Multiple sequence alignment - TraesCS2D01G429300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G429300 chr2D 100.000 2299 0 0 1 2299 540967550 540965252 0.000000e+00 4246.0
1 TraesCS2D01G429300 chr2D 100.000 1931 0 0 2671 4601 540964880 540962950 0.000000e+00 3567.0
2 TraesCS2D01G429300 chr2D 98.471 785 12 0 1 785 448149181 448149965 0.000000e+00 1384.0
3 TraesCS2D01G429300 chr2D 80.089 1120 155 36 1031 2122 540955177 540954098 0.000000e+00 771.0
4 TraesCS2D01G429300 chr2D 90.379 343 26 5 3083 3421 161359813 161359474 1.170000e-120 444.0
5 TraesCS2D01G429300 chr2D 83.658 257 29 9 3407 3661 540954113 540953868 3.580000e-56 230.0
6 TraesCS2D01G429300 chr2D 85.135 74 4 4 2131 2197 161366444 161366371 8.260000e-08 69.4
7 TraesCS2D01G429300 chr2B 95.465 1323 54 3 805 2124 646660522 646659203 0.000000e+00 2106.0
8 TraesCS2D01G429300 chr2B 81.008 1111 158 34 1031 2122 646598976 646597900 0.000000e+00 833.0
9 TraesCS2D01G429300 chr2B 92.308 260 17 2 3410 3667 646659215 646658957 2.620000e-97 366.0
10 TraesCS2D01G429300 chr2B 86.224 196 20 3 3407 3601 646597915 646597726 6.030000e-49 206.0
11 TraesCS2D01G429300 chr2A 93.132 1325 58 18 807 2124 684443651 684442353 0.000000e+00 1912.0
12 TraesCS2D01G429300 chr2A 78.828 1195 161 52 964 2110 684435761 684434611 0.000000e+00 721.0
13 TraesCS2D01G429300 chr2A 93.411 258 13 2 3410 3667 684442365 684442112 3.360000e-101 379.0
14 TraesCS2D01G429300 chr2A 86.471 170 16 5 3407 3575 684429064 684428901 3.660000e-41 180.0
15 TraesCS2D01G429300 chr2A 92.683 41 1 2 2132 2170 23899659 23899699 1.790000e-04 58.4
16 TraesCS2D01G429300 chr3D 97.964 933 18 1 3670 4601 570367105 570366173 0.000000e+00 1616.0
17 TraesCS2D01G429300 chr5D 97.642 933 20 2 3670 4601 353439885 353438954 0.000000e+00 1600.0
18 TraesCS2D01G429300 chr5D 97.213 933 25 1 3670 4601 38989657 38988725 0.000000e+00 1578.0
19 TraesCS2D01G429300 chr5D 80.878 638 110 11 1 631 487876266 487876898 4.140000e-135 492.0
20 TraesCS2D01G429300 chr5D 76.537 618 128 16 1 611 60153995 60153388 5.740000e-84 322.0
21 TraesCS2D01G429300 chr1D 97.433 935 23 1 3668 4601 71640785 71641719 0.000000e+00 1592.0
22 TraesCS2D01G429300 chr1D 88.581 937 100 6 3670 4601 326785102 326784168 0.000000e+00 1131.0
23 TraesCS2D01G429300 chr1D 97.440 664 13 1 2759 3422 380543461 380542802 0.000000e+00 1129.0
24 TraesCS2D01G429300 chr1D 89.296 355 29 7 3077 3426 128598461 128598811 1.970000e-118 436.0
25 TraesCS2D01G429300 chr1D 87.887 355 34 7 3077 3426 128988732 128988382 4.280000e-110 409.0
26 TraesCS2D01G429300 chr1D 96.364 165 5 1 2131 2295 380543841 380543678 2.110000e-68 270.0
27 TraesCS2D01G429300 chr1D 96.053 76 3 0 2684 2759 380543603 380543528 1.740000e-24 124.0
28 TraesCS2D01G429300 chr7D 97.428 933 23 1 3670 4601 585612113 585611181 0.000000e+00 1589.0
29 TraesCS2D01G429300 chr7D 94.118 119 6 1 2937 3054 24847842 24847724 3.660000e-41 180.0
30 TraesCS2D01G429300 chr7D 83.969 131 8 7 2134 2251 24848545 24848415 3.760000e-21 113.0
31 TraesCS2D01G429300 chr3A 92.727 935 66 2 3668 4601 121642128 121641195 0.000000e+00 1349.0
32 TraesCS2D01G429300 chr6D 98.331 659 11 0 2759 3417 411980942 411980284 0.000000e+00 1157.0
33 TraesCS2D01G429300 chr6D 98.125 160 3 0 2131 2290 411981326 411981167 3.510000e-71 279.0
34 TraesCS2D01G429300 chr6D 97.368 76 2 0 2684 2759 411981084 411981009 3.740000e-26 130.0
35 TraesCS2D01G429300 chr7B 91.868 787 62 2 1 786 20027708 20026923 0.000000e+00 1098.0
36 TraesCS2D01G429300 chr7B 83.387 626 93 10 15 635 218860118 218860737 1.860000e-158 569.0
37 TraesCS2D01G429300 chr6A 86.710 933 118 6 3670 4599 492699963 492699034 0.000000e+00 1031.0
38 TraesCS2D01G429300 chr5B 85.363 936 130 4 3669 4599 313205495 313206428 0.000000e+00 963.0
39 TraesCS2D01G429300 chr1B 96.162 495 12 4 2796 3285 565679144 565678652 0.000000e+00 802.0
40 TraesCS2D01G429300 chr1B 88.473 347 32 6 3079 3419 647924018 647923674 3.310000e-111 412.0
41 TraesCS2D01G429300 chr1B 79.568 509 101 3 7 514 229501324 229501830 1.220000e-95 361.0
42 TraesCS2D01G429300 chr1B 96.226 159 6 0 2131 2289 565679550 565679392 1.270000e-65 261.0
43 TraesCS2D01G429300 chr1B 97.368 76 2 0 2684 2759 565679294 565679219 3.740000e-26 130.0
44 TraesCS2D01G429300 chr4D 89.676 339 27 5 3085 3417 493928922 493928586 4.250000e-115 425.0
45 TraesCS2D01G429300 chr7A 88.102 353 34 6 3076 3424 711780028 711779680 3.310000e-111 412.0
46 TraesCS2D01G429300 chr7A 92.683 41 1 2 2132 2170 697407889 697407849 1.790000e-04 58.4
47 TraesCS2D01G429300 chr4A 77.344 512 110 6 15 523 221870661 221871169 9.680000e-77 298.0
48 TraesCS2D01G429300 chr1A 92.903 155 9 2 2937 3090 281893741 281893894 1.670000e-54 224.0
49 TraesCS2D01G429300 chr1A 84.817 191 20 2 2759 2940 281893492 281893682 2.830000e-42 183.0
50 TraesCS2D01G429300 chr1A 95.714 70 3 0 2687 2756 281893369 281893438 3.760000e-21 113.0
51 TraesCS2D01G429300 chr6B 92.053 151 8 2 2937 3086 687209187 687209040 4.660000e-50 209.0
52 TraesCS2D01G429300 chr6B 100.000 30 0 0 2131 2160 309682609 309682638 6.430000e-04 56.5
53 TraesCS2D01G429300 chr3B 89.677 155 12 2 2937 3090 657600053 657599902 1.310000e-45 195.0
54 TraesCS2D01G429300 chr3B 88.732 71 3 5 2131 2198 586156280 586156348 1.060000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G429300 chr2D 540962950 540967550 4600 True 3906.500000 4246 100.000000 1 4601 2 chr2D.!!$R4 4600
1 TraesCS2D01G429300 chr2D 448149181 448149965 784 False 1384.000000 1384 98.471000 1 785 1 chr2D.!!$F1 784
2 TraesCS2D01G429300 chr2D 540953868 540955177 1309 True 500.500000 771 81.873500 1031 3661 2 chr2D.!!$R3 2630
3 TraesCS2D01G429300 chr2B 646658957 646660522 1565 True 1236.000000 2106 93.886500 805 3667 2 chr2B.!!$R2 2862
4 TraesCS2D01G429300 chr2B 646597726 646598976 1250 True 519.500000 833 83.616000 1031 3601 2 chr2B.!!$R1 2570
5 TraesCS2D01G429300 chr2A 684442112 684443651 1539 True 1145.500000 1912 93.271500 807 3667 2 chr2A.!!$R3 2860
6 TraesCS2D01G429300 chr2A 684434611 684435761 1150 True 721.000000 721 78.828000 964 2110 1 chr2A.!!$R2 1146
7 TraesCS2D01G429300 chr3D 570366173 570367105 932 True 1616.000000 1616 97.964000 3670 4601 1 chr3D.!!$R1 931
8 TraesCS2D01G429300 chr5D 353438954 353439885 931 True 1600.000000 1600 97.642000 3670 4601 1 chr5D.!!$R3 931
9 TraesCS2D01G429300 chr5D 38988725 38989657 932 True 1578.000000 1578 97.213000 3670 4601 1 chr5D.!!$R1 931
10 TraesCS2D01G429300 chr5D 487876266 487876898 632 False 492.000000 492 80.878000 1 631 1 chr5D.!!$F1 630
11 TraesCS2D01G429300 chr5D 60153388 60153995 607 True 322.000000 322 76.537000 1 611 1 chr5D.!!$R2 610
12 TraesCS2D01G429300 chr1D 71640785 71641719 934 False 1592.000000 1592 97.433000 3668 4601 1 chr1D.!!$F1 933
13 TraesCS2D01G429300 chr1D 326784168 326785102 934 True 1131.000000 1131 88.581000 3670 4601 1 chr1D.!!$R2 931
14 TraesCS2D01G429300 chr1D 380542802 380543841 1039 True 507.666667 1129 96.619000 2131 3422 3 chr1D.!!$R3 1291
15 TraesCS2D01G429300 chr7D 585611181 585612113 932 True 1589.000000 1589 97.428000 3670 4601 1 chr7D.!!$R1 931
16 TraesCS2D01G429300 chr3A 121641195 121642128 933 True 1349.000000 1349 92.727000 3668 4601 1 chr3A.!!$R1 933
17 TraesCS2D01G429300 chr6D 411980284 411981326 1042 True 522.000000 1157 97.941333 2131 3417 3 chr6D.!!$R1 1286
18 TraesCS2D01G429300 chr7B 20026923 20027708 785 True 1098.000000 1098 91.868000 1 786 1 chr7B.!!$R1 785
