Multiple sequence alignment - TraesCS2D01G427100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G427100 chr2D 100.000 4499 0 0 1 4499 539258320 539262818 0.000000e+00 8309.0
1 TraesCS2D01G427100 chr2A 92.032 3928 248 36 605 4486 682551438 682555346 0.000000e+00 5459.0
2 TraesCS2D01G427100 chr2A 83.752 597 81 10 3736 4322 136973825 136973235 6.580000e-153 551.0
3 TraesCS2D01G427100 chr2A 92.763 152 11 0 455 606 682551118 682551269 2.110000e-53 220.0
4 TraesCS2D01G427100 chr2A 80.682 176 29 5 284 456 735780921 735781094 1.020000e-26 132.0
5 TraesCS2D01G427100 chr2B 93.106 3220 181 21 503 3702 643181421 643184619 0.000000e+00 4678.0
6 TraesCS2D01G427100 chr2B 87.793 811 71 12 3700 4486 643184733 643185539 0.000000e+00 924.0
7 TraesCS2D01G427100 chr2B 86.598 97 13 0 341 437 11338919 11339015 1.710000e-19 108.0
8 TraesCS2D01G427100 chr3A 93.668 458 28 1 1 457 547411452 547410995 0.000000e+00 684.0
9 TraesCS2D01G427100 chr6D 82.578 706 94 16 3736 4422 81040343 81039648 3.000000e-166 595.0
10 TraesCS2D01G427100 chr3D 82.476 719 81 19 3736 4422 421765866 421766571 5.010000e-164 588.0
11 TraesCS2D01G427100 chr5A 89.241 474 31 9 1 456 219690691 219691162 3.900000e-160 575.0
12 TraesCS2D01G427100 chr4A 82.919 603 81 14 3736 4322 35188697 35188101 1.430000e-144 523.0
13 TraesCS2D01G427100 chr7B 86.408 206 22 6 1 202 557434558 557434761 2.110000e-53 220.0
14 TraesCS2D01G427100 chr7D 82.011 189 26 8 275 459 276127753 276127937 2.170000e-33 154.0
15 TraesCS2D01G427100 chr5D 89.076 119 13 0 341 459 551421800 551421918 1.010000e-31 148.0
16 TraesCS2D01G427100 chr5D 80.108 186 29 8 275 456 236492992 236493173 1.020000e-26 132.0
17 TraesCS2D01G427100 chr5D 83.740 123 10 9 341 458 37122136 37122253 1.710000e-19 108.0
18 TraesCS2D01G427100 chr6A 84.746 118 14 4 341 456 609268351 609268466 1.020000e-21 115.0
19 TraesCS2D01G427100 chr1D 84.956 113 15 2 344 455 195170336 195170225 3.680000e-21 113.0
20 TraesCS2D01G427100 chr7A 96.078 51 2 0 77 127 250691977 250691927 2.880000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G427100 chr2D 539258320 539262818 4498 False 8309.0 8309 100.0000 1 4499 1 chr2D.!!$F1 4498
1 TraesCS2D01G427100 chr2A 682551118 682555346 4228 False 2839.5 5459 92.3975 455 4486 2 chr2A.!!$F2 4031
2 TraesCS2D01G427100 chr2A 136973235 136973825 590 True 551.0 551 83.7520 3736 4322 1 chr2A.!!$R1 586
3 TraesCS2D01G427100 chr2B 643181421 643185539 4118 False 2801.0 4678 90.4495 503 4486 2 chr2B.!!$F2 3983
4 TraesCS2D01G427100 chr6D 81039648 81040343 695 True 595.0 595 82.5780 3736 4422 1 chr6D.!!$R1 686
5 TraesCS2D01G427100 chr3D 421765866 421766571 705 False 588.0 588 82.4760 3736 4422 1 chr3D.!!$F1 686
6 TraesCS2D01G427100 chr4A 35188101 35188697 596 True 523.0 523 82.9190 3736 4322 1 chr4A.!!$R1 586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.030638 GAATGCTTGTGTGCGTGGTT 59.969 50.0 0.00 0.0 35.36 3.67 F
198 199 0.107643 TGAACATGTTGCTGGTCCGA 59.892 50.0 17.58 0.0 31.55 4.55 F
338 339 0.179084 ATACGCCTGCATACGCACTT 60.179 50.0 8.28 0.0 45.36 3.16 F
346 347 0.179225 GCATACGCACTTTGTGACCG 60.179 55.0 1.52 0.0 35.23 4.79 F
925 1106 0.193574 TTGTCCCTCTCCCTCAGGTT 59.806 55.0 0.00 0.0 0.00 3.50 F
2418 2599 0.316204 CACCACCGTCGAGTAAAGGT 59.684 55.0 0.00 0.0 37.49 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1096 1277 0.107831 CAGTGGGAAGGAACGTTGGA 59.892 55.0 5.00 0.00 0.00 3.53 R
1863 2044 0.260816 AAGATGGCCATGGCAGTGAT 59.739 50.0 36.56 21.89 42.43 3.06 R
1866 2047 0.395311 CTGAAGATGGCCATGGCAGT 60.395 55.0 36.56 24.54 42.43 4.40 R
1923 2104 0.733150 GACCGTTCCAGCCATAAAGC 59.267 55.0 0.00 0.00 0.00 3.51 R
2610 2791 0.039618 GACCAAATCCTCCTTGCCCA 59.960 55.0 0.00 0.00 0.00 5.36 R
4280 4638 0.875059 GTCTTTGGTTTGCTCCCTCG 59.125 55.0 0.00 0.00 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.335400 TTTGGCTCACCCTCAAAAATTC 57.665 40.909 0.00 0.00 33.59 2.17
22 23 3.243359 TGGCTCACCCTCAAAAATTCT 57.757 42.857 0.00 0.00 33.59 2.40
23 24 3.575805 TGGCTCACCCTCAAAAATTCTT 58.424 40.909 0.00 0.00 33.59 2.52
24 25 3.966665 TGGCTCACCCTCAAAAATTCTTT 59.033 39.130 0.00 0.00 33.59 2.52
25 26 4.039124 TGGCTCACCCTCAAAAATTCTTTC 59.961 41.667 0.00 0.00 33.59 2.62
26 27 4.039124 GGCTCACCCTCAAAAATTCTTTCA 59.961 41.667 0.00 0.00 0.00 2.69
27 28 5.225642 GCTCACCCTCAAAAATTCTTTCAG 58.774 41.667 0.00 0.00 0.00 3.02
28 29 5.010012 GCTCACCCTCAAAAATTCTTTCAGA 59.990 40.000 0.00 0.00 0.00 3.27
29 30 6.294955 GCTCACCCTCAAAAATTCTTTCAGAT 60.295 38.462 0.00 0.00 0.00 2.90
30 31 7.094205 GCTCACCCTCAAAAATTCTTTCAGATA 60.094 37.037 0.00 0.00 0.00 1.98
31 32 8.704849 TCACCCTCAAAAATTCTTTCAGATAA 57.295 30.769 0.00 0.00 0.00 1.75
32 33 9.142014 TCACCCTCAAAAATTCTTTCAGATAAA 57.858 29.630 0.00 0.00 0.00 1.40
33 34 9.933723 CACCCTCAAAAATTCTTTCAGATAAAT 57.066 29.630 0.00 0.00 0.00 1.40
70 71 9.834628 TTGAATTCGAGTAATTTTATGGTTGTC 57.165 29.630 0.04 0.00 37.93 3.18
71 72 8.455682 TGAATTCGAGTAATTTTATGGTTGTCC 58.544 33.333 0.04 0.00 37.93 4.02
72 73 6.746745 TTCGAGTAATTTTATGGTTGTCCC 57.253 37.500 0.00 0.00 0.00 4.46
73 74 4.871557 TCGAGTAATTTTATGGTTGTCCCG 59.128 41.667 0.00 0.00 35.15 5.14
74 75 4.495184 CGAGTAATTTTATGGTTGTCCCGC 60.495 45.833 0.00 0.00 35.15 6.13
75 76 3.697542 AGTAATTTTATGGTTGTCCCGCC 59.302 43.478 0.00 0.00 35.15 6.13
76 77 2.223803 ATTTTATGGTTGTCCCGCCA 57.776 45.000 0.00 0.00 39.33 5.69
77 78 1.996798 TTTTATGGTTGTCCCGCCAA 58.003 45.000 0.00 0.00 38.38 4.52
78 79 1.996798 TTTATGGTTGTCCCGCCAAA 58.003 45.000 0.00 0.00 38.38 3.28
79 80 1.996798 TTATGGTTGTCCCGCCAAAA 58.003 45.000 0.00 0.00 38.38 2.44
80 81 1.996798 TATGGTTGTCCCGCCAAAAA 58.003 45.000 0.00 0.00 38.38 1.94
81 82 1.347062 ATGGTTGTCCCGCCAAAAAT 58.653 45.000 0.00 0.00 38.38 1.82
82 83 1.996798 TGGTTGTCCCGCCAAAAATA 58.003 45.000 0.00 0.00 35.15 1.40
83 84 2.530701 TGGTTGTCCCGCCAAAAATAT 58.469 42.857 0.00 0.00 35.15 1.28
84 85 3.698289 TGGTTGTCCCGCCAAAAATATA 58.302 40.909 0.00 0.00 35.15 0.86
85 86 4.282496 TGGTTGTCCCGCCAAAAATATAT 58.718 39.130 0.00 0.00 35.15 0.86
86 87 4.712337 TGGTTGTCCCGCCAAAAATATATT 59.288 37.500 0.00 0.00 35.15 1.28
87 88 5.892119 TGGTTGTCCCGCCAAAAATATATTA 59.108 36.000 0.00 0.00 35.15 0.98
88 89 6.551601 TGGTTGTCCCGCCAAAAATATATTAT 59.448 34.615 0.00 0.00 35.15 1.28
89 90 7.070074 TGGTTGTCCCGCCAAAAATATATTATT 59.930 33.333 0.00 0.00 35.15 1.40
90 91 7.929245 GGTTGTCCCGCCAAAAATATATTATTT 59.071 33.333 0.00 0.01 0.00 1.40
91 92 8.760569 GTTGTCCCGCCAAAAATATATTATTTG 58.239 33.333 17.33 17.33 34.60 2.32
92 93 8.012957 TGTCCCGCCAAAAATATATTATTTGT 57.987 30.769 19.94 0.00 33.31 2.83
93 94 8.478877 TGTCCCGCCAAAAATATATTATTTGTT 58.521 29.630 19.94 4.05 33.31 2.83
94 95 8.760569 GTCCCGCCAAAAATATATTATTTGTTG 58.239 33.333 19.94 15.11 33.31 3.33
95 96 7.928706 TCCCGCCAAAAATATATTATTTGTTGG 59.071 33.333 19.94 19.32 35.18 3.77
96 97 7.172361 CCCGCCAAAAATATATTATTTGTTGGG 59.828 37.037 23.46 23.46 38.79 4.12
97 98 7.713073 CCGCCAAAAATATATTATTTGTTGGGT 59.287 33.333 19.94 0.00 34.10 4.51
98 99 9.103861 CGCCAAAAATATATTATTTGTTGGGTT 57.896 29.630 19.94 1.44 34.10 4.11
120 121 9.787435 GGGTTGACCAATATAATACAGTATTCA 57.213 33.333 9.20 0.00 39.85 2.57
143 144 9.973661 TTCATTTCATTATTAGACTGGAAAGGA 57.026 29.630 0.00 0.00 34.52 3.36
144 145 9.973661 TCATTTCATTATTAGACTGGAAAGGAA 57.026 29.630 0.00 0.00 33.76 3.36
