.00 0.00 0.00 4.85
210 211 3.818961 AGTGTGATCGAATTGTTGCAG 57.181 42.857 0.00 0.00 0.00 4.41
213 214 3.665409 GTGCAAGTGTGATCGAATTGTTG 59.335 43.478 0.00 0.00 0.00 3.33
218 219 2.226437 GGTTGTGCAAGTGTGATCGAAT 59.774 45.455 0.00 0.00 0.00 3.34
222 223 3.181487 ACTTTGGTTGTGCAAGTGTGATC 60.181 43.478 0.00 0.00 29.36 2.92
273 274 5.661458 TGCGGAACCTTTTTAATGTTTTCA 58.339 33.333 0.00 0.00 0.00 2.69
274 275 5.980715 TCTGCGGAACCTTTTTAATGTTTTC 59.019 36.000 0.00 0.00 0.00 2.29
275 276 5.908341 TCTGCGGAACCTTTTTAATGTTTT 58.092 33.333 0.00 0.00 0.00 2.43
276 277 5.300792 TCTCTGCGGAACCTTTTTAATGTTT 59.699 36.000 0.00 0.00 0.00 2.83
277 278 4.825085 TCTCTGCGGAACCTTTTTAATGTT 59.175 37.500 0.00 0.00 0.00 2.71
278 279 4.394729 TCTCTGCGGAACCTTTTTAATGT 58.605 39.130 0.00 0.00 0.00 2.71
279 280 5.567138 ATCTCTGCGGAACCTTTTTAATG 57.433 39.130 0.00 0.00 0.00 1.90
280 281 6.177610 TGTATCTCTGCGGAACCTTTTTAAT 58.822 36.000 0.00 0.00 0.00 1.40
281 282 5.553123 TGTATCTCTGCGGAACCTTTTTAA 58.447 37.500 0.00 0.00 0.00 1.52
282 283 5.155278 TGTATCTCTGCGGAACCTTTTTA 57.845 39.130 0.00 0.00 0.00 1.52
283 284 4.015872 TGTATCTCTGCGGAACCTTTTT 57.984 40.909 0.00 0.00 0.00 1.94
284 285 3.695830 TGTATCTCTGCGGAACCTTTT 57.304 42.857 0.00 0.00 0.00 2.27
288 289 4.883083 TCATATTGTATCTCTGCGGAACC 58.117 43.478 0.00 0.00 0.00 3.62
325 326 5.739752 TGCATGTGCTATACTCAATTGTC 57.260 39.130 5.13 0.00 42.66 3.18
330 331 5.647225 TCATTGTTGCATGTGCTATACTCAA 59.353 36.000 6.55 0.43 42.66 3.02
335 336 7.994194 TGTATTTCATTGTTGCATGTGCTATA 58.006 30.769 6.55 0.00 42.66 1.31
339 340 4.327898 CCTGTATTTCATTGTTGCATGTGC 59.672 41.667 0.00 0.00 42.50 4.57
362 364 7.743520 TTCCGAAAAACTAATGTTTGTGAAC 57.256 32.000 0.00 0.00 44.70 3.18
376 378 7.700234 TGATTATGCATGTGTATTCCGAAAAAC 59.300 33.333 10.16 0.00 0.00 2.43
394 396 4.977963 AGCGTTATGTTGCAATGATTATGC 59.022 37.500 0.59 9.14 44.08 3.14
421 423 2.940410 TCCACTTCGAAGGTTTCAACAC 59.060 45.455 27.86 0.00 0.00 3.32
448 450 4.041723 GCCGGTGCACAAAAATATGTATC 58.958 43.478 20.43 0.00 37.47 2.24
449 451 3.181480 GGCCGGTGCACAAAAATATGTAT 60.181 43.478 20.43 0.00 40.13 2.29
450 452 2.164624 GGCCGGTGCACAAAAATATGTA 59.835 45.455 20.43 0.00 40.13 2.29
492 902 3.502191 AGTCTAGCTTCGAAGAGCTTG 57.498 47.619 28.95 19.81 40.39 4.01
493 903 4.266714 ACTAGTCTAGCTTCGAAGAGCTT 58.733 43.478 28.95 12.38 40.39 3.74
497 907 4.395542 GGTCAACTAGTCTAGCTTCGAAGA 59.604 45.833 28.95 7.89 0.00 2.87
512 922 2.691011 GCAACAAGTTTGGGGTCAACTA 59.309 45.455 0.00 0.00 31.78 2.24
573 983 2.549754 ACCAAAGCTCGATGTGAAAGTG 59.450 45.455 0.00 0.00 0.00 3.16
578 988 1.066858 GGAGACCAAAGCTCGATGTGA 60.067 52.381 0.00 0.00 33.19 3.58
580 990 0.976641 TGGAGACCAAAGCTCGATGT 59.023 50.000 0.00 0.00 33.19 3.06
605 1015 1.077716 AAGCTCACGCCCATAACCC 60.078 57.895 0.00 0.00 36.60 4.11
608 1018 0.818938 TACGAAGCTCACGCCCATAA 59.181 50.000 12.08 0.00 36.60 1.90
621 1031 2.476854 GCCTTGCATCAAGCTTACGAAG 60.477 50.000 0.00 0.00 45.94 3.79
623 1033 1.086696 GCCTTGCATCAAGCTTACGA 58.913 50.000 0.00 0.00 45.94 3.43
644 1054 2.273776 CCCACCCACACACACACA 59.726 61.111 0.00 0.00 0.00 3.72
645 1055 2.118404 CACCCACCCACACACACAC 61.118 63.158 0.00 0.00 0.00 3.82
