Multiple sequence alignment - TraesCS2D01G430000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G430000 chr2D 100.000 8022 0 0 1 8022 542247404 542255425 0.000000e+00 14814.0
1 TraesCS2D01G430000 chr2D 97.872 94 2 0 659 752 478107674 478107581 6.440000e-36 163.0
2 TraesCS2D01G430000 chr2D 97.872 94 1 1 658 751 218346747 218346839 2.320000e-35 161.0
3 TraesCS2D01G430000 chr2D 94.737 38 2 0 2500 2537 640020479 640020442 8.690000e-05 60.2
4 TraesCS2D01G430000 chr2A 94.647 5324 194 39 2739 8022 685219320 685224592 0.000000e+00 8168.0
5 TraesCS2D01G430000 chr2A 95.164 1737 65 9 754 2484 685217598 685219321 0.000000e+00 2724.0
6 TraesCS2D01G430000 chr2A 78.467 274 45 8 7058 7318 685384202 685384474 4.980000e-37 167.0
7 TraesCS2D01G430000 chr2A 79.200 125 14 8 281 400 45182260 45182377 8.630000e-10 76.8
8 TraesCS2D01G430000 chr2A 93.878 49 3 0 2490 2538 23956830 23956782 3.100000e-09 75.0
9 TraesCS2D01G430000 chr2A 100.000 28 0 0 13 40 131311588 131311561 1.500000e-02 52.8
10 TraesCS2D01G430000 chr2A 100.000 28 0 0 128 155 685212304 685212331 1.500000e-02 52.8
11 TraesCS2D01G430000 chr2B 94.726 3053 102 32 4744 7778 647314517 647317528 0.000000e+00 4691.0
12 TraesCS2D01G430000 chr2B 96.612 1889 44 6 2883 4752 647311134 647313021 0.000000e+00 3116.0
13 TraesCS2D01G430000 chr2B 94.473 1158 31 9 1725 2857 647309986 647311135 0.000000e+00 1753.0
14 TraesCS2D01G430000 chr2B 94.505 1001 29 8 749 1731 647308875 647309867 0.000000e+00 1520.0
15 TraesCS2D01G430000 chr2B 85.439 467 31 18 1 451 647308441 647308886 1.230000e-122 451.0
16 TraesCS2D01G430000 chr2B 83.065 248 23 5 7553 7795 647410822 647411055 2.930000e-49 207.0
17 TraesCS2D01G430000 chr2B 92.063 126 10 0 7894 8019 647317658 647317783 2.300000e-40 178.0
18 TraesCS2D01G430000 chr2B 88.889 54 3 1 7654 7707 647567285 647567335 6.720000e-06 63.9
19 TraesCS2D01G430000 chr7A 92.000 250 18 2 2490 2738 203037550 203037798 4.610000e-92 350.0
20 TraesCS2D01G430000 chr7B 90.040 251 21 4 2490 2738 191893738 191893490 1.000000e-83 322.0
21 TraesCS2D01G430000 chr6D 96.842 190 5 1 451 640 464217343 464217531 4.670000e-82 316.0
22 TraesCS2D01G430000 chr6D 98.936 94 1 0 658 751 464217661 464217754 1.380000e-37 169.0
23 TraesCS2D01G430000 chr7D 96.825 189 5 1 452 640 575689931 575690118 1.680000e-81 315.0
24 TraesCS2D01G430000 chr7D 96.316 190 6 1 451 640 500285397 500285585 2.170000e-80 311.0
25 TraesCS2D01G430000 chr7D 94.764 191 9 1 450 640 620116079 620115890 6.090000e-76 296.0
26 TraesCS2D01G430000 chr7D 97.938 97 2 0 658 754 575690249 575690345 1.380000e-37 169.0
27 TraesCS2D01G430000 chr7D 100.000 28 0 0 11 38 607050624 607050651 1.500000e-02 52.8
28 TraesCS2D01G430000 chr1D 95.833 192 8 0 449 640 53867446 53867637 2.170000e-80 311.0
29 TraesCS2D01G430000 chr1D 96.316 190 6 1 452 641 61488287 61488475 2.170000e-80 311.0
30 TraesCS2D01G430000 chr1D 94.211 190 10 1 451 640 342791852 342791664 1.020000e-73 289.0
31 TraesCS2D01G430000 chr1D 93.333 195 11 2 450 644 349344884 349344692 3.660000e-73 287.0
32 TraesCS2D01G430000 chr1D 97.917 96 2 0 658 753 53867767 53867862 4.980000e-37 167.0
33 TraesCS2D01G430000 chr1D 97.872 94 2 0 658 751 61488575 61488668 6.440000e-36 163.0
34 TraesCS2D01G430000 chr1D 96.875 96 2 1 660 755 316302055 316301961 8.330000e-35 159.0
35 TraesCS2D01G430000 chr3D 94.764 191 6 4 452 641 451374062 451374249 2.190000e-75 294.0
36 TraesCS2D01G430000 chr3D 96.939 98 2 1 658 755 172378393 172378297 6.440000e-36 163.0
37 TraesCS2D01G430000 chr3D 95.098 102 3 2 658 759 451374346 451374445 8.330000e-35 159.0
38 TraesCS2D01G430000 chr6B 91.133 203 15 3 2537 2738 680938941 680939141 1.030000e-68 272.0
39 TraesCS2D01G430000 chr3B 100.000 85 0 0 6022 6106 745200749 745200665 3.000000e-34 158.0
40 TraesCS2D01G430000 chr3B 85.714 70 6 3 10 77 438383350 438383417 4.020000e-08 71.3
41 TraesCS2D01G430000 chr3B 93.182 44 3 0 2494 2537 42142150 42142193 1.870000e-06 65.8
42 TraesCS2D01G430000 chr6A 81.818 154 16 7 2490 2637 98319649 98319502 1.410000e-22 119.0
43 TraesCS2D01G430000 chr6A 93.182 44 3 0 2494 2537 94220330 94220373 1.870000e-06 65.8
44 TraesCS2D01G430000 chrUn 91.463 82 5 2 2655 2736 108825559 108825480 2.370000e-20 111.0
45 TraesCS2D01G430000 chrUn 94.286 35 2 0 7655 7689 116695860 116695826 4.000000e-03 54.7
46 TraesCS2D01G430000 chrUn 94.286 35 2 0 7655 7689 180281933 180281899 4.000000e-03 54.7
47 TraesCS2D01G430000 chr3A 81.373 102 11 7 299 395 597188448 597188546 8.630000e-10 76.8
48 TraesCS2D01G430000 chr4D 84.932 73 3 6 299 367 359202935 359203003 5.200000e-07 67.6
49 TraesCS2D01G430000 chr5A 95.000 40 1 1 308 347 502521384 502521346 2.420000e-05 62.1
50 TraesCS2D01G430000 chr1A 100.000 30 0 0 7661 7690 21100449 21100478 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G430000 chr2D 542247404 542255425 8021 False 14814.0 14814 100.000000 1 8022 1 chr2D.!!$F2 8021
1 TraesCS2D01G430000 chr2A 685217598 685224592 6994 False 5446.0 8168 94.905500 754 8022 2 chr2A.!!$F4 7268
2 TraesCS2D01G430000 chr2B 647308441 647317783 9342 False 1951.5 4691 92.969667 1 8019 6 chr2B.!!$F3 8018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 612 0.039256 TGAGGTGCGCTGCAAAAATC 60.039 50.000 9.73 0.00 41.47 2.17 F
1394 1428 0.179000 GATTGTGCCGAGGATCTGGT 59.821 55.000 0.00 0.00 32.58 4.00 F
1825 1991 1.546923 TGTTGTATTCCGAGGAGCGAA 59.453 47.619 0.00 0.00 44.57 4.70 F
3642 3853 0.387565 TCTGTACACGAAGCTGTGCA 59.612 50.000 4.18 0.00 43.74 4.57 F