147 148 7.807977 TCATTATTAGACTGGAAAGGAATGC 57.192 36.000 0.00 0.00 0.00 3.56
148 149 7.577303 TCATTATTAGACTGGAAAGGAATGCT 58.423 34.615 0.00 0.00 0.00 3.79
149 150 8.055181 TCATTATTAGACTGGAAAGGAATGCTT 58.945 33.333 0.00 0.00 0.00 3.91
150 151 7.630242 TTATTAGACTGGAAAGGAATGCTTG 57.370 36.000 0.00 0.00 0.00 4.01
151 152 3.515602 AGACTGGAAAGGAATGCTTGT 57.484 42.857 0.00 0.00 0.00 3.16
152 153 3.152341 AGACTGGAAAGGAATGCTTGTG 58.848 45.455 0.00 0.00 0.00 3.33
153 154 2.887152 GACTGGAAAGGAATGCTTGTGT 59.113 45.455 0.00 0.00 0.00 3.72
154 155 2.624838 ACTGGAAAGGAATGCTTGTGTG 59.375 45.455 0.00 0.00 0.00 3.82
155 156 1.340889 TGGAAAGGAATGCTTGTGTGC 59.659 47.619 0.00 0.00 0.00 4.57
156 157 1.666888 GGAAAGGAATGCTTGTGTGCG 60.667 52.381 0.00 0.00 35.36 5.34
157 158 1.001378 GAAAGGAATGCTTGTGTGCGT 60.001 47.619 0.00 0.00 35.36 5.24
158 159 0.311790 AAGGAATGCTTGTGTGCGTG 59.688 50.000 0.00 0.00 35.36 5.34
159 160 1.081242 GGAATGCTTGTGTGCGTGG 60.081 57.895 0.00 0.00 35.36 4.94
160 161 1.654220 GAATGCTTGTGTGCGTGGT 59.346 52.632 0.00 0.00 35.36 4.16
161 162 0.030638 GAATGCTTGTGTGCGTGGTT 59.969 50.000 0.00 0.00 35.36 3.67
162 163 1.265635 GAATGCTTGTGTGCGTGGTTA 59.734 47.619 0.00 0.00 35.36 2.85
163 164 0.874390 ATGCTTGTGTGCGTGGTTAG 59.126 50.000 0.00 0.00 35.36 2.34
164 165 1.082104 GCTTGTGTGCGTGGTTAGC 60.082 57.895 0.00 0.00 0.00 3.09
165 166 1.507141 GCTTGTGTGCGTGGTTAGCT 61.507 55.000 0.00 0.00 35.28 3.32
166 167 0.512952 CTTGTGTGCGTGGTTAGCTC 59.487 55.000 0.00 0.00 35.28 4.09
167 168 1.218875 TTGTGTGCGTGGTTAGCTCG 61.219 55.000 0.00 1.40 35.28 5.03
171 172 3.838795 GCGTGGTTAGCTCGCGTG 61.839 66.667 14.54 4.44 40.51 5.34
172 173 2.126618 CGTGGTTAGCTCGCGTGA 60.127 61.111 13.13 0.00 33.99 4.35
173 174 2.434134 CGTGGTTAGCTCGCGTGAC 61.434 63.158 13.13 3.45 33.99 3.67
174 175 1.372499 GTGGTTAGCTCGCGTGACA 60.372 57.895 13.13 0.00 0.00 3.58
175 176 0.942410 GTGGTTAGCTCGCGTGACAA 60.942 55.000 13.13 1.56 0.00 3.18
176 177 0.666274 TGGTTAGCTCGCGTGACAAG 60.666 55.000 13.13 0.00 0.00 3.16
177 178 0.666577 GGTTAGCTCGCGTGACAAGT 60.667 55.000 13.13 0.00 0.00 3.16
178 179 1.137513 GTTAGCTCGCGTGACAAGTT 58.862 50.000 13.13 0.00 0.00 2.66
179 180 1.525619 GTTAGCTCGCGTGACAAGTTT 59.474 47.619 13.13 0.00 0.00 2.66
180 181 1.136690 TAGCTCGCGTGACAAGTTTG 58.863 50.000 13.13 0.00 0.00 2.93
181 182 0.529773 AGCTCGCGTGACAAGTTTGA 60.530 50.000 13.13 0.00 0.00 2.69
182 183 0.303493 GCTCGCGTGACAAGTTTGAA 59.697 50.000 13.13 0.00 0.00 2.69
183 184 1.915965 GCTCGCGTGACAAGTTTGAAC 60.916 52.381 13.13 0.00 0.00 3.18
184 185 1.326245 CTCGCGTGACAAGTTTGAACA 59.674 47.619 5.77 0.00 0.00 3.18
185 186 1.937223 TCGCGTGACAAGTTTGAACAT 59.063 42.857 5.77 0.00 0.00 2.71
186 187 2.036217 CGCGTGACAAGTTTGAACATG 58.964 47.619 0.00 0.00 34.08 3.21
187 188 2.538737 CGCGTGACAAGTTTGAACATGT 60.539 45.455 0.00 4.60 42.78 3.21
188 189 3.434637 GCGTGACAAGTTTGAACATGTT 58.565 40.909 11.78 11.78 40.49 2.71
189 190 3.240401 GCGTGACAAGTTTGAACATGTTG 59.760 43.478 17.58 2.51 40.49 3.33
190 191 3.240401 CGTGACAAGTTTGAACATGTTGC 59.760 43.478 17.58 8.35 40.49 4.17
191 192 4.423732 GTGACAAGTTTGAACATGTTGCT 58.576 39.130 17.58 5.82 40.49 3.91
192 193 4.266029 GTGACAAGTTTGAACATGTTGCTG 59.734 41.667 17.58 6.26 40.49 4.41
193 194 3.784338 ACAAGTTTGAACATGTTGCTGG 58.216 40.909 17.58 8.58 37.55 4.85
194 195 3.195396 ACAAGTTTGAACATGTTGCTGGT 59.805 39.130 17.58 9.18 37.55 4.00
195 196 3.715628 AGTTTGAACATGTTGCTGGTC 57.284 42.857 17.58 0.26 33.28 4.02
196 197 2.362077 AGTTTGAACATGTTGCTGGTCC 59.638 45.455 17.58 0.00 31.55 4.46
197 198 0.950836 TTGAACATGTTGCTGGTCCG 59.049 50.000 17.58 0.00 31.55 4.79
198 199 0.107643 TGAACATGTTGCTGGTCCGA 59.892 50.000 17.58 0.00 31.55 4.55
199 200 1.271325 TGAACATGTTGCTGGTCCGAT 60.271 47.619 17.58 0.00 31.55 4.18
200 201 2.027653 TGAACATGTTGCTGGTCCGATA 60.028 45.455 17.58 0.00 31.55 2.92
201 202 2.024176 ACATGTTGCTGGTCCGATAC 57.976 50.000 0.00 0.00 0.00 2.24
211 212 2.510768 GGTCCGATACCTGACATCAC 57.489 55.000 0.07 0.00 45.75 3.06
212 213 1.269102 GGTCCGATACCTGACATCACG 60.269 57.143 0.07 0.00 45.75 4.35
213 214 1.674441 GTCCGATACCTGACATCACGA 59.326 52.381 0.00 0.00 0.00 4.35
214 215 2.293677 GTCCGATACCTGACATCACGAT 59.706 50.000 0.00 0.00 0.00 3.73
215 216 2.956333 TCCGATACCTGACATCACGATT 59.044 45.455 0.00 0.00 0.00 3.34
216 217 4.023450 GTCCGATACCTGACATCACGATTA 60.023 45.833 0.00 0.00 0.00 1.75
217 218 4.765339 TCCGATACCTGACATCACGATTAT 59.235 41.667 0.00 0.00 0.00 1.28
218 219 5.243060 TCCGATACCTGACATCACGATTATT 59.757 40.000 0.00 0.00 0.00 1.40
219 220 5.926542 CCGATACCTGACATCACGATTATTT 59.073 40.000 0.00 0.00 0.00 1.40
220 221 6.423905 CCGATACCTGACATCACGATTATTTT 59.576 38.462 0.00 0.00 0.00 1.82
221 222 7.042051 CCGATACCTGACATCACGATTATTTTT 60.042 37.037 0.00 0.00 0.00 1.94
222 223 7.793888 CGATACCTGACATCACGATTATTTTTG 59.206 37.037 0.00 0.00 0.00 2.44
223 224 8.731275 ATACCTGACATCACGATTATTTTTGA 57.269 30.769 0.00 0.00 0.00 2.69
224 225 7.447374 ACCTGACATCACGATTATTTTTGAA 57.553 32.000 0.00 0.00 0.00 2.69
225 226 8.055279 ACCTGACATCACGATTATTTTTGAAT 57.945 30.769 0.00 0.00 0.00 2.57
226 227 8.184192 ACCTGACATCACGATTATTTTTGAATC 58.816 33.333 0.00 0.00 0.00 2.52
227 228 8.400947 CCTGACATCACGATTATTTTTGAATCT 58.599 33.333 0.00 0.00 32.17 2.40
228 229 9.778993 CTGACATCACGATTATTTTTGAATCTT 57.221 29.630 0.00 0.00 32.17 2.40
234 235 9.128107 TCACGATTATTTTTGAATCTTTTCTGC 57.872 29.630 0.00 0.00 32.17 4.26
235 236 8.914654 CACGATTATTTTTGAATCTTTTCTGCA 58.085 29.630 0.00 0.00 32.17 4.41
236 237 9.474920 ACGATTATTTTTGAATCTTTTCTGCAA 57.525 25.926 0.00 0.00 32.17 4.08
243 244 9.771915 TTTTTGAATCTTTTCTGCAAAAATGTC 57.228 25.926 0.00 6.27 41.03 3.06
244 245 6.752335 TGAATCTTTTCTGCAAAAATGTCG 57.248 33.333 7.08 0.00 30.90 4.35
245 246 6.272318 TGAATCTTTTCTGCAAAAATGTCGT 58.728 32.000 7.08 0.00 30.90 4.34
246 247 6.417635 TGAATCTTTTCTGCAAAAATGTCGTC 59.582 34.615 7.08 1.73 30.90 4.20
247 248 5.242069 TCTTTTCTGCAAAAATGTCGTCA 57.758 34.783 7.08 0.00 30.90 4.35
248 249 5.034152 TCTTTTCTGCAAAAATGTCGTCAC 58.966 37.500 7.08 0.00 30.90 3.67
249 250 4.362932 TTTCTGCAAAAATGTCGTCACA 57.637 36.364 0.00 0.00 36.78 3.58
250 251 3.332761 TCTGCAAAAATGTCGTCACAC 57.667 42.857 0.00 0.00 34.48 3.82
251 252 2.032799 TCTGCAAAAATGTCGTCACACC 59.967 45.455 0.00 0.00 34.48 4.16
252 253 2.020720 TGCAAAAATGTCGTCACACCT 58.979 42.857 0.00 0.00 34.48 4.00
253 254 3.206964 TGCAAAAATGTCGTCACACCTA 58.793 40.909 0.00 0.00 34.48 3.08
254 255 3.249799 TGCAAAAATGTCGTCACACCTAG 59.750 43.478 0.00 0.00 34.48 3.02
255 256 3.810373 CAAAAATGTCGTCACACCTAGC 58.190 45.455 0.00 0.00 34.48 3.42
256 257 1.710013 AAATGTCGTCACACCTAGCG 58.290 50.000 0.00 0.00 34.48 4.26
257 258 0.736325 AATGTCGTCACACCTAGCGC 60.736 55.000 0.00 0.00 34.48 5.92
258 259 2.506438 GTCGTCACACCTAGCGCC 60.506 66.667 2.29 0.00 0.00 6.53
259 260 2.675423 TCGTCACACCTAGCGCCT 60.675 61.111 2.29 0.00 0.00 5.52
260 261 2.202623 CGTCACACCTAGCGCCTC 60.203 66.667 2.29 0.00 0.00 4.70
261 262 2.184579 GTCACACCTAGCGCCTCC 59.815 66.667 2.29 0.00 0.00 4.30
262 263 2.283604 TCACACCTAGCGCCTCCA 60.284 61.111 2.29 0.00 0.00 3.86
263 264 2.125512 CACACCTAGCGCCTCCAC 60.126 66.667 2.29 0.00 0.00 4.02
264 265 2.603473 ACACCTAGCGCCTCCACA 60.603 61.111 2.29 0.00 0.00 4.17
265 266 2.214216 ACACCTAGCGCCTCCACAA 61.214 57.895 2.29 0.00 0.00 3.33