646 1056 2.273776 CACCCACCCACACACACA 59.726 61.111 0.00 0.00 0.00 3.72
648 1058 3.814906 CCCACCCACCCACACACA 61.815 66.667 0.00 0.00 0.00 3.72
649 1059 3.816090 ACCCACCCACCCACACAC 61.816 66.667 0.00 0.00 0.00 3.82
650 1060 3.814906 CACCCACCCACCCACACA 61.815 66.667 0.00 0.00 0.00 3.72
679 1089 0.036577 CATCATCTCTCGCATCCCCC 60.037 60.000 0.00 0.00 0.00 5.40
680 1090 0.972134 TCATCATCTCTCGCATCCCC 59.028 55.000 0.00 0.00 0.00 4.81
681 1091 1.067000 CCTCATCATCTCTCGCATCCC 60.067 57.143 0.00 0.00 0.00 3.85
682 1092 1.617850 ACCTCATCATCTCTCGCATCC 59.382 52.381 0.00 0.00 0.00 3.51
683 1093 3.316283 GAACCTCATCATCTCTCGCATC 58.684 50.000 0.00 0.00 0.00 3.91
684 1094 2.288091 CGAACCTCATCATCTCTCGCAT 60.288 50.000 0.00 0.00 0.00 4.73
694 1104 0.678950 TGTGTGCTCGAACCTCATCA 59.321 50.000 0.00 0.00 0.00 3.07
711 1121 4.020543 GACTCTCTACCTCACTTCCATGT 58.979 47.826 0.00 0.00 0.00 3.21
723 1133 5.240623 CCATGATGTAGACTGACTCTCTACC 59.759 48.000 0.00 0.00 39.57 3.18
729 1139 3.034635 ACCCCATGATGTAGACTGACTC 58.965 50.000 0.00 0.00 0.00 3.36
773 1183 5.957771 TGTGTCCTTTATCCTATCTGCTT 57.042 39.130 0.00 0.00 0.00 3.91
778 1188 7.901029 TCTCATCATGTGTCCTTTATCCTATC 58.099 38.462 0.00 0.00 0.00 2.08
792 1202 2.418976 CTGGTGTGCTTCTCATCATGTG 59.581 50.000 0.00 0.00 0.00 3.21
802 1212 0.861837 CAACTCGTCTGGTGTGCTTC 59.138 55.000 0.00 0.00 0.00 3.86
805 1215 1.295792 TTTCAACTCGTCTGGTGTGC 58.704 50.000 0.00 0.00 0.00 4.57
888 1298 6.255020 GTGTTGTTCTCATTCGGTCGTATAAT 59.745 38.462 0.00 0.00 0.00 1.28
925 1336 5.590259 CACCCAATAGGAACAGTTGATTAGG 59.410 44.000 0.00 0.00 39.89 2.69
937 1348 4.750833 TTCCCTTTTCACCCAATAGGAA 57.249 40.909 0.00 0.00 35.68 3.36
1582 2020 4.439305 TGTGGAGAAAATGTAATGCAGC 57.561 40.909 0.00 0.00 0.00 5.25
1592 2030 4.946157 CCAGCAGACTTATGTGGAGAAAAT 59.054 41.667 0.00 0.00 0.00 1.82
1597 2035 1.209019 AGCCAGCAGACTTATGTGGAG 59.791 52.381 0.00 0.00 0.00 3.86
1631 2069 1.547372 AGTGCAAATGAGTGAATGGCC 59.453 47.619 0.00 0.00 0.00 5.36
1640 2078 2.947652 CCCCTATCACAGTGCAAATGAG 59.052 50.000 7.15 0.00 34.17 2.90
1697 2168 2.935740 GCTCCAAACTGGGCCAAGC 61.936 63.158 7.20 9.00 38.32 4.01
1715 2189 6.974932 ATATGTTCAAGTCACAGTAAGCAG 57.025 37.500 0.00 0.00 0.00 4.24
1802 2279 7.964604 AAGAAATTGTACTACCAAGTCAGAC 57.035 36.000 0.00 0.00 37.15 3.51
1847 2324 6.874134 GGACATACCAGTATCATATTGTGACC 59.126 42.308 0.00 0.00 37.95 4.02
1849 2327 7.610580 TGGACATACCAGTATCATATTGTGA 57.389 36.000 0.00 0.00 44.64 3.58
1874 2352 8.076178 GGGAATCCAAATTTATACATTGTCGAG 58.924 37.037 0.09 0.00 0.00 4.04
1875 2353 7.013846 GGGGAATCCAAATTTATACATTGTCGA 59.986 37.037 0.09 0.00 35.00 4.20
1877 2355 8.017418 TGGGGAATCCAAATTTATACATTGTC 57.983 34.615 0.09 0.00 43.84 3.18
1896 2374 3.314693 ACAGAGAGTTGTACTTGGGGAA 58.685 45.455 0.00 0.00 0.00 3.97
1897 2375 2.897969 GACAGAGAGTTGTACTTGGGGA 59.102 50.000 0.00 0.00 0.00 4.81
1906 2384 2.119495 ACCAACCTGACAGAGAGTTGT 58.881 47.619 16.81 7.07 38.31 3.32
1907 2385 2.487934 CACCAACCTGACAGAGAGTTG 58.512 52.381 3.32 9.73 39.41 3.16
1910 2388 0.683973 AGCACCAACCTGACAGAGAG 59.316 55.000 3.32 0.00 0.00 3.20