3780 3992 1.383523 GAAGGCACACCATAAGGAGC 58.616 55.000 0.00 0.00 39.06 4.70 F
4168 4381 3.010027 TGGGCAGTCTATTGGTTTCATGA 59.990 43.478 0.00 0.00 0.00 3.07 F
4288 4501 3.598019 TTCCTTGCAGCCATTTGAATC 57.402 42.857 0.00 0.00 0.00 2.52 F
6196 7928 2.195956 GCCTCTGGTTATGGGCCC 59.804 66.667 17.59 17.59 38.77 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 1981 0.109086 ACAGTCACATTCGCTCCTCG 60.109 55.000 0.00 0.00 40.15 4.63 R
2635 2825 1.599797 TGTCTGAGGCGAGTCGACA 60.600 57.895 22.73 9.82 37.34 4.35 R
3731 3943 0.806102 CCGACAAGCCACTGGATACG 60.806 60.000 0.00 0.12 42.51 3.06 R
5482 7211 2.216898 GAGTATGATGCTTGCCCTGAC 58.783 52.381 0.00 0.00 0.00 3.51 R
5585 7314 3.195396 TGAATGGCAAAAATAGAGCACCC 59.805 43.478 0.00 0.00 0.00 4.61 R
5687 7418 9.527157 TTTTATCTTTTGGAGTCATATCAACCA 57.473 29.630 0.00 0.00 0.00 3.67 R
6211 7943 5.619220 ACCTCTTCTGCCAGATTCATAATC 58.381 41.667 0.00 0.00 38.20 1.75 R
7190 8924 2.361610 AAGGTTCAGCATGCCCCG 60.362 61.111 15.66 3.24 34.76 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 3.899734 TGTCAATTTCAAGATGTTGCCG 58.100 40.909 0.00 0.00 33.23 5.69
50 51 1.872952 CAAGATGTTGCCGTGAGTCAA 59.127 47.619 0.00 0.00 0.00 3.18
73 74 8.090831 TCAATATCTCGAAGATGTTCATAAGGG 58.909 37.037 3.24 0.00 34.43 3.95
85 91 8.811017 AGATGTTCATAAGGGTAGAGATACATG 58.189 37.037 0.00 0.00 0.00 3.21
110 116 9.489084 TGTGTTTATAGGATTGAGTGTATATGC 57.511 33.333 0.00 0.00 0.00 3.14
111 117 8.648097 GTGTTTATAGGATTGAGTGTATATGCG 58.352 37.037 0.00 0.00 0.00 4.73
112 118 8.364894 TGTTTATAGGATTGAGTGTATATGCGT 58.635 33.333 0.00 0.00 0.00 5.24
113 119 8.648097 GTTTATAGGATTGAGTGTATATGCGTG 58.352 37.037 0.00 0.00 0.00 5.34
114 120 4.672587 AGGATTGAGTGTATATGCGTGT 57.327 40.909 0.00 0.00 0.00 4.49
115 121 5.023533 AGGATTGAGTGTATATGCGTGTT 57.976 39.130 0.00 0.00 0.00 3.32
116 122 6.156748 AGGATTGAGTGTATATGCGTGTTA 57.843 37.500 0.00 0.00 0.00 2.41
117 123 5.983720 AGGATTGAGTGTATATGCGTGTTAC 59.016 40.000 0.00 0.00 0.00 2.50
118 124 5.176958 GGATTGAGTGTATATGCGTGTTACC 59.823 44.000 0.00 0.00 0.00 2.85
119 125 3.697982 TGAGTGTATATGCGTGTTACCG 58.302 45.455 0.00 0.00 0.00 4.02
120 126 3.129113 TGAGTGTATATGCGTGTTACCGT 59.871 43.478 0.00 0.00 0.00 4.83
121 127 3.441163 AGTGTATATGCGTGTTACCGTG 58.559 45.455 0.00 0.00 0.00 4.94
122 128 2.034339 GTGTATATGCGTGTTACCGTGC 60.034 50.000 0.00 0.00 0.00 5.34
123 129 1.188573 GTATATGCGTGTTACCGTGCG 59.811 52.381 0.00 0.00 0.00 5.34
124 130 0.179132 ATATGCGTGTTACCGTGCGA 60.179 50.000 0.00 0.00 0.00 5.10
125 131 0.179132 TATGCGTGTTACCGTGCGAT 60.179 50.000 0.00 0.00 0.00 4.58
145 151 5.051374 GCGATTCATAAAGAAGAGACGAAGG 60.051 44.000 0.00 0.00 40.15 3.46
166 172 3.312828 GCATGGTATTCGCTACTGAGAG 58.687 50.000 0.00 0.00 0.00 3.20
201 207 1.748329 CGGATTCAGATGAGCCCGGA 61.748 60.000 0.73 0.00 37.27 5.14
202 208 0.469917 GGATTCAGATGAGCCCGGAA 59.530 55.000 0.73 0.00 0.00 4.30
216 222 2.028567 GCCCGGAAATGAACAATTCCAA 60.029 45.455 17.95 0.00 44.35 3.53
228 234 6.523840 TGAACAATTCCAAGATTTGAAAGGG 58.476 36.000 6.30 0.00 30.50 3.95
239 245 8.421002 CCAAGATTTGAAAGGGAAAAAGAGTTA 58.579 33.333 0.00 0.00 0.00 2.24
274 280 1.527034 TGTGGTGCAAGATGCTTCTC 58.473 50.000 2.09 0.00 45.31 2.87
275 281 1.202794 TGTGGTGCAAGATGCTTCTCA 60.203 47.619 2.09 0.00 45.31 3.27
276 282 1.881973 GTGGTGCAAGATGCTTCTCAA 59.118 47.619 2.09 0.00 45.31 3.02
278 284 2.157738 GGTGCAAGATGCTTCTCAACT 58.842 47.619 2.09 0.00 45.31 3.16
330 349 0.657368 CTTTTGCACGGAGTTCACGC 60.657 55.000 0.00 0.00 41.61 5.34
344 363 3.384789 AGTTCACGCATAGGAGCATCTTA 59.615 43.478 0.00 0.00 33.73 2.10
349 368 5.185828 TCACGCATAGGAGCATCTTACATAT 59.814 40.000 0.00 0.00 33.73 1.78
350 369 5.871524 CACGCATAGGAGCATCTTACATATT 59.128 40.000 0.00 0.00 33.73 1.28
352 371 6.591834 ACGCATAGGAGCATCTTACATATTTC 59.408 38.462 0.00 0.00 33.73 2.17
429 451 5.909477 TGGGTTGAATTATCTATCGTTCGT 58.091 37.500 0.00 0.00 0.00 3.85
442 464 6.773080 TCTATCGTTCGTTACTCTTCTTCAG 58.227 40.000 0.00 0.00 0.00 3.02
443 465 4.825546 TCGTTCGTTACTCTTCTTCAGT 57.174 40.909 0.00 0.00 0.00 3.41
444 466 5.929697 TCGTTCGTTACTCTTCTTCAGTA 57.070 39.130 0.00 0.00 0.00 2.74
445 467 6.492007 TCGTTCGTTACTCTTCTTCAGTAT 57.508 37.500 0.00 0.00 0.00 2.12
446 468 6.906659 TCGTTCGTTACTCTTCTTCAGTATT 58.093 36.000 0.00 0.00 0.00 1.89
447 469 6.800408 TCGTTCGTTACTCTTCTTCAGTATTG 59.200 38.462 0.00 0.00 0.00 1.90
448 470 6.800408 CGTTCGTTACTCTTCTTCAGTATTGA 59.200 38.462 0.00 0.00 0.00 2.57
449 471 7.325338 CGTTCGTTACTCTTCTTCAGTATTGAA 59.675 37.037 0.34 0.34 40.92 2.69
458 480 2.672961 TCAGTATTGAAGGAGTGCGG 57.327 50.000 0.00 0.00 0.00 5.69
459 481 1.009829 CAGTATTGAAGGAGTGCGGC 58.990 55.000 0.00 0.00 0.00 6.53
460 482 0.460284 AGTATTGAAGGAGTGCGGCG 60.460 55.000 0.51 0.51 0.00 6.46
461 483 0.459585 GTATTGAAGGAGTGCGGCGA 60.460 55.000 12.98 0.00 0.00 5.54
462 484 0.464036 TATTGAAGGAGTGCGGCGAT 59.536 50.000 12.98 0.00 0.00 4.58
463 485 0.392998 ATTGAAGGAGTGCGGCGATT 60.393 50.000 12.98 0.00 0.00 3.34
464 486 0.605319 TTGAAGGAGTGCGGCGATTT 60.605 50.000 12.98 0.00 0.00 2.17
465 487 1.298157 TGAAGGAGTGCGGCGATTTG 61.298 55.000 12.98 0.00 0.00 2.32
466 488 1.982073 GAAGGAGTGCGGCGATTTGG 61.982 60.000 12.98 0.00 0.00 3.28
467 489 4.179579 GGAGTGCGGCGATTTGGC 62.180 66.667 12.98 0.00 40.44 4.52
468 490 3.127533 GAGTGCGGCGATTTGGCT 61.128 61.111 12.98 0.00 42.02 4.75
469 491 3.100862 GAGTGCGGCGATTTGGCTC 62.101 63.158 12.98 4.10 42.02 4.70
470 492 4.179579 GTGCGGCGATTTGGCTCC 62.180 66.667 12.98 0.00 42.02 4.70