266 267 1.741770 CACCTAGCGCCTCCACAAC 60.742 63.158 2.29 0.00 0.00 3.32
267 268 2.125106 CCTAGCGCCTCCACAACC 60.125 66.667 2.29 0.00 0.00 3.77
268 269 2.125106 CTAGCGCCTCCACAACCC 60.125 66.667 2.29 0.00 0.00 4.11
269 270 2.925706 TAGCGCCTCCACAACCCA 60.926 61.111 2.29 0.00 0.00 4.51
270 271 3.248446 TAGCGCCTCCACAACCCAC 62.248 63.158 2.29 0.00 0.00 4.61
271 272 4.947147 GCGCCTCCACAACCCACA 62.947 66.667 0.00 0.00 0.00 4.17
272 273 2.669569 CGCCTCCACAACCCACAG 60.670 66.667 0.00 0.00 0.00 3.66
273 274 2.515901 GCCTCCACAACCCACAGT 59.484 61.111 0.00 0.00 0.00 3.55
274 275 1.600916 GCCTCCACAACCCACAGTC 60.601 63.158 0.00 0.00 0.00 3.51
275 276 2.056906 GCCTCCACAACCCACAGTCT 62.057 60.000 0.00 0.00 0.00 3.24
276 277 0.250467 CCTCCACAACCCACAGTCTG 60.250 60.000 0.00 0.00 0.00 3.51
277 278 0.758734 CTCCACAACCCACAGTCTGA 59.241 55.000 6.91 0.00 0.00 3.27
278 279 0.468226 TCCACAACCCACAGTCTGAC 59.532 55.000 6.91 0.00 0.00 3.51
279 280 0.180171 CCACAACCCACAGTCTGACA 59.820 55.000 10.88 0.00 0.00 3.58
280 281 1.586422 CACAACCCACAGTCTGACAG 58.414 55.000 10.88 4.45 0.00 3.51
281 282 1.134401 CACAACCCACAGTCTGACAGT 60.134 52.381 10.88 5.19 0.00 3.55
282 283 1.134401 ACAACCCACAGTCTGACAGTG 60.134 52.381 22.03 22.03 35.67 3.66
286 287 1.302033 CACAGTCTGACAGTGGGGC 60.302 63.158 21.45 0.00 32.77 5.80
287 288 2.348998 CAGTCTGACAGTGGGGCC 59.651 66.667 10.88 0.00 0.00 5.80
288 289 2.122413 AGTCTGACAGTGGGGCCA 60.122 61.111 10.88 0.00 0.00 5.36
289 290 1.539869 AGTCTGACAGTGGGGCCAT 60.540 57.895 10.88 0.00 0.00 4.40
290 291 1.377725 GTCTGACAGTGGGGCCATG 60.378 63.158 4.39 3.13 0.00 3.66
291 292 2.753043 CTGACAGTGGGGCCATGC 60.753 66.667 4.39 0.00 0.00 4.06
292 293 3.572447 CTGACAGTGGGGCCATGCA 62.572 63.158 4.39 0.00 0.00 3.96
293 294 3.064324 GACAGTGGGGCCATGCAC 61.064 66.667 4.39 4.33 0.00 4.57
334 335 3.550656 GGATACGCCTGCATACGC 58.449 61.111 8.28 0.00 39.24 4.42
336 337 1.557443 GGATACGCCTGCATACGCAC 61.557 60.000 8.28 1.30 45.36 5.34
337 338 0.597637 GATACGCCTGCATACGCACT 60.598 55.000 8.28 0.00 45.36 4.40
338 339 0.179084 ATACGCCTGCATACGCACTT 60.179 50.000 8.28 0.00 45.36 3.16
339 340 0.390603 TACGCCTGCATACGCACTTT 60.391 50.000 8.28 0.00 45.36 2.66
340 341 1.226101 CGCCTGCATACGCACTTTG 60.226 57.895 0.00 0.00 45.36 2.77
341 342 1.875963 GCCTGCATACGCACTTTGT 59.124 52.632 0.00 0.00 45.36 2.83
342 343 0.454957 GCCTGCATACGCACTTTGTG 60.455 55.000 0.00 0.00 45.36 3.33
343 344 1.155889 CCTGCATACGCACTTTGTGA 58.844 50.000 1.52 0.00 45.36 3.58
344 345 1.135972 CCTGCATACGCACTTTGTGAC 60.136 52.381 1.52 0.00 45.36 3.67
345 346 0.871722 TGCATACGCACTTTGTGACC 59.128 50.000 1.52 0.00 45.36 4.02
346 347 0.179225 GCATACGCACTTTGTGACCG 60.179 55.000 1.52 0.00 35.23 4.79
347 348 1.144969 CATACGCACTTTGTGACCGT 58.855 50.000 1.52 5.44 36.55 4.83
348 349 2.330286 CATACGCACTTTGTGACCGTA 58.670 47.619 10.94 10.94 38.24 4.02
349 350 2.728690 TACGCACTTTGTGACCGTAT 57.271 45.000 1.52 0.00 34.99 3.06
350 351 1.873698 ACGCACTTTGTGACCGTATT 58.126 45.000 1.52 0.00 35.23 1.89
351 352 2.215196 ACGCACTTTGTGACCGTATTT 58.785 42.857 1.52 0.00 35.23 1.40
352 353 2.032377 ACGCACTTTGTGACCGTATTTG 60.032 45.455 1.52 0.00 35.23 2.32
353 354 2.315901 GCACTTTGTGACCGTATTTGC 58.684 47.619 1.52 0.00 35.23 3.68
354 355 2.287308 GCACTTTGTGACCGTATTTGCA 60.287 45.455 1.52 0.00 35.23 4.08
355 356 3.611530 GCACTTTGTGACCGTATTTGCAT 60.612 43.478 1.52 0.00 35.23 3.96
356 357 3.913763 CACTTTGTGACCGTATTTGCATG 59.086 43.478 0.00 0.00 35.23 4.06
357 358 3.818210 ACTTTGTGACCGTATTTGCATGA 59.182 39.130 0.00 0.00 0.00 3.07
358 359 4.083324 ACTTTGTGACCGTATTTGCATGAG 60.083 41.667 0.00 0.00 0.00 2.90
359 360 3.326836 TGTGACCGTATTTGCATGAGA 57.673 42.857 0.00 0.00 0.00 3.27
360 361 3.669536 TGTGACCGTATTTGCATGAGAA 58.330 40.909 0.00 0.00 0.00 2.87
361 362 3.435327 TGTGACCGTATTTGCATGAGAAC 59.565 43.478 0.00 0.00 0.00 3.01
362 363 2.670905 TGACCGTATTTGCATGAGAACG 59.329 45.455 0.00 0.00 0.00 3.95
363 364 1.396996 ACCGTATTTGCATGAGAACGC 59.603 47.619 0.00 0.00 0.00 4.84
364 365 1.396648 CCGTATTTGCATGAGAACGCA 59.603 47.619 0.00 0.00 36.05 5.24
365 366 2.159585 CCGTATTTGCATGAGAACGCAA 60.160 45.455 0.00 0.00 45.93 4.85
382 383 4.685169 CGCAAGTTGAGTGACCATAAAT 57.315 40.909 7.16 0.00 0.00 1.40
383 384 5.046910 CGCAAGTTGAGTGACCATAAATT 57.953 39.130 7.16 0.00 0.00 1.82
384 385 5.088739 CGCAAGTTGAGTGACCATAAATTC 58.911 41.667 7.16 0.00 0.00 2.17
385 386 5.088739 GCAAGTTGAGTGACCATAAATTCG 58.911 41.667 7.16 0.00 0.00 3.34
386 387 5.334879 GCAAGTTGAGTGACCATAAATTCGT 60.335 40.000 7.16 0.00 0.00 3.85
387 388 6.128391 GCAAGTTGAGTGACCATAAATTCGTA 60.128 38.462 7.16 0.00 0.00 3.43
388 389 7.414098 GCAAGTTGAGTGACCATAAATTCGTAT 60.414 37.037 7.16 0.00 0.00 3.06
389 390 8.450964 CAAGTTGAGTGACCATAAATTCGTATT 58.549 33.333 0.00 0.00 0.00 1.89
390 391 8.561738 AGTTGAGTGACCATAAATTCGTATTT 57.438 30.769 5.32 5.32 37.68 1.40
391 392 9.010029 AGTTGAGTGACCATAAATTCGTATTTT 57.990 29.630 5.29 0.00 35.61 1.82
392 393 9.620660 GTTGAGTGACCATAAATTCGTATTTTT 57.379 29.630 5.29 0.00 35.61 1.94
435 436 7.509141 TGAACATTCAGAGCAAGTTTTATGA 57.491 32.000 0.00 0.00 32.50 2.15
436 437 7.362662 TGAACATTCAGAGCAAGTTTTATGAC 58.637 34.615 0.00 0.00 32.50 3.06
437 438 7.229306 TGAACATTCAGAGCAAGTTTTATGACT 59.771 33.333 0.00 0.00 32.50 3.41
438 439 7.138692 ACATTCAGAGCAAGTTTTATGACTC 57.861 36.000 0.00 0.00 0.00 3.36
439 440 5.845985 TTCAGAGCAAGTTTTATGACTCG 57.154 39.130 0.00 0.00 0.00 4.18
440 441 4.883083 TCAGAGCAAGTTTTATGACTCGT 58.117 39.130 0.00 0.00 0.00 4.18
441 442 4.686091 TCAGAGCAAGTTTTATGACTCGTG 59.314 41.667 0.00 0.00 0.00 4.35
442 443 4.686091 CAGAGCAAGTTTTATGACTCGTGA 59.314 41.667 0.00 0.00 0.00 4.35
443 444 5.349817 CAGAGCAAGTTTTATGACTCGTGAT 59.650 40.000 0.00 0.00 0.00 3.06
444 445 5.349817 AGAGCAAGTTTTATGACTCGTGATG 59.650 40.000 0.00 0.00 0.00 3.07
445 446 5.237815 AGCAAGTTTTATGACTCGTGATGA 58.762 37.500 0.00 0.00 0.00 2.92
446 447 5.877012 AGCAAGTTTTATGACTCGTGATGAT 59.123 36.000 0.00 0.00 0.00 2.45
447 448 7.041721 AGCAAGTTTTATGACTCGTGATGATA 58.958 34.615 0.00 0.00 0.00 2.15
448 449 7.712639 AGCAAGTTTTATGACTCGTGATGATAT 59.287 33.333 0.00 0.00 0.00 1.63
449 450 8.338259 GCAAGTTTTATGACTCGTGATGATATT 58.662 33.333 0.00 0.00 0.00 1.28
452 453 9.477484 AGTTTTATGACTCGTGATGATATTACC 57.523 33.333 0.00 0.00 0.00 2.85
453 454 9.477484 GTTTTATGACTCGTGATGATATTACCT 57.523 33.333 0.00 0.00 0.00 3.08
475 476 6.038603 ACCTCTAAACTAAAACCAAAACCGTC 59.961 38.462 0.00 0.00 0.00 4.79
490 491 0.316360 CCGTCCCAACAAACGTTTCG 60.316 55.000 11.37 9.66 37.19 3.46
578 579 3.477899 ACGTAGCGTTACCACTAGAAC 57.522 47.619 3.68 0.00 36.35 3.01
593 594 4.058817 ACTAGAACTTTCACTTTCAGGCG 58.941 43.478 0.00 0.00 0.00 5.52
600 601 4.626081 ACTTTCAGGCGCGCAGGT 62.626 61.111 34.42 16.07 0.00 4.00
678 850 1.830279 ACCAATGATGACACTGCTGG 58.170 50.000 0.00 0.00 0.00 4.85
680 852 2.305635 ACCAATGATGACACTGCTGGTA 59.694 45.455 0.00 0.00 33.99 3.25
681 853 3.054139 ACCAATGATGACACTGCTGGTAT 60.054 43.478 0.00 0.00 33.99 2.73
682 854 3.314357 CCAATGATGACACTGCTGGTATG 59.686 47.826 0.00 0.00 0.00 2.39
765 940 0.322277 AGTGCTCTGCATGACCCTTG 60.322 55.000 0.00 0.00 41.91 3.61
895 1076 3.438781 TGCAACGTATCCCTCAAACAATC 59.561 43.478 0.00 0.00 0.00 2.67
925 1106 0.193574 TTGTCCCTCTCCCTCAGGTT 59.806 55.000 0.00 0.00 0.00 3.50
954 1135 2.686915 CAATCTTCCATTGCTCAGACCC 59.313 50.000 0.00 0.00 0.00 4.46