19 TraesCS2D01G429300 chr7B 218860118 218860737 619 False 569.000000 569 83.387000 15 635 1 chr7B.!!$F1 620
20 TraesCS2D01G429300 chr6A 492699034 492699963 929 True 1031.000000 1031 86.710000 3670 4599 1 chr6A.!!$R1 929
21 TraesCS2D01G429300 chr5B 313205495 313206428 933 False 963.000000 963 85.363000 3669 4599 1 chr5B.!!$F1 930
22 TraesCS2D01G429300 chr1B 565678652 565679550 898 True 397.666667 802 96.585333 2131 3285 3 chr1B.!!$R2 1154
23 TraesCS2D01G429300 chr1B 229501324 229501830 506 False 361.000000 361 79.568000 7 514 1 chr1B.!!$F1 507
24 TraesCS2D01G429300 chr4A 221870661 221871169 508 False 298.000000 298 77.344000 15 523 1 chr4A.!!$F1 508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
541 542 0.033504 TGCCTTGACGAACCTGACTC 59.966 55.000 0.00 0.0 0.00 3.36 F
542 543 0.033504 GCCTTGACGAACCTGACTCA 59.966 55.000 0.00 0.0 0.00 3.41 F
739 740 0.035458 GATCGGGATCGCCAGGAAAT 59.965 55.000 3.90 0.0 36.13 2.17 F
740 741 0.035458 ATCGGGATCGCCAGGAAATC 59.965 55.000 3.90 0.0 36.13 2.17 F
750 751 0.108138 CCAGGAAATCGCCTCTTCGT 60.108 55.000 0.00 0.0 35.66 3.85 F
773 774 0.252375 TTACGCTAACCCCCACCTCT 60.252 55.000 0.00 0.0 0.00 3.69 F
1671 1706 0.537143 TGCTGGTCGCCAACAGATTT 60.537 50.000 0.00 0.0 36.86 2.17 F
1676 1714 0.958822 GTCGCCAACAGATTTTGGGT 59.041 50.000 4.13 0.0 45.55 4.51 F
2268 2345 1.285023 CGACTTGGACGAACGAGGT 59.715 57.895 0.14 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1433 1459 0.743345 GATTTTCCCCTGGTCGTCGG 60.743 60.000 0.00 0.0 0.00 4.79 R
2099 2176 2.107141 ATGGCGCGGAGAAGTAGC 59.893 61.111 8.83 0.0 0.00 3.58 R
2268 2345 4.994471 CGCAGCCACAGAGCCACA 62.994 66.667 0.00 0.0 0.00 4.17 R
2766 2954 6.431852 TGAGCCCAAGTTATAAACAAAGTACC 59.568 38.462 0.00 0.0 0.00 3.34 R
2772 2960 6.727394 ACCTATGAGCCCAAGTTATAAACAA 58.273 36.000 0.00 0.0 0.00 2.83 R
2780 2968 4.223144 ACAAAAACCTATGAGCCCAAGTT 58.777 39.130 0.00 0.0 0.00 2.66 R
3151 3347 0.106708 TAATCTGCGCCTCCCATGAC 59.893 55.000 4.18 0.0 0.00 3.06 R
3417 3613 0.249238 CTGGAGAGTACTGCCGCATC 60.249 60.000 0.00 0.0 33.49 3.91 R
3751 3951 2.703007 ACTATGACTTGGCTGGGATCTC 59.297 50.000 0.00 0.0 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 1.672881 CTCATGAAATTCTGCCCCGAC 59.327 52.381 0.00 0.00 0.00 4.79
385 386 3.463944 TCTCCGAGAACAGTTTTCCAAC 58.536 45.455 0.00 0.00 0.00 3.77
386 387 2.548480 CTCCGAGAACAGTTTTCCAACC 59.452 50.000 0.00 0.00 32.70 3.77
387 388 1.263217 CCGAGAACAGTTTTCCAACCG 59.737 52.381 0.00 0.00 32.70 4.44
388 389 1.333791 CGAGAACAGTTTTCCAACCGC 60.334 52.381 0.00 0.00 32.70 5.68
389 390 1.947456 GAGAACAGTTTTCCAACCGCT 59.053 47.619 0.00 0.00 32.70 5.52
390 391 2.357952 GAGAACAGTTTTCCAACCGCTT 59.642 45.455 0.00 0.00 32.70 4.68
391 392 2.099098 AGAACAGTTTTCCAACCGCTTG 59.901 45.455 0.00 0.00 32.70 4.01
392 393 1.757682 ACAGTTTTCCAACCGCTTGA 58.242 45.000 0.00 0.00 32.70 3.02
393 394 1.676006 ACAGTTTTCCAACCGCTTGAG 59.324 47.619 0.00 0.00 32.70 3.02
394 395 1.001378 CAGTTTTCCAACCGCTTGAGG 60.001 52.381 0.00 0.00 32.70 3.86
395 396 1.133915 AGTTTTCCAACCGCTTGAGGA 60.134 47.619 0.00 0.00 32.70 3.71
396 397 1.886542 GTTTTCCAACCGCTTGAGGAT 59.113 47.619 0.00 0.00 34.73 3.24
397 398 1.821216 TTTCCAACCGCTTGAGGATC 58.179 50.000 0.00 0.00 34.73 3.36
398 399 0.035439 TTCCAACCGCTTGAGGATCC 60.035 55.000 2.48 2.48 34.73 3.36
399 400 0.909610 TCCAACCGCTTGAGGATCCT 60.910 55.000 16.13 16.13 34.73 3.24
400 401 0.462759 CCAACCGCTTGAGGATCCTC 60.463 60.000 31.59 31.59 43.01 3.71
401 402 0.462759 CAACCGCTTGAGGATCCTCC 60.463 60.000 34.05 20.19 42.09 4.30
402 403 1.961180 AACCGCTTGAGGATCCTCCG 61.961 60.000 34.05 28.61 42.75 4.63
403 404 2.419198 CGCTTGAGGATCCTCCGG 59.581 66.667 34.05 26.51 42.75 5.14
404 405 2.427245 CGCTTGAGGATCCTCCGGT 61.427 63.158 34.05 4.54 42.75 5.28
405 406 1.144936 GCTTGAGGATCCTCCGGTG 59.855 63.158 34.05 22.35 42.75 4.94
406 407 1.144936 CTTGAGGATCCTCCGGTGC 59.855 63.158 34.05 13.53 42.75 5.01
407 408 2.317149 CTTGAGGATCCTCCGGTGCC 62.317 65.000 34.05 12.82 42.75 5.01
408 409 3.551407 GAGGATCCTCCGGTGCCC 61.551 72.222 28.84 3.71 42.75 5.36
409 410 4.414956 AGGATCCTCCGGTGCCCA 62.415 66.667 9.02 0.00 42.75 5.36
410 411 4.176752 GGATCCTCCGGTGCCCAC 62.177 72.222 3.84 0.00 0.00 4.61
411 412 3.083997 GATCCTCCGGTGCCCACT 61.084 66.667 0.00 0.00 0.00 4.00
412 413 3.083997 ATCCTCCGGTGCCCACTC 61.084 66.667 0.00 0.00 0.00 3.51
421 422 4.269523 TGCCCACTCGCAAGCCTT 62.270 61.111 0.00 0.00 35.32 4.35
422 423 3.435186 GCCCACTCGCAAGCCTTC 61.435 66.667 0.00 0.00 37.18 3.46
423 424 2.747855 CCCACTCGCAAGCCTTCC 60.748 66.667 0.00 0.00 37.18 3.46
424 425 2.747855 CCACTCGCAAGCCTTCCC 60.748 66.667 0.00 0.00 37.18 3.97
425 426 2.747855 CACTCGCAAGCCTTCCCC 60.748 66.667 0.00 0.00 37.18 4.81
426 427 2.930562 ACTCGCAAGCCTTCCCCT 60.931 61.111 0.00 0.00 37.18 4.79
427 428 2.352805 CTCGCAAGCCTTCCCCTT 59.647 61.111 0.00 0.00 37.18 3.95
428 429 1.746991 CTCGCAAGCCTTCCCCTTC 60.747 63.158 0.00 0.00 37.18 3.46
429 430 2.190488 CTCGCAAGCCTTCCCCTTCT 62.190 60.000 0.00 0.00 37.18 2.85
430 431 1.746991 CGCAAGCCTTCCCCTTCTC 60.747 63.158 0.00 0.00 0.00 2.87
431 432 1.379176 GCAAGCCTTCCCCTTCTCC 60.379 63.158 0.00 0.00 0.00 3.71
432 433 1.078143 CAAGCCTTCCCCTTCTCCG 60.078 63.158 0.00 0.00 0.00 4.63
433 434 2.972819 AAGCCTTCCCCTTCTCCGC 61.973 63.158 0.00 0.00 0.00 5.54
434 435 3.403558 GCCTTCCCCTTCTCCGCT 61.404 66.667 0.00 0.00 0.00 5.52
435 436 2.972819 GCCTTCCCCTTCTCCGCTT 61.973 63.158 0.00 0.00 0.00 4.68
436 437 1.222113 CCTTCCCCTTCTCCGCTTC 59.778 63.158 0.00 0.00 0.00 3.86
437 438 1.222113 CTTCCCCTTCTCCGCTTCC 59.778 63.158 0.00 0.00 0.00 3.46
438 439 2.258748 CTTCCCCTTCTCCGCTTCCC 62.259 65.000 0.00 0.00 0.00 3.97
439 440 3.798511 CCCCTTCTCCGCTTCCCC 61.799 72.222 0.00 0.00 0.00 4.81
440 441 3.009115 CCCTTCTCCGCTTCCCCA 61.009 66.667 0.00 0.00 0.00 4.96
441 442 2.602676 CCCTTCTCCGCTTCCCCAA 61.603 63.158 0.00 0.00 0.00 4.12
442 443 1.609783 CCTTCTCCGCTTCCCCAAT 59.390 57.895 0.00 0.00 0.00 3.16
443 444 0.464554 CCTTCTCCGCTTCCCCAATC 60.465 60.000 0.00 0.00 0.00 2.67
444 445 0.543749 CTTCTCCGCTTCCCCAATCT 59.456 55.000 0.00 0.00 0.00 2.40
445 446 0.991920 TTCTCCGCTTCCCCAATCTT 59.008 50.000 0.00 0.00 0.00 2.40
446 447 0.253044 TCTCCGCTTCCCCAATCTTG 59.747 55.000 0.00 0.00 0.00 3.02
447 448 0.253044 CTCCGCTTCCCCAATCTTGA 59.747 55.000 0.00 0.00 0.00 3.02
448 449 0.253044 TCCGCTTCCCCAATCTTGAG 59.747 55.000 0.00 0.00 0.00 3.02
449 450 1.379642 CCGCTTCCCCAATCTTGAGC 61.380 60.000 0.00 0.00 0.00 4.26
450 451 1.379642 CGCTTCCCCAATCTTGAGCC 61.380 60.000 0.00 0.00 0.00 4.70
451 452 1.039785 GCTTCCCCAATCTTGAGCCC 61.040 60.000 0.00 0.00 0.00 5.19
452 453 0.396278 CTTCCCCAATCTTGAGCCCC 60.396 60.000 0.00 0.00 0.00 5.80
453 454 1.874299 TTCCCCAATCTTGAGCCCCC 61.874 60.000 0.00 0.00 0.00 5.40
454 455 2.319762 CCCCAATCTTGAGCCCCCT 61.320 63.158 0.00 0.00 0.00 4.79
455 456 1.699752 CCCAATCTTGAGCCCCCTT 59.300 57.895 0.00 0.00 0.00 3.95
456 457 0.396278 CCCAATCTTGAGCCCCCTTC 60.396 60.000 0.00 0.00 0.00 3.46
457 458 0.627986 CCAATCTTGAGCCCCCTTCT 59.372 55.000 0.00 0.00 0.00 2.85
458 459 1.409381 CCAATCTTGAGCCCCCTTCTC 60.409 57.143 0.00 0.00 0.00 2.87
459 460 1.563410 CAATCTTGAGCCCCCTTCTCT 59.437 52.381 0.00 0.00 0.00 3.10
460 461 1.506025 ATCTTGAGCCCCCTTCTCTC 58.494 55.000 0.00 0.00 0.00 3.20
461 462 0.618968 TCTTGAGCCCCCTTCTCTCC 60.619 60.000 0.00 0.00 0.00 3.71
462 463 1.965754 CTTGAGCCCCCTTCTCTCCG 61.966 65.000 0.00 0.00 0.00 4.63
