Multiple sequence alignment - TraesCS2D01G429200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G429200 chr2D 100.000 3281 0 0 1 3281 540956204 540952924 0.000000e+00 6059.0
1 TraesCS2D01G429200 chr2D 80.107 1121 153 37 1028 2107 540966520 540965429 0.000000e+00 771.0
2 TraesCS2D01G429200 chr2D 83.658 257 29 9 2092 2337 540964144 540963890 2.550000e-56 230.0
3 TraesCS2D01G429200 chr2D 86.408 206 28 0 3076 3281 540838004 540837799 3.290000e-55 226.0
4 TraesCS2D01G429200 chr2D 95.833 96 3 1 846 940 538926773 538926868 1.580000e-33 154.0
5 TraesCS2D01G429200 chr2B 92.612 1367 71 8 930 2284 646599071 646597723 0.000000e+00 1938.0
6 TraesCS2D01G429200 chr2B 80.556 1368 177 49 1028 2337 646660299 646658963 0.000000e+00 970.0
7 TraesCS2D01G429200 chr2B 86.752 468 42 9 378 830 646599572 646599110 1.360000e-138 503.0
8 TraesCS2D01G429200 chr2B 92.647 340 23 2 2943 3281 646595288 646594950 3.810000e-134 488.0
9 TraesCS2D01G429200 chr2B 92.464 345 17 3 2624 2961 646595649 646595307 4.920000e-133 484.0
10 TraesCS2D01G429200 chr2B 89.848 197 20 0 42 238 646657908 646657712 1.510000e-63 254.0
11 TraesCS2D01G429200 chr2B 86.893 206 27 0 3076 3281 646454860 646454655 7.080000e-57 231.0
12 TraesCS2D01G429200 chr2B 94.792 96 5 0 846 941 160691401 160691306 2.040000e-32 150.0
13 TraesCS2D01G429200 chr2B 93.878 98 6 0 845 942 142245671 142245574 7.340000e-32 148.0
14 TraesCS2D01G429200 chr2A 92.340 1188 60 7 935 2095 684435794 684434611 0.000000e+00 1661.0
15 TraesCS2D01G429200 chr2A 90.504 853 60 3 1424 2255 684406805 684405953 0.000000e+00 1107.0
16 TraesCS2D01G429200 chr2A 80.707 1358 185 35 1028 2337 684443446 684442118 0.000000e+00 985.0
17 TraesCS2D01G429200 chr2A 87.800 500 48 8 257 752 684441262 684440772 1.020000e-159 573.0
18 TraesCS2D01G429200 chr2A 96.165 339 13 0 2943 3281 684402517 684402179 3.700000e-154 555.0
19 TraesCS2D01G429200 chr2A 95.870 339 14 0 2943 3281 684419879 684419541 1.720000e-152 549.0
20 TraesCS2D01G429200 chr2A 82.663 646 52 21 2245 2886 684405709 684405120 4.850000e-143 518.0
21 TraesCS2D01G429200 chr2A 82.663 646 52 24 2245 2886 684428657 684428068 4.850000e-143 518.0
22 TraesCS2D01G429200 chr2A 95.431 197 9 0 2059 2255 684429097 684428901 6.830000e-82 315.0
23 TraesCS2D01G429200 chr2A 86.058 208 25 3 3076 3281 684271172 684270967 1.530000e-53 220.0
24 TraesCS2D01G429200 chr2A 88.710 124 14 0 2809 2932 684271442 684271319 5.670000e-33 152.0
25 TraesCS2D01G429200 chr5B 96.842 95 3 0 843 937 696964441 696964347 3.390000e-35 159.0
26 TraesCS2D01G429200 chr4B 96.739 92 3 0 843 934 138846452 138846361 1.580000e-33 154.0
27 TraesCS2D01G429200 chr4D 96.667 90 3 0 842 931 216743461 216743550 2.040000e-32 150.0
28 TraesCS2D01G429200 chr7B 94.737 95 4 1 845 939 627055582 627055489 2.640000e-31 147.0
29 TraesCS2D01G429200 chr7A 92.157 102 7 1 842 943 1405385 1405485 3.410000e-30 143.0
30 TraesCS2D01G429200 chr4A 91.346 104 8 1 835 938 716820867 716820969 1.230000e-29 141.0
31 TraesCS2D01G429200 chr4A 95.238 42 2 0 3007 3048 579122953 579122994 2.110000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G429200 chr2D 540952924 540956204 3280 True 6059.000000 6059 100.000000 1 3281 1 chr2D.!!$R2 3280
1 TraesCS2D01G429200 chr2D 540963890 540966520 2630 True 500.500000 771 81.882500 1028 2337 2 chr2D.!!$R3 1309
2 TraesCS2D01G429200 chr2B 646594950 646599572 4622 True 853.250000 1938 91.118750 378 3281 4 chr2B.!!$R4 2903
3 TraesCS2D01G429200 chr2B 646657712 646660299 2587 True 612.000000 970 85.202000 42 2337 2 chr2B.!!$R5 2295
4 TraesCS2D01G429200 chr2A 684434611 684435794 1183 True 1661.000000 1661 92.340000 935 2095 1 chr2A.!!$R2 1160
5 TraesCS2D01G429200 chr2A 684440772 684443446 2674 True 779.000000 985 84.253500 257 2337 2 chr2A.!!$R6 2080
6 TraesCS2D01G429200 chr2A 684402179 684406805 4626 True 726.666667 1107 89.777333 1424 3281 3 chr2A.!!$R4 1857
7 TraesCS2D01G429200 chr2A 684428068 684429097 1029 True 416.500000 518 89.047000 2059 2886 2 chr2A.!!$R5 827

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
488 490 0.026285 GACGCGTCATTGGTATGTGC 59.974 55.0 33.09 1.78 33.34 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2458 5738 0.390124 CAGGTGGTGCTGCACATTTT 59.61 50.0 31.35 13.19 35.86 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.420374 CGTTGCAAATCTATAGTTCCTTTAGA 57.580 34.615 0.00 0.00 31.01 2.10
26 27 8.543774 CGTTGCAAATCTATAGTTCCTTTAGAG 58.456 37.037 0.00 0.00 30.24 2.43
27 28 8.338986 GTTGCAAATCTATAGTTCCTTTAGAGC 58.661 37.037 0.00 0.00 30.24 4.09
28 29 6.992715 TGCAAATCTATAGTTCCTTTAGAGCC 59.007 38.462 0.00 0.00 30.24 4.70
29 30 7.147479 TGCAAATCTATAGTTCCTTTAGAGCCT 60.147 37.037 0.00 0.00 30.24 4.58
30 31 8.368668 GCAAATCTATAGTTCCTTTAGAGCCTA 58.631 37.037 0.00 0.00 30.24 3.93
31 32 9.699703 CAAATCTATAGTTCCTTTAGAGCCTAC 57.300 37.037 0.00 0.00 30.24 3.18
32 33 9.435570 AAATCTATAGTTCCTTTAGAGCCTACA 57.564 33.333 0.00 0.00 30.24 2.74
33 34 9.608718 AATCTATAGTTCCTTTAGAGCCTACAT 57.391 33.333 0.00 0.00 30.24 2.29
34 35 8.410673 TCTATAGTTCCTTTAGAGCCTACATG 57.589 38.462 0.00 0.00 0.00 3.21
35 36 8.225416 TCTATAGTTCCTTTAGAGCCTACATGA 58.775 37.037 0.00 0.00 0.00 3.07
36 37 5.346181 AGTTCCTTTAGAGCCTACATGAC 57.654 43.478 0.00 0.00 0.00 3.06
37 38 4.777896 AGTTCCTTTAGAGCCTACATGACA 59.222 41.667 0.00 0.00 0.00 3.58
38 39 4.737855 TCCTTTAGAGCCTACATGACAC 57.262 45.455 0.00 0.00 0.00 3.67
39 40 3.451178 TCCTTTAGAGCCTACATGACACC 59.549 47.826 0.00 0.00 0.00 4.16
40 41 3.452627 CCTTTAGAGCCTACATGACACCT 59.547 47.826 0.00 0.00 0.00 4.00
41 42 4.649674 CCTTTAGAGCCTACATGACACCTA 59.350 45.833 0.00 0.00 0.00 3.08
42 43 5.452077 CCTTTAGAGCCTACATGACACCTAC 60.452 48.000 0.00 0.00 0.00 3.18
43 44 3.101643 AGAGCCTACATGACACCTACA 57.898 47.619 0.00 0.00 0.00 2.74
44 45 2.761208 AGAGCCTACATGACACCTACAC 59.239 50.000 0.00 0.00 0.00 2.90
45 46 2.761208 GAGCCTACATGACACCTACACT 59.239 50.000 0.00 0.00 0.00 3.55
46 47 3.952323 GAGCCTACATGACACCTACACTA 59.048 47.826 0.00 0.00 0.00 2.74
47 48 4.350245 AGCCTACATGACACCTACACTAA 58.650 43.478 0.00 0.00 0.00 2.24
48 49 4.402793 AGCCTACATGACACCTACACTAAG 59.597 45.833 0.00 0.00 0.00 2.18
49 50 4.401519 GCCTACATGACACCTACACTAAGA 59.598 45.833 0.00 0.00 0.00 2.10
50 51 5.450688 GCCTACATGACACCTACACTAAGAG 60.451 48.000 0.00 0.00 0.00 2.85
51 52 5.652891 CCTACATGACACCTACACTAAGAGT 59.347 44.000 0.00 0.00 0.00 3.24
52 53 5.646577 ACATGACACCTACACTAAGAGTC 57.353 43.478 0.00 0.00 0.00 3.36
53 54 5.077564 ACATGACACCTACACTAAGAGTCA 58.922 41.667 0.00 0.00 36.47 3.41
54 55 5.047943 ACATGACACCTACACTAAGAGTCAC 60.048 44.000 0.00 0.00 35.57 3.67
55 56 3.825014 TGACACCTACACTAAGAGTCACC 59.175 47.826 0.00 0.00 31.08 4.02
56 57 2.818432 ACACCTACACTAAGAGTCACCG 59.182 50.000 0.00 0.00 0.00 4.94
57 58 3.079578 CACCTACACTAAGAGTCACCGA 58.920 50.000 0.00 0.00 0.00 4.69
58 59 3.504906 CACCTACACTAAGAGTCACCGAA 59.495 47.826 0.00 0.00 0.00 4.30
59 60 3.757493 ACCTACACTAAGAGTCACCGAAG 59.243 47.826 0.00 0.00 0.00 3.79
60 61 4.008330 CCTACACTAAGAGTCACCGAAGA 58.992 47.826 0.00 0.00 0.00 2.87
61 62 4.458295 CCTACACTAAGAGTCACCGAAGAA 59.542 45.833 0.00 0.00 0.00 2.52
62 63 4.240175 ACACTAAGAGTCACCGAAGAAC 57.760 45.455 0.00 0.00 0.00 3.01
63 64 3.890147 ACACTAAGAGTCACCGAAGAACT 59.110 43.478 0.00 0.00 0.00 3.01
64 65 4.341520 ACACTAAGAGTCACCGAAGAACTT 59.658 41.667 0.00 0.00 0.00 2.66
65 66 4.681942 CACTAAGAGTCACCGAAGAACTTG 59.318 45.833 0.00 0.00 0.00 3.16
66 67 2.156343 AGAGTCACCGAAGAACTTGC 57.844 50.000 0.00 0.00 0.00 4.01
67 68 1.412710 AGAGTCACCGAAGAACTTGCA 59.587 47.619 0.00 0.00 0.00 4.08
68 69 1.527311 GAGTCACCGAAGAACTTGCAC 59.473 52.381 0.00 0.00 0.00 4.57
69 70 1.134521 AGTCACCGAAGAACTTGCACA 60.135 47.619 0.00 0.00 0.00 4.57
70 71 1.261619 GTCACCGAAGAACTTGCACAG 59.738 52.381 0.00 0.00 0.00 3.66
71 72 1.134521 TCACCGAAGAACTTGCACAGT 60.135 47.619 0.00 0.00 37.30 3.55
72 73 1.261619 CACCGAAGAACTTGCACAGTC 59.738 52.381 0.00 0.00 32.94 3.51
73 74 0.868406 CCGAAGAACTTGCACAGTCC 59.132 55.000 0.00 0.00 32.94 3.85
74 75 1.541233 CCGAAGAACTTGCACAGTCCT 60.541 52.381 0.00 0.00 32.94 3.85
75 76 1.795286 CGAAGAACTTGCACAGTCCTC 59.205 52.381 0.00 0.00 32.94 3.71
76 77 2.546795 CGAAGAACTTGCACAGTCCTCT 60.547 50.000 0.00 0.00 32.94 3.69
77 78 3.305403 CGAAGAACTTGCACAGTCCTCTA 60.305 47.826 0.00 0.00 32.94 2.43
78 79 4.619394 CGAAGAACTTGCACAGTCCTCTAT 60.619 45.833 0.00 0.00 32.94 1.98
79 80 4.464069 AGAACTTGCACAGTCCTCTATC 57.536 45.455 0.00 0.00 32.94 2.08