995 1176 2.783135 TCCAAGAACTCACAATCCAGC 58.217 47.619 0.00 0.00 0.00 4.85
1044 1225 0.963856 TGTTCCTCCTCTTCGCGCTA 60.964 55.000 5.56 0.00 0.00 4.26
1050 1231 0.598562 TCCTCTTCGCGCTATCCATC 59.401 55.000 5.56 0.00 0.00 3.51
1096 1277 0.898320 CGATTATCCGAGCCCCATCT 59.102 55.000 0.00 0.00 0.00 2.90
1242 1423 4.765449 TGCGGCTTCATCTGCGCT 62.765 61.111 9.73 0.00 41.12 5.92
1334 1515 2.515991 CAACACCACGGCCACACT 60.516 61.111 2.24 0.00 0.00 3.55
1503 1684 5.128919 GTGAATCTTGCTGATACTGGGAAT 58.871 41.667 0.00 0.00 34.45 3.01
1548 1729 0.608640 AGACGGTGTGGGAGTCATTC 59.391 55.000 0.00 0.00 37.36 2.67
1785 1966 3.159472 TGATGAAGCAAAGAATGGCACT 58.841 40.909 0.00 0.00 0.00 4.40
1858 2039 3.073678 AGCACACGCATCAAGTTATTCA 58.926 40.909 0.00 0.00 42.27 2.57
1863 2044 7.226523 AGCACACGCATCAAGTTATTCAATATA 59.773 33.333 0.00 0.00 42.27 0.86
1866 2047 9.271828 ACACGCATCAAGTTATTCAATATATCA 57.728 29.630 0.00 0.00 0.00 2.15
1908 2089 1.747924 CAGCTCATGAGTCTCGAGGAA 59.252 52.381 23.38 0.00 0.00 3.36
1911 2092 2.223479 GCTCATGAGTCTCGAGGAAGAC 60.223 54.545 23.38 3.27 44.96 3.01
1955 2136 2.758979 GGAACGGTCTCTCATGGAAGTA 59.241 50.000 0.00 0.00 0.00 2.24
2053 2234 1.917872 GGGACAATGTAGTTGCCCAA 58.082 50.000 2.56 0.00 45.65 4.12
2072 2253 4.338879 CCAACTGGAAATTCTGGAGACAT 58.661 43.478 0.00 0.00 37.19 3.06
2092 2273 4.161565 ACATACTTTTCCGTCAGCTGGATA 59.838 41.667 15.13 0.00 34.91 2.59
2097 2278 0.681887 TCCGTCAGCTGGATAACCGA 60.682 55.000 15.13 2.07 39.42 4.69
2117 2298 3.421844 GACAACCTAATCTGGGCTGTTT 58.578 45.455 0.00 0.00 30.65 2.83
2131 2312 0.954452 CTGTTTCCCAGCAACTCCAC 59.046 55.000 0.00 0.00 33.59 4.02
2152 2333 2.740981 CTGTCTTGTGACTTGATCCAGC 59.259 50.000 0.00 0.00 43.29 4.85
2200 2381 8.377681 CAGATGTCACATATTTCAATTTTGCAC 58.622 33.333 0.00 0.00 0.00 4.57
2226 2407 4.727507 TTGGACTACTGATGAAGAGAGC 57.272 45.455 0.00 0.00 0.00 4.09
2231 2412 3.705579 ACTACTGATGAAGAGAGCTGCAT 59.294 43.478 1.02 0.00 43.35 3.96
2233 2414 2.500504 ACTGATGAAGAGAGCTGCATGA 59.499 45.455 1.02 0.00 40.63 3.07
2277 2458 1.202639 TGCAAAGCTGTCTTCTTCCGA 60.203 47.619 0.00 0.00 0.00 4.55
2280 2461 2.872245 CAAAGCTGTCTTCTTCCGACAA 59.128 45.455 0.00 0.00 40.53 3.18
2292 2473 3.813166 TCTTCCGACAACAAAATGACTCC 59.187 43.478 0.00 0.00 0.00 3.85
2307 2488 8.960591 CAAAATGACTCCTATGGTTCTTGTTAT 58.039 33.333 0.00 0.00 0.00 1.89
2364 2545 6.921412 TGAACCAGGAACCATTGGATATAAT 58.079 36.000 10.37 0.00 37.89 1.28
2403 2584 1.003118 GTGCAGATGTTACCTCCACCA 59.997 52.381 0.00 0.00 0.00 4.17
2406 2587 0.902531 AGATGTTACCTCCACCACCG 59.097 55.000 0.00 0.00 0.00 4.94
2418 2599 0.316204 CACCACCGTCGAGTAAAGGT 59.684 55.000 0.00 0.00 37.49 3.50
2463 2644 4.866508 TGGTGTTCCTGTTCTAGTAGTG 57.133 45.455 0.00 0.00 34.23 2.74
2472 2653 4.400884 CCTGTTCTAGTAGTGCTCATCTGT 59.599 45.833 0.00 0.00 0.00 3.41
2496 2677 4.999950 GTGCTCCTTCTCTTCATCAAAAGA 59.000 41.667 0.00 0.00 34.22 2.52
2523 2704 1.742268 GCAAAGAGGATGCAAGAGGAC 59.258 52.381 0.00 0.00 43.29 3.85
2529 2710 0.465705 GGATGCAAGAGGACGATCCA 59.534 55.000 0.00 0.00 39.61 3.41
2592 2773 4.660789 ACAGCTGAAAGAAGCAACAAAT 57.339 36.364 23.35 0.00 46.08 2.32
2608 2789 5.903530 GCAACAAATAACTTCAGCAAAAAGC 59.096 36.000 0.00 0.00 46.19 3.51
2646 2827 7.229506 GGATTTGGTCCAGTATATGAAGGAAAG 59.770 40.741 0.00 0.00 46.96 2.62
2654 2835 6.261826 CCAGTATATGAAGGAAAGCTTGGAAG 59.738 42.308 0.00 0.00 0.00 3.46
2724 2905 2.947652 AGAATTCATGGCCGAAGTCATG 59.052 45.455 18.81 7.68 41.31 3.07
2736 2917 2.730090 CGAAGTCATGACAATTGGCAGC 60.730 50.000 27.02 12.12 35.91 5.25
2751 2932 8.372459 ACAATTGGCAGCATTCATCATATAAAT 58.628 29.630 10.83 0.00 0.00 1.40
2778 2959 7.661536 TGTTAGATTGATAGGTTACTGCTCT 57.338 36.000 0.00 0.00 0.00 4.09
2790 2971 4.082571 GGTTACTGCTCTGACAAATTGCAT 60.083 41.667 0.00 0.00 33.02 3.96
2799 2980 3.282021 TGACAAATTGCATAGGCTCCTC 58.718 45.455 0.00 0.00 41.91 3.71
2817 2998 2.286294 CCTCGTTTATGAGCACATGAGC 59.714 50.000 7.07 7.07 37.87 4.26
2821 3002 4.033019 CGTTTATGAGCACATGAGCAATG 58.967 43.478 17.61 4.21 42.48 2.82
2875 3056 5.034852 TCAAAGTGATTCACTCAGTTGGA 57.965 39.130 19.23 4.65 44.98 3.53
2881 3062 4.629200 GTGATTCACTCAGTTGGACATCTC 59.371 45.833 9.59 0.00 33.51 2.75
2895 3076 6.516739 TGGACATCTCGATACAGGATTATC 57.483 41.667 0.00 0.00 0.00 1.75
2958 3139 3.403038 CCGACAGAAGATTGTTCACCTT 58.597 45.455 0.00 0.00 0.00 3.50
3234 3415 5.647658 CACCAATCTGATTAACCTACTGCAA 59.352 40.000 1.98 0.00 0.00 4.08
3255 3436 5.786311 CAAGAGAAAATCAAGATTGGGCAA 58.214 37.500 0.00 0.00 0.00 4.52
3301 3482 6.586463 TCAGAATGAAGACGTTCAGTTACATC 59.414 38.462 0.00 0.00 45.97 3.06
3308 3489 2.058798 CGTTCAGTTACATCGTGCAGT 58.941 47.619 0.00 0.00 0.00 4.40
3312 3493 3.925379 TCAGTTACATCGTGCAGTGATT 58.075 40.909 0.00 0.00 0.00 2.57
3314 3495 5.660460 TCAGTTACATCGTGCAGTGATTAT 58.340 37.500 0.00 0.00 0.00 1.28
3351 3532 2.974698 GTCTGGTGCTTGCAGCGT 60.975 61.111 17.95 0.00 46.26 5.07
3400 3581 3.071023 ACAGGTCGTGAAGATCTTGGAAA 59.929 43.478 14.00 0.00 38.52 3.13
3413 3594 2.622942 TCTTGGAAAGTGCAATGGACAC 59.377 45.455 7.79 0.00 46.34 3.67
3417 3598 2.622942 GGAAAGTGCAATGGACACAGAA 59.377 45.455 7.79 0.00 40.59 3.02
3421 3608 0.178995 TGCAATGGACACAGAAGCCA 60.179 50.000 0.00 0.00 35.91 4.75
3456 3643 5.174395 ACTAGCAGAGATGACATTTGTGAC 58.826 41.667 7.24 0.00 0.00 3.67
3468 3655 0.953471 TTTGTGACGCTTCATCCCCG 60.953 55.000 0.00 0.00 33.11 5.73
3494 3681 2.610694 CGGTGCCTGTGTCAGCAAG 61.611 63.158 0.00 0.00 32.65 4.01
3496 3683 0.607489 GGTGCCTGTGTCAGCAAGAT 60.607 55.000 0.00 0.00 32.65 2.40
3497 3684 0.520404 GTGCCTGTGTCAGCAAGATG 59.480 55.000 0.00 0.00 0.00 2.90
3520 3713 8.674263 ATGAAATGCTTTAGAGAATGTAGGAG 57.326 34.615 0.00 0.00 0.00 3.69
3522 3715 8.321353 TGAAATGCTTTAGAGAATGTAGGAGAA 58.679 33.333 0.00 0.00 0.00 2.87
3525 3718 8.729805 ATGCTTTAGAGAATGTAGGAGAAAAG 57.270 34.615 0.00 0.00 0.00 2.27
3526 3719 7.907389 TGCTTTAGAGAATGTAGGAGAAAAGA 58.093 34.615 0.00 0.00 0.00 2.52
3561 3754 9.612066 TGAGATTATATTGCAACTATTGTGTGA 57.388 29.630 0.00 0.00 0.00 3.58
3563 3756 9.618890 AGATTATATTGCAACTATTGTGTGACT 57.381 29.630 0.00 0.00 0.00 3.41
3564 3757 9.869844 GATTATATTGCAACTATTGTGTGACTC 57.130 33.333 0.00 0.00 0.00 3.36
3577 3771 6.854496 TTGTGTGACTCGCTTTATAGTTTT 57.146 33.333 0.00 0.00 0.00 2.43
3578 3772 6.223138 TGTGTGACTCGCTTTATAGTTTTG 57.777 37.500 0.00 0.00 0.00 2.44
3581 3775 7.130269 GTGTGACTCGCTTTATAGTTTTGTTT 58.870 34.615 0.00 0.00 0.00 2.83
3582 3776 7.320560 GTGTGACTCGCTTTATAGTTTTGTTTC 59.679 37.037 0.00 0.00 0.00 2.78
3674 3873 9.152595 CAGGACAAGTAGAGGTAGTTTAATTTC 57.847 37.037 0.00 0.00 0.00 2.17
3677 3876 8.215954 ACAAGTAGAGGTAGTTTAATTTCCCT 57.784 34.615 0.00 0.00 0.00 4.20
3696 3895 4.885325 TCCCTTTCTGTTTTCCACACTAAC 59.115 41.667 0.00 0.00 0.00 2.34
3714 4029 9.580916 CACACTAACATGTATTATGTATTTCGC 57.419 33.333 0.00 0.00 0.00 4.70
3717 4032 8.495949 ACTAACATGTATTATGTATTTCGCTGC 58.504 33.333 0.00 0.00 0.00 5.25
3822 4148 8.553459 TTTTTCACACCATTTCTTAAAGCAAA 57.447 26.923 0.00 0.00 0.00 3.68
3869 4195 8.397148 GTTTGACATCAAATTTTCCATTTGTGT 58.603 29.630 10.11 9.78 46.12 3.72
3892 4218 1.760613 CATCCTTGCCTTTCATGCCAT 59.239 47.619 0.00 0.00 0.00 4.40
3896 4222 3.072768 TCCTTGCCTTTCATGCCATTTTT 59.927 39.130 0.00 0.00 0.00 1.94
3994 4328 2.151502 TGGAAAAGGACCACAAGCAA 57.848 45.000 0.00 0.00 32.03 3.91
