Multiple sequence alignment - TraesCS2D01G426600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G426600 chr2D 100.000 5596 0 0 1 5596 538795288 538800883 0.000000e+00 10334.0
1 TraesCS2D01G426600 chr2A 91.524 2277 104 19 2830 5051 681246131 681248373 0.000000e+00 3053.0
2 TraesCS2D01G426600 chr2A 86.405 2545 174 70 6 2497 681243374 681245799 0.000000e+00 2625.0
3 TraesCS2D01G426600 chr2A 94.118 306 14 2 5292 5593 681249872 681250177 3.950000e-126 462.0
4 TraesCS2D01G426600 chr2A 79.503 161 15 8 2673 2817 681245909 681246067 1.280000e-16 99.0
5 TraesCS2D01G426600 chr2B 87.621 1648 134 35 454 2081 641939283 641940880 0.000000e+00 1849.0
6 TraesCS2D01G426600 chr2B 91.773 1337 62 25 2584 3912 641941438 641942734 0.000000e+00 1816.0
7 TraesCS2D01G426600 chr2B 94.501 782 37 3 4002 4780 641942754 641943532 0.000000e+00 1201.0
8 TraesCS2D01G426600 chr2B 93.473 429 16 6 2061 2488 641940896 641941313 1.320000e-175 627.0
9 TraesCS2D01G426600 chr2B 96.393 305 8 1 5292 5593 641945279 641945583 3.010000e-137 499.0
10 TraesCS2D01G426600 chr2B 86.159 289 27 5 4781 5065 641944929 641945208 3.280000e-77 300.0
11 TraesCS2D01G426600 chr2B 90.086 232 15 3 1 227 641937374 641937602 1.520000e-75 294.0
12 TraesCS2D01G426600 chr2B 90.230 174 13 1 278 447 641937601 641937774 2.030000e-54 224.0
13 TraesCS2D01G426600 chr5D 83.125 320 49 3 384 699 23089398 23089080 2.550000e-73 287.0
14 TraesCS2D01G426600 chr5B 82.555 321 50 4 384 699 16435859 16435540 1.540000e-70 278.0
15 TraesCS2D01G426600 chr5B 81.250 320 51 7 384 698 16818168 16817853 3.350000e-62 250.0
16 TraesCS2D01G426600 chr5B 80.938 320 51 8 384 698 16735301 16734987 1.560000e-60 244.0
17 TraesCS2D01G426600 chr5A 79.433 282 47 9 424 698 17019968 17019691 7.400000e-44 189.0
18 TraesCS2D01G426600 chr6D 78.723 94 12 5 2501 2586 441969728 441969821 7.830000e-04 56.5
19 TraesCS2D01G426600 chr6D 90.476 42 2 2 2545 2586 427496553 427496592 3.000000e-03 54.7
20 TraesCS2D01G426600 chr3D 96.875 32 0 1 2554 2585 7123271 7123301 1.000000e-02 52.8
21 TraesCS2D01G426600 chr1A 100.000 28 0 0 2559 2586 25485752 25485779 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G426600 chr2D 538795288 538800883 5595 False 10334.00 10334 100.0000 1 5596 1 chr2D.!!$F1 5595
1 TraesCS2D01G426600 chr2A 681243374 681250177 6803 False 1559.75 3053 87.8875 6 5593 4 chr2A.!!$F1 5587
2 TraesCS2D01G426600 chr2B 641937374 641945583 8209 False 851.25 1849 91.2795 1 5593 8 chr2B.!!$F1 5592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
845 2365 0.029681 ATGTGCCTATGAGGGGGAGT 60.030 55.0 0.0 0.0 35.37 3.85 F
1838 3397 0.101759 TTCCTCCGATTTCGCTACCG 59.898 55.0 0.0 0.0 38.18 4.02 F
2659 4299 0.034059 AAATCAGATAGGGGCGAGCG 59.966 55.0 0.0 0.0 0.00 5.03 F