80 81 4.093011 AGAACTTGCACAGTCCTCTATCT 58.907 43.478 0.00 0.00 32.94 1.98
81 82 4.530161 AGAACTTGCACAGTCCTCTATCTT 59.470 41.667 0.00 0.00 32.94 2.40
82 83 4.464069 ACTTGCACAGTCCTCTATCTTC 57.536 45.455 0.00 0.00 0.00 2.87
83 84 4.093011 ACTTGCACAGTCCTCTATCTTCT 58.907 43.478 0.00 0.00 0.00 2.85
84 85 4.081752 ACTTGCACAGTCCTCTATCTTCTG 60.082 45.833 0.00 0.00 0.00 3.02
85 86 3.435275 TGCACAGTCCTCTATCTTCTGT 58.565 45.455 0.00 0.00 39.48 3.41
86 87 3.834813 TGCACAGTCCTCTATCTTCTGTT 59.165 43.478 0.00 0.00 37.27 3.16
87 88 4.284490 TGCACAGTCCTCTATCTTCTGTTT 59.716 41.667 0.00 0.00 37.27 2.83
88 89 5.480422 TGCACAGTCCTCTATCTTCTGTTTA 59.520 40.000 0.00 0.00 37.27 2.01
89 90 6.039616 GCACAGTCCTCTATCTTCTGTTTAG 58.960 44.000 0.00 0.00 37.27 1.85
90 91 6.127591 GCACAGTCCTCTATCTTCTGTTTAGA 60.128 42.308 0.00 0.00 37.27 2.10
91 92 7.577807 GCACAGTCCTCTATCTTCTGTTTAGAA 60.578 40.741 0.00 0.00 40.53 2.10
92 93 7.757624 CACAGTCCTCTATCTTCTGTTTAGAAC 59.242 40.741 0.00 0.00 37.99 3.01
93 94 7.451877 ACAGTCCTCTATCTTCTGTTTAGAACA 59.548 37.037 0.00 0.00 37.99 3.18
94 95 8.474025 CAGTCCTCTATCTTCTGTTTAGAACAT 58.526 37.037 0.00 0.00 41.26 2.71
95 96 8.691797 AGTCCTCTATCTTCTGTTTAGAACATC 58.308 37.037 0.00 0.00 41.26 3.06
96 97 7.923878 GTCCTCTATCTTCTGTTTAGAACATCC 59.076 40.741 0.00 0.00 41.26 3.51
97 98 7.619698 TCCTCTATCTTCTGTTTAGAACATCCA 59.380 37.037 0.00 0.00 41.26 3.41
98 99 7.925483 CCTCTATCTTCTGTTTAGAACATCCAG 59.075 40.741 0.00 0.00 41.26 3.86
99 100 8.595362 TCTATCTTCTGTTTAGAACATCCAGA 57.405 34.615 0.00 0.00 41.26 3.86
100 101 9.035890 TCTATCTTCTGTTTAGAACATCCAGAA 57.964 33.333 0.00 0.00 41.26 3.02
101 102 7.913674 ATCTTCTGTTTAGAACATCCAGAAC 57.086 36.000 0.00 0.00 41.26 3.01
102 103 6.826668 TCTTCTGTTTAGAACATCCAGAACA 58.173 36.000 0.00 0.00 41.26 3.18
103 104 7.453393 TCTTCTGTTTAGAACATCCAGAACAT 58.547 34.615 0.00 0.00 41.26 2.71
104 105 7.604164 TCTTCTGTTTAGAACATCCAGAACATC 59.396 37.037 0.00 0.00 41.26 3.06
105 106 7.009179 TCTGTTTAGAACATCCAGAACATCT 57.991 36.000 0.00 0.00 41.26 2.90
106 107 7.453393 TCTGTTTAGAACATCCAGAACATCTT 58.547 34.615 0.00 0.00 41.26 2.40
107 108 7.388776 TCTGTTTAGAACATCCAGAACATCTTG 59.611 37.037 0.00 0.00 41.26 3.02
108 109 7.223584 TGTTTAGAACATCCAGAACATCTTGA 58.776 34.615 0.00 0.00 36.25 3.02
109 110 7.173218 TGTTTAGAACATCCAGAACATCTTGAC 59.827 37.037 0.00 0.00 36.25 3.18
110 111 4.583871 AGAACATCCAGAACATCTTGACC 58.416 43.478 0.00 0.00 0.00 4.02
111 112 4.042062 AGAACATCCAGAACATCTTGACCA 59.958 41.667 0.00 0.00 0.00 4.02
112 113 4.581309 ACATCCAGAACATCTTGACCAT 57.419 40.909 0.00 0.00 0.00 3.55
113 114 5.698741 ACATCCAGAACATCTTGACCATA 57.301 39.130 0.00 0.00 0.00 2.74
114 115 5.678583 ACATCCAGAACATCTTGACCATAG 58.321 41.667 0.00 0.00 0.00 2.23
115 116 4.142609 TCCAGAACATCTTGACCATAGC 57.857 45.455 0.00 0.00 0.00 2.97
116 117 3.776969 TCCAGAACATCTTGACCATAGCT 59.223 43.478 0.00 0.00 0.00 3.32
117 118 3.875727 CCAGAACATCTTGACCATAGCTG 59.124 47.826 0.00 0.00 0.00 4.24
118 119 4.383444 CCAGAACATCTTGACCATAGCTGA 60.383 45.833 0.00 0.00 0.00 4.26
119 120 4.569966 CAGAACATCTTGACCATAGCTGAC 59.430 45.833 0.00 0.00 0.00 3.51
120 121 4.469227 AGAACATCTTGACCATAGCTGACT 59.531 41.667 0.00 0.00 0.00 3.41
121 122 5.658634 AGAACATCTTGACCATAGCTGACTA 59.341 40.000 0.00 0.00 0.00 2.59
122 123 5.528043 ACATCTTGACCATAGCTGACTAG 57.472 43.478 0.00 0.00 0.00 2.57
123 124 5.204292 ACATCTTGACCATAGCTGACTAGA 58.796 41.667 0.00 0.00 0.00 2.43
124 125 5.837979 ACATCTTGACCATAGCTGACTAGAT 59.162 40.000 0.00 0.00 0.00 1.98
125 126 7.007116 ACATCTTGACCATAGCTGACTAGATA 58.993 38.462 0.00 0.00 0.00 1.98
126 127 7.673504 ACATCTTGACCATAGCTGACTAGATAT 59.326 37.037 0.00 0.00 35.98 1.63
127 128 8.530311 CATCTTGACCATAGCTGACTAGATATT 58.470 37.037 0.00 0.00 33.42 1.28
128 129 8.116651 TCTTGACCATAGCTGACTAGATATTC 57.883 38.462 0.00 0.00 33.42 1.75
129 130 7.947332 TCTTGACCATAGCTGACTAGATATTCT 59.053 37.037 0.00 0.00 33.42 2.40
130 131 7.459795 TGACCATAGCTGACTAGATATTCTG 57.540 40.000 0.00 0.00 33.42 3.02
131 132 7.234355 TGACCATAGCTGACTAGATATTCTGA 58.766 38.462 0.00 0.00 33.42 3.27
132 133 7.725844 TGACCATAGCTGACTAGATATTCTGAA 59.274 37.037 0.00 0.00 33.42 3.02
133 134 7.891561 ACCATAGCTGACTAGATATTCTGAAC 58.108 38.462 0.00 0.00 33.42 3.18
134 135 7.507277 ACCATAGCTGACTAGATATTCTGAACA 59.493 37.037 0.00 0.00 33.42 3.18
135 136 8.363390 CCATAGCTGACTAGATATTCTGAACAA 58.637 37.037 0.00 0.00 33.42 2.83
136 137 9.755804 CATAGCTGACTAGATATTCTGAACAAA 57.244 33.333 0.00 0.00 33.42 2.83
138 139 8.485976 AGCTGACTAGATATTCTGAACAAAAC 57.514 34.615 0.00 0.00 0.00 2.43
139 140 8.097038 AGCTGACTAGATATTCTGAACAAAACA 58.903 33.333 0.00 0.00 0.00 2.83
140 141 8.386606 GCTGACTAGATATTCTGAACAAAACAG 58.613 37.037 0.00 0.00 36.80 3.16
141 142 9.429359 CTGACTAGATATTCTGAACAAAACAGT 57.571 33.333 0.00 0.00 36.81 3.55
146 147 8.553459 AGATATTCTGAACAAAACAGTAGTGG 57.447 34.615 1.92 0.00 36.81 4.00
147 148 8.157476 AGATATTCTGAACAAAACAGTAGTGGT 58.843 33.333 1.92 0.00 36.81 4.16
148 149 6.619801 ATTCTGAACAAAACAGTAGTGGTC 57.380 37.500 1.92 0.00 36.81 4.02
149 150 4.116961 TCTGAACAAAACAGTAGTGGTCG 58.883 43.478 1.92 0.00 36.81 4.79
150 151 2.610374 TGAACAAAACAGTAGTGGTCGC 59.390 45.455 1.92 0.00 31.33 5.19
151 152 1.214367 ACAAAACAGTAGTGGTCGCG 58.786 50.000 0.00 0.00 0.00 5.87
152 153 0.110823 CAAAACAGTAGTGGTCGCGC 60.111 55.000 0.00 0.00 0.00 6.86
153 154 0.249741 AAAACAGTAGTGGTCGCGCT 60.250 50.000 5.56 0.00 0.00 5.92
154 155 0.666577 AAACAGTAGTGGTCGCGCTC 60.667 55.000 5.56 0.00 0.00 5.03
155 156 2.577112 CAGTAGTGGTCGCGCTCG 60.577 66.667 5.56 0.00 0.00 5.03
156 157 3.054503 AGTAGTGGTCGCGCTCGT 61.055 61.111 5.56 0.00 36.96 4.18
157 158 1.742880 AGTAGTGGTCGCGCTCGTA 60.743 57.895 5.56 0.00 36.96 3.43
158 159 1.582168 GTAGTGGTCGCGCTCGTAC 60.582 63.158 5.56 0.00 36.96 3.67
159 160 2.753966 TAGTGGTCGCGCTCGTACC 61.754 63.158 5.56 3.62 36.84 3.34
167 168 4.710695 CGCTCGTACCGTGCACCA 62.711 66.667 12.15 0.00 44.82 4.17
168 169 2.125673 GCTCGTACCGTGCACCAT 60.126 61.111 12.15 1.51 44.15 3.55
169 170 2.165301 GCTCGTACCGTGCACCATC 61.165 63.158 12.15 0.00 44.15 3.51
170 171 1.511305 CTCGTACCGTGCACCATCT 59.489 57.895 12.15 0.00 0.00 2.90
171 172 0.108804 CTCGTACCGTGCACCATCTT 60.109 55.000 12.15 0.00 0.00 2.40
172 173 0.108992 TCGTACCGTGCACCATCTTC 60.109 55.000 12.15 0.00 0.00 2.87
173 174 0.108804 CGTACCGTGCACCATCTTCT 60.109 55.000 12.15 0.00 0.00 2.85
174 175 1.641577 GTACCGTGCACCATCTTCTC 58.358 55.000 12.15 0.00 0.00 2.87
175 176 1.204941 GTACCGTGCACCATCTTCTCT 59.795 52.381 12.15 0.00 0.00 3.10
176 177 0.687354 ACCGTGCACCATCTTCTCTT 59.313 50.000 12.15 0.00 0.00 2.85
177 178 1.338200 ACCGTGCACCATCTTCTCTTC 60.338 52.381 12.15 0.00 0.00 2.87
178 179 1.066573 CCGTGCACCATCTTCTCTTCT 60.067 52.381 12.15 0.00 0.00 2.85
179 180 2.166459 CCGTGCACCATCTTCTCTTCTA 59.834 50.000 12.15 0.00 0.00 2.10
180 181 3.443037 CGTGCACCATCTTCTCTTCTAG 58.557 50.000 12.15 0.00 0.00 2.43
181 182 3.129462 CGTGCACCATCTTCTCTTCTAGA 59.871 47.826 12.15 0.00 0.00 2.43
182 183 4.380973 CGTGCACCATCTTCTCTTCTAGAA 60.381 45.833 12.15 4.81 42.07 2.10
183 184 5.482908 GTGCACCATCTTCTCTTCTAGAAA 58.517 41.667 5.22 0.00 43.66 2.52
184 185 5.580297 GTGCACCATCTTCTCTTCTAGAAAG 59.420 44.000 5.22 7.36 43.66 2.62
185 186 5.247110 TGCACCATCTTCTCTTCTAGAAAGT 59.753 40.000 6.63 0.00 43.66 2.66
186 187 6.169800 GCACCATCTTCTCTTCTAGAAAGTT 58.830 40.000 6.63 0.00 43.66 2.66
187 188 6.091986 GCACCATCTTCTCTTCTAGAAAGTTG 59.908 42.308 6.63 6.36 43.66 3.16
188 189 6.091986 CACCATCTTCTCTTCTAGAAAGTTGC 59.908 42.308 6.63 0.00 43.66 4.17
189 190 6.169094 CCATCTTCTCTTCTAGAAAGTTGCA 58.831 40.000 6.63 0.00 43.66 4.08
190 191 6.091986 CCATCTTCTCTTCTAGAAAGTTGCAC 59.908 42.308 6.63 0.00 43.66 4.57
191 192 5.223382 TCTTCTCTTCTAGAAAGTTGCACG 58.777 41.667 6.63 0.00 43.66 5.34
192 193 3.318017 TCTCTTCTAGAAAGTTGCACGC 58.682 45.455 6.63 0.00 0.00 5.34
193 194 3.059884 CTCTTCTAGAAAGTTGCACGCA 58.940 45.455 6.63 0.00 0.00 5.24
194 195 3.462982 TCTTCTAGAAAGTTGCACGCAA 58.537 40.909 6.63 0.00 0.00 4.85
195 196 8.147032 TTCTCTTCTAGAAAGTTGCACGCAAC 62.147 42.308 23.95 23.95 45.57 4.17
202 203 3.609703 TTGCACGCAACCCAACTT 58.390 50.000 0.00 0.00 0.00 2.66
203 204 1.435515 TTGCACGCAACCCAACTTC 59.564 52.632 0.00 0.00 0.00 3.01
204 205 2.010582 TTGCACGCAACCCAACTTCC 62.011 55.000 0.00 0.00 0.00 3.46
205 206 2.193536 GCACGCAACCCAACTTCCT 61.194 57.895 0.00 0.00 0.00 3.36
206 207 1.949257 CACGCAACCCAACTTCCTC 59.051 57.895 0.00 0.00 0.00 3.71