463 464 3.855853 GAGCCCCCTTCTCTCCGC 61.856 72.222 0.00 0.00 0.00 5.54
468 469 4.521062 CCCTTCTCTCCGCCGCTG 62.521 72.222 0.00 0.00 0.00 5.18
469 470 3.452786 CCTTCTCTCCGCCGCTGA 61.453 66.667 0.00 0.00 0.00 4.26
470 471 2.202676 CTTCTCTCCGCCGCTGAC 60.203 66.667 0.00 0.00 0.00 3.51
471 472 2.989253 TTCTCTCCGCCGCTGACA 60.989 61.111 0.00 0.00 0.00 3.58
472 473 2.492449 CTTCTCTCCGCCGCTGACAA 62.492 60.000 0.00 0.00 0.00 3.18
473 474 1.888436 TTCTCTCCGCCGCTGACAAT 61.888 55.000 0.00 0.00 0.00 2.71
474 475 1.448540 CTCTCCGCCGCTGACAATT 60.449 57.895 0.00 0.00 0.00 2.32
475 476 1.003839 TCTCCGCCGCTGACAATTT 60.004 52.632 0.00 0.00 0.00 1.82
476 477 1.019278 TCTCCGCCGCTGACAATTTC 61.019 55.000 0.00 0.00 0.00 2.17
477 478 1.298157 CTCCGCCGCTGACAATTTCA 61.298 55.000 0.00 0.00 0.00 2.69
487 488 3.726557 TGACAATTTCAGGCCTCTCAT 57.273 42.857 0.00 0.00 0.00 2.90
488 489 3.614092 TGACAATTTCAGGCCTCTCATC 58.386 45.455 0.00 0.00 0.00 2.92
489 490 3.009363 TGACAATTTCAGGCCTCTCATCA 59.991 43.478 0.00 0.00 0.00 3.07
490 491 3.618351 ACAATTTCAGGCCTCTCATCAG 58.382 45.455 0.00 0.00 0.00 2.90
491 492 2.345124 ATTTCAGGCCTCTCATCAGC 57.655 50.000 0.00 0.00 0.00 4.26
495 496 3.329093 GGCCTCTCATCAGCCCTT 58.671 61.111 0.00 0.00 41.00 3.95
496 497 1.148048 GGCCTCTCATCAGCCCTTC 59.852 63.158 0.00 0.00 41.00 3.46
497 498 1.148048 GCCTCTCATCAGCCCTTCC 59.852 63.158 0.00 0.00 0.00 3.46
498 499 1.630126 GCCTCTCATCAGCCCTTCCA 61.630 60.000 0.00 0.00 0.00 3.53
499 500 0.179936 CCTCTCATCAGCCCTTCCAC 59.820 60.000 0.00 0.00 0.00 4.02
500 501 0.907486 CTCTCATCAGCCCTTCCACA 59.093 55.000 0.00 0.00 0.00 4.17
501 502 1.489649 CTCTCATCAGCCCTTCCACAT 59.510 52.381 0.00 0.00 0.00 3.21
502 503 1.487976 TCTCATCAGCCCTTCCACATC 59.512 52.381 0.00 0.00 0.00 3.06
503 504 0.548031 TCATCAGCCCTTCCACATCC 59.452 55.000 0.00 0.00 0.00 3.51
504 505 0.549950 CATCAGCCCTTCCACATCCT 59.450 55.000 0.00 0.00 0.00 3.24
505 506 0.842635 ATCAGCCCTTCCACATCCTC 59.157 55.000 0.00 0.00 0.00 3.71
506 507 1.225704 CAGCCCTTCCACATCCTCC 59.774 63.158 0.00 0.00 0.00 4.30
507 508 1.229951 AGCCCTTCCACATCCTCCA 60.230 57.895 0.00 0.00 0.00 3.86
508 509 0.625683 AGCCCTTCCACATCCTCCAT 60.626 55.000 0.00 0.00 0.00 3.41
509 510 0.179006 GCCCTTCCACATCCTCCATC 60.179 60.000 0.00 0.00 0.00 3.51
510 511 0.107456 CCCTTCCACATCCTCCATCG 59.893 60.000 0.00 0.00 0.00 3.84
511 512 0.533755 CCTTCCACATCCTCCATCGC 60.534 60.000 0.00 0.00 0.00 4.58
512 513 0.467384 CTTCCACATCCTCCATCGCT 59.533 55.000 0.00 0.00 0.00 4.93
513 514 0.465705 TTCCACATCCTCCATCGCTC 59.534 55.000 0.00 0.00 0.00 5.03
514 515 1.070445 CCACATCCTCCATCGCTCC 59.930 63.158 0.00 0.00 0.00 4.70
515 516 1.406065 CCACATCCTCCATCGCTCCT 61.406 60.000 0.00 0.00 0.00 3.69
516 517 0.467384 CACATCCTCCATCGCTCCTT 59.533 55.000 0.00 0.00 0.00 3.36
517 518 1.688735 CACATCCTCCATCGCTCCTTA 59.311 52.381 0.00 0.00 0.00 2.69
518 519 1.689273 ACATCCTCCATCGCTCCTTAC 59.311 52.381 0.00 0.00 0.00 2.34
519 520 1.967066 CATCCTCCATCGCTCCTTACT 59.033 52.381 0.00 0.00 0.00 2.24
520 521 1.693627 TCCTCCATCGCTCCTTACTC 58.306 55.000 0.00 0.00 0.00 2.59
521 522 0.676736 CCTCCATCGCTCCTTACTCC 59.323 60.000 0.00 0.00 0.00 3.85
522 523 1.698506 CTCCATCGCTCCTTACTCCT 58.301 55.000 0.00 0.00 0.00 3.69
523 524 1.339610 CTCCATCGCTCCTTACTCCTG 59.660 57.143 0.00 0.00 0.00 3.86
524 525 0.249657 CCATCGCTCCTTACTCCTGC 60.250 60.000 0.00 0.00 0.00 4.85
525 526 0.249657 CATCGCTCCTTACTCCTGCC 60.250 60.000 0.00 0.00 0.00 4.85
526 527 0.397816 ATCGCTCCTTACTCCTGCCT 60.398 55.000 0.00 0.00 0.00 4.75
527 528 0.614979 TCGCTCCTTACTCCTGCCTT 60.615 55.000 0.00 0.00 0.00 4.35
528 529 0.460987 CGCTCCTTACTCCTGCCTTG 60.461 60.000 0.00 0.00 0.00 3.61
529 530 0.905357 GCTCCTTACTCCTGCCTTGA 59.095 55.000 0.00 0.00 0.00 3.02
530 531 1.406205 GCTCCTTACTCCTGCCTTGAC 60.406 57.143 0.00 0.00 0.00 3.18
531 532 0.895530 TCCTTACTCCTGCCTTGACG 59.104 55.000 0.00 0.00 0.00 4.35
532 533 0.895530 CCTTACTCCTGCCTTGACGA 59.104 55.000 0.00 0.00 0.00 4.20
533 534 1.275291 CCTTACTCCTGCCTTGACGAA 59.725 52.381 0.00 0.00 0.00 3.85
534 535 2.338500 CTTACTCCTGCCTTGACGAAC 58.662 52.381 0.00 0.00 0.00 3.95
535 536 0.606604 TACTCCTGCCTTGACGAACC 59.393 55.000 0.00 0.00 0.00 3.62
536 537 1.122019 ACTCCTGCCTTGACGAACCT 61.122 55.000 0.00 0.00 0.00 3.50
537 538 0.671781 CTCCTGCCTTGACGAACCTG 60.672 60.000 0.00 0.00 0.00 4.00
538 539 1.118965 TCCTGCCTTGACGAACCTGA 61.119 55.000 0.00 0.00 0.00 3.86
539 540 0.951040 CCTGCCTTGACGAACCTGAC 60.951 60.000 0.00 0.00 0.00 3.51
540 541 0.034059 CTGCCTTGACGAACCTGACT 59.966 55.000 0.00 0.00 0.00 3.41
541 542 0.033504 TGCCTTGACGAACCTGACTC 59.966 55.000 0.00 0.00 0.00 3.36
542 543 0.033504 GCCTTGACGAACCTGACTCA 59.966 55.000 0.00 0.00 0.00 3.41
543 544 1.540363 GCCTTGACGAACCTGACTCAA 60.540 52.381 0.00 0.00 0.00 3.02
544 545 2.833794 CCTTGACGAACCTGACTCAAA 58.166 47.619 0.00 0.00 0.00 2.69
545 546 3.202906 CCTTGACGAACCTGACTCAAAA 58.797 45.455 0.00 0.00 0.00 2.44
546 547 3.002348 CCTTGACGAACCTGACTCAAAAC 59.998 47.826 0.00 0.00 0.00 2.43
547 548 2.557317 TGACGAACCTGACTCAAAACC 58.443 47.619 0.00 0.00 0.00 3.27
548 549 1.871676 GACGAACCTGACTCAAAACCC 59.128 52.381 0.00 0.00 0.00 4.11
549 550 1.489230 ACGAACCTGACTCAAAACCCT 59.511 47.619 0.00 0.00 0.00 4.34
550 551 2.701951 ACGAACCTGACTCAAAACCCTA 59.298 45.455 0.00 0.00 0.00 3.53
551 552 3.244112 ACGAACCTGACTCAAAACCCTAG 60.244 47.826 0.00 0.00 0.00 3.02
552 553 3.676093 GAACCTGACTCAAAACCCTAGG 58.324 50.000 0.06 0.06 0.00 3.02
553 554 1.985895 ACCTGACTCAAAACCCTAGGG 59.014 52.381 27.36 27.36 42.03 3.53
554 555 2.266279 CCTGACTCAAAACCCTAGGGA 58.734 52.381 35.38 10.65 38.96 4.20
555 556 2.027100 CCTGACTCAAAACCCTAGGGAC 60.027 54.545 35.38 13.74 38.96 4.46
556 557 2.907042 CTGACTCAAAACCCTAGGGACT 59.093 50.000 35.38 17.80 46.37 3.85
557 558 2.637872 TGACTCAAAACCCTAGGGACTG 59.362 50.000 35.38 24.70 41.52 3.51
558 559 2.904434 GACTCAAAACCCTAGGGACTGA 59.096 50.000 35.38 27.07 41.52 3.41
559 560 2.638363 ACTCAAAACCCTAGGGACTGAC 59.362 50.000 35.38 0.00 41.52 3.51
560 561 1.982958 TCAAAACCCTAGGGACTGACC 59.017 52.381 35.38 0.00 41.52 4.02
561 562 0.981943 AAAACCCTAGGGACTGACCG 59.018 55.000 35.38 5.24 41.52 4.79
562 563 0.178912 AAACCCTAGGGACTGACCGT 60.179 55.000 35.38 6.09 41.52 4.83
563 564 0.903454 AACCCTAGGGACTGACCGTG 60.903 60.000 35.38 3.62 41.52 4.94
564 565 2.058595 CCCTAGGGACTGACCGTGG 61.059 68.421 24.99 0.00 41.52 4.94
565 566 1.305046 CCTAGGGACTGACCGTGGT 60.305 63.158 0.00 0.00 41.52 4.16
566 567 1.605058 CCTAGGGACTGACCGTGGTG 61.605 65.000 0.00 0.00 41.52 4.17
567 568 0.898789 CTAGGGACTGACCGTGGTGT 60.899 60.000 0.00 0.00 41.52 4.16
568 569 0.405198 TAGGGACTGACCGTGGTGTA 59.595 55.000 0.00 0.00 41.52 2.90
569 570 1.183676 AGGGACTGACCGTGGTGTAC 61.184 60.000 0.00 0.00 37.18 2.90
578 579 4.883026 GTGGTGTACGACTGCGAT 57.117 55.556 0.00 0.00 41.64 4.58
579 580 2.650163 GTGGTGTACGACTGCGATC 58.350 57.895 0.00 0.00 41.64 3.69
580 581 0.801067 GTGGTGTACGACTGCGATCC 60.801 60.000 0.00 0.00 41.64 3.36
581 582 1.226888 GGTGTACGACTGCGATCCC 60.227 63.158 0.00 0.00 41.64 3.85
582 583 1.664321 GGTGTACGACTGCGATCCCT 61.664 60.000 0.00 0.00 41.64 4.20
583 584 1.019673 GTGTACGACTGCGATCCCTA 58.980 55.000 0.00 0.00 41.64 3.53
584 585 1.002684 GTGTACGACTGCGATCCCTAG 60.003 57.143 0.00 0.00 41.64 3.02
585 586 0.040246 GTACGACTGCGATCCCTAGC 60.040 60.000 0.00 0.00 41.64 3.42
586 587 0.179026 TACGACTGCGATCCCTAGCT 60.179 55.000 0.00 0.00 41.64 3.32
587 588 1.284408 CGACTGCGATCCCTAGCTC 59.716 63.158 0.00 0.00 40.82 4.09