3589 5342 0.034670 AGAGGATTGAACAGCAGGGC 60.035 55.0 0.0 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2640 4280 0.034059 CGCTCGCCCCTATCTGATTT 59.966 55.0 0.00 0.0 0.0 2.17 R
2934 4662 0.107752 TGCTGCACTCTGTCACACAA 60.108 50.0 0.00 0.0 0.0 3.33 R
4040 5797 0.108585 TTCTTTTCAGAGCGCAGGGT 59.891 50.0 11.47 0.0 0.0 4.34 R
5222 9829 0.034059 CTACATCATCTCCACGCCCC 59.966 60.0 0.00 0.0 0.0 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.201609 CGCTTATGCCAATAAAAGACTAAGTGA 60.202 37.037 0.00 0.00 35.36 3.41
37 38 4.640771 AAAGACTAAGTGATGGCTCCAA 57.359 40.909 0.00 0.00 0.00 3.53
42 43 2.226962 AAGTGATGGCTCCAAATGCT 57.773 45.000 0.00 0.00 0.00 3.79
47 48 1.869767 GATGGCTCCAAATGCTAGTCG 59.130 52.381 0.00 0.00 0.00 4.18
227 234 5.719085 ACCCTTTTTATCCATGTGCATGTTA 59.281 36.000 10.76 0.21 37.11 2.41
258 265 1.490693 GGCGTGCCATGTCGACTATG 61.491 60.000 17.92 16.97 35.81 2.23
274 281 4.386049 CGACTATGTGTTCTTCAACCACTC 59.614 45.833 0.00 0.00 0.00 3.51
336 343 8.047310 CCTCTGGTATGTCTAGTTGGTTAATTT 58.953 37.037 0.00 0.00 0.00 1.82
339 346 6.943146 TGGTATGTCTAGTTGGTTAATTTGCA 59.057 34.615 0.00 0.00 0.00 4.08
349 356 3.007398 TGGTTAATTTGCACCATCCAACC 59.993 43.478 11.37 11.37 38.20 3.77
353 360 1.047002 TTTGCACCATCCAACCCAAG 58.953 50.000 0.00 0.00 0.00 3.61
370 377 2.224281 CCAAGTAGAAGTGCACACTCCA 60.224 50.000 21.04 0.97 41.58 3.86
374 381 1.123077 AGAAGTGCACACTCCACTCA 58.877 50.000 21.04 0.00 42.37 3.41
420 431 4.202080 CCGGTTTCGAATGTAGATAGTCCA 60.202 45.833 0.00 0.00 39.00 4.02
431 442 6.313519 TGTAGATAGTCCATGCCTTTTTCT 57.686 37.500 0.00 0.00 0.00 2.52
470 1983 2.879103 TCAAACCCACAGGAAGGATC 57.121 50.000 0.00 0.00 36.73 3.36
520 2033 3.928727 TGTCGTCGTAAAGAGTTCCAT 57.071 42.857 0.00 0.00 0.00 3.41
524 2037 5.176223 TGTCGTCGTAAAGAGTTCCATTTTC 59.824 40.000 0.00 0.00 0.00 2.29
548 2061 3.186909 GGACCAAAGTTGCACAGTTTTC 58.813 45.455 0.00 0.00 0.00 2.29
549 2062 3.186909 GACCAAAGTTGCACAGTTTTCC 58.813 45.455 0.00 0.00 0.00 3.13
619 2133 4.078537 TGCAACCATATACTTGCACTTGT 58.921 39.130 12.91 0.00 46.07 3.16
650 2164 9.116080 TCATCTAAATATCCAACATGGTCCTAT 57.884 33.333 0.00 0.00 39.03 2.57
653 2167 8.944138 TCTAAATATCCAACATGGTCCTATCAA 58.056 33.333 0.00 0.00 39.03 2.57
658 2172 3.691118 CCAACATGGTCCTATCAACACTG 59.309 47.826 0.00 0.00 31.35 3.66
659 2173 4.326826 CAACATGGTCCTATCAACACTGT 58.673 43.478 0.00 0.00 0.00 3.55
677 2191 3.987868 ACTGTTACTATGTGTTGTCAGCG 59.012 43.478 0.00 0.00 0.00 5.18
678 2192 3.985008 TGTTACTATGTGTTGTCAGCGT 58.015 40.909 0.00 0.00 0.00 5.07
703 2217 1.049289 GGGAGATGCGTCCTAAGGGT 61.049 60.000 1.23 0.00 36.75 4.34
713 2227 3.322828 GCGTCCTAAGGGTATATCCAACA 59.677 47.826 4.46 0.00 38.11 3.33
717 2231 2.256117 AAGGGTATATCCAACAGCGC 57.744 50.000 4.46 0.00 38.11 5.92
720 2234 2.092646 AGGGTATATCCAACAGCGCAAA 60.093 45.455 11.47 0.00 38.11 3.68
743 2257 3.059325 GCAAATCAGACGCACTATCCATC 60.059 47.826 0.00 0.00 0.00 3.51