207 208 0.535102 CACGCAACCCAACTTCCTCT 60.535 55.000 0.00 0.00 0.00 3.69
208 209 0.250338 ACGCAACCCAACTTCCTCTC 60.250 55.000 0.00 0.00 0.00 3.20
209 210 0.250295 CGCAACCCAACTTCCTCTCA 60.250 55.000 0.00 0.00 0.00 3.27
210 211 1.239347 GCAACCCAACTTCCTCTCAC 58.761 55.000 0.00 0.00 0.00 3.51
211 212 1.476833 GCAACCCAACTTCCTCTCACA 60.477 52.381 0.00 0.00 0.00 3.58
212 213 2.815589 GCAACCCAACTTCCTCTCACAT 60.816 50.000 0.00 0.00 0.00 3.21
213 214 3.077359 CAACCCAACTTCCTCTCACATC 58.923 50.000 0.00 0.00 0.00 3.06
214 215 2.625639 ACCCAACTTCCTCTCACATCT 58.374 47.619 0.00 0.00 0.00 2.90
215 216 2.982488 ACCCAACTTCCTCTCACATCTT 59.018 45.455 0.00 0.00 0.00 2.40
216 217 3.008485 ACCCAACTTCCTCTCACATCTTC 59.992 47.826 0.00 0.00 0.00 2.87
217 218 3.008375 CCCAACTTCCTCTCACATCTTCA 59.992 47.826 0.00 0.00 0.00 3.02
218 219 4.324099 CCCAACTTCCTCTCACATCTTCAT 60.324 45.833 0.00 0.00 0.00 2.57
219 220 4.874966 CCAACTTCCTCTCACATCTTCATC 59.125 45.833 0.00 0.00 0.00 2.92
220 221 5.338219 CCAACTTCCTCTCACATCTTCATCT 60.338 44.000 0.00 0.00 0.00 2.90
221 222 5.596836 ACTTCCTCTCACATCTTCATCTC 57.403 43.478 0.00 0.00 0.00 2.75
222 223 5.271598 ACTTCCTCTCACATCTTCATCTCT 58.728 41.667 0.00 0.00 0.00 3.10
223 224 5.721000 ACTTCCTCTCACATCTTCATCTCTT 59.279 40.000 0.00 0.00 0.00 2.85
224 225 5.850557 TCCTCTCACATCTTCATCTCTTC 57.149 43.478 0.00 0.00 0.00 2.87
225 226 4.337836 TCCTCTCACATCTTCATCTCTTCG 59.662 45.833 0.00 0.00 0.00 3.79
226 227 4.039151 TCTCACATCTTCATCTCTTCGC 57.961 45.455 0.00 0.00 0.00 4.70
227 228 2.788233 CTCACATCTTCATCTCTTCGCG 59.212 50.000 0.00 0.00 0.00 5.87
228 229 2.423538 TCACATCTTCATCTCTTCGCGA 59.576 45.455 3.71 3.71 0.00 5.87
229 230 2.788233 CACATCTTCATCTCTTCGCGAG 59.212 50.000 9.59 3.89 41.30 5.03
230 231 2.223688 ACATCTTCATCTCTTCGCGAGG 60.224 50.000 12.67 12.67 40.30 4.63
231 232 1.751437 TCTTCATCTCTTCGCGAGGA 58.249 50.000 20.42 20.42 40.30 3.71
232 233 2.092323 TCTTCATCTCTTCGCGAGGAA 58.908 47.619 21.87 12.97 40.30 3.36
242 243 3.944422 TTCGCGAGGAAGATTTTATGC 57.056 42.857 9.59 0.00 0.00 3.14
243 244 2.210116 TCGCGAGGAAGATTTTATGCC 58.790 47.619 3.71 0.00 0.00 4.40
244 245 1.939934 CGCGAGGAAGATTTTATGCCA 59.060 47.619 0.00 0.00 0.00 4.92
245 246 2.549754 CGCGAGGAAGATTTTATGCCAT 59.450 45.455 0.00 0.00 0.00 4.40
246 247 3.364366 CGCGAGGAAGATTTTATGCCATC 60.364 47.826 0.00 0.00 0.00 3.51
247 248 3.057946 GCGAGGAAGATTTTATGCCATCC 60.058 47.826 0.00 0.00 0.00 3.51
248 249 4.136796 CGAGGAAGATTTTATGCCATCCA 58.863 43.478 0.00 0.00 0.00 3.41
249 250 4.580167 CGAGGAAGATTTTATGCCATCCAA 59.420 41.667 0.00 0.00 0.00 3.53
250 251 5.242393 CGAGGAAGATTTTATGCCATCCAAT 59.758 40.000 0.00 0.00 0.00 3.16
251 252 6.569226 CGAGGAAGATTTTATGCCATCCAATC 60.569 42.308 0.00 2.02 0.00 2.67
252 253 6.138263 AGGAAGATTTTATGCCATCCAATCA 58.862 36.000 10.03 0.00 0.00 2.57
253 254 6.612456 AGGAAGATTTTATGCCATCCAATCAA 59.388 34.615 10.03 0.00 0.00 2.57
254 255 6.703165 GGAAGATTTTATGCCATCCAATCAAC 59.297 38.462 10.03 5.00 0.00 3.18
255 256 6.795144 AGATTTTATGCCATCCAATCAACA 57.205 33.333 10.03 0.00 0.00 3.33
256 257 7.369551 AGATTTTATGCCATCCAATCAACAT 57.630 32.000 10.03 0.00 0.00 2.71
257 258 8.481492 AGATTTTATGCCATCCAATCAACATA 57.519 30.769 10.03 0.00 0.00 2.29
258 259 9.096823 AGATTTTATGCCATCCAATCAACATAT 57.903 29.630 10.03 0.00 0.00 1.78
259 260 9.715121 GATTTTATGCCATCCAATCAACATATT 57.285 29.630 4.60 0.00 0.00 1.28
262 263 9.979578 TTTATGCCATCCAATCAACATATTTAC 57.020 29.630 0.00 0.00 0.00 2.01
263 264 7.844493 ATGCCATCCAATCAACATATTTACT 57.156 32.000 0.00 0.00 0.00 2.24
264 265 8.938801 ATGCCATCCAATCAACATATTTACTA 57.061 30.769 0.00 0.00 0.00 1.82
265 266 8.938801 TGCCATCCAATCAACATATTTACTAT 57.061 30.769 0.00 0.00 0.00 2.12
292 293 8.831715 AAAATGAGTGTTTTCCAATGAATACC 57.168 30.769 0.00 0.00 33.15 2.73
293 294 5.975693 TGAGTGTTTTCCAATGAATACCC 57.024 39.130 0.00 0.00 33.15 3.69
294 295 4.770010 TGAGTGTTTTCCAATGAATACCCC 59.230 41.667 0.00 0.00 33.15 4.95
295 296 4.746466 AGTGTTTTCCAATGAATACCCCA 58.254 39.130 0.00 0.00 33.15 4.96
296 297 5.151454 AGTGTTTTCCAATGAATACCCCAA 58.849 37.500 0.00 0.00 33.15 4.12
297 298 5.604650 AGTGTTTTCCAATGAATACCCCAAA 59.395 36.000 0.00 0.00 33.15 3.28
298 299 6.272090 AGTGTTTTCCAATGAATACCCCAAAT 59.728 34.615 0.00 0.00 33.15 2.32
299 300 6.593770 GTGTTTTCCAATGAATACCCCAAATC 59.406 38.462 0.00 0.00 33.15 2.17
300 301 6.500049 TGTTTTCCAATGAATACCCCAAATCT 59.500 34.615 0.00 0.00 33.15 2.40
301 302 6.790232 TTTCCAATGAATACCCCAAATCTC 57.210 37.500 0.00 0.00 0.00 2.75
302 303 5.732331 TCCAATGAATACCCCAAATCTCT 57.268 39.130 0.00 0.00 0.00 3.10
303 304 6.091076 TCCAATGAATACCCCAAATCTCTT 57.909 37.500 0.00 0.00 0.00 2.85
304 305 5.893255 TCCAATGAATACCCCAAATCTCTTG 59.107 40.000 0.00 0.00 0.00 3.02
305 306 5.893255 CCAATGAATACCCCAAATCTCTTGA 59.107 40.000 0.00 0.00 0.00 3.02
306 307 6.552350 CCAATGAATACCCCAAATCTCTTGAT 59.448 38.462 0.00 0.00 33.70 2.57
307 308 7.070322 CCAATGAATACCCCAAATCTCTTGATT 59.930 37.037 0.00 0.00 44.08 2.57
320 321 6.830873 ATCTCTTGATTTTGGAGAAACTGG 57.169 37.500 0.00 0.00 39.17 4.00
321 322 5.940617 TCTCTTGATTTTGGAGAAACTGGA 58.059 37.500 0.00 0.00 33.82 3.86
322 323 5.765182 TCTCTTGATTTTGGAGAAACTGGAC 59.235 40.000 0.00 0.00 33.82 4.02
323 324 5.445069 TCTTGATTTTGGAGAAACTGGACA 58.555 37.500 0.00 0.00 0.00 4.02
324 325 5.890985 TCTTGATTTTGGAGAAACTGGACAA 59.109 36.000 0.00 0.00 0.00 3.18
325 326 6.379703 TCTTGATTTTGGAGAAACTGGACAAA 59.620 34.615 0.00 0.00 0.00 2.83
326 327 6.537453 TGATTTTGGAGAAACTGGACAAAA 57.463 33.333 0.00 0.00 42.81 2.44
327 328 6.940739 TGATTTTGGAGAAACTGGACAAAAA 58.059 32.000 0.00 0.00 42.19 1.94
328 329 7.041107 TGATTTTGGAGAAACTGGACAAAAAG 58.959 34.615 0.00 0.00 42.19 2.27
329 330 5.337578 TTTGGAGAAACTGGACAAAAAGG 57.662 39.130 0.00 0.00 0.00 3.11
330 331 3.295973 TGGAGAAACTGGACAAAAAGGG 58.704 45.455 0.00 0.00 0.00 3.95
331 332 3.296854 GGAGAAACTGGACAAAAAGGGT 58.703 45.455 0.00 0.00 0.00 4.34
332 333 4.079672 TGGAGAAACTGGACAAAAAGGGTA 60.080 41.667 0.00 0.00 0.00 3.69
333 334 4.519350 GGAGAAACTGGACAAAAAGGGTAG 59.481 45.833 0.00 0.00 0.00 3.18
334 335 3.889538 AGAAACTGGACAAAAAGGGTAGC 59.110 43.478 0.00 0.00 0.00 3.58
335 336 2.287977 ACTGGACAAAAAGGGTAGCC 57.712 50.000 1.60 1.60 0.00 3.93
336 337 1.165270 CTGGACAAAAAGGGTAGCCG 58.835 55.000 5.06 0.00 0.00 5.52
337 338 0.475044 TGGACAAAAAGGGTAGCCGT 59.525 50.000 5.06 0.00 0.00 5.68
338 339 0.879090 GGACAAAAAGGGTAGCCGTG 59.121 55.000 5.06 5.47 0.00 4.94
339 340 1.601166 GACAAAAAGGGTAGCCGTGT 58.399 50.000 5.06 8.66 0.00 4.49
340 341 1.951602 GACAAAAAGGGTAGCCGTGTT 59.048 47.619 5.06 0.04 0.00 3.32
341 342 1.679153 ACAAAAAGGGTAGCCGTGTTG 59.321 47.619 23.25 23.25 0.00 3.33
342 343 0.671796 AAAAAGGGTAGCCGTGTTGC 59.328 50.000 5.06 0.00 0.00 4.17
343 344 1.176619 AAAAGGGTAGCCGTGTTGCC 61.177 55.000 5.06 0.00 0.00 4.52
344 345 2.346284 AAAGGGTAGCCGTGTTGCCA 62.346 55.000 5.06 0.00 0.00 4.92
345 346 2.045340 GGGTAGCCGTGTTGCCAT 60.045 61.111 0.00 0.00 0.00 4.40
346 347 1.222387 GGGTAGCCGTGTTGCCATA 59.778 57.895 0.00 0.00 0.00 2.74
347 348 0.393267 GGGTAGCCGTGTTGCCATAA 60.393 55.000 0.00 0.00 0.00 1.90
348 349 1.455248 GGTAGCCGTGTTGCCATAAA 58.545 50.000 0.00 0.00 0.00 1.40
349 350 1.813786 GGTAGCCGTGTTGCCATAAAA 59.186 47.619 0.00 0.00 0.00 1.52
350 351 2.425668 GGTAGCCGTGTTGCCATAAAAT 59.574 45.455 0.00 0.00 0.00 1.82
351 352 2.652941 AGCCGTGTTGCCATAAAATG 57.347 45.000 0.00 0.00 0.00 2.32
352 353 0.998669 GCCGTGTTGCCATAAAATGC 59.001 50.000 0.00 0.00 0.00 3.56
353 354 1.671261 GCCGTGTTGCCATAAAATGCA 60.671 47.619 0.00 0.00 35.27 3.96
354 355 2.261345 CCGTGTTGCCATAAAATGCAG 58.739 47.619 0.00 0.00 38.95 4.41
355 356 2.094803 CCGTGTTGCCATAAAATGCAGA 60.095 45.455 0.00 0.00 38.95 4.26
356 357 3.573598 CGTGTTGCCATAAAATGCAGAA 58.426 40.909 0.00 0.00 38.95 3.02
357 358 3.986572 CGTGTTGCCATAAAATGCAGAAA 59.013 39.130 0.00 0.00 38.95 2.52
358 359 4.447054 CGTGTTGCCATAAAATGCAGAAAA 59.553 37.500 0.00 0.00 38.95 2.29
359 360 5.120519 CGTGTTGCCATAAAATGCAGAAAAT 59.879 36.000 0.00 0.00 38.95 1.82
360 361 6.536688 GTGTTGCCATAAAATGCAGAAAATC 58.463 36.000 0.00 0.00 38.95 2.17
361 362 5.642919 TGTTGCCATAAAATGCAGAAAATCC 59.357 36.000 0.00 0.00 38.95 3.01
362 363 4.768583 TGCCATAAAATGCAGAAAATCCC 58.231 39.130 0.00 0.00 32.77 3.85
363 364 4.224594 TGCCATAAAATGCAGAAAATCCCA 59.775 37.500 0.00 0.00 32.77 4.37
364 365 4.571984 GCCATAAAATGCAGAAAATCCCAC 59.428 41.667 0.00 0.00 0.00 4.61