588 589 1.284408 GACTGCGATCCCTAGCTCG 59.716 63.158 0.00 3.94 37.92 5.03
592 593 3.751342 CGATCCCTAGCTCGCAGA 58.249 61.111 0.00 0.00 0.00 4.26
593 594 2.033793 CGATCCCTAGCTCGCAGAA 58.966 57.895 0.00 0.00 34.09 3.02
594 595 0.039617 CGATCCCTAGCTCGCAGAAG 60.040 60.000 0.00 0.00 34.09 2.85
595 596 0.316841 GATCCCTAGCTCGCAGAAGG 59.683 60.000 0.00 0.00 34.09 3.46
596 597 1.753368 ATCCCTAGCTCGCAGAAGGC 61.753 60.000 0.00 0.00 34.09 4.35
597 598 2.430610 CCCTAGCTCGCAGAAGGCT 61.431 63.158 0.00 0.00 41.67 4.58
598 599 1.519719 CCTAGCTCGCAGAAGGCTT 59.480 57.895 0.00 0.00 41.67 4.35
599 600 0.747255 CCTAGCTCGCAGAAGGCTTA 59.253 55.000 0.00 0.00 41.67 3.09
600 601 1.342819 CCTAGCTCGCAGAAGGCTTAT 59.657 52.381 0.00 0.00 41.67 1.73
601 602 2.402305 CTAGCTCGCAGAAGGCTTATG 58.598 52.381 17.22 17.22 41.67 1.90
602 603 0.179062 AGCTCGCAGAAGGCTTATGG 60.179 55.000 22.11 12.76 41.67 2.74
603 604 0.462759 GCTCGCAGAAGGCTTATGGT 60.463 55.000 22.11 0.00 41.67 3.55
604 605 1.293924 CTCGCAGAAGGCTTATGGTG 58.706 55.000 22.11 10.96 41.67 4.17
605 606 0.107703 TCGCAGAAGGCTTATGGTGG 60.108 55.000 22.11 0.00 41.67 4.61
606 607 1.718757 CGCAGAAGGCTTATGGTGGC 61.719 60.000 22.11 7.81 41.67 5.01
607 608 0.394899 GCAGAAGGCTTATGGTGGCT 60.395 55.000 22.11 0.23 42.26 4.75
608 609 1.386533 CAGAAGGCTTATGGTGGCTG 58.613 55.000 13.95 4.83 40.28 4.85
609 610 0.257039 AGAAGGCTTATGGTGGCTGG 59.743 55.000 0.00 0.00 40.28 4.85
610 611 0.753111 GAAGGCTTATGGTGGCTGGG 60.753 60.000 0.00 0.00 40.28 4.45
611 612 2.123726 GGCTTATGGTGGCTGGGG 60.124 66.667 0.00 0.00 0.00 4.96
612 613 2.683475 GCTTATGGTGGCTGGGGT 59.317 61.111 0.00 0.00 0.00 4.95
613 614 1.754234 GCTTATGGTGGCTGGGGTG 60.754 63.158 0.00 0.00 0.00 4.61
614 615 1.076777 CTTATGGTGGCTGGGGTGG 60.077 63.158 0.00 0.00 0.00 4.61
615 616 1.854979 TTATGGTGGCTGGGGTGGT 60.855 57.895 0.00 0.00 0.00 4.16
616 617 1.858739 TTATGGTGGCTGGGGTGGTC 61.859 60.000 0.00 0.00 0.00 4.02
621 622 3.717294 GGCTGGGGTGGTCGTGAT 61.717 66.667 0.00 0.00 0.00 3.06
622 623 2.436646 GCTGGGGTGGTCGTGATG 60.437 66.667 0.00 0.00 0.00 3.07
623 624 2.954684 GCTGGGGTGGTCGTGATGA 61.955 63.158 0.00 0.00 0.00 2.92
624 625 1.907739 CTGGGGTGGTCGTGATGAT 59.092 57.895 0.00 0.00 0.00 2.45
625 626 0.462581 CTGGGGTGGTCGTGATGATG 60.463 60.000 0.00 0.00 0.00 3.07
626 627 1.198094 TGGGGTGGTCGTGATGATGT 61.198 55.000 0.00 0.00 0.00 3.06
627 628 0.744414 GGGGTGGTCGTGATGATGTG 60.744 60.000 0.00 0.00 0.00 3.21
628 629 0.744414 GGGTGGTCGTGATGATGTGG 60.744 60.000 0.00 0.00 0.00 4.17
629 630 0.036388 GGTGGTCGTGATGATGTGGT 60.036 55.000 0.00 0.00 0.00 4.16
630 631 1.078709 GTGGTCGTGATGATGTGGTG 58.921 55.000 0.00 0.00 0.00 4.17
631 632 0.036483 TGGTCGTGATGATGTGGTGG 60.036 55.000 0.00 0.00 0.00 4.61
632 633 1.369091 GGTCGTGATGATGTGGTGGC 61.369 60.000 0.00 0.00 0.00 5.01
633 634 1.447663 TCGTGATGATGTGGTGGCG 60.448 57.895 0.00 0.00 0.00 5.69
634 635 2.793946 GTGATGATGTGGTGGCGC 59.206 61.111 0.00 0.00 0.00 6.53
635 636 2.819154 TGATGATGTGGTGGCGCG 60.819 61.111 0.00 0.00 0.00 6.86
636 637 2.511373 GATGATGTGGTGGCGCGA 60.511 61.111 12.10 0.00 0.00 5.87
637 638 1.889105 GATGATGTGGTGGCGCGAT 60.889 57.895 12.10 0.00 0.00 4.58
638 639 1.835483 GATGATGTGGTGGCGCGATC 61.835 60.000 12.10 0.00 0.00 3.69
639 640 2.202932 GATGTGGTGGCGCGATCT 60.203 61.111 12.10 0.00 0.00 2.75
640 641 2.512286 ATGTGGTGGCGCGATCTG 60.512 61.111 12.10 0.00 0.00 2.90
650 651 4.241555 GCGATCTGCCCCGATGGT 62.242 66.667 0.00 0.00 37.76 3.55
651 652 2.280389 CGATCTGCCCCGATGGTG 60.280 66.667 0.00 0.00 36.04 4.17
652 653 2.111878 GATCTGCCCCGATGGTGG 59.888 66.667 0.00 0.00 36.04 4.61
653 654 2.366837 ATCTGCCCCGATGGTGGA 60.367 61.111 0.00 0.00 36.04 4.02
654 655 1.771746 ATCTGCCCCGATGGTGGAT 60.772 57.895 0.00 0.00 36.04 3.41
655 656 1.772819 ATCTGCCCCGATGGTGGATC 61.773 60.000 0.00 0.00 36.04 3.36
656 657 3.482232 CTGCCCCGATGGTGGATCC 62.482 68.421 4.20 4.20 36.04 3.36
657 658 3.171388 GCCCCGATGGTGGATCCT 61.171 66.667 14.23 0.00 37.07 3.24
658 659 2.757124 GCCCCGATGGTGGATCCTT 61.757 63.158 14.23 0.00 37.07 3.36
659 660 1.149174 CCCCGATGGTGGATCCTTG 59.851 63.158 14.23 0.00 37.07 3.61
660 661 1.149174 CCCGATGGTGGATCCTTGG 59.851 63.158 14.23 5.65 37.07 3.61
661 662 1.344953 CCCGATGGTGGATCCTTGGA 61.345 60.000 14.23 0.00 37.07 3.53
662 663 0.767375 CCGATGGTGGATCCTTGGAT 59.233 55.000 14.23 1.18 37.07 3.41
663 664 1.544093 CCGATGGTGGATCCTTGGATG 60.544 57.143 14.23 0.00 37.07 3.51
664 665 1.613836 GATGGTGGATCCTTGGATGC 58.386 55.000 14.23 13.25 37.07 3.91
665 666 0.928505 ATGGTGGATCCTTGGATGCA 59.071 50.000 17.87 17.87 37.07 3.96
666 667 0.703488 TGGTGGATCCTTGGATGCAA 59.297 50.000 22.22 8.17 34.77 4.08
667 668 1.341285 TGGTGGATCCTTGGATGCAAG 60.341 52.381 22.22 19.26 34.77 4.01
668 669 1.064463 GGTGGATCCTTGGATGCAAGA 60.064 52.381 26.71 13.79 34.77 3.02
669 670 2.423947 GGTGGATCCTTGGATGCAAGAT 60.424 50.000 26.71 17.47 34.77 2.40
670 671 2.883386 GTGGATCCTTGGATGCAAGATC 59.117 50.000 26.71 23.04 34.77 2.75
671 672 2.149578 GGATCCTTGGATGCAAGATCG 58.850 52.381 26.71 11.41 34.26 3.69
672 673 2.149578 GATCCTTGGATGCAAGATCGG 58.850 52.381 26.71 12.14 34.26 4.18
673 674 0.464373 TCCTTGGATGCAAGATCGGC 60.464 55.000 26.71 5.57 34.26 5.54
674 675 0.749091 CCTTGGATGCAAGATCGGCA 60.749 55.000 26.71 15.81 46.66 5.69
675 676 0.661552 CTTGGATGCAAGATCGGCAG 59.338 55.000 21.36 0.00 45.68 4.85
676 677 0.252761 TTGGATGCAAGATCGGCAGA 59.747 50.000 17.86 0.00 45.68 4.26
677 678 0.179065 TGGATGCAAGATCGGCAGAG 60.179 55.000 17.86 0.00 45.68 3.35
678 679 0.883814 GGATGCAAGATCGGCAGAGG 60.884 60.000 17.86 0.00 45.68 3.69
679 680 1.505477 GATGCAAGATCGGCAGAGGC 61.505 60.000 17.86 6.48 45.68 4.70
690 691 3.434319 CAGAGGCGGCGTTGCAAT 61.434 61.111 9.37 0.00 36.28 3.56
691 692 3.127533 AGAGGCGGCGTTGCAATC 61.128 61.111 9.37 0.00 36.28 2.67
692 693 3.127533 GAGGCGGCGTTGCAATCT 61.128 61.111 9.37 0.00 36.28 2.40
693 694 2.672996 AGGCGGCGTTGCAATCTT 60.673 55.556 9.37 0.00 36.28 2.40
694 695 2.202479 GGCGGCGTTGCAATCTTC 60.202 61.111 9.37 0.00 36.28 2.87
695 696 2.202479 GCGGCGTTGCAATCTTCC 60.202 61.111 9.37 0.74 34.15 3.46
696 697 2.690778 GCGGCGTTGCAATCTTCCT 61.691 57.895 9.37 0.00 34.15 3.36
697 698 1.366111 GCGGCGTTGCAATCTTCCTA 61.366 55.000 9.37 0.00 34.15 2.94
698 699 0.373716 CGGCGTTGCAATCTTCCTAC 59.626 55.000 0.59 0.00 0.00 3.18
699 700 0.733150 GGCGTTGCAATCTTCCTACC 59.267 55.000 0.59 0.00 0.00 3.18
700 701 0.373716 GCGTTGCAATCTTCCTACCG 59.626 55.000 0.59 0.00 0.00 4.02
701 702 2.004583 CGTTGCAATCTTCCTACCGA 57.995 50.000 0.59 0.00 0.00 4.69
702 703 1.927174 CGTTGCAATCTTCCTACCGAG 59.073 52.381 0.59 0.00 0.00 4.63
703 704 2.416836 CGTTGCAATCTTCCTACCGAGA 60.417 50.000 0.59 0.00 0.00 4.04
704 705 3.596214 GTTGCAATCTTCCTACCGAGAA 58.404 45.455 0.59 0.00 0.00 2.87
705 706 3.247006 TGCAATCTTCCTACCGAGAAC 57.753 47.619 0.00 0.00 0.00 3.01
706 707 2.565391 TGCAATCTTCCTACCGAGAACA 59.435 45.455 0.00 0.00 0.00 3.18
707 708 3.190874 GCAATCTTCCTACCGAGAACAG 58.809 50.000 0.00 0.00 0.00 3.16
708 709 3.786635 CAATCTTCCTACCGAGAACAGG 58.213 50.000 0.00 0.00 0.00 4.00
709 710 1.848652 TCTTCCTACCGAGAACAGGG 58.151 55.000 0.00 0.00 0.00 4.45
710 711 1.076677 TCTTCCTACCGAGAACAGGGT 59.923 52.381 0.00 0.00 40.35 4.34
711 712 1.900486 CTTCCTACCGAGAACAGGGTT 59.100 52.381 0.00 0.00 37.75 4.11
712 713 1.553706 TCCTACCGAGAACAGGGTTC 58.446 55.000 0.94 0.94 37.75 3.62
713 714 0.535797 CCTACCGAGAACAGGGTTCC 59.464 60.000 5.54 0.00 37.75 3.62