476 498 4.489771 CGATTTGGCTCCCGGGCT 62.490 66.667 18.49 0.00 41.48 5.19
477 499 2.517166 GATTTGGCTCCCGGGCTC 60.517 66.667 18.49 9.71 41.48 4.70
478 500 3.338250 ATTTGGCTCCCGGGCTCA 61.338 61.111 18.49 11.07 41.48 4.26
479 501 2.631012 GATTTGGCTCCCGGGCTCAT 62.631 60.000 18.49 0.87 41.48 2.90
480 502 2.631012 ATTTGGCTCCCGGGCTCATC 62.631 60.000 18.49 3.79 41.48 2.92
481 503 4.804420 TGGCTCCCGGGCTCATCT 62.804 66.667 18.49 0.00 41.48 2.90
482 504 4.247380 GGCTCCCGGGCTCATCTG 62.247 72.222 18.49 0.33 37.53 2.90
483 505 4.925861 GCTCCCGGGCTCATCTGC 62.926 72.222 18.49 7.22 0.00 4.26
484 506 3.473647 CTCCCGGGCTCATCTGCA 61.474 66.667 18.49 0.00 34.04 4.41
485 507 3.746949 CTCCCGGGCTCATCTGCAC 62.747 68.421 18.49 0.00 34.04 4.57
486 508 4.864334 CCCGGGCTCATCTGCACC 62.864 72.222 8.08 0.00 31.60 5.01
487 509 4.864334 CCGGGCTCATCTGCACCC 62.864 72.222 0.00 0.00 39.12 4.61
492 514 4.827087 CTCATCTGCACCCGCGCT 62.827 66.667 5.56 0.00 42.97 5.92
493 515 4.819761 TCATCTGCACCCGCGCTC 62.820 66.667 5.56 0.00 42.97 5.03
566 588 8.459911 AAAAATTCGGGTGGTAGATAATTAGG 57.540 34.615 0.00 0.00 0.00 2.69
567 589 6.758806 AATTCGGGTGGTAGATAATTAGGT 57.241 37.500 0.00 0.00 0.00 3.08
568 590 5.540400 TTCGGGTGGTAGATAATTAGGTG 57.460 43.478 0.00 0.00 0.00 4.00
569 591 3.322828 TCGGGTGGTAGATAATTAGGTGC 59.677 47.826 0.00 0.00 0.00 5.01
570 592 3.660865 GGGTGGTAGATAATTAGGTGCG 58.339 50.000 0.00 0.00 0.00 5.34
571 593 3.070590 GGGTGGTAGATAATTAGGTGCGT 59.929 47.826 0.00 0.00 0.00 5.24
572 594 4.056050 GGTGGTAGATAATTAGGTGCGTG 58.944 47.826 0.00 0.00 0.00 5.34
573 595 4.202182 GGTGGTAGATAATTAGGTGCGTGA 60.202 45.833 0.00 0.00 0.00 4.35
574 596 4.982916 GTGGTAGATAATTAGGTGCGTGAG 59.017 45.833 0.00 0.00 0.00 3.51
575 597 4.038763 TGGTAGATAATTAGGTGCGTGAGG 59.961 45.833 0.00 0.00 0.00 3.86
576 598 4.038883 GGTAGATAATTAGGTGCGTGAGGT 59.961 45.833 0.00 0.00 0.00 3.85
577 599 4.060038 AGATAATTAGGTGCGTGAGGTG 57.940 45.455 0.00 0.00 0.00 4.00
578 600 2.018542 TAATTAGGTGCGTGAGGTGC 57.981 50.000 0.00 0.00 0.00 5.01
579 601 1.019278 AATTAGGTGCGTGAGGTGCG 61.019 55.000 0.00 0.00 34.24 5.34
586 608 3.648982 CGTGAGGTGCGCTGCAAA 61.649 61.111 9.73 0.00 41.47 3.68
587 609 2.721231 GTGAGGTGCGCTGCAAAA 59.279 55.556 9.73 0.00 41.47 2.44
588 610 1.065600 GTGAGGTGCGCTGCAAAAA 59.934 52.632 9.73 0.00 41.47 1.94
589 611 0.318955 GTGAGGTGCGCTGCAAAAAT 60.319 50.000 9.73 0.00 41.47 1.82
590 612 0.039256 TGAGGTGCGCTGCAAAAATC 60.039 50.000 9.73 0.00 41.47 2.17
591 613 0.039256 GAGGTGCGCTGCAAAAATCA 60.039 50.000 9.73 0.00 41.47 2.57
592 614 0.388659 AGGTGCGCTGCAAAAATCAA 59.611 45.000 9.73 0.00 41.47 2.57
593 615 0.508213 GGTGCGCTGCAAAAATCAAC 59.492 50.000 9.73 0.00 41.47 3.18
594 616 1.490621 GTGCGCTGCAAAAATCAACT 58.509 45.000 9.73 0.00 41.47 3.16
595 617 1.453148 GTGCGCTGCAAAAATCAACTC 59.547 47.619 9.73 0.00 41.47 3.01
596 618 0.704551 GCGCTGCAAAAATCAACTCG 59.295 50.000 0.00 0.00 0.00 4.18
597 619 1.925946 GCGCTGCAAAAATCAACTCGT 60.926 47.619 0.00 0.00 0.00 4.18
598 620 2.384382 CGCTGCAAAAATCAACTCGTT 58.616 42.857 0.00 0.00 0.00 3.85
599 621 2.788786 CGCTGCAAAAATCAACTCGTTT 59.211 40.909 0.00 0.00 0.00 3.60
600 622 3.360956 CGCTGCAAAAATCAACTCGTTTG 60.361 43.478 0.00 0.00 36.42 2.93
601 623 3.060339 GCTGCAAAAATCAACTCGTTTGG 60.060 43.478 0.00 0.00 35.69 3.28
602 624 4.358851 CTGCAAAAATCAACTCGTTTGGA 58.641 39.130 0.00 0.00 35.69 3.53
603 625 4.109050 TGCAAAAATCAACTCGTTTGGAC 58.891 39.130 0.00 0.00 35.69 4.02
604 626 4.109050 GCAAAAATCAACTCGTTTGGACA 58.891 39.130 0.00 0.00 35.69 4.02
605 627 4.744631 GCAAAAATCAACTCGTTTGGACAT 59.255 37.500 0.00 0.00 35.69 3.06
606 628 5.234116 GCAAAAATCAACTCGTTTGGACATT 59.766 36.000 0.00 0.00 35.69 2.71
607 629 6.238076 GCAAAAATCAACTCGTTTGGACATTT 60.238 34.615 0.00 0.00 35.69 2.32
608 630 6.826893 AAAATCAACTCGTTTGGACATTTG 57.173 33.333 0.69 0.00 35.69 2.32
609 631 5.766150 AATCAACTCGTTTGGACATTTGA 57.234 34.783 0.69 0.00 35.69 2.69
610 632 4.811555 TCAACTCGTTTGGACATTTGAG 57.188 40.909 0.69 0.00 35.69 3.02
611 633 3.003275 TCAACTCGTTTGGACATTTGAGC 59.997 43.478 0.69 0.00 35.69 4.26
612 634 2.571212 ACTCGTTTGGACATTTGAGCA 58.429 42.857 0.00 0.00 0.00 4.26
613 635 2.948979 ACTCGTTTGGACATTTGAGCAA 59.051 40.909 0.00 0.00 0.00 3.91
614 636 3.003689 ACTCGTTTGGACATTTGAGCAAG 59.996 43.478 0.00 0.00 0.00 4.01
615 637 2.948979 TCGTTTGGACATTTGAGCAAGT 59.051 40.909 0.00 0.00 0.00 3.16
616 638 3.003275 TCGTTTGGACATTTGAGCAAGTC 59.997 43.478 0.00 0.00 0.00 3.01
617 639 3.003689 CGTTTGGACATTTGAGCAAGTCT 59.996 43.478 0.00 0.00 0.00 3.24
618 640 4.293415 GTTTGGACATTTGAGCAAGTCTG 58.707 43.478 0.00 0.00 0.00 3.51
619 641 3.213206 TGGACATTTGAGCAAGTCTGT 57.787 42.857 0.00 0.00 0.00 3.41
620 642 2.880268 TGGACATTTGAGCAAGTCTGTG 59.120 45.455 0.00 0.00 0.00 3.66
621 643 2.351157 GGACATTTGAGCAAGTCTGTGC 60.351 50.000 0.00 0.00 45.28 4.57
645 667 5.845391 AAAAAGACAAAATCGGGTGAAGA 57.155 34.783 0.00 0.00 0.00 2.87
646 668 5.438761 AAAAGACAAAATCGGGTGAAGAG 57.561 39.130 0.00 0.00 0.00 2.85
647 669 2.427506 AGACAAAATCGGGTGAAGAGC 58.572 47.619 0.00 0.00 0.00 4.09
648 670 1.468914 GACAAAATCGGGTGAAGAGCC 59.531 52.381 0.00 0.00 36.28 4.70
649 671 0.811281 CAAAATCGGGTGAAGAGCCC 59.189 55.000 0.00 0.00 42.68 5.19
722 744 2.798976 TTTTGCTGAACAGGTGCATC 57.201 45.000 3.99 0.00 36.55 3.91
723 745 1.985473 TTTGCTGAACAGGTGCATCT 58.015 45.000 0.00 0.00 36.55 2.90
724 746 1.241165 TTGCTGAACAGGTGCATCTG 58.759 50.000 25.51 25.51 40.40 2.90