365 366 5.732633 CCATAAAATGCAGAAAATCCCACA 58.267 37.500 0.00 0.00 0.00 4.17
366 367 6.350906 CCATAAAATGCAGAAAATCCCACAT 58.649 36.000 0.00 0.00 0.00 3.21
367 368 6.480981 CCATAAAATGCAGAAAATCCCACATC 59.519 38.462 0.00 0.00 0.00 3.06
368 369 5.750352 AAAATGCAGAAAATCCCACATCT 57.250 34.783 0.00 0.00 0.00 2.90
369 370 6.855763 AAAATGCAGAAAATCCCACATCTA 57.144 33.333 0.00 0.00 0.00 1.98
370 371 5.841957 AATGCAGAAAATCCCACATCTAC 57.158 39.130 0.00 0.00 0.00 2.59
371 372 3.270027 TGCAGAAAATCCCACATCTACG 58.730 45.455 0.00 0.00 0.00 3.51
372 373 3.055458 TGCAGAAAATCCCACATCTACGA 60.055 43.478 0.00 0.00 0.00 3.43
373 374 4.130118 GCAGAAAATCCCACATCTACGAT 58.870 43.478 0.00 0.00 0.00 3.73
374 375 4.024556 GCAGAAAATCCCACATCTACGATG 60.025 45.833 2.49 2.49 0.00 3.84
375 376 4.024556 CAGAAAATCCCACATCTACGATGC 60.025 45.833 3.88 0.00 0.00 3.91
376 377 3.558931 AAATCCCACATCTACGATGCA 57.441 42.857 3.88 0.00 0.00 3.96
382 383 3.190327 CCCACATCTACGATGCAAAAACA 59.810 43.478 3.88 0.00 0.00 2.83
399 400 9.409312 TGCAAAAACATTAAGTAGAACATGATG 57.591 29.630 0.00 0.00 0.00 3.07
431 433 7.553760 TGCACTCATCACACATTATTCTATTGT 59.446 33.333 0.00 0.00 0.00 2.71
436 438 7.984617 TCATCACACATTATTCTATTGTTCCGA 59.015 33.333 0.00 0.00 0.00 4.55
444 446 1.621317 TCTATTGTTCCGACAGTGGCA 59.379 47.619 0.00 0.00 37.04 4.92
446 448 1.227999 ATTGTTCCGACAGTGGCACG 61.228 55.000 12.71 9.83 37.04 5.34
455 457 2.000447 GACAGTGGCACGGAATTCTAC 59.000 52.381 24.38 3.25 0.00 2.59
459 461 0.981183 TGGCACGGAATTCTACAGGT 59.019 50.000 5.23 0.00 0.00 4.00
472 474 1.531149 CTACAGGTGGCAACTTTGACG 59.469 52.381 0.00 0.00 39.74 4.35
479 481 0.040425 GGCAACTTTGACGCGTCATT 60.040 50.000 39.38 28.30 39.64 2.57
488 490 0.026285 GACGCGTCATTGGTATGTGC 59.974 55.000 33.09 1.78 33.34 4.57
506 508 1.819229 CGTGGTGGAGAGGATGGAG 59.181 63.158 0.00 0.00 0.00 3.86
509 511 0.031716 TGGTGGAGAGGATGGAGGAG 60.032 60.000 0.00 0.00 0.00 3.69
512 514 1.063266 GTGGAGAGGATGGAGGAGTCT 60.063 57.143 0.00 0.00 0.00 3.24
516 518 2.958355 GAGAGGATGGAGGAGTCTCAAG 59.042 54.545 1.47 0.00 41.69 3.02
522 524 2.182827 TGGAGGAGTCTCAAGGATGTG 58.817 52.381 1.47 0.00 41.69 3.21
525 527 4.219115 GGAGGAGTCTCAAGGATGTGATA 58.781 47.826 1.47 0.00 41.69 2.15
558 560 5.906113 TTTGCTTCAGTGGTTTTCTTGTA 57.094 34.783 0.00 0.00 0.00 2.41
564 567 6.459573 GCTTCAGTGGTTTTCTTGTAATGTGA 60.460 38.462 0.00 0.00 0.00 3.58
565 568 7.581213 TTCAGTGGTTTTCTTGTAATGTGAT 57.419 32.000 0.00 0.00 0.00 3.06
595 598 9.562583 CGATTAATTAGTATAGAGTCTTGGCTC 57.437 37.037 0.00 0.00 35.82 4.70
600 603 7.898014 TTAGTATAGAGTCTTGGCTCATTCA 57.102 36.000 0.00 0.00 37.94 2.57
604 607 4.630644 AGAGTCTTGGCTCATTCAGAAA 57.369 40.909 5.00 0.00 37.94 2.52
647 650 4.724074 AACACATTTGCACATCATAGGG 57.276 40.909 0.00 0.00 0.00 3.53
659 662 0.821517 TCATAGGGCACACGTCGAAT 59.178 50.000 0.00 0.00 0.00 3.34
661 664 2.427812 TCATAGGGCACACGTCGAATAA 59.572 45.455 0.00 0.00 0.00 1.40
666 669 3.119990 AGGGCACACGTCGAATAAATTTG 60.120 43.478 0.00 0.00 0.00 2.32
680 689 8.024865 TCGAATAAATTTGACGTCTCTTGTAGA 58.975 33.333 17.92 2.30 0.00 2.59
693 702 6.958193 CGTCTCTTGTAGAATTCTCAAAATGC 59.042 38.462 12.24 6.57 35.47 3.56
694 703 7.360353 CGTCTCTTGTAGAATTCTCAAAATGCA 60.360 37.037 12.24 0.00 35.47 3.96
695 704 7.961827 GTCTCTTGTAGAATTCTCAAAATGCAG 59.038 37.037 12.24 4.01 35.47 4.41
696 705 7.879677 TCTCTTGTAGAATTCTCAAAATGCAGA 59.120 33.333 12.24 7.61 0.00 4.26
727 736 8.121305 AGAAAACACATAATTGAAGTGGCATA 57.879 30.769 10.25 0.00 37.58 3.14
746 755 5.241662 GCATACCCTCTCAAATCCTACATC 58.758 45.833 0.00 0.00 0.00 3.06
782 792 5.915196 GGGATTTATTAGATCAAAAGCGTGC 59.085 40.000 0.00 0.00 0.00 5.34
847 886 1.872313 CCCTCTCCGACTCGTACATAC 59.128 57.143 0.00 0.00 0.00 2.39
848 887 2.485124 CCCTCTCCGACTCGTACATACT 60.485 54.545 0.00 0.00 0.00 2.12
849 888 2.801679 CCTCTCCGACTCGTACATACTC 59.198 54.545 0.00 0.00 0.00 2.59
850 889 2.801679 CTCTCCGACTCGTACATACTCC 59.198 54.545 0.00 0.00 0.00 3.85
851 890 1.872313 CTCCGACTCGTACATACTCCC 59.128 57.143 0.00 0.00 0.00 4.30
852 891 1.487976 TCCGACTCGTACATACTCCCT 59.512 52.381 0.00 0.00 0.00 4.20
853 892 1.872313 CCGACTCGTACATACTCCCTC 59.128 57.143 0.00 0.00 0.00 4.30
854 893 1.872313 CGACTCGTACATACTCCCTCC 59.128 57.143 0.00 0.00 0.00 4.30
855 894 1.872313 GACTCGTACATACTCCCTCCG 59.128 57.143 0.00 0.00 0.00 4.63
856 895 1.211457 ACTCGTACATACTCCCTCCGT 59.789 52.381 0.00 0.00 0.00 4.69
857 896 2.295885 CTCGTACATACTCCCTCCGTT 58.704 52.381 0.00 0.00 0.00 4.44
858 897 2.686915 CTCGTACATACTCCCTCCGTTT 59.313 50.000 0.00 0.00 0.00 3.60
859 898 3.091545 TCGTACATACTCCCTCCGTTTT 58.908 45.455 0.00 0.00 0.00 2.43
860 899 4.269183 TCGTACATACTCCCTCCGTTTTA 58.731 43.478 0.00 0.00 0.00 1.52
861 900 4.704540 TCGTACATACTCCCTCCGTTTTAA 59.295 41.667 0.00 0.00 0.00 1.52
862 901 5.184864 TCGTACATACTCCCTCCGTTTTAAA 59.815 40.000 0.00 0.00 0.00 1.52
863 902 5.868801 CGTACATACTCCCTCCGTTTTAAAA 59.131 40.000 0.00 0.00 0.00 1.52
864 903 6.536224 CGTACATACTCCCTCCGTTTTAAAAT 59.464 38.462 3.52 0.00 0.00 1.82
865 904 7.706179 CGTACATACTCCCTCCGTTTTAAAATA 59.294 37.037 3.52 0.00 0.00 1.40
866 905 9.038803 GTACATACTCCCTCCGTTTTAAAATAG 57.961 37.037 3.52 1.99 0.00 1.73
867 906 7.854337 ACATACTCCCTCCGTTTTAAAATAGA 58.146 34.615 3.52 3.61 0.00 1.98
868 907 8.491958 ACATACTCCCTCCGTTTTAAAATAGAT 58.508 33.333 3.52 0.00 0.00 1.98
869 908 8.774586 CATACTCCCTCCGTTTTAAAATAGATG 58.225 37.037 3.52 2.01 0.00 2.90
870 909 6.954232 ACTCCCTCCGTTTTAAAATAGATGA 58.046 36.000 3.52 3.96 0.00 2.92
871 910 7.574607 ACTCCCTCCGTTTTAAAATAGATGAT 58.425 34.615 3.52 0.00 0.00 2.45
872 911 7.715686 ACTCCCTCCGTTTTAAAATAGATGATC 59.284 37.037 3.52 0.00 0.00 2.92
873 912 6.996282 TCCCTCCGTTTTAAAATAGATGATCC 59.004 38.462 3.52 0.00 0.00 3.36
874 913 6.770785 CCCTCCGTTTTAAAATAGATGATCCA 59.229 38.462 3.52 0.00 0.00 3.41
875 914 7.284489 CCCTCCGTTTTAAAATAGATGATCCAA 59.716 37.037 3.52 0.00 0.00 3.53
876 915 8.129211 CCTCCGTTTTAAAATAGATGATCCAAC 58.871 37.037 3.52 0.00 0.00 3.77
877 916 8.801882 TCCGTTTTAAAATAGATGATCCAACT 57.198 30.769 3.52 0.00 0.00 3.16
878 917 9.238368 TCCGTTTTAAAATAGATGATCCAACTT 57.762 29.630 3.52 0.00 0.00 2.66
879 918 9.855021 CCGTTTTAAAATAGATGATCCAACTTT 57.145 29.630 3.52 0.00 0.00 2.66
921 960 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
922 961 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
923 962 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
924 963 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
925 964 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
926 965 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
927 966 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
928 967 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
929 968 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
930 969 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
970 1009 2.054687 TCGTTAGTTGCATCGTCGTT 57.945 45.000 0.00 0.00 0.00 3.85
975 1014 4.380290 GTTAGTTGCATCGTCGTTACAAC 58.620 43.478 10.22 10.22 40.65 3.32
1004 1043 0.960364 ACGCAAAGATTCGGCATGGT 60.960 50.000 0.00 0.00 0.00 3.55
1006 1045 0.179129 GCAAAGATTCGGCATGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
1007 1046 0.179129 CAAAGATTCGGCATGGTGGC 60.179 55.000 0.00 0.00 39.85 5.01
1369 1417 0.034059 CAACCTCTCGCTCCACAACT 59.966 55.000 0.00 0.00 0.00 3.16
1476 1527 2.268298 CGTTACCGTCTCAAATCCCTG 58.732 52.381 0.00 0.00 0.00 4.45
1521 1575 2.891936 GACGCGCATCATCTGGCA 60.892 61.111 5.73 0.00 0.00 4.92
1535 1589 2.334977 TCTGGCAACCTTCTTCTACCA 58.665 47.619 0.00 0.00 0.00 3.25
1633 1690 1.043673 GTGGATCTCCTACGCCAGGT 61.044 60.000 3.75 0.00 45.71 4.00
1700 1760 1.079127 AAGATCGGCACAACGGGAG 60.079 57.895 0.00 0.00 0.00 4.30
1707 1767 2.742372 CACAACGGGAGCGGAAGG 60.742 66.667 0.00 0.00 0.00 3.46
1819 1885 2.047274 CATCGTGGAAGGCGGTGT 60.047 61.111 0.00 0.00 35.92 4.16
1973 2057 2.202570 GGTGGATGACGACGACGG 60.203 66.667 12.58 0.00 44.46 4.79
2048 2153 2.048877 CCGGTCGGCGTGTTTACT 60.049 61.111 6.85 0.00 0.00 2.24
2054 2165 2.311701 CGGCGTGTTTACTGGCGAA 61.312 57.895 13.36 0.00 44.96 4.70
2057 2168 0.863144 GCGTGTTTACTGGCGAAGAA 59.137 50.000 0.00 0.00 0.00 2.52
2176 3592 0.471617 CAGGGCCTATGACCTCAAGG 59.528 60.000 5.28 0.00 42.17 3.61
2284 3954 2.205074 CGCCCAATCTGTACTAGCAAG 58.795 52.381 0.00 0.00 0.00 4.01
2285 3955 2.418746 CGCCCAATCTGTACTAGCAAGT 60.419 50.000 0.00 0.00 39.91 3.16
2308 5583 3.586470 TGTAACCAGGCCTTCAGAAAA 57.414 42.857 0.00 0.00 0.00 2.29
2340 5618 1.604604 AGTATGTGCGTTGGCTTGTT 58.395 45.000 0.00 0.00 40.82 2.83