4006 4340 3.251004 ACCACAAGCAACGAAAGATCTTC 59.749 43.478 8.78 1.82 0.00 2.87
4053 4387 7.149973 GGTTTAACCTTTTCCAACAGATAACC 58.850 38.462 6.92 0.00 34.73 2.85
4068 4402 6.426587 ACAGATAACCAACTATGAAAGCCAT 58.573 36.000 0.00 0.00 39.25 4.40
4079 4413 2.101783 TGAAAGCCATGCCATAACAGG 58.898 47.619 0.00 0.00 0.00 4.00
4120 4454 6.661805 CCTAAACCCTCTTTGCCAAACTATAA 59.338 38.462 0.00 0.00 0.00 0.98
4134 4468 6.142817 CCAAACTATAACAAGCAACAGACAC 58.857 40.000 0.00 0.00 0.00 3.67
4142 4476 2.877786 CAAGCAACAGACACCACATGTA 59.122 45.455 0.00 0.00 43.56 2.29
4150 4484 4.252878 CAGACACCACATGTATTGCTGTA 58.747 43.478 0.00 0.00 43.56 2.74
4226 4584 5.296780 GCAAGGCTACAACTTAGCATTATCA 59.703 40.000 3.12 0.00 41.78 2.15
4243 4601 9.664332 AGCATTATCAGTTCTTATGTATCATCC 57.336 33.333 0.00 0.00 0.00 3.51
4280 4638 4.385748 GGTTCGCCATCTTTTCAACAATTC 59.614 41.667 0.00 0.00 37.19 2.17
4292 4650 2.552315 TCAACAATTCGAGGGAGCAAAC 59.448 45.455 0.00 0.00 0.00 2.93
4299 4657 0.875059 CGAGGGAGCAAACCAAAGAC 59.125 55.000 0.00 0.00 0.00 3.01
4351 4709 9.319143 GCACTAATAGAGAACACATAGTTGATT 57.681 33.333 0.00 0.00 41.51 2.57
4392 4751 3.559655 TGAAGACATCAACACCTTGTTCG 59.440 43.478 0.00 0.00 38.77 3.95
4407 4766 2.432444 TGTTCGAAAAGCAGTATGGGG 58.568 47.619 0.00 0.00 35.86 4.96
4452 4811 7.500992 TCAGACCCTGAATAAATCATACAGTC 58.499 38.462 0.00 0.00 37.57 3.51
4493 4852 9.905713 AGTAGAAAACAATTATTCTAGCATGGA 57.094 29.630 0.00 0.00 38.46 3.41
4496 4855 9.412460 AGAAAACAATTATTCTAGCATGGATCA 57.588 29.630 0.00 0.00 34.24 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.966665 AGAATTTTTGAGGGTGAGCCAAA 59.033 39.130 2.50 0.00 36.17 3.28
1 2 3.575805 AGAATTTTTGAGGGTGAGCCAA 58.424 40.909 2.50 0.00 36.17 4.52
2 3 3.243359 AGAATTTTTGAGGGTGAGCCA 57.757 42.857 2.50 0.00 36.17 4.75
3 4 4.039124 TGAAAGAATTTTTGAGGGTGAGCC 59.961 41.667 0.00 0.00 39.27 4.70
4 5 5.010012 TCTGAAAGAATTTTTGAGGGTGAGC 59.990 40.000 0.00 0.00 42.31 4.26
5 6 6.639632 TCTGAAAGAATTTTTGAGGGTGAG 57.360 37.500 0.00 0.00 42.31 3.51
44 45 9.834628 GACAACCATAAAATTACTCGAATTCAA 57.165 29.630 6.22 0.00 36.71 2.69
45 46 8.455682 GGACAACCATAAAATTACTCGAATTCA 58.544 33.333 6.22 0.00 34.92 2.57
46 47 7.913821 GGGACAACCATAAAATTACTCGAATTC 59.086 37.037 0.00 0.00 36.55 2.17
47 48 7.414762 CGGGACAACCATAAAATTACTCGAATT 60.415 37.037 0.00 0.00 38.11 2.17
48 49 6.037830 CGGGACAACCATAAAATTACTCGAAT 59.962 38.462 0.00 0.00 40.22 3.34
49 50 5.352016 CGGGACAACCATAAAATTACTCGAA 59.648 40.000 0.00 0.00 40.22 3.71
50 51 4.871557 CGGGACAACCATAAAATTACTCGA 59.128 41.667 0.00 0.00 40.22 4.04
51 52 4.495184 GCGGGACAACCATAAAATTACTCG 60.495 45.833 0.00 0.00 40.22 4.18
52 53 4.201980 GGCGGGACAACCATAAAATTACTC 60.202 45.833 0.00 0.00 40.22 2.59
53 54 3.697542 GGCGGGACAACCATAAAATTACT 59.302 43.478 0.00 0.00 40.22 2.24
54 55 3.444388 TGGCGGGACAACCATAAAATTAC 59.556 43.478 0.00 0.00 40.22 1.89
55 56 3.698289 TGGCGGGACAACCATAAAATTA 58.302 40.909 0.00 0.00 40.22 1.40
56 57 2.530701 TGGCGGGACAACCATAAAATT 58.469 42.857 0.00 0.00 40.22 1.82
57 58 2.223803 TGGCGGGACAACCATAAAAT 57.776 45.000 0.00 0.00 40.22 1.82
58 59 1.996798 TTGGCGGGACAACCATAAAA 58.003 45.000 0.00 0.00 40.22 1.52
59 60 1.996798 TTTGGCGGGACAACCATAAA 58.003 45.000 0.00 0.00 40.22 1.40
60 61 1.996798 TTTTGGCGGGACAACCATAA 58.003 45.000 0.00 0.00 40.22 1.90
61 62 1.996798 TTTTTGGCGGGACAACCATA 58.003 45.000 0.00 0.00 40.22 2.74
62 63 1.347062 ATTTTTGGCGGGACAACCAT 58.653 45.000 0.00 0.00 40.22 3.55
63 64 1.996798 TATTTTTGGCGGGACAACCA 58.003 45.000 0.00 0.00 40.22 3.67
64 65 4.929819 ATATATTTTTGGCGGGACAACC 57.070 40.909 0.00 0.00 0.00 3.77
65 66 8.760569 CAAATAATATATTTTTGGCGGGACAAC 58.239 33.333 2.68 0.00 0.00 3.32
66 67 8.478877 ACAAATAATATATTTTTGGCGGGACAA 58.521 29.630 22.71 0.00 35.23 3.18
67 68 8.012957 ACAAATAATATATTTTTGGCGGGACA 57.987 30.769 22.71 0.69 35.23 4.02
68 69 8.760569 CAACAAATAATATATTTTTGGCGGGAC 58.239 33.333 22.71 0.00 35.23 4.46
69 70 7.928706 CCAACAAATAATATATTTTTGGCGGGA 59.071 33.333 22.71 1.61 35.23 5.14
70 71 7.172361 CCCAACAAATAATATATTTTTGGCGGG 59.828 37.037 24.38 24.38 38.48 6.13
71 72 7.713073 ACCCAACAAATAATATATTTTTGGCGG 59.287 33.333 22.71 21.12 35.23 6.13
72 73 8.655651 ACCCAACAAATAATATATTTTTGGCG 57.344 30.769 22.71 17.02 35.23 5.69
93 94 9.787435 GAATACTGTATTATATTGGTCAACCCA 57.213 33.333 12.73 0.00 43.27 4.51
94 95 9.787435 TGAATACTGTATTATATTGGTCAACCC 57.213 33.333 12.73 0.00 34.29 4.11
117 118 9.973661 TCCTTTCCAGTCTAATAATGAAATGAA 57.026 29.630 0.00 0.00 0.00 2.57
118 119 9.973661 TTCCTTTCCAGTCTAATAATGAAATGA 57.026 29.630 0.00 0.00 0.00 2.57
121 122 8.686334 GCATTCCTTTCCAGTCTAATAATGAAA 58.314 33.333 0.00 0.00 0.00 2.69
122 123 8.055181 AGCATTCCTTTCCAGTCTAATAATGAA 58.945 33.333 0.00 0.00 0.00 2.57
123 124 7.577303 AGCATTCCTTTCCAGTCTAATAATGA 58.423 34.615 0.00 0.00 0.00 2.57
124 125 7.814264 AGCATTCCTTTCCAGTCTAATAATG 57.186 36.000 0.00 0.00 0.00 1.90
125 126 7.836183 ACAAGCATTCCTTTCCAGTCTAATAAT 59.164 33.333 0.00 0.00 0.00 1.28
126 127 7.121168 CACAAGCATTCCTTTCCAGTCTAATAA 59.879 37.037 0.00 0.00 0.00 1.40
127 128 6.599244 CACAAGCATTCCTTTCCAGTCTAATA 59.401 38.462 0.00 0.00 0.00 0.98
128 129 5.416952 CACAAGCATTCCTTTCCAGTCTAAT 59.583 40.000 0.00 0.00 0.00 1.73
129 130 4.761739 CACAAGCATTCCTTTCCAGTCTAA 59.238 41.667 0.00 0.00 0.00 2.10
130 131 4.202461 ACACAAGCATTCCTTTCCAGTCTA 60.202 41.667 0.00 0.00 0.00 2.59
131 132 3.152341 CACAAGCATTCCTTTCCAGTCT 58.848 45.455 0.00 0.00 0.00 3.24
132 133 2.887152 ACACAAGCATTCCTTTCCAGTC 59.113 45.455 0.00 0.00 0.00 3.51
133 134 2.624838 CACACAAGCATTCCTTTCCAGT 59.375 45.455 0.00 0.00 0.00 4.00
134 135 2.608752 GCACACAAGCATTCCTTTCCAG 60.609 50.000 0.00 0.00 0.00 3.86
135 136 1.340889 GCACACAAGCATTCCTTTCCA 59.659 47.619 0.00 0.00 0.00 3.53
136 137 1.666888 CGCACACAAGCATTCCTTTCC 60.667 52.381 0.00 0.00 0.00 3.13
137 138 1.001378 ACGCACACAAGCATTCCTTTC 60.001 47.619 0.00 0.00 0.00 2.62
138 139 1.032014 ACGCACACAAGCATTCCTTT 58.968 45.000 0.00 0.00 0.00 3.11
139 140 0.311790 CACGCACACAAGCATTCCTT 59.688 50.000 0.00 0.00 0.00 3.36
140 141 1.518056 CCACGCACACAAGCATTCCT 61.518 55.000 0.00 0.00 0.00 3.36
141 142 1.081242 CCACGCACACAAGCATTCC 60.081 57.895 0.00 0.00 0.00 3.01
142 143 0.030638 AACCACGCACACAAGCATTC 59.969 50.000 0.00 0.00 0.00 2.67
143 144 1.266718 CTAACCACGCACACAAGCATT 59.733 47.619 0.00 0.00 0.00 3.56
144 145 0.874390 CTAACCACGCACACAAGCAT 59.126 50.000 0.00 0.00 0.00 3.79
145 146 1.781025 GCTAACCACGCACACAAGCA 61.781 55.000 0.00 0.00 0.00 3.91
146 147 1.082104 GCTAACCACGCACACAAGC 60.082 57.895 0.00 0.00 0.00 4.01
147 148 0.512952 GAGCTAACCACGCACACAAG 59.487 55.000 0.00 0.00 0.00 3.16
148 149 1.218875 CGAGCTAACCACGCACACAA 61.219 55.000 0.00 0.00 0.00 3.33
149 150 1.663388 CGAGCTAACCACGCACACA 60.663 57.895 0.00 0.00 0.00 3.72
150 151 3.156334 CGAGCTAACCACGCACAC 58.844 61.111 0.00 0.00 0.00 3.82
155 156 2.126618 TCACGCGAGCTAACCACG 60.127 61.111 15.93 0.00 0.00 4.94
156 157 0.942410 TTGTCACGCGAGCTAACCAC 60.942 55.000 15.93 0.00 0.00 4.16
157 158 0.666274 CTTGTCACGCGAGCTAACCA 60.666 55.000 15.93 0.00 0.00 3.67
158 159 0.666577 ACTTGTCACGCGAGCTAACC 60.667 55.000 15.93 0.00 31.61 2.85
159 160 1.137513 AACTTGTCACGCGAGCTAAC 58.862 50.000 15.93 0.00 31.61 2.34
160 161 1.525197 CAAACTTGTCACGCGAGCTAA 59.475 47.619 15.93 2.40 31.61 3.09
161 162 1.136690 CAAACTTGTCACGCGAGCTA 58.863 50.000 15.93 0.00 31.61 3.32