725 747 0.397564 TGCTGAACAGGTGCATCTGA 59.602 50.000 33.21 10.40 38.11 3.27
726 748 1.085091 GCTGAACAGGTGCATCTGAG 58.915 55.000 33.21 20.41 38.11 3.35
727 749 1.085091 CTGAACAGGTGCATCTGAGC 58.915 55.000 33.21 22.39 38.11 4.26
728 750 0.321919 TGAACAGGTGCATCTGAGCC 60.322 55.000 33.21 19.72 38.11 4.70
729 751 1.001641 AACAGGTGCATCTGAGCCC 60.002 57.895 33.21 6.56 38.11 5.19
730 752 2.513204 CAGGTGCATCTGAGCCCG 60.513 66.667 23.04 0.00 36.93 6.13
731 753 3.790437 AGGTGCATCTGAGCCCGG 61.790 66.667 0.00 0.00 32.32 5.73
732 754 4.864334 GGTGCATCTGAGCCCGGG 62.864 72.222 19.09 19.09 0.00 5.73
1017 1040 4.162690 ATGGCTCGCCGGTCTTCC 62.163 66.667 1.90 0.17 39.42 3.46
1264 1288 1.737793 CGGCCAAGTAGCTTCGAATTT 59.262 47.619 2.24 0.00 0.00 1.82
1394 1428 0.179000 GATTGTGCCGAGGATCTGGT 59.821 55.000 0.00 0.00 32.58 4.00
1442 1476 8.681486 TTTGTCTGAGATTTGATCTTTTGAGA 57.319 30.769 0.00 0.00 40.38 3.27
1462 1496 5.162892 TGAGAGAGTGGATCTTATGAGGGAT 60.163 44.000 0.00 0.00 38.84 3.85
1475 1509 3.619900 TGAGGGATCACTAGGCTACAT 57.380 47.619 0.00 0.00 0.00 2.29
1489 1523 5.692613 AGGCTACATCTCAACTATACGTC 57.307 43.478 0.00 0.00 0.00 4.34
1514 1548 9.826574 TCTGTAACGATTATTGGTATTAGCTTT 57.173 29.630 0.00 0.00 0.00 3.51
1563 1598 1.595609 GCGAAGAATTGTGCGTCTTG 58.404 50.000 4.71 0.00 34.23 3.02
1628 1668 7.337184 AGGTACTTTAGCAGCTTAGATTTTTCC 59.663 37.037 0.00 0.00 27.25 3.13
1634 1674 3.091545 CAGCTTAGATTTTTCCCAGGCA 58.908 45.455 0.00 0.00 0.00 4.75
1825 1991 1.546923 TGTTGTATTCCGAGGAGCGAA 59.453 47.619 0.00 0.00 44.57 4.70
1829 1995 2.128035 GTATTCCGAGGAGCGAATGTG 58.872 52.381 0.00 0.00 44.57 3.21
1928 2102 7.174253 TGTTCATTGGGACTTGTTATGAGTAAC 59.826 37.037 0.00 0.00 40.48 2.50
2036 2212 4.500545 CCTTCTCAGTAATCGGATGAGTGG 60.501 50.000 9.79 7.98 41.01 4.00
2485 2675 2.794103 TGTGCTTGTTGGCATGATAGT 58.206 42.857 0.00 0.00 44.34 2.12
2581 2771 5.424757 TGTACATGTAACCAATCCAGTAGC 58.575 41.667 7.25 0.00 0.00 3.58
2635 2825 1.107538 GCATGCATCCATCCAGCACT 61.108 55.000 14.21 0.00 41.60 4.40
2646 2836 2.807045 CAGCACTGTCGACTCGCC 60.807 66.667 17.92 3.05 0.00 5.54
2668 2858 4.440802 CCTCAGACACTGACTAATGCCTAC 60.441 50.000 0.00 0.00 35.39 3.18
2792 2983 2.827322 TGAGATTTTGGGATGCACTTGG 59.173 45.455 0.00 0.00 0.00 3.61
2813 3004 2.888834 AAATGTGTTCTTGCCGCTTT 57.111 40.000 0.00 0.00 0.00 3.51
2861 3052 2.697654 AGACATGCAGTTCAGCTTCTC 58.302 47.619 0.00 0.00 34.99 2.87
2863 3054 2.672381 GACATGCAGTTCAGCTTCTCTC 59.328 50.000 0.00 0.00 34.99 3.20
2892 3084 2.099141 TGAAGAAAGGCATCGAGTGG 57.901 50.000 0.00 0.00 0.00 4.00
2993 3185 4.045104 CAGTCTGAGATTTCCCGATTACG 58.955 47.826 0.00 0.00 39.43 3.18
3031 3223 3.541996 TGCATGGTCAGGTATGTACTG 57.458 47.619 0.00 0.00 37.30 2.74
3396 3606 1.946768 CGTTCTTCACCTTTTCAGCCA 59.053 47.619 0.00 0.00 0.00 4.75
3642 3853 0.387565 TCTGTACACGAAGCTGTGCA 59.612 50.000 4.18 0.00 43.74 4.57
3731 3943 2.044123 ACTCGAATTGGATGGCCTTC 57.956 50.000 10.18 10.18 34.31 3.46
3780 3992 1.383523 GAAGGCACACCATAAGGAGC 58.616 55.000 0.00 0.00 39.06 4.70
4073 4286 7.933033 AGGCTTATTGGGCATTTATGTATTTTG 59.067 33.333 0.00 0.00 0.00 2.44
4168 4381 3.010027 TGGGCAGTCTATTGGTTTCATGA 59.990 43.478 0.00 0.00 0.00 3.07
4288 4501 3.598019 TTCCTTGCAGCCATTTGAATC 57.402 42.857 0.00 0.00 0.00 2.52
4497 4714 5.653330 CCATATTGCCATGTAGCCATATCAA 59.347 40.000 0.00 0.00 30.80 2.57
4764 6485 8.989131 TCTATTTTCCATTAAGTACCTACTGCT 58.011 33.333 0.00 0.00 36.50 4.24
4801 6522 9.874205 CCTTCCAAACACATGAATATTACAATT 57.126 29.630 0.00 0.00 0.00 2.32
4999 6721 9.108284 CATTTCACCTCAACCTATTTTGTTTTT 57.892 29.630 0.00 0.00 0.00 1.94
5146 6868 7.334421 TCAGCTGAAGGTTAGTATTTCATTCAC 59.666 37.037 15.67 0.00 31.11 3.18
5148 6870 6.374333 GCTGAAGGTTAGTATTTCATTCACCA 59.626 38.462 0.00 0.00 31.11 4.17
5194 6917 5.472137 TGGGACAATTCTTGTTACTAAGTGC 59.528 40.000 0.00 0.00 45.52 4.40
5263 6987 5.656416 AGTGGAAGTTTTCTTGTTGGATTCA 59.344 36.000 0.00 0.00 40.61 2.57
5545 7274 8.049721 GCTATGGGAGATAGGTAATGCTATTTT 58.950 37.037 0.00 0.00 0.00 1.82
5563 7292 8.736244 TGCTATTTTTCCTACTATTTGAACCAC 58.264 33.333 0.00 0.00 0.00 4.16
5669 7398 7.627311 TGATCTATCTTATTGGACCATGGATG 58.373 38.462 21.47 0.00 0.00 3.51
6196 7928 2.195956 GCCTCTGGTTATGGGCCC 59.804 66.667 17.59 17.59 38.77 5.80
6211 7943 1.067846 GGGCCCGAAAAAGCTAAACAG 60.068 52.381 5.69 0.00 0.00 3.16
6237 7969 4.478206 TGAATCTGGCAGAAGAGGTAAG 57.522 45.455 22.84 0.00 0.00 2.34
6384 8116 1.480545 ACCAAACAACTCCCACAAAGC 59.519 47.619 0.00 0.00 0.00 3.51
6425 8157 1.045407 TCCACGCTGAACAGGTAGTT 58.955 50.000 3.99 0.00 44.93 2.24
6427 8159 2.629137 TCCACGCTGAACAGGTAGTTTA 59.371 45.455 3.99 0.00 41.51 2.01
6505 8238 5.376854 AAACAATGTCATCAACTAGTGGC 57.623 39.130 0.00 0.00 0.00 5.01
6531 8264 9.347240 CACTTTCCAACTTCATAGGATATGAAT 57.653 33.333 11.52 0.00 37.40 2.57
6723 8456 0.842030 AGTGCCACCTTCCATCCTCA 60.842 55.000 0.00 0.00 0.00 3.86
6747 8480 0.923358 TCCCCACTGAAAACACCTGT 59.077 50.000 0.00 0.00 0.00 4.00
6975 8708 3.456280 GCCAGTCAATTGAAACTGCAAA 58.544 40.909 17.68 0.00 41.24 3.68
7091 8824 3.074412 CCTGCCTTGTTGAGAACGTTAT 58.926 45.455 0.00 0.00 0.00 1.89
7190 8924 5.690464 AGGTAGAGCATGATGGATAATCC 57.310 43.478 0.00 0.00 36.96 3.01
7273 9007 2.235155 TCAAACTTGCCTATGCTCCGTA 59.765 45.455 0.00 0.00 38.71 4.02
7425 9166 7.547722 ACATTTTGTTAGGACTTTTGGAAACAC 59.452 33.333 0.00 0.00 42.67 3.32
7430 9171 2.031870 GGACTTTTGGAAACACTGGCT 58.968 47.619 0.00 0.00 42.67 4.75
7565 9309 9.485206 AAGCAATCATCCATAAAATGAATAAGC 57.515 29.630 0.00 0.00 36.75 3.09