2342 5620 3.343617 AGTATGTGCGTTGGCTTGTTAT 58.656 40.909 0.00 0.00 40.82 1.89
2439 5719 4.631377 TGAATCTACTCCTTTGCATCGTTG 59.369 41.667 0.00 0.00 0.00 4.10
2444 5724 2.484264 ACTCCTTTGCATCGTTGTTAGC 59.516 45.455 0.00 0.00 0.00 3.09
2457 5737 3.568538 GTTGTTAGCTGCATTGTTCCTG 58.431 45.455 1.02 0.00 0.00 3.86
2458 5738 3.138884 TGTTAGCTGCATTGTTCCTGA 57.861 42.857 1.02 0.00 0.00 3.86
2459 5739 3.485394 TGTTAGCTGCATTGTTCCTGAA 58.515 40.909 1.02 0.00 0.00 3.02
2522 5985 3.130633 TCACCAATCAGTGAACGAACAG 58.869 45.455 0.00 0.00 43.65 3.16
2523 5986 2.224079 CACCAATCAGTGAACGAACAGG 59.776 50.000 0.00 0.00 40.34 4.00
2524 5987 1.806542 CCAATCAGTGAACGAACAGGG 59.193 52.381 0.00 0.00 0.00 4.45
2525 5988 1.806542 CAATCAGTGAACGAACAGGGG 59.193 52.381 0.00 0.00 0.00 4.79
2528 5991 1.697432 TCAGTGAACGAACAGGGGAAT 59.303 47.619 0.00 0.00 0.00 3.01
2532 5995 2.235402 GTGAACGAACAGGGGAATAGGA 59.765 50.000 0.00 0.00 0.00 2.94
2533 5996 2.500098 TGAACGAACAGGGGAATAGGAG 59.500 50.000 0.00 0.00 0.00 3.69
2534 5997 2.544844 ACGAACAGGGGAATAGGAGA 57.455 50.000 0.00 0.00 0.00 3.71
2535 5998 2.389715 ACGAACAGGGGAATAGGAGAG 58.610 52.381 0.00 0.00 0.00 3.20
2536 5999 2.024273 ACGAACAGGGGAATAGGAGAGA 60.024 50.000 0.00 0.00 0.00 3.10
2537 6000 3.235200 CGAACAGGGGAATAGGAGAGAT 58.765 50.000 0.00 0.00 0.00 2.75
2538 6001 3.006323 CGAACAGGGGAATAGGAGAGATG 59.994 52.174 0.00 0.00 0.00 2.90
2539 6002 2.334023 ACAGGGGAATAGGAGAGATGC 58.666 52.381 0.00 0.00 0.00 3.91
2540 6003 2.090267 ACAGGGGAATAGGAGAGATGCT 60.090 50.000 0.00 0.00 0.00 3.79
2541 6004 3.142977 ACAGGGGAATAGGAGAGATGCTA 59.857 47.826 0.00 0.00 0.00 3.49
2542 6005 3.768757 CAGGGGAATAGGAGAGATGCTAG 59.231 52.174 0.00 0.00 0.00 3.42
2543 6006 3.665121 AGGGGAATAGGAGAGATGCTAGA 59.335 47.826 0.00 0.00 0.00 2.43
2544 6007 3.767131 GGGGAATAGGAGAGATGCTAGAC 59.233 52.174 0.00 0.00 0.00 2.59
2545 6008 3.442273 GGGAATAGGAGAGATGCTAGACG 59.558 52.174 0.00 0.00 0.00 4.18
2546 6009 3.119637 GGAATAGGAGAGATGCTAGACGC 60.120 52.174 0.00 0.00 39.77 5.19
2619 6082 5.885230 TGATCATCAATCAAGGAACACAC 57.115 39.130 0.00 0.00 41.49 3.82
2633 6096 6.817765 AGGAACACACTGTACATAAATTGG 57.182 37.500 0.00 0.00 0.00 3.16
2641 6104 5.064707 CACTGTACATAAATTGGTTCCTCCG 59.935 44.000 0.00 0.00 39.52 4.63
2683 6146 9.553064 CTTGCCATCTTGTATTAATTAGAGAGT 57.447 33.333 0.00 0.00 0.00 3.24
2843 6313 2.268920 GCAGCATTGGGAGGTCGA 59.731 61.111 0.00 0.00 0.00 4.20
2939 8955 1.267574 TGCCCTGCAAAACCAACCAA 61.268 50.000 0.00 0.00 34.76 3.67
2951 8967 3.721087 ACCAACCAAGATCTTACCTGG 57.279 47.619 19.86 19.86 0.00 4.45
3085 9138 3.502211 AGTTGCTCCACTGAAAATTACGG 59.498 43.478 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.420374 TCTAAAGGAACTATAGATTTGCAACG 57.580 34.615 6.78 0.00 38.49 4.10
2 3 7.499232 GGCTCTAAAGGAACTATAGATTTGCAA 59.501 37.037 6.78 0.00 38.49 4.08
5 6 9.699703 GTAGGCTCTAAAGGAACTATAGATTTG 57.300 37.037 6.78 0.00 38.49 2.32
6 7 9.435570 TGTAGGCTCTAAAGGAACTATAGATTT 57.564 33.333 6.78 4.79 38.49 2.17
7 8 9.608718 ATGTAGGCTCTAAAGGAACTATAGATT 57.391 33.333 6.78 0.00 38.49 2.40
8 9 9.030452 CATGTAGGCTCTAAAGGAACTATAGAT 57.970 37.037 6.78 0.00 38.49 1.98
9 10 8.225416 TCATGTAGGCTCTAAAGGAACTATAGA 58.775 37.037 6.78 0.00 38.49 1.98
10 11 8.301002 GTCATGTAGGCTCTAAAGGAACTATAG 58.699 40.741 0.00 0.00 38.49 1.31
11 12 7.783119 TGTCATGTAGGCTCTAAAGGAACTATA 59.217 37.037 0.00 0.00 38.49 1.31
12 13 6.611642 TGTCATGTAGGCTCTAAAGGAACTAT 59.388 38.462 0.00 0.00 38.49 2.12
13 14 5.955959 TGTCATGTAGGCTCTAAAGGAACTA 59.044 40.000 0.00 0.00 38.49 2.24
15 16 4.870991 GTGTCATGTAGGCTCTAAAGGAAC 59.129 45.833 0.00 0.00 0.00 3.62
16 17 4.081087 GGTGTCATGTAGGCTCTAAAGGAA 60.081 45.833 0.00 0.00 0.00 3.36
17 18 3.451178 GGTGTCATGTAGGCTCTAAAGGA 59.549 47.826 0.00 0.00 0.00 3.36
18 19 3.452627 AGGTGTCATGTAGGCTCTAAAGG 59.547 47.826 0.00 0.00 0.00 3.11
19 20 4.744795 AGGTGTCATGTAGGCTCTAAAG 57.255 45.455 0.00 0.00 0.00 1.85
20 21 5.020795 TGTAGGTGTCATGTAGGCTCTAAA 58.979 41.667 0.00 0.00 0.00 1.85
21 22 4.401519 GTGTAGGTGTCATGTAGGCTCTAA 59.598 45.833 0.00 0.00 0.00 2.10
22 23 3.952323 GTGTAGGTGTCATGTAGGCTCTA 59.048 47.826 0.00 0.00 0.00 2.43
23 24 2.761208 GTGTAGGTGTCATGTAGGCTCT 59.239 50.000 0.00 0.00 0.00 4.09
24 25 2.761208 AGTGTAGGTGTCATGTAGGCTC 59.239 50.000 0.00 0.00 0.00 4.70
25 26 2.821437 AGTGTAGGTGTCATGTAGGCT 58.179 47.619 0.00 0.00 0.00 4.58
26 27 4.401519 TCTTAGTGTAGGTGTCATGTAGGC 59.598 45.833 0.00 0.00 0.00 3.93
27 28 5.652891 ACTCTTAGTGTAGGTGTCATGTAGG 59.347 44.000 0.00 0.00 0.00 3.18
28 29 6.374613 TGACTCTTAGTGTAGGTGTCATGTAG 59.625 42.308 0.00 0.00 30.31 2.74
29 30 6.150641 GTGACTCTTAGTGTAGGTGTCATGTA 59.849 42.308 0.00 0.00 34.36 2.29
30 31 5.047943 GTGACTCTTAGTGTAGGTGTCATGT 60.048 44.000 0.00 0.00 34.36 3.21
31 32 5.403246 GTGACTCTTAGTGTAGGTGTCATG 58.597 45.833 0.00 0.00 34.36 3.07
32 33 4.463186 GGTGACTCTTAGTGTAGGTGTCAT 59.537 45.833 0.00 0.00 34.36 3.06
33 34 3.825014 GGTGACTCTTAGTGTAGGTGTCA 59.175 47.826 0.00 0.00 31.66 3.58
34 35 3.119919 CGGTGACTCTTAGTGTAGGTGTC 60.120 52.174 0.00 0.00 0.00 3.67
35 36 2.818432 CGGTGACTCTTAGTGTAGGTGT 59.182 50.000 0.00 0.00 0.00 4.16
36 37 3.079578 TCGGTGACTCTTAGTGTAGGTG 58.920 50.000 0.00 0.00 0.00 4.00
37 38 3.430042 TCGGTGACTCTTAGTGTAGGT 57.570 47.619 0.00 0.00 0.00 3.08
38 39 4.008330 TCTTCGGTGACTCTTAGTGTAGG 58.992 47.826 0.00 0.00 0.00 3.18
39 40 5.181622 AGTTCTTCGGTGACTCTTAGTGTAG 59.818 44.000 0.00 0.00 0.00 2.74
40 41 5.068636 AGTTCTTCGGTGACTCTTAGTGTA 58.931 41.667 0.00 0.00 0.00 2.90
41 42 3.890147 AGTTCTTCGGTGACTCTTAGTGT 59.110 43.478 0.00 0.00 0.00 3.55
42 43 4.506886 AGTTCTTCGGTGACTCTTAGTG 57.493 45.455 0.00 0.00 0.00 2.74
43 44 4.796618 GCAAGTTCTTCGGTGACTCTTAGT 60.797 45.833 0.00 0.00 0.00 2.24
44 45 3.675698 GCAAGTTCTTCGGTGACTCTTAG 59.324 47.826 0.00 0.00 0.00 2.18
45 46 3.069016 TGCAAGTTCTTCGGTGACTCTTA 59.931 43.478 0.00 0.00 0.00 2.10
46 47 2.158957 TGCAAGTTCTTCGGTGACTCTT 60.159 45.455 0.00 0.00 0.00 2.85
47 48 1.412710 TGCAAGTTCTTCGGTGACTCT 59.587 47.619 0.00 0.00 0.00 3.24
48 49 1.527311 GTGCAAGTTCTTCGGTGACTC 59.473 52.381 0.00 0.00 0.00 3.36
49 50 1.134521 TGTGCAAGTTCTTCGGTGACT 60.135 47.619 0.00 0.00 0.00 3.41
50 51 1.261619 CTGTGCAAGTTCTTCGGTGAC 59.738 52.381 0.00 0.00 0.00 3.67
51 52 1.134521 ACTGTGCAAGTTCTTCGGTGA 60.135 47.619 0.00 0.00 34.57 4.02
52 53 1.261619 GACTGTGCAAGTTCTTCGGTG 59.738 52.381 0.00 0.00 40.07 4.94
53 54 1.583054 GACTGTGCAAGTTCTTCGGT 58.417 50.000 0.00 0.00 40.07 4.69
54 55 0.868406 GGACTGTGCAAGTTCTTCGG 59.132 55.000 0.00 0.00 40.07 4.30
55 56 1.795286 GAGGACTGTGCAAGTTCTTCG 59.205 52.381 10.12 0.00 45.58 3.79
56 57 3.118905 AGAGGACTGTGCAAGTTCTTC 57.881 47.619 10.12 3.36 45.58 2.87
57 58 4.530161 AGATAGAGGACTGTGCAAGTTCTT 59.470 41.667 10.12 5.08 45.58 2.52
59 60 4.464069 AGATAGAGGACTGTGCAAGTTC 57.536 45.455 1.24 0.00 40.07 3.01
60 61 4.530161 AGAAGATAGAGGACTGTGCAAGTT 59.470 41.667 1.24 0.00 40.07 2.66
61 62 4.081752 CAGAAGATAGAGGACTGTGCAAGT 60.082 45.833 1.24 0.00 43.85 3.16
62 63 4.081752 ACAGAAGATAGAGGACTGTGCAAG 60.082 45.833 1.24 0.00 39.76 4.01
63 64 3.834813 ACAGAAGATAGAGGACTGTGCAA 59.165 43.478 1.24 0.00 39.76 4.08
64 65 3.435275 ACAGAAGATAGAGGACTGTGCA 58.565 45.455 1.24 0.00 39.76 4.57
65 66 4.464069 AACAGAAGATAGAGGACTGTGC 57.536 45.455 0.00 0.00 40.82 4.57
66 67 7.397892 TCTAAACAGAAGATAGAGGACTGTG 57.602 40.000 0.00 0.00 40.82 3.66
67 68 7.451877 TGTTCTAAACAGAAGATAGAGGACTGT 59.548 37.037 0.00 0.00 42.40 3.55
68 69 7.831753 TGTTCTAAACAGAAGATAGAGGACTG 58.168 38.462 0.00 0.00 36.25 3.51
69 70 8.602472 ATGTTCTAAACAGAAGATAGAGGACT 57.398 34.615 0.00 0.00 45.95 3.85
70 71 7.923878 GGATGTTCTAAACAGAAGATAGAGGAC 59.076 40.741 0.00 0.00 45.95 3.85
71 72 7.619698 TGGATGTTCTAAACAGAAGATAGAGGA 59.380 37.037 0.00 0.00 45.95 3.71
72 73 7.786030 TGGATGTTCTAAACAGAAGATAGAGG 58.214 38.462 0.00 0.00 45.95 3.69
73 74 8.690884 TCTGGATGTTCTAAACAGAAGATAGAG 58.309 37.037 0.00 0.00 45.95 2.43
74 75 8.595362 TCTGGATGTTCTAAACAGAAGATAGA 57.405 34.615 0.00 0.00 45.95 1.98
75 76 9.092876 GTTCTGGATGTTCTAAACAGAAGATAG 57.907 37.037 5.74 0.00 45.53 2.08
76 77 8.593679 TGTTCTGGATGTTCTAAACAGAAGATA 58.406 33.333 5.74 0.00 45.53 1.98
77 78 7.453393 TGTTCTGGATGTTCTAAACAGAAGAT 58.547 34.615 5.74 0.00 45.53 2.40
78 79 6.826668 TGTTCTGGATGTTCTAAACAGAAGA 58.173 36.000 5.74 2.50 45.53 2.87
79 80 7.605691 AGATGTTCTGGATGTTCTAAACAGAAG 59.394 37.037 5.74 0.00 45.53 2.85