1918 2396 5.106987 GCAATGAAAATTAAGCACCAACCTG 60.107 40.000 0.00 0.00 0.00 4.00
1920 2398 4.996758 AGCAATGAAAATTAAGCACCAACC 59.003 37.500 0.00 0.00 0.00 3.77
1922 2400 7.441017 AGTAAGCAATGAAAATTAAGCACCAA 58.559 30.769 0.00 0.00 0.00 3.67
1937 2415 5.706916 ACAATGAAGCAGAAGTAAGCAATG 58.293 37.500 0.00 0.00 0.00 2.82
1938 2416 5.391310 CGACAATGAAGCAGAAGTAAGCAAT 60.391 40.000 0.00 0.00 0.00 3.56
1942 2420 3.681897 AGCGACAATGAAGCAGAAGTAAG 59.318 43.478 7.31 0.00 0.00 2.34
1943 2421 3.664107 AGCGACAATGAAGCAGAAGTAA 58.336 40.909 7.31 0.00 0.00 2.24
1945 2423 2.175878 AGCGACAATGAAGCAGAAGT 57.824 45.000 7.31 0.00 0.00 3.01
1946 2424 2.740981 AGAAGCGACAATGAAGCAGAAG 59.259 45.455 7.31 0.00 0.00 2.85
1947 2425 2.771089 AGAAGCGACAATGAAGCAGAA 58.229 42.857 7.31 0.00 0.00 3.02
1948 2426 2.462456 AGAAGCGACAATGAAGCAGA 57.538 45.000 7.31 0.00 0.00 4.26
1949 2427 2.349886 GGTAGAAGCGACAATGAAGCAG 59.650 50.000 7.31 0.00 0.00 4.24
1950 2428 2.028112 AGGTAGAAGCGACAATGAAGCA 60.028 45.455 7.31 0.00 0.00 3.91
1951 2429 2.622436 AGGTAGAAGCGACAATGAAGC 58.378 47.619 0.00 0.00 0.00 3.86
1952 2430 3.372206 CCAAGGTAGAAGCGACAATGAAG 59.628 47.826 0.00 0.00 0.00 3.02
1953 2431 3.334691 CCAAGGTAGAAGCGACAATGAA 58.665 45.455 0.00 0.00 0.00 2.57
1955 2433 2.009774 CCCAAGGTAGAAGCGACAATG 58.990 52.381 0.00 0.00 0.00 2.82
1956 2434 1.628846 ACCCAAGGTAGAAGCGACAAT 59.371 47.619 0.00 0.00 32.11 2.71
1957 2435 1.001633 GACCCAAGGTAGAAGCGACAA 59.998 52.381 0.00 0.00 35.25 3.18
1958 2436 0.606604 GACCCAAGGTAGAAGCGACA 59.393 55.000 0.00 0.00 35.25 4.35
1959 2437 0.108281 GGACCCAAGGTAGAAGCGAC 60.108 60.000 0.00 0.00 35.25 5.19
1960 2438 0.252103 AGGACCCAAGGTAGAAGCGA 60.252 55.000 0.00 0.00 35.25 4.93
1961 2439 0.175989 GAGGACCCAAGGTAGAAGCG 59.824 60.000 0.00 0.00 35.25 4.68
1962 2440 1.066071 GTGAGGACCCAAGGTAGAAGC 60.066 57.143 0.00 0.00 35.25 3.86
1963 2441 1.555533 GGTGAGGACCCAAGGTAGAAG 59.444 57.143 0.00 0.00 35.25 2.85
1964 2442 1.652947 GGTGAGGACCCAAGGTAGAA 58.347 55.000 0.00 0.00 35.25 2.10
1965 2443 3.393854 GGTGAGGACCCAAGGTAGA 57.606 57.895 0.00 0.00 35.25 2.59
1974 2452 1.201429 ATCCTGTGTGGGTGAGGACC 61.201 60.000 0.00 0.00 38.73 4.46
1976 2454 4.998839 ATCCTGTGTGGGTGAGGA 57.001 55.556 0.00 0.00 40.22 3.71
1987 2465 1.212935 GCTAACCCATCCACATCCTGT 59.787 52.381 0.00 0.00 0.00 4.00
1988 2466 1.477558 GGCTAACCCATCCACATCCTG 60.478 57.143 0.00 0.00 0.00 3.86
1989 2467 0.846693 GGCTAACCCATCCACATCCT 59.153 55.000 0.00 0.00 0.00 3.24
1990 2468 3.421567 GGCTAACCCATCCACATCC 57.578 57.895 0.00 0.00 0.00 3.51
2011 2489 2.514458 ACAAATCATCAGTCACCCCC 57.486 50.000 0.00 0.00 0.00 5.40
2012 2490 4.331968 TGTTACAAATCATCAGTCACCCC 58.668 43.478 0.00 0.00 0.00 4.95
2013 2491 6.238484 GCTATGTTACAAATCATCAGTCACCC 60.238 42.308 0.00 0.00 0.00 4.61
2014 2492 6.316140 TGCTATGTTACAAATCATCAGTCACC 59.684 38.462 0.00 0.00 0.00 4.02
2015 2493 7.307493 TGCTATGTTACAAATCATCAGTCAC 57.693 36.000 0.00 0.00 0.00 3.67
2016 2494 7.553760 ACATGCTATGTTACAAATCATCAGTCA 59.446 33.333 0.00 0.00 41.63 3.41
2017 2495 7.923888 ACATGCTATGTTACAAATCATCAGTC 58.076 34.615 0.00 0.00 41.63 3.51
2018 2496 7.870509 ACATGCTATGTTACAAATCATCAGT 57.129 32.000 0.00 0.00 41.63 3.41