7566 9310 7.811236 AGCAATCATCCATAAAATGAATAAGCG 59.189 33.333 0.00 0.00 36.75 4.68
7567 9311 7.809331 GCAATCATCCATAAAATGAATAAGCGA 59.191 33.333 0.00 0.00 36.75 4.93
7568 9312 9.850628 CAATCATCCATAAAATGAATAAGCGAT 57.149 29.630 0.00 0.00 36.75 4.58
7570 9314 8.620116 TCATCCATAAAATGAATAAGCGATCA 57.380 30.769 0.00 0.00 30.37 2.92
7571 9315 9.234827 TCATCCATAAAATGAATAAGCGATCAT 57.765 29.630 0.00 0.00 37.88 2.45
7572 9316 9.499585 CATCCATAAAATGAATAAGCGATCATC 57.500 33.333 0.00 0.00 35.29 2.92
7573 9317 8.044060 TCCATAAAATGAATAAGCGATCATCC 57.956 34.615 0.00 0.00 35.29 3.51
7574 9318 7.665145 TCCATAAAATGAATAAGCGATCATCCA 59.335 33.333 0.00 0.00 35.29 3.41
7575 9319 8.464404 CCATAAAATGAATAAGCGATCATCCAT 58.536 33.333 0.00 0.00 35.29 3.41
7579 9323 9.683069 AAAATGAATAAGCGATCATCCATAAAC 57.317 29.630 0.00 0.00 35.29 2.01
7580 9324 7.984422 ATGAATAAGCGATCATCCATAAACA 57.016 32.000 0.00 0.00 30.62 2.83
7581 9325 7.800155 TGAATAAGCGATCATCCATAAACAA 57.200 32.000 0.00 0.00 0.00 2.83
7582 9326 8.219546 TGAATAAGCGATCATCCATAAACAAA 57.780 30.769 0.00 0.00 0.00 2.83
7583 9327 8.128582 TGAATAAGCGATCATCCATAAACAAAC 58.871 33.333 0.00 0.00 0.00 2.93
7584 9328 7.807977 ATAAGCGATCATCCATAAACAAACT 57.192 32.000 0.00 0.00 0.00 2.66
7749 9493 7.035612 GGAAATTAATCTTGATTCGCAAAGGT 58.964 34.615 0.00 0.00 35.74 3.50
7828 9577 5.986501 AAATTTGTAAGGGCGTCCATAAA 57.013 34.783 9.71 4.06 34.83 1.40
7830 9579 3.706600 TTGTAAGGGCGTCCATAAACT 57.293 42.857 9.71 0.00 34.83 2.66
7831 9580 4.822685 TTGTAAGGGCGTCCATAAACTA 57.177 40.909 9.71 0.00 34.83 2.24
7832 9581 5.362105 TTGTAAGGGCGTCCATAAACTAT 57.638 39.130 9.71 0.00 34.83 2.12
7840 9599 4.989168 GGCGTCCATAAACTATAACTGGAG 59.011 45.833 0.00 0.00 36.71 3.86
7903 9695 0.755327 AAGGTGGTGACCAGGTTTGC 60.755 55.000 3.58 0.00 45.98 3.68
7929 9721 2.100252 GCTTGATGCTGCATACATTGGT 59.900 45.455 16.23 0.00 38.95 3.67
7949 9741 3.287222 GTGATGCCCTAATGCACCTTAA 58.713 45.455 0.00 0.00 45.48 1.85
7963 9755 6.524101 TGCACCTTAAAGATGTTAATTCCC 57.476 37.500 0.00 0.00 0.00 3.97
8002 9794 5.639082 CCTTCTCTGCAAACAAACAAAAACT 59.361 36.000 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.041635 TGAAATTGACAAAGTCATCACATGT 57.958 32.000 0.12 0.00 42.40 3.21
14 15 7.170320 GCAACATCTTGAAATTGACAAAGTCAT 59.830 33.333 0.12 0.00 42.40 3.06
15 16 6.476380 GCAACATCTTGAAATTGACAAAGTCA 59.524 34.615 0.00 0.00 41.09 3.41
22 23 3.670055 CACGGCAACATCTTGAAATTGAC 59.330 43.478 0.00 0.00 0.00 3.18
42 43 6.975197 TGAACATCTTCGAGATATTGACTCAC 59.025 38.462 0.00 0.00 32.12 3.51
50 51 7.546250 ACCCTTATGAACATCTTCGAGATAT 57.454 36.000 0.00 0.00 32.12 1.63
85 91 8.648097 CGCATATACACTCAATCCTATAAACAC 58.352 37.037 0.00 0.00 0.00 3.32
107 113 1.017177 AATCGCACGGTAACACGCAT 61.017 50.000 0.00 0.00 37.37 4.73
108 114 1.619526 GAATCGCACGGTAACACGCA 61.620 55.000 0.00 0.00 37.37 5.24
109 115 1.058284 GAATCGCACGGTAACACGC 59.942 57.895 0.00 0.00 37.37 5.34
110 116 0.996462 ATGAATCGCACGGTAACACG 59.004 50.000 0.00 0.00 40.31 4.49
111 117 4.327898 TCTTTATGAATCGCACGGTAACAC 59.672 41.667 0.00 0.00 0.00 3.32
112 118 4.496360 TCTTTATGAATCGCACGGTAACA 58.504 39.130 0.00 0.00 0.00 2.41
113 119 5.290158 TCTTCTTTATGAATCGCACGGTAAC 59.710 40.000 0.00 0.00 33.71 2.50
114 120 5.412640 TCTTCTTTATGAATCGCACGGTAA 58.587 37.500 0.00 0.00 33.71 2.85
115 121 5.001237 TCTTCTTTATGAATCGCACGGTA 57.999 39.130 0.00 0.00 33.71 4.02
116 122 3.857052 TCTTCTTTATGAATCGCACGGT 58.143 40.909 0.00 0.00 33.71 4.83
117 123 4.026475 GTCTCTTCTTTATGAATCGCACGG 60.026 45.833 0.00 0.00 33.71 4.94
118 124 4.316722 CGTCTCTTCTTTATGAATCGCACG 60.317 45.833 0.00 0.00 33.71 5.34
119 125 4.798907 TCGTCTCTTCTTTATGAATCGCAC 59.201 41.667 0.00 0.00 33.71 5.34
120 126 4.993905 TCGTCTCTTCTTTATGAATCGCA 58.006 39.130 0.00 0.00 33.71 5.10
121 127 5.051374 CCTTCGTCTCTTCTTTATGAATCGC 60.051 44.000 0.00 0.00 33.71 4.58
122 128 5.051374 GCCTTCGTCTCTTCTTTATGAATCG 60.051 44.000 0.00 0.00 33.71 3.34
123 129 5.812642 TGCCTTCGTCTCTTCTTTATGAATC 59.187 40.000 0.00 0.00 33.71 2.52
124 130 5.734720 TGCCTTCGTCTCTTCTTTATGAAT 58.265 37.500 0.00 0.00 33.71 2.57
125 131 5.147330 TGCCTTCGTCTCTTCTTTATGAA 57.853 39.130 0.00 0.00 0.00 2.57
145 151 3.312828 CTCTCAGTAGCGAATACCATGC 58.687 50.000 0.00 0.00 34.67 4.06
166 172 2.686816 CCGGACACCAAATCACCGC 61.687 63.158 0.00 0.00 41.86 5.68
173 179 2.304470 TCATCTGAATCCGGACACCAAA 59.696 45.455 6.12 0.00 0.00 3.28
201 207 9.059260 CCTTTCAAATCTTGGAATTGTTCATTT 57.941 29.630 0.00 0.00 0.00 2.32
202 208 7.662669 CCCTTTCAAATCTTGGAATTGTTCATT 59.337 33.333 0.00 0.00 0.00 2.57
274 280 1.467734 GTGCAAGATGCTCCTGAGTTG 59.532 52.381 3.78 0.00 45.31 3.16
275 281 1.072806 TGTGCAAGATGCTCCTGAGTT 59.927 47.619 3.78 0.00 45.31 3.01
276 282 0.689055 TGTGCAAGATGCTCCTGAGT 59.311 50.000 3.78 0.00 45.31 3.41
278 284 2.275134 TTTGTGCAAGATGCTCCTGA 57.725 45.000 3.78 0.00 45.31 3.86
309 328 1.063469 CGTGAACTCCGTGCAAAAGTT 59.937 47.619 8.82 8.82 36.00 2.66
317 336 0.172578 TCCTATGCGTGAACTCCGTG 59.827 55.000 0.00 0.00 0.00 4.94
386 408 3.194968 CCAGAGGTAAACAGTACCACGAT 59.805 47.826 5.39 0.00 39.99 3.73
442 464 0.459585 TCGCCGCACTCCTTCAATAC 60.460 55.000 0.00 0.00 0.00 1.89
443 465 0.464036 ATCGCCGCACTCCTTCAATA 59.536 50.000 0.00 0.00 0.00 1.90
444 466 0.392998 AATCGCCGCACTCCTTCAAT 60.393 50.000 0.00 0.00 0.00 2.57
445 467 0.605319 AAATCGCCGCACTCCTTCAA 60.605 50.000 0.00 0.00 0.00 2.69
446 468 1.003839 AAATCGCCGCACTCCTTCA 60.004 52.632 0.00 0.00 0.00 3.02
447 469 1.425428 CAAATCGCCGCACTCCTTC 59.575 57.895 0.00 0.00 0.00 3.46