80 81 7.453393 AGATGTTCTGGATGTTCTAAACAGAA 58.547 34.615 0.00 0.00 45.95 3.02
81 82 7.009179 AGATGTTCTGGATGTTCTAAACAGA 57.991 36.000 0.00 0.00 45.95 3.41
82 83 7.388776 TCAAGATGTTCTGGATGTTCTAAACAG 59.611 37.037 0.00 0.00 45.95 3.16
83 84 7.173218 GTCAAGATGTTCTGGATGTTCTAAACA 59.827 37.037 0.00 0.00 46.94 2.83
84 85 7.361286 GGTCAAGATGTTCTGGATGTTCTAAAC 60.361 40.741 0.00 0.00 27.53 2.01
85 86 6.655003 GGTCAAGATGTTCTGGATGTTCTAAA 59.345 38.462 0.00 0.00 27.53 1.85
86 87 6.173339 GGTCAAGATGTTCTGGATGTTCTAA 58.827 40.000 0.00 0.00 27.53 2.10
87 88 5.248248 TGGTCAAGATGTTCTGGATGTTCTA 59.752 40.000 0.00 0.00 27.53 2.10
88 89 4.042062 TGGTCAAGATGTTCTGGATGTTCT 59.958 41.667 0.00 0.00 27.53 3.01
89 90 4.326826 TGGTCAAGATGTTCTGGATGTTC 58.673 43.478 0.00 0.00 27.53 3.18
90 91 4.371624 TGGTCAAGATGTTCTGGATGTT 57.628 40.909 0.00 0.00 27.53 2.71
91 92 4.581309 ATGGTCAAGATGTTCTGGATGT 57.419 40.909 0.00 0.00 27.53 3.06
92 93 4.514441 GCTATGGTCAAGATGTTCTGGATG 59.486 45.833 0.00 0.00 27.53 3.51
93 94 4.411540 AGCTATGGTCAAGATGTTCTGGAT 59.588 41.667 0.00 0.00 27.53 3.41
94 95 3.776969 AGCTATGGTCAAGATGTTCTGGA 59.223 43.478 0.00 0.00 0.00 3.86
95 96 3.875727 CAGCTATGGTCAAGATGTTCTGG 59.124 47.826 0.00 0.00 0.00 3.86
96 97 4.569966 GTCAGCTATGGTCAAGATGTTCTG 59.430 45.833 0.00 0.00 32.28 3.02
97 98 4.469227 AGTCAGCTATGGTCAAGATGTTCT 59.531 41.667 0.00 0.00 32.28 3.01
98 99 4.764172 AGTCAGCTATGGTCAAGATGTTC 58.236 43.478 0.00 0.00 32.28 3.18
99 100 4.833478 AGTCAGCTATGGTCAAGATGTT 57.167 40.909 0.00 0.00 32.28 2.71
100 101 5.204292 TCTAGTCAGCTATGGTCAAGATGT 58.796 41.667 0.00 0.00 32.28 3.06
101 102 5.781210 TCTAGTCAGCTATGGTCAAGATG 57.219 43.478 0.00 0.00 0.00 2.90
102 103 8.663209 AATATCTAGTCAGCTATGGTCAAGAT 57.337 34.615 0.00 0.00 0.00 2.40
103 104 7.947332 AGAATATCTAGTCAGCTATGGTCAAGA 59.053 37.037 0.00 0.00 0.00 3.02
104 105 8.028354 CAGAATATCTAGTCAGCTATGGTCAAG 58.972 40.741 0.00 0.00 0.00 3.02
105 106 7.725844 TCAGAATATCTAGTCAGCTATGGTCAA 59.274 37.037 0.00 0.00 0.00 3.18
106 107 7.234355 TCAGAATATCTAGTCAGCTATGGTCA 58.766 38.462 0.00 0.00 0.00 4.02
107 108 7.695480 TCAGAATATCTAGTCAGCTATGGTC 57.305 40.000 0.00 0.00 0.00 4.02
108 109 7.507277 TGTTCAGAATATCTAGTCAGCTATGGT 59.493 37.037 0.00 0.00 0.00 3.55
109 110 7.890515 TGTTCAGAATATCTAGTCAGCTATGG 58.109 38.462 0.00 0.00 0.00 2.74
110 111 9.755804 TTTGTTCAGAATATCTAGTCAGCTATG 57.244 33.333 0.00 0.00 0.00 2.23
112 113 9.587772 GTTTTGTTCAGAATATCTAGTCAGCTA 57.412 33.333 0.00 0.00 0.00 3.32
113 114 8.097038 TGTTTTGTTCAGAATATCTAGTCAGCT 58.903 33.333 0.00 0.00 0.00 4.24
114 115 8.256611 TGTTTTGTTCAGAATATCTAGTCAGC 57.743 34.615 0.00 0.00 0.00 4.26
115 116 9.429359 ACTGTTTTGTTCAGAATATCTAGTCAG 57.571 33.333 0.00 0.00 36.81 3.51
120 121 9.653287 CCACTACTGTTTTGTTCAGAATATCTA 57.347 33.333 0.00 0.00 36.81 1.98
121 122 8.157476 ACCACTACTGTTTTGTTCAGAATATCT 58.843 33.333 0.00 0.00 36.81 1.98
122 123 8.324163 ACCACTACTGTTTTGTTCAGAATATC 57.676 34.615 0.00 0.00 36.81 1.63
123 124 7.117812 CGACCACTACTGTTTTGTTCAGAATAT 59.882 37.037 0.00 0.00 36.81 1.28
124 125 6.422701 CGACCACTACTGTTTTGTTCAGAATA 59.577 38.462 0.00 0.00 36.81 1.75
125 126 5.236478 CGACCACTACTGTTTTGTTCAGAAT 59.764 40.000 0.00 0.00 36.81 2.40
126 127 4.569162 CGACCACTACTGTTTTGTTCAGAA 59.431 41.667 0.00 0.00 36.81 3.02
127 128 4.116961 CGACCACTACTGTTTTGTTCAGA 58.883 43.478 0.00 0.00 36.81 3.27
128 129 3.303132 GCGACCACTACTGTTTTGTTCAG 60.303 47.826 0.00 0.00 38.68 3.02
129 130 2.610374 GCGACCACTACTGTTTTGTTCA 59.390 45.455 0.00 0.00 0.00 3.18
130 131 2.348218 CGCGACCACTACTGTTTTGTTC 60.348 50.000 0.00 0.00 0.00 3.18
131 132 1.595794 CGCGACCACTACTGTTTTGTT 59.404 47.619 0.00 0.00 0.00 2.83
132 133 1.214367 CGCGACCACTACTGTTTTGT 58.786 50.000 0.00 0.00 0.00 2.83
133 134 0.110823 GCGCGACCACTACTGTTTTG 60.111 55.000 12.10 0.00 0.00 2.44
134 135 0.249741 AGCGCGACCACTACTGTTTT 60.250 50.000 12.10 0.00 0.00 2.43
135 136 0.666577 GAGCGCGACCACTACTGTTT 60.667 55.000 12.10 0.00 0.00 2.83
136 137 1.080705 GAGCGCGACCACTACTGTT 60.081 57.895 12.10 0.00 0.00 3.16
137 138 2.567049 GAGCGCGACCACTACTGT 59.433 61.111 12.10 0.00 0.00 3.55
138 139 1.974249 TACGAGCGCGACCACTACTG 61.974 60.000 19.05 0.00 41.64 2.74
139 140 1.742880 TACGAGCGCGACCACTACT 60.743 57.895 19.05 0.00 41.64 2.57
140 141 1.582168 GTACGAGCGCGACCACTAC 60.582 63.158 19.05 4.19 41.64 2.73
141 142 2.753966 GGTACGAGCGCGACCACTA 61.754 63.158 19.05 0.00 41.64 2.74
142 143 4.112341 GGTACGAGCGCGACCACT 62.112 66.667 19.05 0.00 41.64 4.00
155 156 1.204941 AGAGAAGATGGTGCACGGTAC 59.795 52.381 11.45 2.36 0.00 3.34
156 157 1.557099 AGAGAAGATGGTGCACGGTA 58.443 50.000 11.45 0.00 0.00 4.02
157 158 0.687354 AAGAGAAGATGGTGCACGGT 59.313 50.000 11.45 0.82 0.00 4.83
158 159 1.066573 AGAAGAGAAGATGGTGCACGG 60.067 52.381 11.45 0.00 0.00 4.94
159 160 2.376808 AGAAGAGAAGATGGTGCACG 57.623 50.000 11.45 0.00 0.00 5.34
160 161 4.727507 TCTAGAAGAGAAGATGGTGCAC 57.272 45.455 8.80 8.80 0.00 4.57
161 162 5.247110 ACTTTCTAGAAGAGAAGATGGTGCA 59.753 40.000 16.61 0.00 45.05 4.57
162 163 5.729510 ACTTTCTAGAAGAGAAGATGGTGC 58.270 41.667 16.61 0.00 45.05 5.01
163 164 6.091986 GCAACTTTCTAGAAGAGAAGATGGTG 59.908 42.308 16.61 4.14 45.05 4.17
164 165 6.169800 GCAACTTTCTAGAAGAGAAGATGGT 58.830 40.000 16.61 2.08 45.05 3.55
165 166 6.091986 GTGCAACTTTCTAGAAGAGAAGATGG 59.908 42.308 16.61 5.39 45.05 3.51
166 167 6.183360 CGTGCAACTTTCTAGAAGAGAAGATG 60.183 42.308 16.61 12.22 45.05 2.90
167 168 5.866633 CGTGCAACTTTCTAGAAGAGAAGAT 59.133 40.000 16.61 1.58 45.05 2.40
168 169 5.223382 CGTGCAACTTTCTAGAAGAGAAGA 58.777 41.667 16.61 0.00 45.05 2.87
169 170 4.143221 GCGTGCAACTTTCTAGAAGAGAAG 60.143 45.833 16.61 9.93 45.05 2.85
170 171 3.741344 GCGTGCAACTTTCTAGAAGAGAA 59.259 43.478 16.61 0.00 42.69 2.87
171 172 3.243737 TGCGTGCAACTTTCTAGAAGAGA 60.244 43.478 16.61 0.00 31.75 3.10
172 173 3.059884 TGCGTGCAACTTTCTAGAAGAG 58.940 45.455 5.12 8.79 31.75 2.85
173 174 3.106242 TGCGTGCAACTTTCTAGAAGA 57.894 42.857 5.12 0.00 31.75 2.87
174 175 3.878086 TTGCGTGCAACTTTCTAGAAG 57.122 42.857 5.12 3.14 31.75 2.85
185 186 1.435515 GAAGTTGGGTTGCGTGCAA 59.564 52.632 2.58 2.58 0.00 4.08
186 187 2.485795 GGAAGTTGGGTTGCGTGCA 61.486 57.895 0.00 0.00 0.00 4.57
187 188 2.130073 GAGGAAGTTGGGTTGCGTGC 62.130 60.000 0.00 0.00 0.00 5.34
188 189 0.535102 AGAGGAAGTTGGGTTGCGTG 60.535 55.000 0.00 0.00 0.00 5.34
189 190 0.250338 GAGAGGAAGTTGGGTTGCGT 60.250 55.000 0.00 0.00 0.00 5.24
190 191 0.250295 TGAGAGGAAGTTGGGTTGCG 60.250 55.000 0.00 0.00 0.00 4.85
191 192 1.239347 GTGAGAGGAAGTTGGGTTGC 58.761 55.000 0.00 0.00 0.00 4.17
192 193 2.638480 TGTGAGAGGAAGTTGGGTTG 57.362 50.000 0.00 0.00 0.00 3.77
193 194 2.982488 AGATGTGAGAGGAAGTTGGGTT 59.018 45.455 0.00 0.00 0.00 4.11
194 195 2.625639 AGATGTGAGAGGAAGTTGGGT 58.374 47.619 0.00 0.00 0.00 4.51
195 196 3.008375 TGAAGATGTGAGAGGAAGTTGGG 59.992 47.826 0.00 0.00 0.00 4.12
196 197 4.277515 TGAAGATGTGAGAGGAAGTTGG 57.722 45.455 0.00 0.00 0.00 3.77
197 198 5.732633 AGATGAAGATGTGAGAGGAAGTTG 58.267 41.667 0.00 0.00 0.00 3.16
198 199 5.721000 AGAGATGAAGATGTGAGAGGAAGTT 59.279 40.000 0.00 0.00 0.00 2.66
199 200 5.271598 AGAGATGAAGATGTGAGAGGAAGT 58.728 41.667 0.00 0.00 0.00 3.01
200 201 5.857471 AGAGATGAAGATGTGAGAGGAAG 57.143 43.478 0.00 0.00 0.00 3.46
201 202 5.163571 CGAAGAGATGAAGATGTGAGAGGAA 60.164 44.000 0.00 0.00 0.00 3.36
202 203 4.337836 CGAAGAGATGAAGATGTGAGAGGA 59.662 45.833 0.00 0.00 0.00 3.71
203 204 4.609947 CGAAGAGATGAAGATGTGAGAGG 58.390 47.826 0.00 0.00 0.00 3.69
204 205 4.043750 GCGAAGAGATGAAGATGTGAGAG 58.956 47.826 0.00 0.00 0.00 3.20
205 206 3.488216 CGCGAAGAGATGAAGATGTGAGA 60.488 47.826 0.00 0.00 0.00 3.27
206 207 2.788233 CGCGAAGAGATGAAGATGTGAG 59.212 50.000 0.00 0.00 0.00 3.51
207 208 2.423538 TCGCGAAGAGATGAAGATGTGA 59.576 45.455 6.20 0.00 0.00 3.58
208 209 2.802256 TCGCGAAGAGATGAAGATGTG 58.198 47.619 6.20 0.00 0.00 3.21
222 223 2.612212 GGCATAAAATCTTCCTCGCGAA 59.388 45.455 11.33 0.00 0.00 4.70
223 224 2.210116 GGCATAAAATCTTCCTCGCGA 58.790 47.619 9.26 9.26 0.00 5.87
224 225 1.939934 TGGCATAAAATCTTCCTCGCG 59.060 47.619 0.00 0.00 0.00 5.87
225 226 3.057946 GGATGGCATAAAATCTTCCTCGC 60.058 47.826 0.00 0.00 0.00 5.03
226 227 4.136796 TGGATGGCATAAAATCTTCCTCG 58.863 43.478 0.00 0.00 0.00 4.63
227 228 6.266103 TGATTGGATGGCATAAAATCTTCCTC 59.734 38.462 24.06 8.24 0.00 3.71
228 229 6.138263 TGATTGGATGGCATAAAATCTTCCT 58.862 36.000 24.06 0.30 0.00 3.36
229 230 6.409524 TGATTGGATGGCATAAAATCTTCC 57.590 37.500 24.06 12.38 0.00 3.46