2027 2505 9.456147 ACAAGGTAATTACATGCTATGTTACAA 57.544 29.630 17.16 0.00 41.63 2.41
2036 2514 8.250332 CCAACATTTACAAGGTAATTACATGCT 58.750 33.333 17.16 2.75 0.00 3.79
2037 2515 7.010091 GCCAACATTTACAAGGTAATTACATGC 59.990 37.037 17.16 2.05 0.00 4.06
2038 2516 8.250332 AGCCAACATTTACAAGGTAATTACATG 58.750 33.333 17.16 16.11 0.00 3.21
2039 2517 8.361169 AGCCAACATTTACAAGGTAATTACAT 57.639 30.769 17.16 7.49 0.00 2.29
2040 2518 7.768807 AGCCAACATTTACAAGGTAATTACA 57.231 32.000 17.16 0.00 0.00 2.41
2054 2532 9.981114 GCCTTGTATATTTAATAGCCAACATTT 57.019 29.630 0.00 0.00 0.00 2.32
2055 2533 9.142014 TGCCTTGTATATTTAATAGCCAACATT 57.858 29.630 0.00 0.00 0.00 2.71
2056 2534 8.704849 TGCCTTGTATATTTAATAGCCAACAT 57.295 30.769 0.00 0.00 0.00 2.71
2057 2535 7.777910 ACTGCCTTGTATATTTAATAGCCAACA 59.222 33.333 0.00 0.00 0.00 3.33
2058 2536 8.076178 CACTGCCTTGTATATTTAATAGCCAAC 58.924 37.037 0.00 0.00 0.00 3.77
2059 2537 7.230510 CCACTGCCTTGTATATTTAATAGCCAA 59.769 37.037 0.00 0.00 0.00 4.52
2060 2538 6.714810 CCACTGCCTTGTATATTTAATAGCCA 59.285 38.462 0.00 0.00 0.00 4.75
2061 2539 6.151144 CCCACTGCCTTGTATATTTAATAGCC 59.849 42.308 0.00 0.00 0.00 3.93
2062 2540 6.940298 TCCCACTGCCTTGTATATTTAATAGC 59.060 38.462 0.00 0.00 0.00 2.97
2063 2541 8.375506 TCTCCCACTGCCTTGTATATTTAATAG 58.624 37.037 0.00 0.00 0.00 1.73
2064 2542 8.154856 GTCTCCCACTGCCTTGTATATTTAATA 58.845 37.037 0.00 0.00 0.00 0.98
2065 2543 6.998673 GTCTCCCACTGCCTTGTATATTTAAT 59.001 38.462 0.00 0.00 0.00 1.40
2066 2544 6.157994 AGTCTCCCACTGCCTTGTATATTTAA 59.842 38.462 0.00 0.00 32.26 1.52
2067 2545 5.665812 AGTCTCCCACTGCCTTGTATATTTA 59.334 40.000 0.00 0.00 32.26 1.40
2068 2546 4.475016 AGTCTCCCACTGCCTTGTATATTT 59.525 41.667 0.00 0.00 32.26 1.40
2069 2547 4.040755 AGTCTCCCACTGCCTTGTATATT 58.959 43.478 0.00 0.00 32.26 1.28
2070 2548 3.643792 GAGTCTCCCACTGCCTTGTATAT 59.356 47.826 0.00 0.00 34.41 0.86
2071 2549 3.031736 GAGTCTCCCACTGCCTTGTATA 58.968 50.000 0.00 0.00 34.41 1.47
2072 2550 1.834263 GAGTCTCCCACTGCCTTGTAT 59.166 52.381 0.00 0.00 34.41 2.29
2073 2551 1.203187 AGAGTCTCCCACTGCCTTGTA 60.203 52.381 0.00 0.00 34.41 2.41
2074 2552 0.472734 AGAGTCTCCCACTGCCTTGT 60.473 55.000 0.00 0.00 34.41 3.16
2075 2553 0.248843 GAGAGTCTCCCACTGCCTTG 59.751 60.000 9.15 0.00 34.41 3.61
2076 2554 0.907230 GGAGAGTCTCCCACTGCCTT 60.907 60.000 26.55 0.00 44.36 4.35
2077 2555 1.305718 GGAGAGTCTCCCACTGCCT 60.306 63.158 26.55 0.00 44.36 4.75
2078 2556 3.304251 GGAGAGTCTCCCACTGCC 58.696 66.667 26.55 1.81 44.36 4.85
2086 2564 2.422127 GCACTGACAGTAGGAGAGTCTC 59.578 54.545 12.01 12.01 33.56 3.36
2087 2565 2.224892 TGCACTGACAGTAGGAGAGTCT 60.225 50.000 8.02 0.00 33.56 3.24
2088 2566 2.163509 TGCACTGACAGTAGGAGAGTC 58.836 52.381 8.02 0.00 0.00 3.36
2089 2567 2.294449 TGCACTGACAGTAGGAGAGT 57.706 50.000 8.02 0.00 0.00 3.24
2090 2568 2.495270 ACATGCACTGACAGTAGGAGAG 59.505 50.000 8.02 4.51 0.00 3.20
2091 2569 2.529632 ACATGCACTGACAGTAGGAGA 58.470 47.619 8.02 0.00 0.00 3.71
2092 2570 3.257393 GAACATGCACTGACAGTAGGAG 58.743 50.000 8.02 1.98 0.00 3.69
2093 2571 2.632512 TGAACATGCACTGACAGTAGGA 59.367 45.455 8.02 4.83 0.00 2.94