448 470 2.040544 CCAAATCGCCGCACTCCTT 61.041 57.895 0.00 0.00 0.00 3.36
449 471 2.436646 CCAAATCGCCGCACTCCT 60.437 61.111 0.00 0.00 0.00 3.69
450 472 4.179579 GCCAAATCGCCGCACTCC 62.180 66.667 0.00 0.00 0.00 3.85
451 473 3.100862 GAGCCAAATCGCCGCACTC 62.101 63.158 0.00 0.00 0.00 3.51
452 474 3.127533 GAGCCAAATCGCCGCACT 61.128 61.111 0.00 0.00 0.00 4.40
453 475 4.179579 GGAGCCAAATCGCCGCAC 62.180 66.667 0.00 0.00 0.00 5.34
459 481 4.489771 AGCCCGGGAGCCAAATCG 62.490 66.667 29.31 0.00 0.00 3.34
460 482 2.517166 GAGCCCGGGAGCCAAATC 60.517 66.667 29.31 2.84 0.00 2.17
461 483 2.631012 GATGAGCCCGGGAGCCAAAT 62.631 60.000 29.31 8.04 0.00 2.32
462 484 3.338250 ATGAGCCCGGGAGCCAAA 61.338 61.111 29.31 2.41 0.00 3.28
463 485 3.797353 GATGAGCCCGGGAGCCAA 61.797 66.667 29.31 4.14 0.00 4.52
464 486 4.804420 AGATGAGCCCGGGAGCCA 62.804 66.667 29.31 18.65 0.00 4.75
465 487 4.247380 CAGATGAGCCCGGGAGCC 62.247 72.222 29.31 12.80 0.00 4.70
466 488 4.925861 GCAGATGAGCCCGGGAGC 62.926 72.222 29.31 16.09 0.00 4.70
467 489 3.473647 TGCAGATGAGCCCGGGAG 61.474 66.667 29.31 0.00 0.00 4.30
468 490 3.785859 GTGCAGATGAGCCCGGGA 61.786 66.667 29.31 2.74 0.00 5.14
469 491 4.864334 GGTGCAGATGAGCCCGGG 62.864 72.222 19.09 19.09 0.00 5.73
470 492 4.864334 GGGTGCAGATGAGCCCGG 62.864 72.222 0.00 0.00 0.00 5.73
475 497 4.827087 AGCGCGGGTGCAGATGAG 62.827 66.667 8.83 0.00 42.97 2.90
476 498 4.819761 GAGCGCGGGTGCAGATGA 62.820 66.667 8.83 0.00 42.97 2.92
541 563 8.057011 ACCTAATTATCTACCACCCGAATTTTT 58.943 33.333 0.00 0.00 0.00 1.94
542 564 7.501225 CACCTAATTATCTACCACCCGAATTTT 59.499 37.037 0.00 0.00 0.00 1.82
543 565 6.996282 CACCTAATTATCTACCACCCGAATTT 59.004 38.462 0.00 0.00 0.00 1.82
544 566 6.531021 CACCTAATTATCTACCACCCGAATT 58.469 40.000 0.00 0.00 0.00 2.17
545 567 5.512576 GCACCTAATTATCTACCACCCGAAT 60.513 44.000 0.00 0.00 0.00 3.34
546 568 4.202284 GCACCTAATTATCTACCACCCGAA 60.202 45.833 0.00 0.00 0.00 4.30
547 569 3.322828 GCACCTAATTATCTACCACCCGA 59.677 47.826 0.00 0.00 0.00 5.14
548 570 3.660865 GCACCTAATTATCTACCACCCG 58.339 50.000 0.00 0.00 0.00 5.28
549 571 3.070590 ACGCACCTAATTATCTACCACCC 59.929 47.826 0.00 0.00 0.00 4.61
550 572 4.056050 CACGCACCTAATTATCTACCACC 58.944 47.826 0.00 0.00 0.00 4.61
551 573 4.940463 TCACGCACCTAATTATCTACCAC 58.060 43.478 0.00 0.00 0.00 4.16
552 574 4.038763 CCTCACGCACCTAATTATCTACCA 59.961 45.833 0.00 0.00 0.00 3.25
553 575 4.038883 ACCTCACGCACCTAATTATCTACC 59.961 45.833 0.00 0.00 0.00 3.18
554 576 4.982916 CACCTCACGCACCTAATTATCTAC 59.017 45.833 0.00 0.00 0.00 2.59
555 577 4.500887 GCACCTCACGCACCTAATTATCTA 60.501 45.833 0.00 0.00 0.00 1.98
556 578 3.741388 GCACCTCACGCACCTAATTATCT 60.741 47.826 0.00 0.00 0.00 1.98
557 579 2.544267 GCACCTCACGCACCTAATTATC 59.456 50.000 0.00 0.00 0.00 1.75
558 580 2.561569 GCACCTCACGCACCTAATTAT 58.438 47.619 0.00 0.00 0.00 1.28
559 581 1.737696 CGCACCTCACGCACCTAATTA 60.738 52.381 0.00 0.00 0.00 1.40
560 582 1.019278 CGCACCTCACGCACCTAATT 61.019 55.000 0.00 0.00 0.00 1.40
561 583 1.447838 CGCACCTCACGCACCTAAT 60.448 57.895 0.00 0.00 0.00 1.73
562 584 2.048597 CGCACCTCACGCACCTAA 60.049 61.111 0.00 0.00 0.00 2.69
569 591 2.660553 TTTTTGCAGCGCACCTCACG 62.661 55.000 11.47 0.00 38.71 4.35
570 592 0.318955 ATTTTTGCAGCGCACCTCAC 60.319 50.000 11.47 0.00 38.71 3.51
571 593 0.039256 GATTTTTGCAGCGCACCTCA 60.039 50.000 11.47 0.00 38.71 3.86
572 594 0.039256 TGATTTTTGCAGCGCACCTC 60.039 50.000 11.47 0.00 38.71 3.85
573 595 0.388659 TTGATTTTTGCAGCGCACCT 59.611 45.000 11.47 0.00 38.71 4.00
574 596 0.508213 GTTGATTTTTGCAGCGCACC 59.492 50.000 11.47 0.00 38.71 5.01
575 597 1.453148 GAGTTGATTTTTGCAGCGCAC 59.547 47.619 11.47 0.68 38.71 5.34
576 598 1.769733 GAGTTGATTTTTGCAGCGCA 58.230 45.000 11.47 0.00 36.47 6.09
577 599 0.704551 CGAGTTGATTTTTGCAGCGC 59.295 50.000 0.00 0.00 0.00 5.92
578 600 2.036556 ACGAGTTGATTTTTGCAGCG 57.963 45.000 0.00 0.00 0.00 5.18
579 601 3.060339 CCAAACGAGTTGATTTTTGCAGC 60.060 43.478 5.36 0.00 39.87 5.25
580 602 4.207019 GTCCAAACGAGTTGATTTTTGCAG 59.793 41.667 5.36 0.00 39.87 4.41
581 603 4.109050 GTCCAAACGAGTTGATTTTTGCA 58.891 39.130 5.36 0.00 39.87 4.08
582 604 4.109050 TGTCCAAACGAGTTGATTTTTGC 58.891 39.130 5.36 0.00 39.87 3.68
583 605 6.826893 AATGTCCAAACGAGTTGATTTTTG 57.173 33.333 5.36 0.00 39.87 2.44
584 606 7.038659 TCAAATGTCCAAACGAGTTGATTTTT 58.961 30.769 5.36 0.00 39.87 1.94
585 607 6.568869 TCAAATGTCCAAACGAGTTGATTTT 58.431 32.000 5.36 0.00 39.87 1.82
586 608 6.142818 TCAAATGTCCAAACGAGTTGATTT 57.857 33.333 5.36 2.14 39.87 2.17
587 609 5.762045 CTCAAATGTCCAAACGAGTTGATT 58.238 37.500 5.36 0.00 39.87 2.57
588 610 4.320494 GCTCAAATGTCCAAACGAGTTGAT 60.320 41.667 5.36 0.00 39.87 2.57
589 611 3.003275 GCTCAAATGTCCAAACGAGTTGA 59.997 43.478 5.36 0.00 39.87 3.18
590 612 3.243035 TGCTCAAATGTCCAAACGAGTTG 60.243 43.478 0.00 0.00 36.94 3.16
591 613 2.948979 TGCTCAAATGTCCAAACGAGTT 59.051 40.909 0.00 0.00 0.00 3.01
592 614 2.571212 TGCTCAAATGTCCAAACGAGT 58.429 42.857 0.00 0.00 0.00 4.18
593 615 3.003689 ACTTGCTCAAATGTCCAAACGAG 59.996 43.478 0.00 0.00 0.00 4.18
594 616 2.948979 ACTTGCTCAAATGTCCAAACGA 59.051 40.909 0.00 0.00 0.00 3.85
595 617 3.003689 AGACTTGCTCAAATGTCCAAACG 59.996 43.478 0.00 0.00 0.00 3.60
596 618 4.202050 ACAGACTTGCTCAAATGTCCAAAC 60.202 41.667 0.00 0.00 0.00 2.93
597 619 3.953612 ACAGACTTGCTCAAATGTCCAAA 59.046 39.130 0.00 0.00 0.00 3.28
598 620 3.316029 CACAGACTTGCTCAAATGTCCAA 59.684 43.478 0.00 0.00 0.00 3.53