714 715 0.535797 CTACCGAGAACAGGGTTCCC 59.464 60.000 5.54 0.00 37.75 3.97
715 716 0.178926 TACCGAGAACAGGGTTCCCA 60.179 55.000 10.73 0.00 37.75 4.37
716 717 1.296715 CCGAGAACAGGGTTCCCAG 59.703 63.158 10.73 4.66 0.00 4.45
717 718 1.376037 CGAGAACAGGGTTCCCAGC 60.376 63.158 10.73 0.00 0.00 4.85
718 719 1.376037 GAGAACAGGGTTCCCAGCG 60.376 63.158 10.73 0.95 0.00 5.18
719 720 1.827399 GAGAACAGGGTTCCCAGCGA 61.827 60.000 10.73 0.00 0.00 4.93
720 721 1.376037 GAACAGGGTTCCCAGCGAG 60.376 63.158 10.73 0.00 0.00 5.03
721 722 1.827399 GAACAGGGTTCCCAGCGAGA 61.827 60.000 10.73 0.00 0.00 4.04
722 723 1.201429 AACAGGGTTCCCAGCGAGAT 61.201 55.000 10.73 0.00 0.00 2.75
723 724 1.144936 CAGGGTTCCCAGCGAGATC 59.855 63.158 10.73 0.00 0.00 2.75
724 725 2.107141 GGGTTCCCAGCGAGATCG 59.893 66.667 2.59 0.00 43.27 3.69
725 726 2.107141 GGTTCCCAGCGAGATCGG 59.893 66.667 4.18 0.00 40.23 4.18
726 727 2.107141 GTTCCCAGCGAGATCGGG 59.893 66.667 4.18 0.00 41.76 5.14
728 729 2.198703 TCCCAGCGAGATCGGGAT 59.801 61.111 4.18 0.00 44.28 3.85
729 730 1.903890 TCCCAGCGAGATCGGGATC 60.904 63.158 4.18 0.31 44.28 3.36
730 731 2.256764 CCAGCGAGATCGGGATCG 59.743 66.667 4.18 0.00 42.48 3.69
734 735 2.256764 CGAGATCGGGATCGCCAG 59.743 66.667 3.90 0.00 42.48 4.85
735 736 2.653702 GAGATCGGGATCGCCAGG 59.346 66.667 3.90 0.00 42.48 4.45
736 737 1.903890 GAGATCGGGATCGCCAGGA 60.904 63.158 3.90 0.00 42.48 3.86
737 738 1.457643 AGATCGGGATCGCCAGGAA 60.458 57.895 3.90 0.00 42.48 3.36
738 739 1.048724 AGATCGGGATCGCCAGGAAA 61.049 55.000 3.90 0.00 42.48 3.13
739 740 0.035458 GATCGGGATCGCCAGGAAAT 59.965 55.000 3.90 0.00 36.13 2.17
740 741 0.035458 ATCGGGATCGCCAGGAAATC 59.965 55.000 3.90 0.00 36.13 2.17
741 742 1.956170 CGGGATCGCCAGGAAATCG 60.956 63.158 3.90 0.00 35.15 3.34
742 743 2.254464 GGGATCGCCAGGAAATCGC 61.254 63.158 0.00 0.00 35.15 4.58
743 744 2.254464 GGATCGCCAGGAAATCGCC 61.254 63.158 0.00 0.00 0.00 5.54
744 745 1.227674 GATCGCCAGGAAATCGCCT 60.228 57.895 0.00 0.00 39.37 5.52
745 746 1.224722 GATCGCCAGGAAATCGCCTC 61.225 60.000 0.00 0.00 35.66 4.70
746 747 1.690219 ATCGCCAGGAAATCGCCTCT 61.690 55.000 0.00 0.00 35.66 3.69
747 748 1.450312 CGCCAGGAAATCGCCTCTT 60.450 57.895 0.00 0.00 35.66 2.85
748 749 1.432270 CGCCAGGAAATCGCCTCTTC 61.432 60.000 0.00 0.00 35.66 2.87
749 750 1.432270 GCCAGGAAATCGCCTCTTCG 61.432 60.000 0.00 0.00 35.66 3.79
750 751 0.108138 CCAGGAAATCGCCTCTTCGT 60.108 55.000 0.00 0.00 35.66 3.85
751 752 1.136305 CCAGGAAATCGCCTCTTCGTA 59.864 52.381 0.00 0.00 35.66 3.43
752 753 2.418197 CCAGGAAATCGCCTCTTCGTAA 60.418 50.000 0.00 0.00 35.66 3.18
753 754 3.259064 CAGGAAATCGCCTCTTCGTAAA 58.741 45.455 0.00 0.00 35.66 2.01
754 755 3.871594 CAGGAAATCGCCTCTTCGTAAAT 59.128 43.478 0.00 0.00 35.66 1.40
755 756 4.332819 CAGGAAATCGCCTCTTCGTAAATT 59.667 41.667 0.00 0.00 35.66 1.82
756 757 5.522460 CAGGAAATCGCCTCTTCGTAAATTA 59.478 40.000 0.00 0.00 35.66 1.40
757 758 5.522824 AGGAAATCGCCTCTTCGTAAATTAC 59.477 40.000 0.00 0.00 30.76 1.89
758 759 7.657561 AGGAAATCGCCTCTTCGTAAATTACG 61.658 42.308 18.39 18.39 43.42 3.18
768 769 2.903798 CGTAAATTACGCTAACCCCCA 58.096 47.619 12.75 0.00 45.81 4.96
769 770 2.609002 CGTAAATTACGCTAACCCCCAC 59.391 50.000 12.75 0.00 45.81 4.61
770 771 2.133281 AAATTACGCTAACCCCCACC 57.867 50.000 0.00 0.00 0.00 4.61
771 772 1.292085 AATTACGCTAACCCCCACCT 58.708 50.000 0.00 0.00 0.00 4.00
772 773 0.835276 ATTACGCTAACCCCCACCTC 59.165 55.000 0.00 0.00 0.00 3.85
773 774 0.252375 TTACGCTAACCCCCACCTCT 60.252 55.000 0.00 0.00 0.00 3.69
774 775 0.630673 TACGCTAACCCCCACCTCTA 59.369 55.000 0.00 0.00 0.00 2.43
775 776 0.686769 ACGCTAACCCCCACCTCTAG 60.687 60.000 0.00 0.00 0.00 2.43
776 777 1.400530 CGCTAACCCCCACCTCTAGG 61.401 65.000 0.00 0.00 42.17 3.02
784 785 3.155167 CACCTCTAGGGGGCGGAC 61.155 72.222 14.80 0.00 40.27 4.79
785 786 4.477119 ACCTCTAGGGGGCGGACC 62.477 72.222 14.80 0.00 40.27 4.46
796 797 4.933064 GCGGACCGGCAGAGATCG 62.933 72.222 17.22 0.00 0.00 3.69
973 987 3.716006 CACGCTGGGTCACAAGCG 61.716 66.667 19.43 19.43 45.61 4.68
1422 1448 2.047179 GACTTCCCCTGCGTGACC 60.047 66.667 0.00 0.00 0.00 4.02
1464 1490 2.619590 GGGGAAAATCAAGGCTTACCGA 60.620 50.000 0.00 0.00 42.76 4.69
1671 1706 0.537143 TGCTGGTCGCCAACAGATTT 60.537 50.000 0.00 0.00 36.86 2.17
1676 1714 0.958822 GTCGCCAACAGATTTTGGGT 59.041 50.000 4.13 0.00 45.55 4.51
1984 2049 1.319614 TGAGGATGACGATGACGCCA 61.320 55.000 0.00 0.00 43.96 5.69
1988 2053 3.740128 ATGACGATGACGCCAGGGC 62.740 63.158 0.00 0.00 43.96 5.19
2232 2309 2.889606 TTCGTTGCCTGCCTGCCTA 61.890 57.895 0.00 0.00 0.00 3.93
2268 2345 1.285023 CGACTTGGACGAACGAGGT 59.715 57.895 0.14 0.00 0.00 3.85
2691 2804 1.338136 ACTCCCCGCAATTCGATCCT 61.338 55.000 0.00 0.00 41.67 3.24
2766 2954 2.449137 TCCCCTTCTAGGTTAGTCCG 57.551 55.000 0.00 0.00 41.99 4.79
2772 2960 4.276642 CCTTCTAGGTTAGTCCGGTACTT 58.723 47.826 11.09 1.33 39.80 2.24
2780 2968 7.480760 AGGTTAGTCCGGTACTTTGTTTATA 57.519 36.000 11.09 0.00 39.80 0.98
2787 2975 5.939296 TCCGGTACTTTGTTTATAACTTGGG 59.061 40.000 0.00 0.00 0.00 4.12
2915 3103 9.811995 CCTTACAGTACTAGTATTAATGTGCAA 57.188 33.333 5.75 2.01 0.00 4.08
3130 3322 7.905493 CGAAATGTATCTTTGAAGGTTTAGCTC 59.095 37.037 0.00 0.00 0.00 4.09
3151 3347 5.695816 GCTCCTTCTGCTATTGAAGATGTAG 59.304 44.000 5.21 0.00 42.37 2.74
3152 3348 6.685116 GCTCCTTCTGCTATTGAAGATGTAGT 60.685 42.308 5.21 0.00 42.37 2.73
3153 3349 6.810911 TCCTTCTGCTATTGAAGATGTAGTC 58.189 40.000 5.21 0.00 42.37 2.59
3154 3350 6.381133 TCCTTCTGCTATTGAAGATGTAGTCA 59.619 38.462 5.21 0.00 42.37 3.41
3620 3818 0.973632 TAGATGCCGGCGATAACCAT 59.026 50.000 23.90 7.53 0.00 3.55
3751 3951 2.581354 CAAGACCTCCTCTGGCCG 59.419 66.667 0.00 0.00 0.00 6.13
3822 4024 6.480320 AGCCAAACTATCACTAGCTTTATTCG 59.520 38.462 0.00 0.00 0.00 3.34
4242 4448 6.153067 ACTTCTCTAGTGTGATCAAAAGTCG 58.847 40.000 0.00 0.00 35.19 4.18
4264 4470 4.995624 GGTATCCCTTACCTTTAGCCAT 57.004 45.455 0.00 0.00 46.07 4.40
4379 4585 4.880696 TGATGTATGATTTCATTCCGCACA 59.119 37.500 0.00 0.00 37.76 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
404 405 4.269523 AAGGCTTGCGAGTGGGCA 62.270 61.111 0.00 0.00 42.12 5.36
405 406 3.435186 GAAGGCTTGCGAGTGGGC 61.435 66.667 3.46 0.00 0.00 5.36
406 407 2.747855 GGAAGGCTTGCGAGTGGG 60.748 66.667 3.46 0.00 0.00 4.61
407 408 2.747855 GGGAAGGCTTGCGAGTGG 60.748 66.667 12.78 0.00 0.00 4.00
408 409 2.747855 GGGGAAGGCTTGCGAGTG 60.748 66.667 12.78 0.00 0.00 3.51
409 410 2.470938 GAAGGGGAAGGCTTGCGAGT 62.471 60.000 12.78 0.00 0.00 4.18
410 411 1.746991 GAAGGGGAAGGCTTGCGAG 60.747 63.158 12.78 0.00 0.00 5.03
411 412 2.185310 GAGAAGGGGAAGGCTTGCGA 62.185 60.000 12.78 0.00 0.00 5.10
412 413 1.746991 GAGAAGGGGAAGGCTTGCG 60.747 63.158 12.78 0.00 0.00 4.85
413 414 1.379176 GGAGAAGGGGAAGGCTTGC 60.379 63.158 10.64 10.64 0.00 4.01
414 415 1.078143 CGGAGAAGGGGAAGGCTTG 60.078 63.158 3.46 0.00 0.00 4.01
415 416 2.972819 GCGGAGAAGGGGAAGGCTT 61.973 63.158 0.00 0.00 0.00 4.35
416 417 3.403558 GCGGAGAAGGGGAAGGCT 61.404 66.667 0.00 0.00 0.00 4.58
417 418 2.878089 GAAGCGGAGAAGGGGAAGGC 62.878 65.000 0.00 0.00 0.00 4.35
418 419 1.222113 GAAGCGGAGAAGGGGAAGG 59.778 63.158 0.00 0.00 0.00 3.46
419 420 1.222113 GGAAGCGGAGAAGGGGAAG 59.778 63.158 0.00 0.00 0.00 3.46
420 421 2.298661 GGGAAGCGGAGAAGGGGAA 61.299 63.158 0.00 0.00 0.00 3.97
421 422 2.687566 GGGAAGCGGAGAAGGGGA 60.688 66.667 0.00 0.00 0.00 4.81
422 423 3.798511 GGGGAAGCGGAGAAGGGG 61.799 72.222 0.00 0.00 0.00 4.79