2094 2572 3.044235 TGAACATGCACTGACAGTAGG 57.956 47.619 8.02 0.00 0.00 3.18
2095 2573 5.422666 TTTTGAACATGCACTGACAGTAG 57.577 39.130 8.02 4.34 0.00 2.57
2096 2574 5.826601 TTTTTGAACATGCACTGACAGTA 57.173 34.783 8.02 0.00 0.00 2.74
2097 2575 4.717233 TTTTTGAACATGCACTGACAGT 57.283 36.364 1.07 1.07 0.00 3.55
2115 2593 6.811665 GCAGGTTAGAAACACAGAAACTTTTT 59.188 34.615 0.00 0.00 0.00 1.94
2116 2594 6.071616 TGCAGGTTAGAAACACAGAAACTTTT 60.072 34.615 0.00 0.00 0.00 2.27
2117 2595 5.417580 TGCAGGTTAGAAACACAGAAACTTT 59.582 36.000 0.00 0.00 0.00 2.66
2118 2596 4.947388 TGCAGGTTAGAAACACAGAAACTT 59.053 37.500 0.00 0.00 0.00 2.66
2119 2597 4.523083 TGCAGGTTAGAAACACAGAAACT 58.477 39.130 0.00 0.00 0.00 2.66
2120 2598 4.893424 TGCAGGTTAGAAACACAGAAAC 57.107 40.909 0.00 0.00 0.00 2.78
2121 2599 5.359576 ACAATGCAGGTTAGAAACACAGAAA 59.640 36.000 0.00 0.00 0.00 2.52
2122 2600 4.887071 ACAATGCAGGTTAGAAACACAGAA 59.113 37.500 0.00 0.00 0.00 3.02
2123 2601 4.460263 ACAATGCAGGTTAGAAACACAGA 58.540 39.130 0.00 0.00 0.00 3.41
2124 2602 4.836125 ACAATGCAGGTTAGAAACACAG 57.164 40.909 0.00 0.00 0.00 3.66
2125 2603 5.008217 GTGTACAATGCAGGTTAGAAACACA 59.992 40.000 14.52 4.12 34.96 3.72
2126 2604 5.238650 AGTGTACAATGCAGGTTAGAAACAC 59.761 40.000 0.00 12.73 35.04 3.32
2127 2605 5.373222 AGTGTACAATGCAGGTTAGAAACA 58.627 37.500 0.00 0.00 0.00 2.83
2128 2606 5.941948 AGTGTACAATGCAGGTTAGAAAC 57.058 39.130 0.00 0.00 0.00 2.78
2129 2607 6.296026 AGAAGTGTACAATGCAGGTTAGAAA 58.704 36.000 3.73 0.00 0.00 2.52
2135 2613 3.820557 ACAAGAAGTGTACAATGCAGGT 58.179 40.909 3.73 0.00 39.29 4.00
2139 2617 5.095490 GGCATAACAAGAAGTGTACAATGC 58.905 41.667 12.71 12.71 43.51 3.56
2144 2622 4.392138 GTCAGGGCATAACAAGAAGTGTAC 59.608 45.833 0.00 0.00 40.60 2.90
2145 2623 4.286032 AGTCAGGGCATAACAAGAAGTGTA 59.714 41.667 0.00 0.00 40.60 2.90
2147 2625 3.438087 CAGTCAGGGCATAACAAGAAGTG 59.562 47.826 0.00 0.00 0.00 3.16
2148 2626 3.560025 CCAGTCAGGGCATAACAAGAAGT 60.560 47.826 0.00 0.00 0.00 3.01
2159 2637 3.116096 ACTAATACTCCAGTCAGGGCA 57.884 47.619 0.00 0.00 38.24 5.36
2161 2639 5.677319 TGAAACTAATACTCCAGTCAGGG 57.323 43.478 0.00 0.00 38.24 4.45
2185 2667 7.673504 TCCAGATCAAAACAGGGATTAATGAAA 59.326 33.333 0.00 0.00 0.00 2.69
2197 2679 8.030692 TGCAAAAAGATATCCAGATCAAAACAG 58.969 33.333 0.00 0.00 0.00 3.16
2211 2693 9.206870 CAATGTTACCTGTTTGCAAAAAGATAT 57.793 29.630 27.67 15.90 0.00 1.63
2214 2696 5.814705 CCAATGTTACCTGTTTGCAAAAAGA 59.185 36.000 27.67 11.29 0.00 2.52
2225 2707 4.398319 CTTTCACCTCCAATGTTACCTGT 58.602 43.478 0.00 0.00 0.00 4.00
2268 2750 1.163554 GCTTCCAGTTTCTCAGCCAG 58.836 55.000 0.00 0.00 0.00 4.85
2297 2779 1.754803 TCTATCCACAGCTTGTACCGG 59.245 52.381 0.00 0.00 0.00 5.28
2301 2783 3.808466 CTGCTCTATCCACAGCTTGTA 57.192 47.619 0.00 0.00 36.53 2.41
2419 2901 7.028131 AGGGAGGAGACAAGGATCAATATTAT 58.972 38.462 0.00 0.00 0.00 1.28
2425 2907 2.649742 AGGGAGGAGACAAGGATCAA 57.350 50.000 0.00 0.00 0.00 2.57
2426 2908 2.649742 AAGGGAGGAGACAAGGATCA 57.350 50.000 0.00 0.00 0.00 2.92
2427 2909 3.375699 TGTAAGGGAGGAGACAAGGATC 58.624 50.000 0.00 0.00 0.00 3.36
2432 2914 3.515502 CTCACATGTAAGGGAGGAGACAA 59.484 47.826 0.00 0.00 0.00 3.18