599 621 2.880268 CACAGACTTGCTCAAATGTCCA 59.120 45.455 0.00 0.00 0.00 4.02
600 622 2.351157 GCACAGACTTGCTCAAATGTCC 60.351 50.000 0.00 0.00 39.59 4.02
601 623 2.291465 TGCACAGACTTGCTCAAATGTC 59.709 45.455 9.86 0.00 43.41 3.06
602 624 2.300433 TGCACAGACTTGCTCAAATGT 58.700 42.857 9.86 0.00 43.41 2.71
603 625 3.358707 TTGCACAGACTTGCTCAAATG 57.641 42.857 9.86 0.00 43.41 2.32
604 626 4.389890 TTTTGCACAGACTTGCTCAAAT 57.610 36.364 9.86 0.00 43.41 2.32
605 627 3.865011 TTTTGCACAGACTTGCTCAAA 57.135 38.095 9.86 7.06 43.41 2.69
606 628 3.865011 TTTTTGCACAGACTTGCTCAA 57.135 38.095 9.86 2.78 43.41 3.02
623 645 5.736207 GCTCTTCACCCGATTTTGTCTTTTT 60.736 40.000 0.00 0.00 0.00 1.94
624 646 4.261614 GCTCTTCACCCGATTTTGTCTTTT 60.262 41.667 0.00 0.00 0.00 2.27
625 647 3.253432 GCTCTTCACCCGATTTTGTCTTT 59.747 43.478 0.00 0.00 0.00 2.52
626 648 2.814336 GCTCTTCACCCGATTTTGTCTT 59.186 45.455 0.00 0.00 0.00 3.01
627 649 2.427506 GCTCTTCACCCGATTTTGTCT 58.572 47.619 0.00 0.00 0.00 3.41
628 650 1.468914 GGCTCTTCACCCGATTTTGTC 59.531 52.381 0.00 0.00 0.00 3.18
629 651 1.534729 GGCTCTTCACCCGATTTTGT 58.465 50.000 0.00 0.00 0.00 2.83
630 652 0.811281 GGGCTCTTCACCCGATTTTG 59.189 55.000 0.00 0.00 37.67 2.44
631 653 3.266240 GGGCTCTTCACCCGATTTT 57.734 52.632 0.00 0.00 37.67 1.82
702 724 2.694628 AGATGCACCTGTTCAGCAAAAA 59.305 40.909 0.00 0.00 42.15 1.94
703 725 2.034939 CAGATGCACCTGTTCAGCAAAA 59.965 45.455 0.00 0.00 42.15 2.44
704 726 1.610038 CAGATGCACCTGTTCAGCAAA 59.390 47.619 0.00 0.00 42.15 3.68
705 727 1.202794 TCAGATGCACCTGTTCAGCAA 60.203 47.619 8.25 0.00 42.15 3.91
706 728 0.397564 TCAGATGCACCTGTTCAGCA 59.602 50.000 8.25 0.00 43.14 4.41
707 729 1.085091 CTCAGATGCACCTGTTCAGC 58.915 55.000 8.25 0.00 35.71 4.26
708 730 1.085091 GCTCAGATGCACCTGTTCAG 58.915 55.000 8.25 0.00 35.71 3.02
709 731 0.321919 GGCTCAGATGCACCTGTTCA 60.322 55.000 8.25 0.00 35.71 3.18
710 732 1.028868 GGGCTCAGATGCACCTGTTC 61.029 60.000 8.25 0.70 35.71 3.18
711 733 1.001641 GGGCTCAGATGCACCTGTT 60.002 57.895 8.25 0.00 35.71 3.16
712 734 2.673523 GGGCTCAGATGCACCTGT 59.326 61.111 8.25 0.00 35.71 4.00
713 735 2.513204 CGGGCTCAGATGCACCTG 60.513 66.667 0.00 0.00 31.60 4.00
714 736 3.790437 CCGGGCTCAGATGCACCT 61.790 66.667 0.00 0.00 31.60 4.00
715 737 4.864334 CCCGGGCTCAGATGCACC 62.864 72.222 8.08 0.00 31.60 5.01
732 754 2.565841 ACCGATAATTCAAGGCAGAGC 58.434 47.619 0.00 0.00 0.00 4.09
733 755 5.991606 TCAATACCGATAATTCAAGGCAGAG 59.008 40.000 0.00 0.00 0.00 3.35
734 756 5.924356 TCAATACCGATAATTCAAGGCAGA 58.076 37.500 0.00 0.00 0.00 4.26
735 757 6.260936 ACTTCAATACCGATAATTCAAGGCAG 59.739 38.462 0.00 0.00 0.00 4.85
736 758 6.038161 CACTTCAATACCGATAATTCAAGGCA 59.962 38.462 0.00 0.00 0.00 4.75
737 759 6.430451 CACTTCAATACCGATAATTCAAGGC 58.570 40.000 0.00 0.00 0.00 4.35
738 760 6.542370 ACCACTTCAATACCGATAATTCAAGG 59.458 38.462 0.00 0.00 0.00 3.61
739 761 7.553881 ACCACTTCAATACCGATAATTCAAG 57.446 36.000 0.00 0.00 0.00 3.02
740 762 7.931578 AACCACTTCAATACCGATAATTCAA 57.068 32.000 0.00 0.00 0.00 2.69
741 763 9.621629 AATAACCACTTCAATACCGATAATTCA 57.378 29.630 0.00 0.00 0.00 2.57
818 840 2.032808 GTGTTTGACAGTTCGAGCCTTC 60.033 50.000 0.00 0.00 0.00 3.46
819 841 1.940613 GTGTTTGACAGTTCGAGCCTT 59.059 47.619 0.00 0.00 0.00 4.35
820 842 1.139058 AGTGTTTGACAGTTCGAGCCT 59.861 47.619 0.00 0.00 0.00 4.58
821 843 1.261619 CAGTGTTTGACAGTTCGAGCC 59.738 52.381 0.00 0.00 27.13 4.70
822 844 2.201732 TCAGTGTTTGACAGTTCGAGC 58.798 47.619 0.00 0.00 27.13 5.03
1017 1040 2.517402 CCCGACGAGGAGGAGGAG 60.517 72.222 0.00 0.00 45.00 3.69
1211 1235 1.153168 AATCAGATCCCCGCGGTTG 60.153 57.895 26.12 15.28 0.00 3.77
1282 1306 1.676678 GCTACACCCAGATCCAGCGA 61.677 60.000 0.00 0.00 0.00 4.93
1394 1428 2.032377 GCGTCAAGATTCAAACGGAACA 60.032 45.455 7.34 0.00 38.60 3.18
1442 1476 4.837860 GTGATCCCTCATAAGATCCACTCT 59.162 45.833 0.00 0.00 38.50 3.24
1462 1496 6.427242 CGTATAGTTGAGATGTAGCCTAGTGA 59.573 42.308 0.00 0.00 0.00 3.41
1489 1523 9.864034 CAAAGCTAATACCAATAATCGTTACAG 57.136 33.333 0.00 0.00 0.00 2.74
1514 1548 4.889409 ACAGTCAAAGCTGGAAAGAAATCA 59.111 37.500 0.00 0.00 40.59 2.57
1563 1598 4.706842 TCCCACTAATTCTAGGATTGGC 57.293 45.455 6.51 0.00 0.00 4.52
1628 1668 1.065854 CAGTAAGGTCTTCCTGCCTGG 60.066 57.143 0.00 0.00 44.35 4.45
1634 1674 9.722184 GATTAACTAAAACAGTAAGGTCTTCCT 57.278 33.333 0.00 0.00 40.67 3.36
1736 1902 8.401490 TGCATGTGCCATGTATAATAATGTTA 57.599 30.769 14.21 0.00 41.18 2.41
1803 1969 1.802880 CGCTCCTCGGAATACAACAGG 60.803 57.143 0.00 0.00 33.78 4.00
1815 1981 0.109086 ACAGTCACATTCGCTCCTCG 60.109 55.000 0.00 0.00 40.15 4.63
1825 1991 3.939740 ATAGGGCAATCACAGTCACAT 57.060 42.857 0.00 0.00 0.00 3.21
1829 1995 6.992715 ACTAACATAATAGGGCAATCACAGTC 59.007 38.462 0.00 0.00 0.00 3.51
1928 2102 6.920569 ACTCGCACCTACCAAATTATTTAG 57.079 37.500 0.00 0.00 0.00 1.85
1942 2116 1.153823 GTGTCGCATACTCGCACCT 60.154 57.895 0.00 0.00 33.61 4.00
1944 2118 1.800315 ACGTGTCGCATACTCGCAC 60.800 57.895 9.71 0.00 46.37 5.34
2036 2212 7.630242 TCAACCTTACATCCAATTCAGATTC 57.370 36.000 0.00 0.00 0.00 2.52
2485 2675 1.895238 GTAGCTCCGCCAGTGGTAA 59.105 57.895 11.74 0.00 0.00 2.85
2540 2730 7.678171 ACATGTACAAATTTCTTATTTCCCCCT 59.322 33.333 0.00 0.00 0.00 4.79
2581 2771 4.083802 GCACTGCTACTTTGGTTAGTTCTG 60.084 45.833 0.00 0.00 0.00 3.02
2635 2825 1.599797 TGTCTGAGGCGAGTCGACA 60.600 57.895 22.73 9.82 37.34 4.35
2646 2836 3.883830 AGGCATTAGTCAGTGTCTGAG 57.116 47.619 0.00 0.00 41.46 3.35
2775 2966 5.012975 ACATTTACCAAGTGCATCCCAAAAT 59.987 36.000 0.00 0.00 0.00 1.82