423 424 1.926426 ATTGGGGAAGCGGAGAAGGG 61.926 60.000 0.00 0.00 0.00 3.95
424 425 0.464554 GATTGGGGAAGCGGAGAAGG 60.465 60.000 0.00 0.00 0.00 3.46
425 426 0.543749 AGATTGGGGAAGCGGAGAAG 59.456 55.000 0.00 0.00 0.00 2.85
426 427 0.991920 AAGATTGGGGAAGCGGAGAA 59.008 50.000 0.00 0.00 0.00 2.87
427 428 0.253044 CAAGATTGGGGAAGCGGAGA 59.747 55.000 0.00 0.00 0.00 3.71
428 429 0.253044 TCAAGATTGGGGAAGCGGAG 59.747 55.000 0.00 0.00 0.00 4.63
429 430 0.253044 CTCAAGATTGGGGAAGCGGA 59.747 55.000 0.00 0.00 0.00 5.54
430 431 1.379642 GCTCAAGATTGGGGAAGCGG 61.380 60.000 0.00 0.00 0.00 5.52
431 432 1.379642 GGCTCAAGATTGGGGAAGCG 61.380 60.000 0.00 0.00 0.00 4.68
432 433 1.039785 GGGCTCAAGATTGGGGAAGC 61.040 60.000 0.00 0.00 0.00 3.86
433 434 0.396278 GGGGCTCAAGATTGGGGAAG 60.396 60.000 0.00 0.00 0.00 3.46
434 435 1.697297 GGGGCTCAAGATTGGGGAA 59.303 57.895 0.00 0.00 0.00 3.97
435 436 2.316586 GGGGGCTCAAGATTGGGGA 61.317 63.158 0.00 0.00 0.00 4.81
436 437 1.878799 AAGGGGGCTCAAGATTGGGG 61.879 60.000 0.00 0.00 0.00 4.96
437 438 0.396278 GAAGGGGGCTCAAGATTGGG 60.396 60.000 0.00 0.00 0.00 4.12
438 439 0.627986 AGAAGGGGGCTCAAGATTGG 59.372 55.000 0.00 0.00 0.00 3.16
439 440 1.563410 AGAGAAGGGGGCTCAAGATTG 59.437 52.381 0.00 0.00 34.85 2.67
440 441 1.843206 GAGAGAAGGGGGCTCAAGATT 59.157 52.381 0.00 0.00 34.85 2.40
441 442 1.506025 GAGAGAAGGGGGCTCAAGAT 58.494 55.000 0.00 0.00 34.85 2.40
442 443 0.618968 GGAGAGAAGGGGGCTCAAGA 60.619 60.000 0.00 0.00 34.85 3.02
443 444 1.911471 GGAGAGAAGGGGGCTCAAG 59.089 63.158 0.00 0.00 34.85 3.02
444 445 1.990060 CGGAGAGAAGGGGGCTCAA 60.990 63.158 0.00 0.00 34.85 3.02
445 446 2.364317 CGGAGAGAAGGGGGCTCA 60.364 66.667 0.00 0.00 34.85 4.26
446 447 3.855853 GCGGAGAGAAGGGGGCTC 61.856 72.222 0.00 0.00 0.00 4.70
451 452 4.521062 CAGCGGCGGAGAGAAGGG 62.521 72.222 9.78 0.00 0.00 3.95
452 453 3.452786 TCAGCGGCGGAGAGAAGG 61.453 66.667 9.78 0.00 0.00 3.46
453 454 2.202676 GTCAGCGGCGGAGAGAAG 60.203 66.667 9.78 0.00 0.00 2.85
454 455 1.888436 ATTGTCAGCGGCGGAGAGAA 61.888 55.000 9.78 4.27 0.00 2.87
455 456 1.888436 AATTGTCAGCGGCGGAGAGA 61.888 55.000 9.78 0.00 0.00 3.10
456 457 1.021390 AAATTGTCAGCGGCGGAGAG 61.021 55.000 9.78 0.00 0.00 3.20
457 458 1.003839 AAATTGTCAGCGGCGGAGA 60.004 52.632 9.78 0.00 0.00 3.71
458 459 1.298157 TGAAATTGTCAGCGGCGGAG 61.298 55.000 9.78 0.00 0.00 4.63
459 460 1.302112 TGAAATTGTCAGCGGCGGA 60.302 52.632 9.78 0.00 0.00 5.54
460 461 3.262936 TGAAATTGTCAGCGGCGG 58.737 55.556 9.78 0.00 0.00 6.13
467 468 3.009363 TGATGAGAGGCCTGAAATTGTCA 59.991 43.478 12.00 0.00 34.17 3.58
468 469 3.614092 TGATGAGAGGCCTGAAATTGTC 58.386 45.455 12.00 0.00 0.00 3.18
469 470 3.618351 CTGATGAGAGGCCTGAAATTGT 58.382 45.455 12.00 0.00 0.00 2.71
470 471 2.358267 GCTGATGAGAGGCCTGAAATTG 59.642 50.000 12.00 0.00 0.00 2.32
471 472 2.652590 GCTGATGAGAGGCCTGAAATT 58.347 47.619 12.00 0.00 0.00 1.82
472 473 1.133853 GGCTGATGAGAGGCCTGAAAT 60.134 52.381 12.00 0.00 42.31 2.17
473 474 0.254178 GGCTGATGAGAGGCCTGAAA 59.746 55.000 12.00 0.00 42.31 2.69
474 475 1.910722 GGCTGATGAGAGGCCTGAA 59.089 57.895 12.00 0.00 42.31 3.02
475 476 3.639445 GGCTGATGAGAGGCCTGA 58.361 61.111 12.00 0.00 42.31 3.86
479 480 1.148048 GGAAGGGCTGATGAGAGGC 59.852 63.158 0.00 0.00 37.80 4.70
480 481 0.179936 GTGGAAGGGCTGATGAGAGG 59.820 60.000 0.00 0.00 0.00 3.69
481 482 0.907486 TGTGGAAGGGCTGATGAGAG 59.093 55.000 0.00 0.00 0.00 3.20
482 483 1.487976 GATGTGGAAGGGCTGATGAGA 59.512 52.381 0.00 0.00 0.00 3.27
483 484 1.476471 GGATGTGGAAGGGCTGATGAG 60.476 57.143 0.00 0.00 0.00 2.90
484 485 0.548031 GGATGTGGAAGGGCTGATGA 59.452 55.000 0.00 0.00 0.00 2.92
485 486 0.549950 AGGATGTGGAAGGGCTGATG 59.450 55.000 0.00 0.00 0.00 3.07
486 487 0.842635 GAGGATGTGGAAGGGCTGAT 59.157 55.000 0.00 0.00 0.00 2.90
487 488 1.274703 GGAGGATGTGGAAGGGCTGA 61.275 60.000 0.00 0.00 0.00 4.26
488 489 1.225704 GGAGGATGTGGAAGGGCTG 59.774 63.158 0.00 0.00 0.00 4.85
489 490 0.625683 ATGGAGGATGTGGAAGGGCT 60.626 55.000 0.00 0.00 0.00 5.19
490 491 0.179006 GATGGAGGATGTGGAAGGGC 60.179 60.000 0.00 0.00 0.00 5.19
491 492 0.107456 CGATGGAGGATGTGGAAGGG 59.893 60.000 0.00 0.00 0.00 3.95
492 493 0.533755 GCGATGGAGGATGTGGAAGG 60.534 60.000 0.00 0.00 0.00 3.46
493 494 0.467384 AGCGATGGAGGATGTGGAAG 59.533 55.000 0.00 0.00 0.00 3.46
494 495 0.465705 GAGCGATGGAGGATGTGGAA 59.534 55.000 0.00 0.00 0.00 3.53
495 496 1.402896 GGAGCGATGGAGGATGTGGA 61.403 60.000 0.00 0.00 0.00 4.02
496 497 1.070445 GGAGCGATGGAGGATGTGG 59.930 63.158 0.00 0.00 0.00 4.17
497 498 0.467384 AAGGAGCGATGGAGGATGTG 59.533 55.000 0.00 0.00 0.00 3.21
498 499 1.689273 GTAAGGAGCGATGGAGGATGT 59.311 52.381 0.00 0.00 0.00 3.06
499 500 1.967066 AGTAAGGAGCGATGGAGGATG 59.033 52.381 0.00 0.00 0.00 3.51
500 501 2.243810 GAGTAAGGAGCGATGGAGGAT 58.756 52.381 0.00 0.00 0.00 3.24
501 502 1.693627 GAGTAAGGAGCGATGGAGGA 58.306 55.000 0.00 0.00 0.00 3.71
502 503 0.676736 GGAGTAAGGAGCGATGGAGG 59.323 60.000 0.00 0.00 0.00 4.30
503 504 1.339610 CAGGAGTAAGGAGCGATGGAG 59.660 57.143 0.00 0.00 0.00 3.86
504 505 1.403814 CAGGAGTAAGGAGCGATGGA 58.596 55.000 0.00 0.00 0.00 3.41
505 506 0.249657 GCAGGAGTAAGGAGCGATGG 60.250 60.000 0.00 0.00 0.00 3.51
506 507 0.249657 GGCAGGAGTAAGGAGCGATG 60.250 60.000 0.00 0.00 0.00 3.84
507 508 0.397816 AGGCAGGAGTAAGGAGCGAT 60.398 55.000 0.00 0.00 0.00 4.58
508 509 0.614979 AAGGCAGGAGTAAGGAGCGA 60.615 55.000 0.00 0.00 0.00 4.93
509 510 0.460987 CAAGGCAGGAGTAAGGAGCG 60.461 60.000 0.00 0.00 0.00 5.03
510 511 0.905357 TCAAGGCAGGAGTAAGGAGC 59.095 55.000 0.00 0.00 0.00 4.70
511 512 1.134965 CGTCAAGGCAGGAGTAAGGAG 60.135 57.143 0.00 0.00 0.00 3.69
512 513 0.895530 CGTCAAGGCAGGAGTAAGGA 59.104 55.000 0.00 0.00 0.00 3.36
513 514 0.895530 TCGTCAAGGCAGGAGTAAGG 59.104 55.000 0.00 0.00 0.00 2.69
514 515 2.338500 GTTCGTCAAGGCAGGAGTAAG 58.662 52.381 0.00 0.00 0.00 2.34
515 516 1.001633 GGTTCGTCAAGGCAGGAGTAA 59.998 52.381 0.00 0.00 0.00 2.24
516 517 0.606604 GGTTCGTCAAGGCAGGAGTA 59.393 55.000 0.00 0.00 0.00 2.59
517 518 1.122019 AGGTTCGTCAAGGCAGGAGT 61.122 55.000 0.00 0.00 0.00 3.85
518 519 0.671781 CAGGTTCGTCAAGGCAGGAG 60.672 60.000 0.00 0.00 0.00 3.69
519 520 1.118965 TCAGGTTCGTCAAGGCAGGA 61.119 55.000 0.00 0.00 0.00 3.86
520 521 0.951040 GTCAGGTTCGTCAAGGCAGG 60.951 60.000 0.00 0.00 0.00 4.85
521 522 0.034059 AGTCAGGTTCGTCAAGGCAG 59.966 55.000 0.00 0.00 0.00 4.85
522 523 0.033504 GAGTCAGGTTCGTCAAGGCA 59.966 55.000 0.00 0.00 0.00 4.75
523 524 0.033504 TGAGTCAGGTTCGTCAAGGC 59.966 55.000 0.00 0.00 0.00 4.35
524 525 2.526304 TTGAGTCAGGTTCGTCAAGG 57.474 50.000 0.00 0.00 0.00 3.61
525 526 3.002348 GGTTTTGAGTCAGGTTCGTCAAG 59.998 47.826 0.00 0.00 30.86 3.02
526 527 2.940410 GGTTTTGAGTCAGGTTCGTCAA 59.060 45.455 0.00 0.00 0.00 3.18
527 528 2.557317 GGTTTTGAGTCAGGTTCGTCA 58.443 47.619 0.00 0.00 0.00 4.35
528 529 1.871676 GGGTTTTGAGTCAGGTTCGTC 59.128 52.381 0.00 0.00 0.00 4.20
529 530 1.489230 AGGGTTTTGAGTCAGGTTCGT 59.511 47.619 0.00 0.00 0.00 3.85
530 531 2.256117 AGGGTTTTGAGTCAGGTTCG 57.744 50.000 0.00 0.00 0.00 3.95
531 532 3.559384 CCCTAGGGTTTTGAGTCAGGTTC 60.559 52.174 20.88 0.00 0.00 3.62
532 533 2.375509 CCCTAGGGTTTTGAGTCAGGTT 59.624 50.000 20.88 0.00 0.00 3.50
533 534 1.985895 CCCTAGGGTTTTGAGTCAGGT 59.014 52.381 20.88 0.00 0.00 4.00
534 535 2.027100 GTCCCTAGGGTTTTGAGTCAGG 60.027 54.545 27.58 0.00 36.47 3.86
535 536 2.907042 AGTCCCTAGGGTTTTGAGTCAG 59.093 50.000 27.58 0.00 36.47 3.51
536 537 2.637872 CAGTCCCTAGGGTTTTGAGTCA 59.362 50.000 27.58 1.33 36.47 3.41