2433 2915 3.099905 CTCACATGTAAGGGAGGAGACA 58.900 50.000 0.00 0.00 0.00 3.41
2439 2921 4.346127 TGATGATCCTCACATGTAAGGGAG 59.654 45.833 15.45 9.36 33.21 4.30
2440 2922 4.297768 TGATGATCCTCACATGTAAGGGA 58.702 43.478 15.45 14.33 33.21 4.20
2441 2923 4.694760 TGATGATCCTCACATGTAAGGG 57.305 45.455 15.45 9.55 33.21 3.95
2442 2924 6.037940 CAGTTTGATGATCCTCACATGTAAGG 59.962 42.308 9.00 9.00 0.00 2.69
2446 2928 4.698780 CACAGTTTGATGATCCTCACATGT 59.301 41.667 0.00 0.00 0.00 3.21
2447 2929 4.095932 CCACAGTTTGATGATCCTCACATG 59.904 45.833 0.00 3.12 0.00 3.21
2448 2930 4.019051 TCCACAGTTTGATGATCCTCACAT 60.019 41.667 0.00 0.00 0.00 3.21
2452 2934 5.220739 CGATTTCCACAGTTTGATGATCCTC 60.221 44.000 0.00 0.00 0.00 3.71
2454 2936 4.396166 ACGATTTCCACAGTTTGATGATCC 59.604 41.667 0.00 0.00 0.00 3.36
2456 2938 4.396166 GGACGATTTCCACAGTTTGATGAT 59.604 41.667 0.00 0.00 45.10 2.45
2457 2939 3.751175 GGACGATTTCCACAGTTTGATGA 59.249 43.478 0.00 0.00 45.10 2.92
2458 2940 3.424829 CGGACGATTTCCACAGTTTGATG 60.425 47.826 0.00 0.00 46.29 3.07
2459 2941 2.742053 CGGACGATTTCCACAGTTTGAT 59.258 45.455 0.00 0.00 46.29 2.57
2460 2942 2.139917 CGGACGATTTCCACAGTTTGA 58.860 47.619 0.00 0.00 46.29 2.69
2461 2943 1.196808 CCGGACGATTTCCACAGTTTG 59.803 52.381 0.00 0.00 46.29 2.93
2462 2944 1.202722 ACCGGACGATTTCCACAGTTT 60.203 47.619 9.46 0.00 46.29 2.66
2464 2946 0.395312 AACCGGACGATTTCCACAGT 59.605 50.000 9.46 0.00 46.29 3.55
2465 2947 1.519408 AAACCGGACGATTTCCACAG 58.481 50.000 9.46 0.00 46.29 3.66
2466 2948 1.970092 AAAACCGGACGATTTCCACA 58.030 45.000 9.46 0.00 46.29 4.17
2469 2951 5.946298 AGAAAATAAAACCGGACGATTTCC 58.054 37.500 9.46 0.00 41.75 3.13
2471 2953 6.144886 GCAAAGAAAATAAAACCGGACGATTT 59.855 34.615 9.46 5.50 0.00 2.17
2472 2954 5.631929 GCAAAGAAAATAAAACCGGACGATT 59.368 36.000 9.46 0.00 0.00 3.34
2473 2955 5.048294 AGCAAAGAAAATAAAACCGGACGAT 60.048 36.000 9.46 0.00 0.00 3.73
2475 2957 4.542735 AGCAAAGAAAATAAAACCGGACG 58.457 39.130 9.46 0.00 0.00 4.79
2476 2958 8.027189 AGATAAGCAAAGAAAATAAAACCGGAC 58.973 33.333 9.46 0.00 0.00 4.79
2478 2960 8.647226 CAAGATAAGCAAAGAAAATAAAACCGG 58.353 33.333 0.00 0.00 0.00 5.28
2485 2967 8.450964 CGGAGAACAAGATAAGCAAAGAAAATA 58.549 33.333 0.00 0.00 0.00 1.40
2486 2968 7.308435 CGGAGAACAAGATAAGCAAAGAAAAT 58.692 34.615 0.00 0.00 0.00 1.82
2487 2969 6.293955 CCGGAGAACAAGATAAGCAAAGAAAA 60.294 38.462 0.00 0.00 0.00 2.29
2488 2970 5.181245 CCGGAGAACAAGATAAGCAAAGAAA 59.819 40.000 0.00 0.00 0.00 2.52
2489 2971 4.695455 CCGGAGAACAAGATAAGCAAAGAA 59.305 41.667 0.00 0.00 0.00 2.52
2490 2972 4.253685 CCGGAGAACAAGATAAGCAAAGA 58.746 43.478 0.00 0.00 0.00 2.52
2491 2973 3.375299 CCCGGAGAACAAGATAAGCAAAG 59.625 47.826 0.73 0.00 0.00 2.77
2492 2974 3.244770 ACCCGGAGAACAAGATAAGCAAA 60.245 43.478 0.73 0.00 0.00 3.68
2493 2975 2.304761 ACCCGGAGAACAAGATAAGCAA 59.695 45.455 0.73 0.00 0.00 3.91
2494 2976 1.906574 ACCCGGAGAACAAGATAAGCA 59.093 47.619 0.73 0.00 0.00 3.91
2495 2977 2.693267 ACCCGGAGAACAAGATAAGC 57.307 50.000 0.73 0.00 0.00 3.09
2496 2978 3.689649 CCAAACCCGGAGAACAAGATAAG 59.310 47.826 0.73 0.00 0.00 1.73
2497 2979 3.681593 CCAAACCCGGAGAACAAGATAA 58.318 45.455 0.73 0.00 0.00 1.75