2792 2983 2.989422 AGCGGCAAGAACACATTTAC 57.011 45.000 1.45 0.00 0.00 2.01
2948 3140 7.275560 ACTGCAACACAAGAAAACAGAAATTAC 59.724 33.333 0.00 0.00 0.00 1.89
2993 3185 8.483307 ACCATGCAACTGATTTATTTCATTTC 57.517 30.769 0.00 0.00 0.00 2.17
3031 3223 8.487176 CAGTATGGAAGTTACAAAAATTGCAAC 58.513 33.333 0.00 0.00 42.81 4.17
3115 3307 7.234782 TCCTTAACTACAGAGACAGAAAATGGA 59.765 37.037 0.00 0.00 0.00 3.41
3116 3308 7.386851 TCCTTAACTACAGAGACAGAAAATGG 58.613 38.462 0.00 0.00 0.00 3.16
3396 3606 8.353423 AGCTATTAACACCATTCTTTGATTGT 57.647 30.769 0.00 0.00 0.00 2.71
3731 3943 0.806102 CCGACAAGCCACTGGATACG 60.806 60.000 0.00 0.12 42.51 3.06
3780 3992 3.120060 GCAGTGTTGTTATCTCTTGGCAG 60.120 47.826 0.00 0.00 0.00 4.85
3815 4027 6.731467 AGCTTTAGATATCCTTTTTGGGTGA 58.269 36.000 0.00 0.00 36.20 4.02
3883 4095 9.883142 AGCCTAATTAGTTAGATGCATATCTTC 57.117 33.333 11.50 0.00 40.79 2.87
3912 4124 9.720769 TCTTTACATTAGGAAGTTCAAGGTAAG 57.279 33.333 5.01 5.01 32.19 2.34
3942 4154 8.877864 TCCTACAAATTGATTTAGTCCAATGT 57.122 30.769 0.00 0.00 33.70 2.71
4011 4223 0.698818 CTAGACAAGCCCCCTTTGGT 59.301 55.000 0.00 0.00 0.00 3.67
4073 4286 8.497745 AGGGAATATATGGACATATGAATGGAC 58.502 37.037 10.38 0.00 37.43 4.02
4168 4381 5.748402 TGCATGGATAGAACAGATGAAAGT 58.252 37.500 0.00 0.00 0.00 2.66
4232 4445 5.123227 AGATGACACAAAAGAAACGGAGAA 58.877 37.500 0.00 0.00 0.00 2.87
4288 4501 8.184192 GGAGTATGACATAAATCACAACAAAGG 58.816 37.037 0.00 0.00 0.00 3.11
4999 6721 6.542005 AGCATATGATTCGTTGTCCATTACAA 59.458 34.615 6.97 0.00 45.90 2.41
5012 6734 9.830294 TGCAGAAATAATAAAGCATATGATTCG 57.170 29.630 6.68 0.00 0.00 3.34
5146 6868 9.044150 CCAGCAAATTACATAAAATTGGTATGG 57.956 33.333 11.95 0.00 33.94 2.74
5148 6870 8.986991 TCCCAGCAAATTACATAAAATTGGTAT 58.013 29.630 0.00 0.00 30.75 2.73
5482 7211 2.216898 GAGTATGATGCTTGCCCTGAC 58.783 52.381 0.00 0.00 0.00 3.51
5585 7314 3.195396 TGAATGGCAAAAATAGAGCACCC 59.805 43.478 0.00 0.00 0.00 4.61
5687 7418 9.527157 TTTTATCTTTTGGAGTCATATCAACCA 57.473 29.630 0.00 0.00 0.00 3.67
6196 7928 9.994432 AGATTCATAATCTGTTTAGCTTTTTCG 57.006 29.630 0.00 0.00 46.16 3.46
6211 7943 5.619220 ACCTCTTCTGCCAGATTCATAATC 58.381 41.667 0.00 0.00 38.20 1.75
6384 8116 7.000472 TGGAAATAATAATTCTCTCCAGCCAG 59.000 38.462 0.00 0.00 0.00 4.85
6425 8157 3.381335 AGAAAGAGATAAGGGCCCGTAA 58.619 45.455 21.98 8.97 0.00 3.18
6427 8159 1.880941 AGAAAGAGATAAGGGCCCGT 58.119 50.000 18.44 17.51 0.00 5.28
6505 8238 8.737168 TTCATATCCTATGAAGTTGGAAAGTG 57.263 34.615 5.66 0.00 35.34 3.16
6531 8264 0.615850 TATTCCATGACGTGCCCACA 59.384 50.000 0.00 0.00 0.00 4.17
6640 8373 3.013219 GGGAGTTCTTCTCAAATGCCTC 58.987 50.000 0.00 0.00 44.40 4.70
6708 8441 3.448660 GGAAATTTGAGGATGGAAGGTGG 59.551 47.826 0.00 0.00 0.00 4.61
6723 8456 4.037222 AGGTGTTTTCAGTGGGGAAATTT 58.963 39.130 0.00 0.00 36.71 1.82
6747 8480 7.042950 TGCAGTAAGTTTTGTGTAGTGTAAGA 58.957 34.615 0.00 0.00 0.00 2.10
7091 8824 4.941263 CAGGAAGAAATTCCCATCGTAACA 59.059 41.667 3.42 0.00 42.06 2.41
7190 8924 2.361610 AAGGTTCAGCATGCCCCG 60.362 61.111 15.66 3.24 34.76 5.73
7254 8988 2.629051 GTACGGAGCATAGGCAAGTTT 58.371 47.619 0.67 0.00 44.61 2.66
7273 9007 7.312154 ACATATGTGTTGCAAATCAATAACGT 58.688 30.769 7.78 0.00 36.99 3.99
7425 9166 5.166398 CCTTTTTCTCTTAAATGCAGCCAG 58.834 41.667 0.00 0.00 0.00 4.85
7430 9171 7.309744 CCCACATACCTTTTTCTCTTAAATGCA 60.310 37.037 0.00 0.00 0.00 3.96
7557 9301 7.800155 TTGTTTATGGATGATCGCTTATTCA 57.200 32.000 0.00 0.00 0.00 2.57
7558 9302 8.345565 AGTTTGTTTATGGATGATCGCTTATTC 58.654 33.333 0.00 0.00 0.00 1.75
7560 9304 7.498900 TCAGTTTGTTTATGGATGATCGCTTAT 59.501 33.333 0.00 0.00 0.00 1.73
7561 9305 6.821160 TCAGTTTGTTTATGGATGATCGCTTA 59.179 34.615 0.00 0.00 0.00 3.09
7562 9306 5.647658 TCAGTTTGTTTATGGATGATCGCTT 59.352 36.000 0.00 0.00 0.00 4.68
7563 9307 5.185454 TCAGTTTGTTTATGGATGATCGCT 58.815 37.500 0.00 0.00 0.00 4.93
7564 9308 5.484173 TCAGTTTGTTTATGGATGATCGC 57.516 39.130 0.00 0.00 0.00 4.58
7565 9309 6.316140 TCCTTCAGTTTGTTTATGGATGATCG 59.684 38.462 0.00 0.00 0.00 3.69
7566 9310 7.630242 TCCTTCAGTTTGTTTATGGATGATC 57.370 36.000 0.00 0.00 0.00 2.92
7567 9311 8.599624 ATTCCTTCAGTTTGTTTATGGATGAT 57.400 30.769 0.00 0.00 0.00 2.45
7568 9312 8.421249 AATTCCTTCAGTTTGTTTATGGATGA 57.579 30.769 0.00 0.00 0.00 2.92
7572 9316 9.927668 ACAATAATTCCTTCAGTTTGTTTATGG 57.072 29.630 0.00 0.00 0.00 2.74
7574 9318 9.423061 GCACAATAATTCCTTCAGTTTGTTTAT 57.577 29.630 0.00 0.00 0.00 1.40
7575 9319 8.637986 AGCACAATAATTCCTTCAGTTTGTTTA 58.362 29.630 0.00 0.00 0.00 2.01
7576 9320 7.500141 AGCACAATAATTCCTTCAGTTTGTTT 58.500 30.769 0.00 0.00 0.00 2.83
7577 9321 7.054491 AGCACAATAATTCCTTCAGTTTGTT 57.946 32.000 0.00 0.00 0.00 2.83
7578 9322 6.655078 AGCACAATAATTCCTTCAGTTTGT 57.345 33.333 0.00 0.00 0.00 2.83
7579 9323 9.643693 AATAAGCACAATAATTCCTTCAGTTTG 57.356 29.630 0.00 0.00 0.00 2.93
7583 9327 9.956720 CCTAAATAAGCACAATAATTCCTTCAG 57.043 33.333 0.00 0.00 0.00 3.02
7584 9328 9.693739 TCCTAAATAAGCACAATAATTCCTTCA 57.306 29.630 0.00 0.00 0.00 3.02
7736 9480 4.323417 ACACAGATAACCTTTGCGAATCA 58.677 39.130 0.00 0.00 0.00 2.57
7840 9599 5.468746 GGCCACCTTTTTCCTTTCAAAATAC 59.531 40.000 0.00 0.00 0.00 1.89
7858 9617 2.645802 TGGTATGAAAATACGGCCACC 58.354 47.619 2.24 0.00 0.00 4.61
7949 9741 2.818751 TGCCGGGGAATTAACATCTT 57.181 45.000 2.18 0.00 0.00 2.40
7963 9755 3.118738 AGAGAAGGTGTAGTTATTGCCGG 60.119 47.826 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.