162 163 0.529773 TCAAACTTGTCACGCGAGCT 60.530 50.000 15.93 0.00 31.61 4.09
163 164 0.303493 TTCAAACTTGTCACGCGAGC 59.697 50.000 15.93 1.51 31.61 5.03
164 165 1.326245 TGTTCAAACTTGTCACGCGAG 59.674 47.619 15.93 4.59 34.71 5.03
165 166 1.360820 TGTTCAAACTTGTCACGCGA 58.639 45.000 15.93 0.00 0.00 5.87
166 167 2.036217 CATGTTCAAACTTGTCACGCG 58.964 47.619 3.53 3.53 31.57 6.01
167 168 3.065019 ACATGTTCAAACTTGTCACGC 57.935 42.857 8.20 0.00 41.66 5.34
168 169 3.240401 GCAACATGTTCAAACTTGTCACG 59.760 43.478 8.48 7.70 43.74 4.35
169 170 4.266029 CAGCAACATGTTCAAACTTGTCAC 59.734 41.667 8.48 9.24 43.74 3.67
170 171 4.422840 CAGCAACATGTTCAAACTTGTCA 58.577 39.130 8.48 0.00 43.74 3.58
171 172 3.798337 CCAGCAACATGTTCAAACTTGTC 59.202 43.478 8.48 4.45 43.74 3.18
172 173 3.195396 ACCAGCAACATGTTCAAACTTGT 59.805 39.130 8.48 8.20 45.63 3.16
173 174 3.784338 ACCAGCAACATGTTCAAACTTG 58.216 40.909 8.48 0.00 39.26 3.16
174 175 3.181476 GGACCAGCAACATGTTCAAACTT 60.181 43.478 8.48 0.00 0.00 2.66
175 176 2.362077 GGACCAGCAACATGTTCAAACT 59.638 45.455 8.48 1.11 0.00 2.66
176 177 2.742774 GGACCAGCAACATGTTCAAAC 58.257 47.619 8.48 0.00 0.00 2.93
177 178 1.336440 CGGACCAGCAACATGTTCAAA 59.664 47.619 8.48 0.00 0.00 2.69
178 179 0.950836 CGGACCAGCAACATGTTCAA 59.049 50.000 8.48 0.00 0.00 2.69
179 180 0.107643 TCGGACCAGCAACATGTTCA 59.892 50.000 8.48 0.00 0.00 3.18
180 181 1.453155 ATCGGACCAGCAACATGTTC 58.547 50.000 8.48 4.08 0.00 3.18
181 182 2.356135 GTATCGGACCAGCAACATGTT 58.644 47.619 4.92 4.92 0.00 2.71
182 183 2.024176 GTATCGGACCAGCAACATGT 57.976 50.000 0.00 0.00 0.00 3.21
193 194 1.674441 TCGTGATGTCAGGTATCGGAC 59.326 52.381 0.00 0.00 38.34 4.79
194 195 2.047002 TCGTGATGTCAGGTATCGGA 57.953 50.000 3.03 0.00 33.80 4.55
195 196 3.371102 AATCGTGATGTCAGGTATCGG 57.629 47.619 3.03 0.00 33.80 4.18
196 197 7.408132 AAAATAATCGTGATGTCAGGTATCG 57.592 36.000 3.03 0.00 33.80 2.92
197 198 8.826710 TCAAAAATAATCGTGATGTCAGGTATC 58.173 33.333 3.03 0.00 33.80 2.24
198 199 8.731275 TCAAAAATAATCGTGATGTCAGGTAT 57.269 30.769 3.03 0.00 33.80 2.73
199 200 8.554835 TTCAAAAATAATCGTGATGTCAGGTA 57.445 30.769 3.03 0.00 33.80 3.08
200 201 7.447374 TTCAAAAATAATCGTGATGTCAGGT 57.553 32.000 3.03 0.00 33.80 4.00
201 202 8.400947 AGATTCAAAAATAATCGTGATGTCAGG 58.599 33.333 0.00 0.00 38.20 3.86
202 203 9.778993 AAGATTCAAAAATAATCGTGATGTCAG 57.221 29.630 0.00 0.00 38.20 3.51
208 209 9.128107 GCAGAAAAGATTCAAAAATAATCGTGA 57.872 29.630 0.00 0.00 38.20 4.35
209 210 8.914654 TGCAGAAAAGATTCAAAAATAATCGTG 58.085 29.630 0.00 0.00 38.20 4.35
210 211 9.474920 TTGCAGAAAAGATTCAAAAATAATCGT 57.525 25.926 0.00 0.00 38.20 3.73
217 218 9.771915 GACATTTTTGCAGAAAAGATTCAAAAA 57.228 25.926 11.39 11.79 44.98 1.94
218 219 8.115520 CGACATTTTTGCAGAAAAGATTCAAAA 58.884 29.630 11.39 0.58 38.06 2.44
219 220 7.277539 ACGACATTTTTGCAGAAAAGATTCAAA 59.722 29.630 11.39 0.00 38.06 2.69
220 221 6.756074 ACGACATTTTTGCAGAAAAGATTCAA 59.244 30.769 11.39 0.00 38.06 2.69
221 222 6.272318 ACGACATTTTTGCAGAAAAGATTCA 58.728 32.000 11.39 0.00 38.06 2.57
222 223 6.417635 TGACGACATTTTTGCAGAAAAGATTC 59.582 34.615 11.39 5.49 32.62 2.52
223 224 6.198966 GTGACGACATTTTTGCAGAAAAGATT 59.801 34.615 11.39 0.00 32.62 2.40
224 225 5.687285 GTGACGACATTTTTGCAGAAAAGAT 59.313 36.000 11.39 0.00 32.62 2.40
225 226 5.034152 GTGACGACATTTTTGCAGAAAAGA 58.966 37.500 11.39 0.00 32.62 2.52
226 227 4.797868 TGTGACGACATTTTTGCAGAAAAG 59.202 37.500 6.49 4.96 32.62 2.27
227 228 4.560819 GTGTGACGACATTTTTGCAGAAAA 59.439 37.500 6.49 7.71 33.63 2.29
228 229 4.101942 GTGTGACGACATTTTTGCAGAAA 58.898 39.130 4.71 4.71 33.63 2.52
229 230 3.488384 GGTGTGACGACATTTTTGCAGAA 60.488 43.478 0.00 0.00 33.63 3.02
230 231 2.032799 GGTGTGACGACATTTTTGCAGA 59.967 45.455 0.00 0.00 33.63 4.26
231 232 2.033299 AGGTGTGACGACATTTTTGCAG 59.967 45.455 0.00 0.00 33.63 4.41
232 233 2.020720 AGGTGTGACGACATTTTTGCA 58.979 42.857 0.00 0.00 33.63 4.08
233 234 2.774439 AGGTGTGACGACATTTTTGC 57.226 45.000 0.00 0.00 33.63 3.68
234 235 3.664276 CGCTAGGTGTGACGACATTTTTG 60.664 47.826 0.00 0.00 33.63 2.44
235 236 2.478894 CGCTAGGTGTGACGACATTTTT 59.521 45.455 0.00 0.00 33.63 1.94
236 237 2.066262 CGCTAGGTGTGACGACATTTT 58.934 47.619 0.00 0.00 33.63 1.82
237 238 1.710013 CGCTAGGTGTGACGACATTT 58.290 50.000 0.00 0.00 33.63 2.32
238 239 0.736325 GCGCTAGGTGTGACGACATT 60.736 55.000 0.00 0.00 33.63 2.71
239 240 1.153823 GCGCTAGGTGTGACGACAT 60.154 57.895 0.00 0.00 33.63 3.06
240 241 2.257371 GCGCTAGGTGTGACGACA 59.743 61.111 0.00 0.00 0.00 4.35
241 242 2.506438 GGCGCTAGGTGTGACGAC 60.506 66.667 7.64 0.00 0.00 4.34
242 243 2.675423 AGGCGCTAGGTGTGACGA 60.675 61.111 7.64 0.00 39.67 4.20
243 244 2.202623 GAGGCGCTAGGTGTGACG 60.203 66.667 7.64 0.00 39.67 4.35
244 245 2.184579 GGAGGCGCTAGGTGTGAC 59.815 66.667 7.64 0.00 0.00 3.67
245 246 2.283604 TGGAGGCGCTAGGTGTGA 60.284 61.111 7.64 0.00 0.00 3.58
246 247 2.125512 GTGGAGGCGCTAGGTGTG 60.126 66.667 7.64 0.00 0.00 3.82
247 248 2.214216 TTGTGGAGGCGCTAGGTGT 61.214 57.895 7.64 0.00 0.00 4.16
248 249 1.741770 GTTGTGGAGGCGCTAGGTG 60.742 63.158 7.64 0.00 0.00 4.00
249 250 2.663196 GTTGTGGAGGCGCTAGGT 59.337 61.111 7.64 0.00 0.00 3.08
250 251 2.125106 GGTTGTGGAGGCGCTAGG 60.125 66.667 7.64 0.00 0.00 3.02
251 252 2.125106 GGGTTGTGGAGGCGCTAG 60.125 66.667 7.64 0.00 0.00 3.42
252 253 2.925706 TGGGTTGTGGAGGCGCTA 60.926 61.111 7.64 0.00 0.00 4.26
253 254 4.643387 GTGGGTTGTGGAGGCGCT 62.643 66.667 7.64 0.00 0.00 5.92
254 255 4.947147 TGTGGGTTGTGGAGGCGC 62.947 66.667 0.00 0.00 0.00 6.53
255 256 2.669569 CTGTGGGTTGTGGAGGCG 60.670 66.667 0.00 0.00 0.00 5.52
256 257 1.600916 GACTGTGGGTTGTGGAGGC 60.601 63.158 0.00 0.00 0.00 4.70
257 258 0.250467 CAGACTGTGGGTTGTGGAGG 60.250 60.000 0.00 0.00 0.00 4.30
258 259 0.758734 TCAGACTGTGGGTTGTGGAG 59.241 55.000 1.59 0.00 0.00 3.86
259 260 0.468226 GTCAGACTGTGGGTTGTGGA 59.532 55.000 1.59 0.00 0.00 4.02
260 261 0.180171 TGTCAGACTGTGGGTTGTGG 59.820 55.000 1.59 0.00 0.00 4.17
261 262 1.134401 ACTGTCAGACTGTGGGTTGTG 60.134 52.381 12.04 0.00 0.00 3.33
262 263 1.134401 CACTGTCAGACTGTGGGTTGT 60.134 52.381 25.69 0.00 42.17 3.32
263 264 1.586422 CACTGTCAGACTGTGGGTTG 58.414 55.000 25.69 6.64 42.17 3.77
268 269 1.302033 GCCCCACTGTCAGACTGTG 60.302 63.158 26.19 26.19 44.44 3.66
269 270 2.520536 GGCCCCACTGTCAGACTGT 61.521 63.158 6.91 7.26 0.00 3.55
270 271 1.845627 ATGGCCCCACTGTCAGACTG 61.846 60.000 6.91 5.91 0.00 3.51
271 272 1.539869 ATGGCCCCACTGTCAGACT 60.540 57.895 6.91 0.00 0.00 3.24
272 273 1.377725 CATGGCCCCACTGTCAGAC 60.378 63.158 6.91 0.00 0.00 3.51
273 274 3.080641 CATGGCCCCACTGTCAGA 58.919 61.111 6.91 0.00 0.00 3.27
274 275 2.753043 GCATGGCCCCACTGTCAG 60.753 66.667 0.00 0.00 0.00 3.51
275 276 3.578286 TGCATGGCCCCACTGTCA 61.578 61.111 0.00 0.00 0.00 3.58
276 277 3.064324 GTGCATGGCCCCACTGTC 61.064 66.667 0.00 0.00 0.00 3.51
316 317 2.372690 GCGTATGCAGGCGTATCCG 61.373 63.158 13.03 0.00 42.15 4.18
317 318 3.550656 GCGTATGCAGGCGTATCC 58.449 61.111 13.03 0.00 42.15 2.59
327 328 0.179225 CGGTCACAAAGTGCGTATGC 60.179 55.000 0.00 0.00 43.20 3.14
328 329 1.144969 ACGGTCACAAAGTGCGTATG 58.855 50.000 1.91 0.00 32.47 2.39
329 330 2.728690 TACGGTCACAAAGTGCGTAT 57.271 45.000 6.11 0.00 34.99 3.06
330 331 2.728690 ATACGGTCACAAAGTGCGTA 57.271 45.000 10.71 10.71 38.24 4.42