537 538 2.904434 TCAGTCCCTAGGGTTTTGAGTC 59.096 50.000 27.58 8.81 36.47 3.36
538 539 2.638363 GTCAGTCCCTAGGGTTTTGAGT 59.362 50.000 27.58 7.86 36.47 3.41
539 540 2.027100 GGTCAGTCCCTAGGGTTTTGAG 60.027 54.545 27.58 12.43 36.47 3.02
540 541 1.982958 GGTCAGTCCCTAGGGTTTTGA 59.017 52.381 27.58 23.31 36.47 2.69
541 542 1.338769 CGGTCAGTCCCTAGGGTTTTG 60.339 57.143 27.58 21.60 36.47 2.44
542 543 0.981943 CGGTCAGTCCCTAGGGTTTT 59.018 55.000 27.58 11.37 36.47 2.43
543 544 0.178912 ACGGTCAGTCCCTAGGGTTT 60.179 55.000 27.58 13.96 36.47 3.27
544 545 0.903454 CACGGTCAGTCCCTAGGGTT 60.903 60.000 27.58 14.33 36.47 4.11
545 546 1.305046 CACGGTCAGTCCCTAGGGT 60.305 63.158 27.58 6.38 36.47 4.34
546 547 2.058595 CCACGGTCAGTCCCTAGGG 61.059 68.421 23.22 23.22 0.00 3.53
547 548 1.305046 ACCACGGTCAGTCCCTAGG 60.305 63.158 0.06 0.06 0.00 3.02
548 549 0.898789 ACACCACGGTCAGTCCCTAG 60.899 60.000 0.00 0.00 0.00 3.02
549 550 0.405198 TACACCACGGTCAGTCCCTA 59.595 55.000 0.00 0.00 0.00 3.53
550 551 1.154454 TACACCACGGTCAGTCCCT 59.846 57.895 0.00 0.00 0.00 4.20
551 552 1.291272 GTACACCACGGTCAGTCCC 59.709 63.158 0.00 0.00 0.00 4.46
552 553 4.981415 GTACACCACGGTCAGTCC 57.019 61.111 0.00 0.00 0.00 3.85
561 562 0.801067 GGATCGCAGTCGTACACCAC 60.801 60.000 0.00 0.00 36.96 4.16
562 563 1.509463 GGATCGCAGTCGTACACCA 59.491 57.895 0.00 0.00 36.96 4.17
563 564 1.226888 GGGATCGCAGTCGTACACC 60.227 63.158 4.64 0.00 36.96 4.16
564 565 1.002684 CTAGGGATCGCAGTCGTACAC 60.003 57.143 12.83 0.00 36.96 2.90
565 566 1.306148 CTAGGGATCGCAGTCGTACA 58.694 55.000 12.83 0.00 36.96 2.90
566 567 0.040246 GCTAGGGATCGCAGTCGTAC 60.040 60.000 12.83 0.00 36.96 3.67
567 568 0.179026 AGCTAGGGATCGCAGTCGTA 60.179 55.000 12.83 0.00 36.96 3.43
568 569 1.448922 GAGCTAGGGATCGCAGTCGT 61.449 60.000 12.83 0.00 36.96 4.34
569 570 1.284408 GAGCTAGGGATCGCAGTCG 59.716 63.158 12.83 0.00 0.00 4.18
570 571 1.284408 CGAGCTAGGGATCGCAGTC 59.716 63.158 12.83 2.10 44.15 3.51
571 572 3.437867 CGAGCTAGGGATCGCAGT 58.562 61.111 12.83 0.00 44.15 4.40
576 577 0.316841 CCTTCTGCGAGCTAGGGATC 59.683 60.000 0.00 0.00 0.00 3.36
577 578 1.753368 GCCTTCTGCGAGCTAGGGAT 61.753 60.000 0.24 0.00 0.00 3.85
578 579 2.427245 GCCTTCTGCGAGCTAGGGA 61.427 63.158 0.24 0.00 0.00 4.20
579 580 2.107953 GCCTTCTGCGAGCTAGGG 59.892 66.667 0.24 4.83 0.00 3.53
588 589 0.394899 AGCCACCATAAGCCTTCTGC 60.395 55.000 0.00 0.00 41.71 4.26
589 590 1.386533 CAGCCACCATAAGCCTTCTG 58.613 55.000 0.00 0.00 0.00 3.02
590 591 0.257039 CCAGCCACCATAAGCCTTCT 59.743 55.000 0.00 0.00 0.00 2.85
591 592 0.753111 CCCAGCCACCATAAGCCTTC 60.753 60.000 0.00 0.00 0.00 3.46
592 593 1.307647 CCCAGCCACCATAAGCCTT 59.692 57.895 0.00 0.00 0.00 4.35
593 594 2.693871 CCCCAGCCACCATAAGCCT 61.694 63.158 0.00 0.00 0.00 4.58
594 595 2.123726 CCCCAGCCACCATAAGCC 60.124 66.667 0.00 0.00 0.00 4.35
595 596 1.754234 CACCCCAGCCACCATAAGC 60.754 63.158 0.00 0.00 0.00 3.09
596 597 1.076777 CCACCCCAGCCACCATAAG 60.077 63.158 0.00 0.00 0.00 1.73
597 598 1.854979 ACCACCCCAGCCACCATAA 60.855 57.895 0.00 0.00 0.00 1.90
598 599 2.204228 ACCACCCCAGCCACCATA 60.204 61.111 0.00 0.00 0.00 2.74
599 600 3.661648 GACCACCCCAGCCACCAT 61.662 66.667 0.00 0.00 0.00 3.55
604 605 3.717294 ATCACGACCACCCCAGCC 61.717 66.667 0.00 0.00 0.00 4.85
605 606 2.257409 ATCATCACGACCACCCCAGC 62.257 60.000 0.00 0.00 0.00 4.85
606 607 0.462581 CATCATCACGACCACCCCAG 60.463 60.000 0.00 0.00 0.00 4.45
607 608 1.198094 ACATCATCACGACCACCCCA 61.198 55.000 0.00 0.00 0.00 4.96
608 609 0.744414 CACATCATCACGACCACCCC 60.744 60.000 0.00 0.00 0.00 4.95
609 610 0.744414 CCACATCATCACGACCACCC 60.744 60.000 0.00 0.00 0.00 4.61
610 611 0.036388 ACCACATCATCACGACCACC 60.036 55.000 0.00 0.00 0.00 4.61
611 612 1.078709 CACCACATCATCACGACCAC 58.921 55.000 0.00 0.00 0.00 4.16
612 613 0.036483 CCACCACATCATCACGACCA 60.036 55.000 0.00 0.00 0.00 4.02
613 614 1.369091 GCCACCACATCATCACGACC 61.369 60.000 0.00 0.00 0.00 4.79
614 615 1.695893 CGCCACCACATCATCACGAC 61.696 60.000 0.00 0.00 0.00 4.34
615 616 1.447663 CGCCACCACATCATCACGA 60.448 57.895 0.00 0.00 0.00 4.35
616 617 3.092403 CGCCACCACATCATCACG 58.908 61.111 0.00 0.00 0.00 4.35
617 618 2.793946 GCGCCACCACATCATCAC 59.206 61.111 0.00 0.00 0.00 3.06
618 619 2.591929 ATCGCGCCACCACATCATCA 62.592 55.000 0.00 0.00 0.00 3.07
619 620 1.835483 GATCGCGCCACCACATCATC 61.835 60.000 0.00 0.00 0.00 2.92
620 621 1.889105 GATCGCGCCACCACATCAT 60.889 57.895 0.00 0.00 0.00 2.45
621 622 2.511373 GATCGCGCCACCACATCA 60.511 61.111 0.00 0.00 0.00 3.07
622 623 2.202932 AGATCGCGCCACCACATC 60.203 61.111 0.00 0.00 0.00 3.06
623 624 2.512286 CAGATCGCGCCACCACAT 60.512 61.111 0.00 0.00 0.00 3.21
633 634 4.241555 ACCATCGGGGCAGATCGC 62.242 66.667 1.55 1.55 42.05 4.58
634 635 2.280389 CACCATCGGGGCAGATCG 60.280 66.667 0.00 0.00 42.05 3.69
635 636 1.772819 ATCCACCATCGGGGCAGATC 61.773 60.000 0.00 0.00 42.05 2.75
636 637 1.771746 ATCCACCATCGGGGCAGAT 60.772 57.895 0.00 0.00 42.05 2.90
637 638 2.366837 ATCCACCATCGGGGCAGA 60.367 61.111 0.00 0.00 42.05 4.26
638 639 2.111878 GATCCACCATCGGGGCAG 59.888 66.667 0.00 0.00 42.05 4.85
639 640 3.488569 GGATCCACCATCGGGGCA 61.489 66.667 6.95 0.00 42.05 5.36
640 641 2.757124 AAGGATCCACCATCGGGGC 61.757 63.158 15.82 0.00 42.05 5.80
641 642 1.149174 CAAGGATCCACCATCGGGG 59.851 63.158 15.82 0.00 42.04 5.73
642 643 1.149174 CCAAGGATCCACCATCGGG 59.851 63.158 15.82 0.28 42.04 5.14
643 644 0.767375 ATCCAAGGATCCACCATCGG 59.233 55.000 15.82 4.72 42.04 4.18
644 645 1.888215 CATCCAAGGATCCACCATCG 58.112 55.000 15.82 0.00 42.04 3.84
645 646 1.133699 TGCATCCAAGGATCCACCATC 60.134 52.381 15.82 0.00 42.04 3.51
646 647 0.928505 TGCATCCAAGGATCCACCAT 59.071 50.000 15.82 0.00 42.04 3.55
647 648 0.703488 TTGCATCCAAGGATCCACCA 59.297 50.000 15.82 0.00 42.04 4.17
648 649 1.064463 TCTTGCATCCAAGGATCCACC 60.064 52.381 15.82 0.00 46.69 4.61
649 650 2.425143 TCTTGCATCCAAGGATCCAC 57.575 50.000 15.82 0.00 46.69 4.02
650 651 2.486013 CGATCTTGCATCCAAGGATCCA 60.486 50.000 15.82 0.00 46.69 3.41
651 652 2.149578 CGATCTTGCATCCAAGGATCC 58.850 52.381 2.48 2.48 46.69 3.36
652 653 2.149578 CCGATCTTGCATCCAAGGATC 58.850 52.381 0.00 0.00 46.69 3.36
653 654 1.816961 GCCGATCTTGCATCCAAGGAT 60.817 52.381 0.00 0.00 46.69 3.24
654 655 0.464373 GCCGATCTTGCATCCAAGGA 60.464 55.000 0.00 0.00 46.69 3.36
655 656 0.749091 TGCCGATCTTGCATCCAAGG 60.749 55.000 0.00 0.00 46.69 3.61
657 658 0.252761 TCTGCCGATCTTGCATCCAA 59.747 50.000 7.17 0.00 38.22 3.53
658 659 0.179065 CTCTGCCGATCTTGCATCCA 60.179 55.000 7.17 0.00 38.22 3.41
659 660 0.883814 CCTCTGCCGATCTTGCATCC 60.884 60.000 7.17 0.00 38.22 3.51
660 661 1.505477 GCCTCTGCCGATCTTGCATC 61.505 60.000 7.17 0.00 38.22 3.91
661 662 1.525535 GCCTCTGCCGATCTTGCAT 60.526 57.895 7.17 0.00 38.22 3.96
662 663 2.124983 GCCTCTGCCGATCTTGCA 60.125 61.111 6.61 6.61 37.17 4.08
663 664 3.267860 CGCCTCTGCCGATCTTGC 61.268 66.667 0.00 0.00 0.00 4.01
664 665 2.587194 CCGCCTCTGCCGATCTTG 60.587 66.667 0.00 0.00 0.00 3.02
665 666 4.537433 GCCGCCTCTGCCGATCTT 62.537 66.667 0.00 0.00 0.00 2.40
673 674 3.386867 GATTGCAACGCCGCCTCTG 62.387 63.158 0.00 0.00 0.00 3.35
674 675 3.127533 GATTGCAACGCCGCCTCT 61.128 61.111 0.00 0.00 0.00 3.69
675 676 2.583685 GAAGATTGCAACGCCGCCTC 62.584 60.000 0.00 0.00 0.00 4.70
676 677 2.672996 AAGATTGCAACGCCGCCT 60.673 55.556 0.00 0.00 0.00 5.52
677 678 2.202479 GAAGATTGCAACGCCGCC 60.202 61.111 0.00 0.00 0.00 6.13