2498 2980 2.617021 GCCAAACCCGGAGAACAAGATA 60.617 50.000 0.73 0.00 0.00 1.98
2499 2981 1.886655 GCCAAACCCGGAGAACAAGAT 60.887 52.381 0.73 0.00 0.00 2.40
2500 2982 0.536460 GCCAAACCCGGAGAACAAGA 60.536 55.000 0.73 0.00 0.00 3.02
2501 2983 1.852067 CGCCAAACCCGGAGAACAAG 61.852 60.000 0.73 0.00 0.00 3.16
2502 2984 1.894756 CGCCAAACCCGGAGAACAA 60.895 57.895 0.73 0.00 0.00 2.83
2503 2985 2.281208 CGCCAAACCCGGAGAACA 60.281 61.111 0.73 0.00 0.00 3.18
2504 2986 0.603439 TAACGCCAAACCCGGAGAAC 60.603 55.000 0.73 0.00 0.00 3.01
2505 2987 0.320946 CTAACGCCAAACCCGGAGAA 60.321 55.000 0.73 0.00 0.00 2.87
2506 2988 1.294138 CTAACGCCAAACCCGGAGA 59.706 57.895 0.73 0.00 0.00 3.71
2507 2989 0.247185 TACTAACGCCAAACCCGGAG 59.753 55.000 0.73 0.00 0.00 4.63
2508 2990 0.683973 TTACTAACGCCAAACCCGGA 59.316 50.000 0.73 0.00 0.00 5.14
2509 2991 1.521580 TTTACTAACGCCAAACCCGG 58.478 50.000 0.00 0.00 0.00 5.73
2510 2992 3.494232 CAATTTACTAACGCCAAACCCG 58.506 45.455 0.00 0.00 0.00 5.28
2511 2993 3.506844 TCCAATTTACTAACGCCAAACCC 59.493 43.478 0.00 0.00 0.00 4.11
2512 2994 4.729595 CTCCAATTTACTAACGCCAAACC 58.270 43.478 0.00 0.00 0.00 3.27
2513 2995 4.163552 GCTCCAATTTACTAACGCCAAAC 58.836 43.478 0.00 0.00 0.00 2.93
2514 2996 3.191791 GGCTCCAATTTACTAACGCCAAA 59.808 43.478 0.00 0.00 36.37 3.28
2515 2997 2.750712 GGCTCCAATTTACTAACGCCAA 59.249 45.455 0.00 0.00 36.37 4.52
2516 2998 2.290387 TGGCTCCAATTTACTAACGCCA 60.290 45.455 0.00 0.00 43.34 5.69
2517 2999 2.096980 GTGGCTCCAATTTACTAACGCC 59.903 50.000 0.00 0.00 36.85 5.68
2518 3000 2.745281 TGTGGCTCCAATTTACTAACGC 59.255 45.455 0.00 0.00 0.00 4.84
2519 3001 3.749088 TGTGTGGCTCCAATTTACTAACG 59.251 43.478 0.00 0.00 0.00 3.18
2520 3002 5.897377 ATGTGTGGCTCCAATTTACTAAC 57.103 39.130 0.00 0.00 0.00 2.34
2521 3003 6.909550 AAATGTGTGGCTCCAATTTACTAA 57.090 33.333 0.00 0.00 0.00 2.24
2522 3004 6.295011 CCAAAATGTGTGGCTCCAATTTACTA 60.295 38.462 0.00 0.00 0.00 1.82
2523 3005 5.511202 CCAAAATGTGTGGCTCCAATTTACT 60.511 40.000 0.00 0.00 0.00 2.24
2524 3006 4.690280 CCAAAATGTGTGGCTCCAATTTAC 59.310 41.667 0.00 0.00 0.00 2.01
2525 3007 4.892433 CCAAAATGTGTGGCTCCAATTTA 58.108 39.130 0.00 0.00 0.00 1.40
2526 3008 3.742385 CCAAAATGTGTGGCTCCAATTT 58.258 40.909 0.00 0.00 0.00 1.82
2527 3009 3.405823 CCAAAATGTGTGGCTCCAATT 57.594 42.857 0.00 0.00 0.00 2.32
2535 3017 0.036199 CATGGGGCCAAAATGTGTGG 60.036 55.000 4.39 0.00 39.33 4.17
2546 3028 2.890945 GGTATCACAATAACATGGGGCC 59.109 50.000 0.00 0.00 0.00 5.80
2548 3030 4.792068 ACAGGTATCACAATAACATGGGG 58.208 43.478 0.00 0.00 0.00 4.96
2573 3056 3.489355 ACAATCAGTTGATGCAAGACCA 58.511 40.909 0.00 0.00 38.71 4.02
2574 3057 4.510038 AACAATCAGTTGATGCAAGACC 57.490 40.909 0.00 0.00 39.49 3.85
2580 3063 7.862372 TCTTAAACAGAAACAATCAGTTGATGC 59.138 33.333 0.00 0.00 41.19 3.91
2596 3079 7.383687 ACGAGTACATCCATTTCTTAAACAGA 58.616 34.615 0.00 0.00 0.00 3.41
2638 3121 8.188799 CCAACACTACAGTTATCGATTCTCTAA 58.811 37.037 1.71 0.00 0.00 2.10
2642 3125 6.525578 TCCAACACTACAGTTATCGATTCT 57.474 37.500 1.71 0.00 0.00 2.40
2653 3136 1.800805 CAGTGGCTCCAACACTACAG 58.199 55.000 0.00 0.00 46.76 2.74