331 332 1.873698 AATACGGTCACAAAGTGCGT 58.126 45.000 7.67 7.67 36.55 5.24
332 333 2.570169 CAAATACGGTCACAAAGTGCG 58.430 47.619 0.00 0.00 32.98 5.34
333 334 2.287308 TGCAAATACGGTCACAAAGTGC 60.287 45.455 0.00 0.00 32.98 4.40
334 335 3.617540 TGCAAATACGGTCACAAAGTG 57.382 42.857 0.00 0.00 34.45 3.16
335 336 3.818210 TCATGCAAATACGGTCACAAAGT 59.182 39.130 0.00 0.00 0.00 2.66
336 337 4.154015 TCTCATGCAAATACGGTCACAAAG 59.846 41.667 0.00 0.00 0.00 2.77
337 338 4.068599 TCTCATGCAAATACGGTCACAAA 58.931 39.130 0.00 0.00 0.00 2.83
338 339 3.669536 TCTCATGCAAATACGGTCACAA 58.330 40.909 0.00 0.00 0.00 3.33
339 340 3.326836 TCTCATGCAAATACGGTCACA 57.673 42.857 0.00 0.00 0.00 3.58
340 341 3.483574 CGTTCTCATGCAAATACGGTCAC 60.484 47.826 0.00 0.00 0.00 3.67
341 342 2.670905 CGTTCTCATGCAAATACGGTCA 59.329 45.455 0.00 0.00 0.00 4.02
342 343 2.536928 GCGTTCTCATGCAAATACGGTC 60.537 50.000 0.00 0.00 34.70 4.79
343 344 1.396996 GCGTTCTCATGCAAATACGGT 59.603 47.619 0.00 0.00 34.70 4.83
344 345 1.396648 TGCGTTCTCATGCAAATACGG 59.603 47.619 0.00 0.00 42.25 4.02
345 346 2.804421 TGCGTTCTCATGCAAATACG 57.196 45.000 0.00 0.00 42.25 3.06
351 352 1.532437 CTCAACTTGCGTTCTCATGCA 59.468 47.619 0.00 0.00 43.58 3.96
352 353 1.532868 ACTCAACTTGCGTTCTCATGC 59.467 47.619 0.00 0.00 35.21 4.06
353 354 2.802247 TCACTCAACTTGCGTTCTCATG 59.198 45.455 0.00 0.00 0.00 3.07
354 355 2.802816 GTCACTCAACTTGCGTTCTCAT 59.197 45.455 0.00 0.00 0.00 2.90
355 356 2.201732 GTCACTCAACTTGCGTTCTCA 58.798 47.619 0.00 0.00 0.00 3.27
356 357 1.527311 GGTCACTCAACTTGCGTTCTC 59.473 52.381 0.00 0.00 0.00 2.87
357 358 1.134521 TGGTCACTCAACTTGCGTTCT 60.135 47.619 0.00 0.00 0.00 3.01
358 359 1.295792 TGGTCACTCAACTTGCGTTC 58.704 50.000 0.00 0.00 0.00 3.95
359 360 1.967319 ATGGTCACTCAACTTGCGTT 58.033 45.000 0.00 0.00 0.00 4.84
360 361 2.831685 TATGGTCACTCAACTTGCGT 57.168 45.000 0.00 0.00 0.00 5.24
361 362 4.685169 ATTTATGGTCACTCAACTTGCG 57.315 40.909 0.00 0.00 0.00 4.85
362 363 5.088739 CGAATTTATGGTCACTCAACTTGC 58.911 41.667 0.00 0.00 0.00 4.01
363 364 6.241207 ACGAATTTATGGTCACTCAACTTG 57.759 37.500 0.00 0.00 0.00 3.16
364 365 8.561738 AATACGAATTTATGGTCACTCAACTT 57.438 30.769 0.00 0.00 0.00 2.66
365 366 8.561738 AAATACGAATTTATGGTCACTCAACT 57.438 30.769 0.00 0.00 33.45 3.16
366 367 9.620660 AAAAATACGAATTTATGGTCACTCAAC 57.379 29.630 0.00 0.00 34.12 3.18
411 412 7.229306 AGTCATAAAACTTGCTCTGAATGTTCA 59.771 33.333 0.00 0.00 35.57 3.18
412 413 7.588512 AGTCATAAAACTTGCTCTGAATGTTC 58.411 34.615 0.00 0.00 0.00 3.18
413 414 7.516198 AGTCATAAAACTTGCTCTGAATGTT 57.484 32.000 0.00 0.00 0.00 2.71
414 415 6.128445 CGAGTCATAAAACTTGCTCTGAATGT 60.128 38.462 0.00 0.00 0.00 2.71
415 416 6.128445 ACGAGTCATAAAACTTGCTCTGAATG 60.128 38.462 0.00 0.00 34.50 2.67
416 417 5.934625 ACGAGTCATAAAACTTGCTCTGAAT 59.065 36.000 0.00 0.00 34.50 2.57
417 418 5.177511 CACGAGTCATAAAACTTGCTCTGAA 59.822 40.000 0.00 0.00 34.50 3.02
418 419 4.686091 CACGAGTCATAAAACTTGCTCTGA 59.314 41.667 0.00 0.00 34.50 3.27
419 420 4.686091 TCACGAGTCATAAAACTTGCTCTG 59.314 41.667 0.00 0.00 34.50 3.35
420 421 4.883083 TCACGAGTCATAAAACTTGCTCT 58.117 39.130 0.00 0.00 34.50 4.09
421 422 5.348724 TCATCACGAGTCATAAAACTTGCTC 59.651 40.000 0.00 0.00 34.50 4.26
422 423 5.237815 TCATCACGAGTCATAAAACTTGCT 58.762 37.500 0.00 0.00 34.50 3.91
423 424 5.530519 TCATCACGAGTCATAAAACTTGC 57.469 39.130 0.00 0.00 34.50 4.01
426 427 9.477484 GGTAATATCATCACGAGTCATAAAACT 57.523 33.333 0.00 0.00 0.00 2.66
427 428 9.477484 AGGTAATATCATCACGAGTCATAAAAC 57.523 33.333 0.00 0.00 0.00 2.43
428 429 9.692749 GAGGTAATATCATCACGAGTCATAAAA 57.307 33.333 0.00 0.00 0.00 1.52
429 430 9.078990 AGAGGTAATATCATCACGAGTCATAAA 57.921 33.333 0.00 0.00 0.00 1.40
430 431 8.637196 AGAGGTAATATCATCACGAGTCATAA 57.363 34.615 0.00 0.00 0.00 1.90
431 432 9.734984 TTAGAGGTAATATCATCACGAGTCATA 57.265 33.333 0.00 0.00 0.00 2.15
432 433 8.637196 TTAGAGGTAATATCATCACGAGTCAT 57.363 34.615 0.00 0.00 0.00 3.06
433 434 8.350722 GTTTAGAGGTAATATCATCACGAGTCA 58.649 37.037 0.00 0.00 0.00 3.41
434 435 8.569641 AGTTTAGAGGTAATATCATCACGAGTC 58.430 37.037 0.00 0.00 0.00 3.36
435 436 8.466617 AGTTTAGAGGTAATATCATCACGAGT 57.533 34.615 0.00 0.00 0.00 4.18
447 448 8.570488 CGGTTTTGGTTTTAGTTTAGAGGTAAT 58.430 33.333 0.00 0.00 0.00 1.89
448 449 7.555914 ACGGTTTTGGTTTTAGTTTAGAGGTAA 59.444 33.333 0.00 0.00 0.00 2.85
449 450 7.053498 ACGGTTTTGGTTTTAGTTTAGAGGTA 58.947 34.615 0.00 0.00 0.00 3.08
450 451 5.887598 ACGGTTTTGGTTTTAGTTTAGAGGT 59.112 36.000 0.00 0.00 0.00 3.85
451 452 6.381481 ACGGTTTTGGTTTTAGTTTAGAGG 57.619 37.500 0.00 0.00 0.00 3.69
452 453 6.432936 GGACGGTTTTGGTTTTAGTTTAGAG 58.567 40.000 0.00 0.00 0.00 2.43
453 454 5.299028 GGGACGGTTTTGGTTTTAGTTTAGA 59.701 40.000 0.00 0.00 0.00 2.10
470 471 0.734309 GAAACGTTTGTTGGGACGGT 59.266 50.000 20.10 0.00 41.62 4.83
475 476 1.206115 GCTGCGAAACGTTTGTTGGG 61.206 55.000 20.10 5.83 38.62 4.12
541 542 0.734942 CGTACCGGCACATCTTTCGT 60.735 55.000 0.00 0.00 0.00 3.85
545 546 0.179119 GCTACGTACCGGCACATCTT 60.179 55.000 0.00 0.00 0.00 2.40
578 579 1.441016 GCGCGCCTGAAAGTGAAAG 60.441 57.895 23.24 0.00 0.00 2.62
593 594 2.517450 GCGTCAGTATCACCTGCGC 61.517 63.158 0.00 0.00 44.27 6.09
600 601 3.738982 CCCCAAATATGCGTCAGTATCA 58.261 45.455 0.00 0.00 0.00 2.15
667 839 2.758423 ACGTATCATACCAGCAGTGTCA 59.242 45.455 0.00 0.00 0.00 3.58
678 850 0.497265 GTCGCACGCACGTATCATAC 59.503 55.000 0.00 0.00 0.00 2.39
680 852 1.876714 GGTCGCACGCACGTATCAT 60.877 57.895 0.00 0.00 0.00 2.45
681 853 2.505337 GGTCGCACGCACGTATCA 60.505 61.111 0.00 0.00 0.00 2.15
682 854 3.252484 GGGTCGCACGCACGTATC 61.252 66.667 0.00 0.00 0.00 2.24
722 894 2.559668 TGGAGGGTCAACGTAGTACTTG 59.440 50.000 0.00 0.00 45.00 3.16
765 940 8.994170 ACTAGCTTTGAGATAACTTGAAGAAAC 58.006 33.333 0.00 0.00 0.00 2.78
857 1033 2.633657 CACAATGATAGCGCCCGC 59.366 61.111 2.29 4.20 42.33 6.13
895 1076 3.449377 GGAGAGGGACAAGGAGTTTAGAG 59.551 52.174 0.00 0.00 0.00 2.43
925 1106 3.266772 AGCAATGGAAGATTGTGGAGGTA 59.733 43.478 0.00 0.00 0.00 3.08
954 1135 5.416639 TGGATGGAAGATTGTGTGATCTTTG 59.583 40.000 2.07 0.00 44.27 2.77
1096 1277 0.107831 CAGTGGGAAGGAACGTTGGA 59.892 55.000 5.00 0.00 0.00 3.53
1479 1660 2.868583 CCCAGTATCAGCAAGATTCACG 59.131 50.000 0.00 0.00 38.19 4.35
1503 1684 3.320256 CCATCACATCGAAGAGGATCAGA 59.680 47.826 0.00 0.00 43.16 3.27
1548 1729 2.181021 GTGTCGGTAGGGTGCTCG 59.819 66.667 0.00 0.00 0.00 5.03
1785 1966 4.250464 CTCGTAACAAGGAAATGTAGGCA 58.750 43.478 0.00 0.00 32.02 4.75
1858 2039 3.812611 TGGCCATGGCAGTGATATATT 57.187 42.857 36.56 0.00 44.11 1.28
1863 2044 0.260816 AAGATGGCCATGGCAGTGAT 59.739 50.000 36.56 21.89 42.43 3.06
1866 2047 0.395311 CTGAAGATGGCCATGGCAGT 60.395 55.000 36.56 24.54 42.43 4.40
1923 2104 0.733150 GACCGTTCCAGCCATAAAGC 59.267 55.000 0.00 0.00 0.00 3.51
1955 2136 4.081862 CCACATTCAGAACATCAGCCAAAT 60.082 41.667 0.00 0.00 0.00 2.32
2053 2234 6.380079 AAGTATGTCTCCAGAATTTCCAGT 57.620 37.500 0.00 0.00 0.00 4.00
2060 2241 5.046591 TGACGGAAAAGTATGTCTCCAGAAT 60.047 40.000 0.00 0.00 32.64 2.40
2072 2253 4.501071 GTTATCCAGCTGACGGAAAAGTA 58.499 43.478 17.39 0.00 35.77 2.24
2092 2273 1.339727 GCCCAGATTAGGTTGTCGGTT 60.340 52.381 0.00 0.00 0.00 4.44
2117 2298 0.764369 AGACAGTGGAGTTGCTGGGA 60.764 55.000 0.00 0.00 37.07 4.37
2152 2333 0.883833 AGAGGCAAAAGCCGTTGATG 59.116 50.000 0.19 0.00 34.52 3.07