678 679 1.366111 TAGGAAGATTGCAACGCCGC 61.366 55.000 0.00 0.00 0.00 6.53
679 680 0.373716 GTAGGAAGATTGCAACGCCG 59.626 55.000 0.00 0.00 0.00 6.46
680 681 0.733150 GGTAGGAAGATTGCAACGCC 59.267 55.000 0.00 0.49 0.00 5.68
681 682 0.373716 CGGTAGGAAGATTGCAACGC 59.626 55.000 0.00 0.00 0.00 4.84
682 683 1.927174 CTCGGTAGGAAGATTGCAACG 59.073 52.381 0.00 0.00 0.00 4.10
683 684 3.247006 TCTCGGTAGGAAGATTGCAAC 57.753 47.619 0.00 0.00 0.00 4.17
684 685 3.007506 TGTTCTCGGTAGGAAGATTGCAA 59.992 43.478 0.00 0.00 0.00 4.08
685 686 2.565391 TGTTCTCGGTAGGAAGATTGCA 59.435 45.455 0.00 0.00 0.00 4.08
686 687 3.190874 CTGTTCTCGGTAGGAAGATTGC 58.809 50.000 0.00 0.00 0.00 3.56
687 688 3.430929 CCCTGTTCTCGGTAGGAAGATTG 60.431 52.174 0.00 0.00 33.33 2.67
688 689 2.766828 CCCTGTTCTCGGTAGGAAGATT 59.233 50.000 0.00 0.00 33.33 2.40
689 690 2.292323 ACCCTGTTCTCGGTAGGAAGAT 60.292 50.000 0.00 0.00 33.33 2.40
690 691 1.076677 ACCCTGTTCTCGGTAGGAAGA 59.923 52.381 0.00 0.00 33.33 2.87
691 692 1.558233 ACCCTGTTCTCGGTAGGAAG 58.442 55.000 0.00 0.00 33.33 3.46
692 693 1.897802 GAACCCTGTTCTCGGTAGGAA 59.102 52.381 0.00 0.00 33.33 3.36
693 694 1.553706 GAACCCTGTTCTCGGTAGGA 58.446 55.000 0.00 0.00 33.33 2.94
694 695 0.535797 GGAACCCTGTTCTCGGTAGG 59.464 60.000 6.89 0.00 0.00 3.18
707 708 3.447025 CCGATCTCGCTGGGAACCC 62.447 68.421 2.46 2.46 43.71 4.11
708 709 2.107141 CCGATCTCGCTGGGAACC 59.893 66.667 0.00 0.00 44.36 3.62
709 710 2.107141 CCCGATCTCGCTGGGAAC 59.893 66.667 0.00 0.00 46.41 3.62
712 713 2.653702 GATCCCGATCTCGCTGGG 59.346 66.667 0.00 0.00 44.75 4.45
713 714 2.256764 CGATCCCGATCTCGCTGG 59.743 66.667 3.35 0.00 38.22 4.85
717 718 2.256764 CTGGCGATCCCGATCTCG 59.743 66.667 3.35 0.00 38.22 4.04
718 719 1.464376 TTCCTGGCGATCCCGATCTC 61.464 60.000 3.35 0.00 38.22 2.75
719 720 1.048724 TTTCCTGGCGATCCCGATCT 61.049 55.000 3.35 0.00 38.22 2.75
720 721 0.035458 ATTTCCTGGCGATCCCGATC 59.965 55.000 0.00 0.00 38.22 3.69
721 722 0.035458 GATTTCCTGGCGATCCCGAT 59.965 55.000 0.00 0.00 38.22 4.18
722 723 1.445942 GATTTCCTGGCGATCCCGA 59.554 57.895 0.00 0.00 38.22 5.14
723 724 1.956170 CGATTTCCTGGCGATCCCG 60.956 63.158 0.00 0.00 35.87 5.14
724 725 2.254464 GCGATTTCCTGGCGATCCC 61.254 63.158 0.00 0.00 0.00 3.85
725 726 2.254464 GGCGATTTCCTGGCGATCC 61.254 63.158 0.00 0.00 0.00 3.36
726 727 1.224722 GAGGCGATTTCCTGGCGATC 61.225 60.000 0.00 0.00 36.38 3.69
727 728 1.227674 GAGGCGATTTCCTGGCGAT 60.228 57.895 0.00 0.00 36.38 4.58
728 729 1.899437 AAGAGGCGATTTCCTGGCGA 61.899 55.000 0.00 0.00 36.38 5.54
729 730 1.432270 GAAGAGGCGATTTCCTGGCG 61.432 60.000 0.00 0.00 36.38 5.69
730 731 1.432270 CGAAGAGGCGATTTCCTGGC 61.432 60.000 0.00 0.00 36.38 4.85
731 732 0.108138 ACGAAGAGGCGATTTCCTGG 60.108 55.000 0.00 0.00 36.38 4.45
732 733 2.579207 TACGAAGAGGCGATTTCCTG 57.421 50.000 0.00 0.00 36.38 3.86
733 734 3.604875 TTTACGAAGAGGCGATTTCCT 57.395 42.857 0.00 0.00 39.67 3.36
734 735 4.877323 AATTTACGAAGAGGCGATTTCC 57.123 40.909 0.00 0.00 34.83 3.13
749 750 2.945008 GGTGGGGGTTAGCGTAATTTAC 59.055 50.000 0.00 0.00 0.00 2.01
750 751 2.845586 AGGTGGGGGTTAGCGTAATTTA 59.154 45.455 0.00 0.00 0.00 1.40
751 752 1.637035 AGGTGGGGGTTAGCGTAATTT 59.363 47.619 0.00 0.00 0.00 1.82
752 753 1.211212 GAGGTGGGGGTTAGCGTAATT 59.789 52.381 0.00 0.00 0.00 1.40
753 754 0.835276 GAGGTGGGGGTTAGCGTAAT 59.165 55.000 0.00 0.00 0.00 1.89
754 755 0.252375 AGAGGTGGGGGTTAGCGTAA 60.252 55.000 0.00 0.00 0.00 3.18
755 756 0.630673 TAGAGGTGGGGGTTAGCGTA 59.369 55.000 0.00 0.00 0.00 4.42
756 757 0.686769 CTAGAGGTGGGGGTTAGCGT 60.687 60.000 0.00 0.00 0.00 5.07
757 758 1.400530 CCTAGAGGTGGGGGTTAGCG 61.401 65.000 0.00 0.00 0.00 4.26
758 759 1.054978 CCCTAGAGGTGGGGGTTAGC 61.055 65.000 0.00 0.00 41.01 3.09
759 760 3.242355 CCCTAGAGGTGGGGGTTAG 57.758 63.158 0.00 0.00 41.01 2.34
767 768 3.155167 GTCCGCCCCCTAGAGGTG 61.155 72.222 5.57 5.57 34.52 4.00
768 769 4.477119 GGTCCGCCCCCTAGAGGT 62.477 72.222 0.00 0.00 0.00 3.85
778 779 4.593864 GATCTCTGCCGGTCCGCC 62.594 72.222 5.50 0.00 0.00 6.13
779 780 4.933064 CGATCTCTGCCGGTCCGC 62.933 72.222 5.50 1.95 0.00 5.54
780 781 4.271816 CCGATCTCTGCCGGTCCG 62.272 72.222 3.60 3.60 40.78 4.79
781 782 4.593864 GCCGATCTCTGCCGGTCC 62.594 72.222 1.90 0.00 46.84 4.46
782 783 4.593864 GGCCGATCTCTGCCGGTC 62.594 72.222 1.90 0.00 46.84 4.79
787 788 4.537433 AAGGCGGCCGATCTCTGC 62.537 66.667 33.48 9.00 35.17 4.26
788 789 1.450312 AAAAGGCGGCCGATCTCTG 60.450 57.895 33.48 0.00 0.00 3.35
789 790 1.450312 CAAAAGGCGGCCGATCTCT 60.450 57.895 33.48 16.95 0.00 3.10
790 791 2.472909 CCAAAAGGCGGCCGATCTC 61.473 63.158 33.48 14.75 0.00 2.75
791 792 2.438434 CCAAAAGGCGGCCGATCT 60.438 61.111 33.48 22.52 0.00 2.75
792 793 2.340328 AACCAAAAGGCGGCCGATC 61.340 57.895 33.48 20.39 0.00 3.69
793 794 2.282887 AACCAAAAGGCGGCCGAT 60.283 55.556 33.48 14.48 0.00 4.18
794 795 3.291383 CAACCAAAAGGCGGCCGA 61.291 61.111 33.48 0.00 0.00 5.54
795 796 2.636778 AAACAACCAAAAGGCGGCCG 62.637 55.000 24.05 24.05 0.00 6.13
796 797 0.462937 AAAACAACCAAAAGGCGGCC 60.463 50.000 12.11 12.11 0.00 6.13
797 798 1.329292 GAAAAACAACCAAAAGGCGGC 59.671 47.619 0.00 0.00 0.00 6.53
798 799 2.863740 GAGAAAAACAACCAAAAGGCGG 59.136 45.455 0.00 0.00 0.00 6.13
799 800 2.863740 GGAGAAAAACAACCAAAAGGCG 59.136 45.455 0.00 0.00 0.00 5.52
800 801 3.118408 AGGGAGAAAAACAACCAAAAGGC 60.118 43.478 0.00 0.00 0.00 4.35
801 802 4.753516 AGGGAGAAAAACAACCAAAAGG 57.246 40.909 0.00 0.00 0.00 3.11
802 803 5.116180 GGAAGGGAGAAAAACAACCAAAAG 58.884 41.667 0.00 0.00 0.00 2.27
803 804 4.080807 GGGAAGGGAGAAAAACAACCAAAA 60.081 41.667 0.00 0.00 0.00 2.44
881 884 4.600012 AATCCGTTGCGAAAACAGATAG 57.400 40.909 0.00 0.00 0.00 2.08
885 888 1.969256 CGAAATCCGTTGCGAAAACAG 59.031 47.619 0.00 0.00 0.00 3.16
908 922 1.329599 GAACGACCAAATACATCGGCC 59.670 52.381 0.00 0.00 40.16 6.13
955 969 4.030452 GCTTGTGACCCAGCGTGC 62.030 66.667 0.00 0.00 0.00 5.34
956 970 3.716006 CGCTTGTGACCCAGCGTG 61.716 66.667 15.68 0.00 44.50 5.34
973 987 6.741358 GTGAATTTTTAGGTCTATCACGTTGC 59.259 38.462 0.00 0.00 0.00 4.17
1135 1149 3.080765 ATGTGGGATGTCGCCGGA 61.081 61.111 5.05 0.00 0.00 5.14
1433 1459 0.743345 GATTTTCCCCTGGTCGTCGG 60.743 60.000 0.00 0.00 0.00 4.79
1882 1932 2.821366 GCTCACCATCCACAGCCG 60.821 66.667 0.00 0.00 0.00 5.52
2099 2176 2.107141 ATGGCGCGGAGAAGTAGC 59.893 61.111 8.83 0.00 0.00 3.58
2268 2345 4.994471 CGCAGCCACAGAGCCACA 62.994 66.667 0.00 0.00 0.00 4.17
2766 2954 6.431852 TGAGCCCAAGTTATAAACAAAGTACC 59.568 38.462 0.00 0.00 0.00 3.34
2772 2960 6.727394 ACCTATGAGCCCAAGTTATAAACAA 58.273 36.000 0.00 0.00 0.00 2.83
2780 2968 4.223144 ACAAAAACCTATGAGCCCAAGTT 58.777 39.130 0.00 0.00 0.00 2.66
2840 3028 6.366604 TGTGCAACATCATTTTAAAGCATCAG 59.633 34.615 0.00 0.00 45.67 2.90
2915 3103 6.737254 TGCGCTAGCTTTAGAATTTACTTT 57.263 33.333 13.93 0.00 45.42 2.66
3130 3322 6.577103 TGACTACATCTTCAATAGCAGAAGG 58.423 40.000 0.00 0.00 42.09 3.46
3151 3347 0.106708 TAATCTGCGCCTCCCATGAC 59.893 55.000 4.18 0.00 0.00 3.06
3152 3348 0.836606 TTAATCTGCGCCTCCCATGA 59.163 50.000 4.18 0.00 0.00 3.07
3153 3349 1.808945 GATTAATCTGCGCCTCCCATG 59.191 52.381 4.18 0.00 0.00 3.66
3154 3350 1.609061 CGATTAATCTGCGCCTCCCAT 60.609 52.381 13.45 0.00 0.00 4.00
3417 3613 0.249238 CTGGAGAGTACTGCCGCATC 60.249 60.000 0.00 0.00 33.49 3.91
3751 3951 2.703007 ACTATGACTTGGCTGGGATCTC 59.297 50.000 0.00 0.00 0.00 2.75
4379 4585 5.649831 GCTCATTTTCTGGAGAAGTTGGTAT 59.350 40.000 0.00 0.00 35.21 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.