230 231 7.267128 TGTTGATTGGATGGCATAAAATCTTC 58.733 34.615 24.06 18.98 0.00 2.87
231 232 7.185318 TGTTGATTGGATGGCATAAAATCTT 57.815 32.000 24.06 2.48 0.00 2.40
232 233 6.795144 TGTTGATTGGATGGCATAAAATCT 57.205 33.333 24.06 3.04 0.00 2.40
233 234 9.715121 AATATGTTGATTGGATGGCATAAAATC 57.285 29.630 20.05 20.05 0.00 2.17
236 237 9.979578 GTAAATATGTTGATTGGATGGCATAAA 57.020 29.630 0.00 0.00 0.00 1.40
237 238 9.365906 AGTAAATATGTTGATTGGATGGCATAA 57.634 29.630 0.00 0.00 0.00 1.90
238 239 8.938801 AGTAAATATGTTGATTGGATGGCATA 57.061 30.769 0.00 0.00 0.00 3.14
239 240 7.844493 AGTAAATATGTTGATTGGATGGCAT 57.156 32.000 0.00 0.00 0.00 4.40
240 241 8.938801 ATAGTAAATATGTTGATTGGATGGCA 57.061 30.769 0.00 0.00 0.00 4.92
266 267 9.271828 GGTATTCATTGGAAAACACTCATTTTT 57.728 29.630 0.00 0.00 36.43 1.94
267 268 7.877612 GGGTATTCATTGGAAAACACTCATTTT 59.122 33.333 0.00 0.00 36.43 1.82
268 269 7.386059 GGGTATTCATTGGAAAACACTCATTT 58.614 34.615 0.00 0.00 36.43 2.32
269 270 6.070824 GGGGTATTCATTGGAAAACACTCATT 60.071 38.462 0.00 0.00 36.43 2.57
270 271 5.422012 GGGGTATTCATTGGAAAACACTCAT 59.578 40.000 0.00 0.00 36.43 2.90
271 272 4.770010 GGGGTATTCATTGGAAAACACTCA 59.230 41.667 0.00 0.00 36.43 3.41
272 273 4.770010 TGGGGTATTCATTGGAAAACACTC 59.230 41.667 0.00 0.00 36.43 3.51
273 274 4.746466 TGGGGTATTCATTGGAAAACACT 58.254 39.130 0.00 0.00 36.43 3.55
274 275 5.476091 TTGGGGTATTCATTGGAAAACAC 57.524 39.130 0.00 0.00 36.43 3.32
275 276 6.500049 AGATTTGGGGTATTCATTGGAAAACA 59.500 34.615 0.00 0.00 36.43 2.83
276 277 6.946340 AGATTTGGGGTATTCATTGGAAAAC 58.054 36.000 0.00 0.00 36.43 2.43
277 278 6.959366 AGAGATTTGGGGTATTCATTGGAAAA 59.041 34.615 0.00 0.00 36.43 2.29
278 279 6.502138 AGAGATTTGGGGTATTCATTGGAAA 58.498 36.000 0.00 0.00 36.43 3.13
279 280 6.091076 AGAGATTTGGGGTATTCATTGGAA 57.909 37.500 0.00 0.00 37.45 3.53
280 281 5.732331 AGAGATTTGGGGTATTCATTGGA 57.268 39.130 0.00 0.00 0.00 3.53
281 282 5.893255 TCAAGAGATTTGGGGTATTCATTGG 59.107 40.000 0.00 0.00 0.00 3.16
282 283 7.592885 ATCAAGAGATTTGGGGTATTCATTG 57.407 36.000 0.00 0.00 0.00 2.82
296 297 7.006509 TCCAGTTTCTCCAAAATCAAGAGATT 58.993 34.615 0.00 0.00 46.20 2.40
297 298 6.432472 GTCCAGTTTCTCCAAAATCAAGAGAT 59.568 38.462 0.00 0.00 36.57 2.75
298 299 5.765182 GTCCAGTTTCTCCAAAATCAAGAGA 59.235 40.000 0.00 0.00 34.90 3.10
299 300 5.532406 TGTCCAGTTTCTCCAAAATCAAGAG 59.468 40.000 0.00 0.00 0.00 2.85
300 301 5.445069 TGTCCAGTTTCTCCAAAATCAAGA 58.555 37.500 0.00 0.00 0.00 3.02
301 302 5.772825 TGTCCAGTTTCTCCAAAATCAAG 57.227 39.130 0.00 0.00 0.00 3.02
302 303 6.537453 TTTGTCCAGTTTCTCCAAAATCAA 57.463 33.333 0.00 0.00 0.00 2.57
303 304 6.537453 TTTTGTCCAGTTTCTCCAAAATCA 57.463 33.333 0.00 0.00 31.97 2.57
304 305 6.479990 CCTTTTTGTCCAGTTTCTCCAAAATC 59.520 38.462 0.00 0.00 35.61 2.17
305 306 6.348498 CCTTTTTGTCCAGTTTCTCCAAAAT 58.652 36.000 0.00 0.00 35.61 1.82
306 307 5.337975 CCCTTTTTGTCCAGTTTCTCCAAAA 60.338 40.000 0.00 0.00 34.29 2.44
307 308 4.161377 CCCTTTTTGTCCAGTTTCTCCAAA 59.839 41.667 0.00 0.00 0.00 3.28
308 309 3.704061 CCCTTTTTGTCCAGTTTCTCCAA 59.296 43.478 0.00 0.00 0.00 3.53
309 310 3.295973 CCCTTTTTGTCCAGTTTCTCCA 58.704 45.455 0.00 0.00 0.00 3.86
310 311 3.296854 ACCCTTTTTGTCCAGTTTCTCC 58.703 45.455 0.00 0.00 0.00 3.71
311 312 4.023107 GCTACCCTTTTTGTCCAGTTTCTC 60.023 45.833 0.00 0.00 0.00 2.87
312 313 3.889538 GCTACCCTTTTTGTCCAGTTTCT 59.110 43.478 0.00 0.00 0.00 2.52
313 314 3.005472 GGCTACCCTTTTTGTCCAGTTTC 59.995 47.826 0.00 0.00 0.00 2.78
314 315 2.963101 GGCTACCCTTTTTGTCCAGTTT 59.037 45.455 0.00 0.00 0.00 2.66
315 316 2.594131 GGCTACCCTTTTTGTCCAGTT 58.406 47.619 0.00 0.00 0.00 3.16
316 317 1.544759 CGGCTACCCTTTTTGTCCAGT 60.545 52.381 0.00 0.00 0.00 4.00
317 318 1.165270 CGGCTACCCTTTTTGTCCAG 58.835 55.000 0.00 0.00 0.00 3.86
318 319 0.475044 ACGGCTACCCTTTTTGTCCA 59.525 50.000 0.00 0.00 0.00 4.02
319 320 0.879090 CACGGCTACCCTTTTTGTCC 59.121 55.000 0.00 0.00 0.00 4.02
320 321 1.601166 ACACGGCTACCCTTTTTGTC 58.399 50.000 0.00 0.00 0.00 3.18
321 322 1.679153 CAACACGGCTACCCTTTTTGT 59.321 47.619 0.00 0.00 0.00 2.83
322 323 1.601914 GCAACACGGCTACCCTTTTTG 60.602 52.381 0.00 0.00 0.00 2.44
323 324 0.671796 GCAACACGGCTACCCTTTTT 59.328 50.000 0.00 0.00 0.00 1.94
324 325 1.176619 GGCAACACGGCTACCCTTTT 61.177 55.000 0.00 0.00 37.17 2.27
325 326 1.602605 GGCAACACGGCTACCCTTT 60.603 57.895 0.00 0.00 37.17 3.11
326 327 2.033602 GGCAACACGGCTACCCTT 59.966 61.111 0.00 0.00 37.17 3.95
327 328 3.246112 TGGCAACACGGCTACCCT 61.246 61.111 0.00 0.00 46.17 4.34
338 339 5.065090 GGGATTTTCTGCATTTTATGGCAAC 59.935 40.000 0.00 0.00 39.93 4.17
339 340 5.184711 GGGATTTTCTGCATTTTATGGCAA 58.815 37.500 0.00 0.00 39.93 4.52
340 341 4.224594 TGGGATTTTCTGCATTTTATGGCA 59.775 37.500 0.00 0.00 38.52 4.92
341 342 4.571984 GTGGGATTTTCTGCATTTTATGGC 59.428 41.667 0.00 0.00 0.00 4.40
342 343 5.732633 TGTGGGATTTTCTGCATTTTATGG 58.267 37.500 0.00 0.00 0.00 2.74
343 344 7.270047 AGATGTGGGATTTTCTGCATTTTATG 58.730 34.615 0.00 0.00 0.00 1.90
344 345 7.427989 AGATGTGGGATTTTCTGCATTTTAT 57.572 32.000 0.00 0.00 0.00 1.40
345 346 6.855763 AGATGTGGGATTTTCTGCATTTTA 57.144 33.333 0.00 0.00 0.00 1.52
346 347 5.750352 AGATGTGGGATTTTCTGCATTTT 57.250 34.783 0.00 0.00 0.00 1.82
347 348 5.163622 CGTAGATGTGGGATTTTCTGCATTT 60.164 40.000 0.00 0.00 0.00 2.32
348 349 4.336433 CGTAGATGTGGGATTTTCTGCATT 59.664 41.667 0.00 0.00 0.00 3.56
349 350 3.879295 CGTAGATGTGGGATTTTCTGCAT 59.121 43.478 0.00 0.00 0.00 3.96
350 351 3.055458 TCGTAGATGTGGGATTTTCTGCA 60.055 43.478 0.00 0.00 0.00 4.41
351 352 3.531538 TCGTAGATGTGGGATTTTCTGC 58.468 45.455 0.00 0.00 0.00 4.26
352 353 4.024556 GCATCGTAGATGTGGGATTTTCTG 60.025 45.833 11.12 0.00 45.12 3.02
353 354 4.130118 GCATCGTAGATGTGGGATTTTCT 58.870 43.478 11.12 0.00 45.12 2.52
354 355 3.876914 TGCATCGTAGATGTGGGATTTTC 59.123 43.478 11.12 0.00 45.12 2.29
355 356 3.884895 TGCATCGTAGATGTGGGATTTT 58.115 40.909 11.12 0.00 45.12 1.82
356 357 3.558931 TGCATCGTAGATGTGGGATTT 57.441 42.857 11.12 0.00 45.12 2.17
357 358 3.558931 TTGCATCGTAGATGTGGGATT 57.441 42.857 11.12 0.00 45.12 3.01
358 359 3.558931 TTTGCATCGTAGATGTGGGAT 57.441 42.857 11.12 0.00 45.12 3.85
359 360 3.342377 TTTTGCATCGTAGATGTGGGA 57.658 42.857 11.12 0.00 45.12 4.37
360 361 3.190327 TGTTTTTGCATCGTAGATGTGGG 59.810 43.478 11.12 0.00 45.12 4.61
361 362 4.418013 TGTTTTTGCATCGTAGATGTGG 57.582 40.909 11.12 0.00 45.12 4.17
362 363 7.750458 ACTTAATGTTTTTGCATCGTAGATGTG 59.250 33.333 11.12 0.00 45.12 3.21
363 364 7.816640 ACTTAATGTTTTTGCATCGTAGATGT 58.183 30.769 11.12 0.00 45.12 3.06
364 365 9.425893 CTACTTAATGTTTTTGCATCGTAGATG 57.574 33.333 5.71 5.71 45.12 2.90
365 366 9.378551 TCTACTTAATGTTTTTGCATCGTAGAT 57.621 29.630 0.00 0.00 45.12 1.98
366 367 8.766000 TCTACTTAATGTTTTTGCATCGTAGA 57.234 30.769 0.00 0.00 45.75 2.59
367 368 9.262472 GTTCTACTTAATGTTTTTGCATCGTAG 57.738 33.333 0.00 0.00 32.09 3.51
368 369 8.775527 TGTTCTACTTAATGTTTTTGCATCGTA 58.224 29.630 0.00 0.00 0.00 3.43
369 370 7.644490 TGTTCTACTTAATGTTTTTGCATCGT 58.356 30.769 0.00 0.00 0.00 3.73
370 371 8.577939 CATGTTCTACTTAATGTTTTTGCATCG 58.422 33.333 0.00 0.00 0.00 3.84
371 372 9.624697 TCATGTTCTACTTAATGTTTTTGCATC 57.375 29.630 0.00 0.00 0.00 3.91
373 374 9.409312 CATCATGTTCTACTTAATGTTTTTGCA 57.591 29.630 0.00 0.00 0.00 4.08
374 375 8.375465 GCATCATGTTCTACTTAATGTTTTTGC 58.625 33.333 0.00 0.00 0.00 3.68
375 376 9.409312 TGCATCATGTTCTACTTAATGTTTTTG 57.591 29.630 0.00 0.00 0.00 2.44
376 377 9.979578 TTGCATCATGTTCTACTTAATGTTTTT 57.020 25.926 0.00 0.00 0.00 1.94
382 383 8.638685 GCATTTTGCATCATGTTCTACTTAAT 57.361 30.769 7.31 0.00 44.26 1.40
399 400 3.015934 TGTGTGATGAGTGCATTTTGC 57.984 42.857 0.00 0.00 45.29 3.68
414 416 7.064609 ACTGTCGGAACAATAGAATAATGTGTG 59.935 37.037 0.00 0.00 34.24 3.82
416 418 7.401860 CACTGTCGGAACAATAGAATAATGTG 58.598 38.462 0.00 0.00 34.24 3.21
418 420 6.511767 GCCACTGTCGGAACAATAGAATAATG 60.512 42.308 1.23 0.00 34.24 1.90
436 438 1.346395 TGTAGAATTCCGTGCCACTGT 59.654 47.619 0.65 0.00 0.00 3.55
444 446 0.981183 TGCCACCTGTAGAATTCCGT 59.019 50.000 0.65 0.00 0.00 4.69
446 448 3.073274 AGTTGCCACCTGTAGAATTCC 57.927 47.619 0.65 0.00 0.00 3.01
450 452 3.211045 GTCAAAGTTGCCACCTGTAGAA 58.789 45.455 0.00 0.00 0.00 2.10
455 457 1.008538 GCGTCAAAGTTGCCACCTG 60.009 57.895 0.00 0.00 0.00 4.00
459 461 1.163420 ATGACGCGTCAAAGTTGCCA 61.163 50.000 41.74 19.35 43.58 4.92
472 474 0.247655 CACGCACATACCAATGACGC 60.248 55.000 0.00 0.00 38.72 5.19