2655 3138 2.544726 GCAGTGGCTCCAACACTAC 58.455 57.895 0.00 0.00 46.76 2.73
2666 3149 4.347453 CGGTGGCAAAGCAGTGGC 62.347 66.667 6.29 6.29 44.09 5.01
2670 3153 0.602638 TCAGTACGGTGGCAAAGCAG 60.603 55.000 0.00 0.00 0.00 4.24
2671 3154 0.036164 ATCAGTACGGTGGCAAAGCA 59.964 50.000 0.00 0.00 0.00 3.91
2672 3155 1.135689 CAATCAGTACGGTGGCAAAGC 60.136 52.381 0.00 0.00 0.00 3.51
2673 3156 2.422597 TCAATCAGTACGGTGGCAAAG 58.577 47.619 0.00 0.00 0.00 2.77
2674 3157 2.552599 TCAATCAGTACGGTGGCAAA 57.447 45.000 0.00 0.00 0.00 3.68
2678 3161 3.861840 ACAGAATCAATCAGTACGGTGG 58.138 45.455 0.00 0.00 0.00 4.61
2702 3185 2.884012 CAACCCAGTGTACTCATTGCAA 59.116 45.455 0.00 0.00 31.31 4.08
2703 3186 2.503331 CAACCCAGTGTACTCATTGCA 58.497 47.619 0.00 0.00 31.31 4.08
2728 3211 8.489990 AAGATGTAAATTCTGAGTGATCACTG 57.510 34.615 32.50 18.88 42.66 3.66
2737 3220 8.768957 TTGAGACTGAAGATGTAAATTCTGAG 57.231 34.615 0.00 0.00 0.00 3.35
2749 3232 6.243900 ACACCAAATCATTGAGACTGAAGAT 58.756 36.000 0.00 0.00 38.94 2.40
2760 3243 5.238868 TGGCAAAAATGACACCAAATCATTG 59.761 36.000 1.21 0.00 44.24 2.82
2761 3244 5.374921 TGGCAAAAATGACACCAAATCATT 58.625 33.333 0.00 0.00 46.40 2.57
2767 3251 1.483827 TGCTGGCAAAAATGACACCAA 59.516 42.857 0.00 0.00 0.00 3.67
2773 3257 1.551430 CCTCCATGCTGGCAAAAATGA 59.449 47.619 0.00 0.00 37.47 2.57
2774 3259 2.018542 CCTCCATGCTGGCAAAAATG 57.981 50.000 0.00 0.00 37.47 2.32
2790 3275 7.291411 TCTCTATCCTACAATGTAAAGCCTC 57.709 40.000 0.00 0.00 0.00 4.70
2791 3276 7.676683 TTCTCTATCCTACAATGTAAAGCCT 57.323 36.000 0.00 0.00 0.00 4.58
2792 3277 9.646427 CTATTCTCTATCCTACAATGTAAAGCC 57.354 37.037 0.00 0.00 0.00 4.35
2824 3488 4.071423 TCACTCGCTTGATTGAAAATGGA 58.929 39.130 0.00 0.00 29.37 3.41
2825 3489 4.409570 CTCACTCGCTTGATTGAAAATGG 58.590 43.478 0.00 0.00 31.76 3.16
2833 3497 3.319137 TTACTGCTCACTCGCTTGATT 57.681 42.857 0.00 0.00 0.00 2.57
2834 3498 3.533606 ATTACTGCTCACTCGCTTGAT 57.466 42.857 0.00 0.00 0.00 2.57
2836 3500 4.025396 CCAATATTACTGCTCACTCGCTTG 60.025 45.833 0.00 0.00 0.00 4.01
2837 3501 4.122776 CCAATATTACTGCTCACTCGCTT 58.877 43.478 0.00 0.00 0.00 4.68
2840 3504 4.742167 CAGTCCAATATTACTGCTCACTCG 59.258 45.833 5.62 0.00 36.96 4.18
2841 3505 5.521735 CACAGTCCAATATTACTGCTCACTC 59.478 44.000 15.36 0.00 45.65 3.51
2849 3514 9.959721 AAGATAACAACACAGTCCAATATTACT 57.040 29.630 0.00 0.00 0.00 2.24
2891 3556 2.650322 TCCAGTTCTGTTTGGTCAACC 58.350 47.619 0.00 0.00 35.89 3.77
2916 3597 3.571401 AGCATGAAGTTTGAGGTTTGGAG 59.429 43.478 0.00 0.00 0.00 3.86
2933 3614 8.563123 AATCCTCTATATGTTGAATGAGCATG 57.437 34.615 0.00 0.00 0.00 4.06
2952 3679 8.451748 GTGGATTTTGAGTAAGTTGTAATCCTC 58.548 37.037 0.00 0.00 39.97 3.71
2963 3690 5.695851 AAGTGCAGTGGATTTTGAGTAAG 57.304 39.130 0.00 0.00 0.00 2.34
3029 3765 7.926018 ACATAGAAACTAAAAAGGGTGCTTTTG 59.074 33.333 0.00 0.00 36.74 2.44
3036 3772 9.802039 TTGATGTACATAGAAACTAAAAAGGGT 57.198 29.630 8.71 0.00 0.00 4.34
3164 3906 5.535030 ACTTTGTAAGTGGTTTGATCCTTCC 59.465 40.000 0.00 0.00 41.01 3.46
3357 4099 1.045407 AGTACAACACCTTCTCCGCA 58.955 50.000 0.00 0.00 0.00 5.69
3492 4234 2.847234 AACCCACTCGTCTGCCCA 60.847 61.111 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.