2200 2381 6.814043 TCTCTTCATCAGTAGTCCAATCATG 58.186 40.000 0.00 0.00 0.00 3.07
2277 2458 6.306987 AGAACCATAGGAGTCATTTTGTTGT 58.693 36.000 0.00 0.00 0.00 3.32
2280 2461 6.306987 ACAAGAACCATAGGAGTCATTTTGT 58.693 36.000 0.00 0.00 0.00 2.83
2292 2473 6.057533 TGGCATCAGATAACAAGAACCATAG 58.942 40.000 0.00 0.00 0.00 2.23
2331 2512 5.122707 TGGTTCCTGGTTCATAATGCATA 57.877 39.130 0.00 0.00 0.00 3.14
2340 2521 4.879295 ATATCCAATGGTTCCTGGTTCA 57.121 40.909 0.00 0.00 34.11 3.18
2341 2522 7.839680 AATTATATCCAATGGTTCCTGGTTC 57.160 36.000 0.00 0.00 34.11 3.62
2346 2527 9.247861 GCAGATAAATTATATCCAATGGTTCCT 57.752 33.333 0.00 0.00 0.00 3.36
2364 2545 6.756299 TGCACTTTGATGTATGCAGATAAA 57.244 33.333 0.00 0.00 42.92 1.40
2403 2584 3.457610 TTCAAACCTTTACTCGACGGT 57.542 42.857 0.00 0.00 0.00 4.83
2406 2587 4.742438 TGCATTCAAACCTTTACTCGAC 57.258 40.909 0.00 0.00 0.00 4.20
2418 2599 4.039004 ACATGGTAAGCAGTTGCATTCAAA 59.961 37.500 6.90 0.00 45.16 2.69
2463 2644 1.066286 AGAAGGAGCACACAGATGAGC 60.066 52.381 0.00 0.00 42.24 4.26
2472 2653 4.356405 TTTGATGAAGAGAAGGAGCACA 57.644 40.909 0.00 0.00 0.00 4.57
2496 2677 0.822164 GCATCCTCTTTGCCATTGCT 59.178 50.000 0.00 0.00 38.71 3.91
2502 2683 1.101331 CCTCTTGCATCCTCTTTGCC 58.899 55.000 0.00 0.00 39.39 4.52
2523 2704 4.520492 CCAGGAATCCCTTTAAATGGATCG 59.480 45.833 21.11 12.18 42.02 3.69
2529 2710 4.226384 GCATCCCAGGAATCCCTTTAAAT 58.774 43.478 0.00 0.00 42.02 1.40
2608 2789 1.188863 CCAAATCCTCCTTGCCCAAG 58.811 55.000 1.05 1.05 38.14 3.61
2610 2791 0.039618 GACCAAATCCTCCTTGCCCA 59.960 55.000 0.00 0.00 0.00 5.36
2640 2821 3.297134 TTGACACTTCCAAGCTTTCCT 57.703 42.857 0.00 0.00 0.00 3.36
2646 2827 2.802247 GGCAATTTTGACACTTCCAAGC 59.198 45.455 0.00 0.00 35.83 4.01
2654 2835 4.447389 AGCATTTAACGGCAATTTTGACAC 59.553 37.500 0.00 0.00 35.35 3.67
2724 2905 3.513680 TGATGAATGCTGCCAATTGTC 57.486 42.857 4.43 0.00 0.00 3.18
2751 2932 8.079211 AGCAGTAACCTATCAATCTAACAAGA 57.921 34.615 0.00 0.00 0.00 3.02
2764 2945 5.355350 GCAATTTGTCAGAGCAGTAACCTAT 59.645 40.000 0.00 0.00 0.00 2.57
2778 2959 3.282021 GAGGAGCCTATGCAATTTGTCA 58.718 45.455 0.00 0.00 41.13 3.58
2799 2980 3.745332 TTGCTCATGTGCTCATAAACG 57.255 42.857 19.60 0.00 32.47 3.60
2811 2992 2.995283 TCCAGAGAACCATTGCTCATG 58.005 47.619 0.00 0.00 33.62 3.07
2817 2998 7.002879 AGATCCATTTATCCAGAGAACCATTG 58.997 38.462 0.00 0.00 0.00 2.82
2821 3002 6.595682 TGAAGATCCATTTATCCAGAGAACC 58.404 40.000 0.00 0.00 0.00 3.62
2958 3139 6.296662 GGAGGATATTTCCAGGCTTGATATCA 60.297 42.308 14.19 0.00 45.30 2.15
3114 3295 7.506114 TGTAGATATCGGCCTTTTCAGTAATT 58.494 34.615 0.00 0.00 0.00 1.40
3177 3358 8.150945 TCAGGCTTAGTATCATCCAGTATTTTC 58.849 37.037 0.00 0.00 0.00 2.29
3234 3415 5.082425 ACTTGCCCAATCTTGATTTTCTCT 58.918 37.500 0.00 0.00 0.00 3.10
3255 3436 5.970289 TGATTCTCCACTATATCCAGGACT 58.030 41.667 0.00 0.00 0.00 3.85
3294 3475 7.435488 ACTTCTATAATCACTGCACGATGTAAC 59.565 37.037 0.00 0.00 0.00 2.50
3301 3482 7.930513 TGATTACTTCTATAATCACTGCACG 57.069 36.000 4.48 0.00 43.46 5.34
3308 3489 8.962884 TGCAAGCTTGATTACTTCTATAATCA 57.037 30.769 30.39 9.21 45.53 2.57
3312 3493 7.708322 CAGACTGCAAGCTTGATTACTTCTATA 59.292 37.037 30.39 0.25 37.60 1.31
3314 3495 5.871524 CAGACTGCAAGCTTGATTACTTCTA 59.128 40.000 30.39 3.16 37.60 2.10
3351 3532 2.280797 GGTCGCTTGGTGCACTCA 60.281 61.111 17.98 10.37 43.06 3.41
3400 3581 1.242076 GCTTCTGTGTCCATTGCACT 58.758 50.000 0.00 0.00 37.70 4.40
3417 3598 3.951775 CTAGTTGTCTCAGAACTGGCT 57.048 47.619 1.93 0.00 35.30 4.75
3421 3608 4.402829 TCTCTGCTAGTTGTCTCAGAACT 58.597 43.478 0.00 0.00 35.44 3.01
3456 3643 2.892425 GACAGCGGGGATGAAGCG 60.892 66.667 0.00 0.00 35.78 4.68
3483 3670 3.151554 AGCATTTCATCTTGCTGACACA 58.848 40.909 0.00 0.00 46.96 3.72
3494 3681 8.668510 TCCTACATTCTCTAAAGCATTTCATC 57.331 34.615 0.00 0.00 40.09 2.92
3496 3683 7.851228 TCTCCTACATTCTCTAAAGCATTTCA 58.149 34.615 0.00 0.00 40.09 2.69
3497 3684 8.723942 TTCTCCTACATTCTCTAAAGCATTTC 57.276 34.615 0.00 0.00 40.09 2.17
3525 3718 9.928236 GTTGCAATATAATCTCAAAGAGTCTTC 57.072 33.333 5.70 0.00 0.00 2.87
3526 3719 9.678260 AGTTGCAATATAATCTCAAAGAGTCTT 57.322 29.630 0.59 0.00 0.00 3.01
3540 3733 7.465379 GCGAGTCACACAATAGTTGCAATATAA 60.465 37.037 0.59 0.00 0.00 0.98
3541 3734 6.019075 GCGAGTCACACAATAGTTGCAATATA 60.019 38.462 0.59 0.00 0.00 0.86
3548 3741 4.732285 AAAGCGAGTCACACAATAGTTG 57.268 40.909 0.00 0.00 0.00 3.16
3561 3754 9.874215 GTTAAGAAACAAAACTATAAAGCGAGT 57.126 29.630 0.00 0.00 35.56 4.18
3616 3810 7.099120 GCTTTTGTGAATTATGGGTCAAGAAT 58.901 34.615 0.00 0.00 0.00 2.40
3625 3819 7.010738 CCTGCTATTTGCTTTTGTGAATTATGG 59.989 37.037 0.00 0.00 43.37 2.74
3627 3821 7.761249 GTCCTGCTATTTGCTTTTGTGAATTAT 59.239 33.333 0.00 0.00 43.37 1.28
3629 3823 5.928264 GTCCTGCTATTTGCTTTTGTGAATT 59.072 36.000 0.00 0.00 43.37 2.17
3631 3825 4.340666 TGTCCTGCTATTTGCTTTTGTGAA 59.659 37.500 0.00 0.00 43.37 3.18
3657 3856 8.887393 ACAGAAAGGGAAATTAAACTACCTCTA 58.113 33.333 0.00 0.00 0.00 2.43
3659 3858 7.997773 ACAGAAAGGGAAATTAAACTACCTC 57.002 36.000 0.00 0.00 0.00 3.85
3674 3873 4.642885 TGTTAGTGTGGAAAACAGAAAGGG 59.357 41.667 0.00 0.00 40.26 3.95
3677 3876 6.767524 ACATGTTAGTGTGGAAAACAGAAA 57.232 33.333 0.00 0.00 40.26 2.52
3696 3895 8.712363 AGTTAGCAGCGAAATACATAATACATG 58.288 33.333 0.00 0.00 0.00 3.21
3815 4140 9.139174 CGGAAATACATTGTAAGAATTTGCTTT 57.861 29.630 0.00 0.00 0.00 3.51
3822 4148 9.226606 TCAAACTCGGAAATACATTGTAAGAAT 57.773 29.630 0.00 0.00 0.00 2.40
3920 4246 3.953853 CGTTTTACATGCGTCGATTGATC 59.046 43.478 0.00 0.00 0.00 2.92
3929 4255 4.024387 ACAATCTGTTCGTTTTACATGCGT 60.024 37.500 0.00 0.00 0.00 5.24
3959 4285 9.178758 GTCCTTTTCCATAGTTATTTGTCAGAT 57.821 33.333 0.00 0.00 0.00 2.90
3963 4289 7.175990 TGTGGTCCTTTTCCATAGTTATTTGTC 59.824 37.037 0.00 0.00 37.30 3.18
3994 4328 3.244215 TGCCAGTCTTGAAGATCTTTCGT 60.244 43.478 9.87 0.00 0.00 3.85
4006 4340 2.426738 TGTTTGTTCCTTGCCAGTCTTG 59.573 45.455 0.00 0.00 0.00 3.02
4042 4376 6.150976 TGGCTTTCATAGTTGGTTATCTGTTG 59.849 38.462 0.00 0.00 0.00 3.33
4047 4381 5.507985 GGCATGGCTTTCATAGTTGGTTATC 60.508 44.000 12.86 0.00 34.12 1.75
4053 4387 5.163530 TGTTATGGCATGGCTTTCATAGTTG 60.164 40.000 21.08 0.00 34.12 3.16
4079 4413 3.577805 TTAGGAAGGGGAAATAGCTGC 57.422 47.619 0.00 0.00 0.00 5.25
4120 4454 1.677576 CATGTGGTGTCTGTTGCTTGT 59.322 47.619 0.00 0.00 0.00 3.16
4172 4519 5.005971 GCATTTTGATGTTCATATGTGGTGC 59.994 40.000 1.90 0.00 0.00 5.01
4226 4584 6.978674 TCCTTCGGATGATACATAAGAACT 57.021 37.500 0.00 0.00 0.00 3.01
4243 4601 2.095372 GGCGAACCTATTTGTTCCTTCG 59.905 50.000 0.00 0.00 41.24 3.79
4251 4609 5.309323 TGAAAAGATGGCGAACCTATTTG 57.691 39.130 0.00 0.00 36.63 2.32
4261 4619 3.820689 TCGAATTGTTGAAAAGATGGCG 58.179 40.909 0.00 0.00 0.00 5.69
4280 4638 0.875059 GTCTTTGGTTTGCTCCCTCG 59.125 55.000 0.00 0.00 0.00 4.63
4292 4650 6.456988 GCGGTACAGATCTTTTATGTCTTTGG 60.457 42.308 0.00 0.00 0.00 3.28
4299 4657 5.794687 TGTTGCGGTACAGATCTTTTATG 57.205 39.130 0.00 0.00 0.00 1.90
4357 4715 4.274214 TGATGTCTTCACAAAACTGCTCAG 59.726 41.667 0.00 0.00 35.64 3.35
4392 4751 1.132453 GCGAACCCCATACTGCTTTTC 59.868 52.381 0.00 0.00 0.00 2.29
4407 4766 9.010366 GGTCTGAATTTATTTAGATTTGCGAAC 57.990 33.333 1.01 0.00 35.32 3.95
4443 4802 9.599866 ACTAATGATTGAAATTCGACTGTATGA 57.400 29.630 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.