479 481 1.188871 TCTCCACCACGCACATACCA 61.189 55.000 0.00 0.00 0.00 3.25
488 490 1.680522 CCTCCATCCTCTCCACCACG 61.681 65.000 0.00 0.00 0.00 4.94
506 508 6.909550 ATACTATCACATCCTTGAGACTCC 57.090 41.667 0.00 0.00 0.00 3.85
525 527 9.830975 AAACCACTGAAGCAAAATAAAAATACT 57.169 25.926 0.00 0.00 0.00 2.12
547 549 6.664515 TCGAACATCACATTACAAGAAAACC 58.335 36.000 0.00 0.00 0.00 3.27
578 581 6.132658 TCTGAATGAGCCAAGACTCTATACT 58.867 40.000 0.00 0.00 37.58 2.12
580 583 7.423844 TTTCTGAATGAGCCAAGACTCTATA 57.576 36.000 0.00 0.00 37.58 1.31
581 584 5.946942 TTCTGAATGAGCCAAGACTCTAT 57.053 39.130 0.00 0.00 37.58 1.98
604 607 4.870123 TTGCAAGTACATGGCATCTTTT 57.130 36.364 0.00 0.00 37.39 2.27
609 612 3.069300 TGTGTTTTGCAAGTACATGGCAT 59.931 39.130 16.41 0.00 37.39 4.40
612 615 5.976586 CAAATGTGTTTTGCAAGTACATGG 58.023 37.500 19.37 13.65 38.42 3.66
647 650 3.532977 CGTCAAATTTATTCGACGTGTGC 59.467 43.478 16.44 0.00 44.61 4.57
659 662 9.706691 AGAATTCTACAAGAGACGTCAAATTTA 57.293 29.630 19.50 2.35 32.31 1.40
661 664 7.872993 TGAGAATTCTACAAGAGACGTCAAATT 59.127 33.333 19.50 6.21 32.31 1.82
666 669 7.639162 TTTTGAGAATTCTACAAGAGACGTC 57.361 36.000 8.25 7.70 32.31 4.34
680 689 6.243900 TCTCTCCTTCTGCATTTTGAGAATT 58.756 36.000 7.34 0.00 0.00 2.17
693 702 8.327941 TCAATTATGTGTTTTCTCTCCTTCTG 57.672 34.615 0.00 0.00 0.00 3.02
694 703 8.924511 TTCAATTATGTGTTTTCTCTCCTTCT 57.075 30.769 0.00 0.00 0.00 2.85
695 704 8.787852 ACTTCAATTATGTGTTTTCTCTCCTTC 58.212 33.333 0.00 0.00 0.00 3.46
696 705 8.571336 CACTTCAATTATGTGTTTTCTCTCCTT 58.429 33.333 0.00 0.00 0.00 3.36
727 736 5.983333 AATGATGTAGGATTTGAGAGGGT 57.017 39.130 0.00 0.00 0.00 4.34
825 840 1.823041 GTACGAGTCGGAGAGGGGG 60.823 68.421 18.30 0.00 36.95 5.40
847 886 7.173390 GGATCATCTATTTTAAAACGGAGGGAG 59.827 40.741 1.97 0.00 0.00 4.30
848 887 6.996282 GGATCATCTATTTTAAAACGGAGGGA 59.004 38.462 1.97 7.05 0.00 4.20
849 888 6.770785 TGGATCATCTATTTTAAAACGGAGGG 59.229 38.462 1.97 2.46 0.00 4.30
850 889 7.801716 TGGATCATCTATTTTAAAACGGAGG 57.198 36.000 1.97 6.55 0.00 4.30
851 890 8.893727 AGTTGGATCATCTATTTTAAAACGGAG 58.106 33.333 1.97 1.74 0.00 4.63
852 891 8.801882 AGTTGGATCATCTATTTTAAAACGGA 57.198 30.769 1.97 5.09 0.00 4.69
853 892 9.855021 AAAGTTGGATCATCTATTTTAAAACGG 57.145 29.630 1.97 0.00 0.00 4.44
895 934 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
896 935 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
897 936 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
898 937 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
899 938 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
900 939 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
901 940 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
902 941 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
903 942 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
904 943 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
905 944 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
906 945 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
907 946 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
908 947 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
909 948 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
910 949 4.355549 TCTACTCCCTCCGTTCCAAAATA 58.644 43.478 0.00 0.00 0.00 1.40
911 950 3.178865 TCTACTCCCTCCGTTCCAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
912 951 2.612000 TCTACTCCCTCCGTTCCAAAA 58.388 47.619 0.00 0.00 0.00 2.44
913 952 2.314071 TCTACTCCCTCCGTTCCAAA 57.686 50.000 0.00 0.00 0.00 3.28
914 953 2.544844 ATCTACTCCCTCCGTTCCAA 57.455 50.000 0.00 0.00 0.00 3.53
915 954 3.117246 ACATATCTACTCCCTCCGTTCCA 60.117 47.826 0.00 0.00 0.00 3.53
916 955 3.498334 ACATATCTACTCCCTCCGTTCC 58.502 50.000 0.00 0.00 0.00 3.62
917 956 5.302313 AGAAACATATCTACTCCCTCCGTTC 59.698 44.000 0.00 0.00 0.00 3.95
918 957 5.209659 AGAAACATATCTACTCCCTCCGTT 58.790 41.667 0.00 0.00 0.00 4.44
919 958 4.805744 AGAAACATATCTACTCCCTCCGT 58.194 43.478 0.00 0.00 0.00 4.69
920 959 5.793030 AAGAAACATATCTACTCCCTCCG 57.207 43.478 0.00 0.00 0.00 4.63
921 960 6.292150 CCAAAGAAACATATCTACTCCCTCC 58.708 44.000 0.00 0.00 0.00 4.30
922 961 6.126739 ACCCAAAGAAACATATCTACTCCCTC 60.127 42.308 0.00 0.00 0.00 4.30
923 962 5.731678 ACCCAAAGAAACATATCTACTCCCT 59.268 40.000 0.00 0.00 0.00 4.20
924 963 5.823045 CACCCAAAGAAACATATCTACTCCC 59.177 44.000 0.00 0.00 0.00 4.30
925 964 5.823045 CCACCCAAAGAAACATATCTACTCC 59.177 44.000 0.00 0.00 0.00 3.85
926 965 6.415573 ACCACCCAAAGAAACATATCTACTC 58.584 40.000 0.00 0.00 0.00 2.59
927 966 6.388619 ACCACCCAAAGAAACATATCTACT 57.611 37.500 0.00 0.00 0.00 2.57
928 967 6.183360 CGAACCACCCAAAGAAACATATCTAC 60.183 42.308 0.00 0.00 0.00 2.59
929 968 5.878116 CGAACCACCCAAAGAAACATATCTA 59.122 40.000 0.00 0.00 0.00 1.98
930 969 4.700213 CGAACCACCCAAAGAAACATATCT 59.300 41.667 0.00 0.00 0.00 1.98
970 1009 0.459759 TGCGTGACGTTGTGGTTGTA 60.460 50.000 6.91 0.00 0.00 2.41
975 1014 0.586319 ATCTTTGCGTGACGTTGTGG 59.414 50.000 6.91 0.00 0.00 4.17
1038 1080 1.330655 TGAGGAGATCGGTTGGGAGC 61.331 60.000 0.00 0.00 0.00 4.70
1369 1417 2.733218 CGTGCGCGAGGTGAAGAA 60.733 61.111 16.08 0.00 41.33 2.52
1535 1589 4.379243 CGGACAGCACCGCCTTCT 62.379 66.667 4.29 0.00 46.20 2.85
1585 1642 0.674581 TAGTGGACGACCGTGACGAT 60.675 55.000 6.54 0.00 39.42 3.73
1700 1760 2.354773 CGGCGTAGATCCTTCCGC 60.355 66.667 0.00 7.20 45.05 5.54
1704 1764 1.437986 GCACTCGGCGTAGATCCTT 59.562 57.895 6.85 0.00 0.00 3.36
1807 1873 0.906066 TATAGCAACACCGCCTTCCA 59.094 50.000 0.00 0.00 0.00 3.53
1819 1885 2.587753 GCGCGGGCAGTATAGCAA 60.588 61.111 20.76 0.00 39.62 3.91
2054 2165 2.920912 TCACGCCGGGGAAGTTCT 60.921 61.111 27.23 0.00 0.00 3.01
2284 3954 4.216411 TCTGAAGGCCTGGTTACATAAC 57.784 45.455 5.69 0.00 35.50 1.89
2285 3955 4.919774 TTCTGAAGGCCTGGTTACATAA 57.080 40.909 5.69 0.00 0.00 1.90
2308 5583 3.491619 CGCACATACTTCCTGCTATCTGT 60.492 47.826 0.00 0.00 0.00 3.41
2340 5618 6.821160 TGAGATGAAACAGCAACCGATTAATA 59.179 34.615 0.00 0.00 0.00 0.98
2342 5620 5.000591 TGAGATGAAACAGCAACCGATTAA 58.999 37.500 0.00 0.00 0.00 1.40
2383 5663 7.264221 ACAATTTTGATCAGCACAAGTGTTTA 58.736 30.769 0.00 0.00 41.14 2.01
2439 5719 4.503741 TTTCAGGAACAATGCAGCTAAC 57.496 40.909 0.00 0.00 0.00 2.34
2444 5724 3.430895 GCACATTTTCAGGAACAATGCAG 59.569 43.478 0.00 9.13 32.08 4.41
2457 5737 0.675633 AGGTGGTGCTGCACATTTTC 59.324 50.000 31.35 15.77 35.86 2.29
2458 5738 0.390124 CAGGTGGTGCTGCACATTTT 59.610 50.000 31.35 13.19 35.86 1.82
2459 5739 0.467844 TCAGGTGGTGCTGCACATTT 60.468 50.000 31.35 12.84 35.86 2.32
2522 5985 3.767131 GTCTAGCATCTCTCCTATTCCCC 59.233 52.174 0.00 0.00 0.00 4.81
2523 5986 3.442273 CGTCTAGCATCTCTCCTATTCCC 59.558 52.174 0.00 0.00 0.00 3.97
2524 5987 4.695217 CGTCTAGCATCTCTCCTATTCC 57.305 50.000 0.00 0.00 0.00 3.01
2539 6002 0.314302 CTATTCCCCCGTGCGTCTAG 59.686 60.000 0.00 0.00 0.00 2.43
2540 6003 1.111116 CCTATTCCCCCGTGCGTCTA 61.111 60.000 0.00 0.00 0.00 2.59
2541 6004 2.432300 CCTATTCCCCCGTGCGTCT 61.432 63.158 0.00 0.00 0.00 4.18
2542 6005 2.108362 CCTATTCCCCCGTGCGTC 59.892 66.667 0.00 0.00 0.00 5.19
2543 6006 3.476419 CCCTATTCCCCCGTGCGT 61.476 66.667 0.00 0.00 0.00 5.24
2544 6007 4.250305 CCCCTATTCCCCCGTGCG 62.250 72.222 0.00 0.00 0.00 5.34
2545 6008 0.838987 TATCCCCTATTCCCCCGTGC 60.839 60.000 0.00 0.00 0.00 5.34
2546 6009 0.981943 GTATCCCCTATTCCCCCGTG 59.018 60.000 0.00 0.00 0.00 4.94
2547 6010 0.569204 TGTATCCCCTATTCCCCCGT 59.431 55.000 0.00 0.00 0.00 5.28
2548 6011 1.966845 ATGTATCCCCTATTCCCCCG 58.033 55.000 0.00 0.00 0.00 5.73
2549 6012 2.993863 ACAATGTATCCCCTATTCCCCC 59.006 50.000 0.00 0.00 0.00 5.40
2619 6082 5.293569 GTCGGAGGAACCAATTTATGTACAG 59.706 44.000 0.33 0.00 38.90 2.74
2633 6096 1.810030 GGATGCGTGTCGGAGGAAC 60.810 63.158 0.00 0.00 0.00 3.62
2796 6259 7.148086 CCGATCCATTGTAGGAGAAAATTTTCA 60.148 37.037 28.00 9.91 41.90 2.69
2797 6260 7.196331 CCGATCCATTGTAGGAGAAAATTTTC 58.804 38.462 21.00 21.00 41.90 2.29
2803 6266 3.112263 ACCCGATCCATTGTAGGAGAAA 58.888 45.455 0.00 0.00 41.90 2.52
2814 6284 2.288642 AATGCTGCCACCCGATCCAT 62.289 55.000 0.00 0.00 0.00 3.41
2843 6313 3.324846 TCATCTGGTACTCTTTGCACACT 59.675 43.478 0.00 0.00 0.00 3.55
3044 9097 5.591099 CAACTTGCCAACTCTATTGTTTGT 58.409 37.500 0.00 0.00 0.00 2.83
3115 9665 6.538742 GTGAACAATAAGCCTATCTAGTGCAA 59.461 38.462 0.00 0.00 0.00 4.08
3194 9744 5.334414 GGATGCAACAATTAGGCTATTCTCG 60.334 44.000 0.00 0.00 0.00 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.