747 2261 0.753262 AGACGCACTATCCATCCACC 59.247 55.000 0.00 0.00 0.00 4.61
760 2274 0.250295 ATCCACCAACACGTCCACAG 60.250 55.000 0.00 0.00 0.00 3.66
790 2306 1.866483 ATGAGCTGGCCATCCAACCA 61.866 55.000 5.51 0.00 42.91 3.67
794 2310 1.669999 GCTGGCCATCCAACCATGTC 61.670 60.000 5.51 0.00 42.91 3.06
802 2318 0.698238 TCCAACCATGTCCCTCAAGG 59.302 55.000 0.00 0.00 40.36 3.61
845 2365 0.029681 ATGTGCCTATGAGGGGGAGT 60.030 55.000 0.00 0.00 35.37 3.85
852 2372 0.561184 TATGAGGGGGAGTGATCGGT 59.439 55.000 0.00 0.00 0.00 4.69
882 2402 2.124151 GGCACCTCCGGCAATCAT 60.124 61.111 0.00 0.00 0.00 2.45
896 2416 2.029728 GCAATCATCTCTTTGACGTCCG 59.970 50.000 14.12 1.48 0.00 4.79
935 2455 6.493458 CCAAAGAAGGAAAGAAAATGGTAGGA 59.507 38.462 0.00 0.00 0.00 2.94
967 2490 2.585247 GCCTCGACCATGTACCGC 60.585 66.667 0.00 0.00 0.00 5.68
1011 2536 1.531739 GGGGCGCAATGAACCAAAGA 61.532 55.000 10.83 0.00 0.00 2.52
1100 2625 2.202783 GCATTGCCATTGCCGGTC 60.203 61.111 1.90 0.00 36.33 4.79
1116 2641 2.027024 TCGATCCGCCGATTTCCG 59.973 61.111 0.00 0.00 33.14 4.30
1132 2657 4.150454 CGCCCTCCTCCTCCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
1133 2658 2.123033 GCCCTCCTCCTCCTCCTC 60.123 72.222 0.00 0.00 0.00 3.71
1177 2702 4.699735 ACCACAAATGCTACAATCATCGAA 59.300 37.500 0.00 0.00 0.00 3.71
1178 2703 5.030295 CCACAAATGCTACAATCATCGAAC 58.970 41.667 0.00 0.00 0.00 3.95
1179 2704 5.030295 CACAAATGCTACAATCATCGAACC 58.970 41.667 0.00 0.00 0.00 3.62
1180 2705 4.201812 ACAAATGCTACAATCATCGAACCG 60.202 41.667 0.00 0.00 0.00 4.44
1181 2706 2.951457 TGCTACAATCATCGAACCGA 57.049 45.000 0.00 0.00 41.13 4.69
1182 2707 2.809446 TGCTACAATCATCGAACCGAG 58.191 47.619 0.00 0.00 39.91 4.63
1183 2708 1.523095 GCTACAATCATCGAACCGAGC 59.477 52.381 0.00 0.00 39.91 5.03
1184 2709 2.809446 CTACAATCATCGAACCGAGCA 58.191 47.619 0.00 0.00 39.91 4.26
1185 2710 1.645034 ACAATCATCGAACCGAGCAG 58.355 50.000 0.00 0.00 39.91 4.24
1186 2711 0.302890 CAATCATCGAACCGAGCAGC 59.697 55.000 0.00 0.00 39.91 5.25
1187 2712 0.108186 AATCATCGAACCGAGCAGCA 60.108 50.000 0.00 0.00 39.91 4.41
1188 2713 0.108186 ATCATCGAACCGAGCAGCAA 60.108 50.000 0.00 0.00 39.91 3.91
1338 2887 3.941704 ACCCAAAAGATCTCTCCATCC 57.058 47.619 0.00 0.00 0.00 3.51
1480 3036 3.777925 CGGCGGTTGCTCGTTCTG 61.778 66.667 0.00 0.00 42.25 3.02
1622 3178 5.071788 ACATACTCAACATGATCCGGGTAAT 59.928 40.000 0.00 0.00 0.00 1.89
1628 3184 2.978978 ACATGATCCGGGTAATCATCCA 59.021 45.455 12.87 0.00 40.92 3.41
1678 3235 2.287308 CCTCTTCTCTCGGCGATTACTG 60.287 54.545 11.27 0.00 0.00 2.74
1694 3251 5.853282 CGATTACTGCAAAAGTTTCTCCTTG 59.147 40.000 0.00 0.00 40.56 3.61
1700 3257 3.372060 CAAAAGTTTCTCCTTGAACGCC 58.628 45.455 0.00 0.00 33.88 5.68
1701 3258 1.605753 AAGTTTCTCCTTGAACGCCC 58.394 50.000 0.00 0.00 33.88 6.13
1757 3316 4.164988 TGTTTTGGGGGTGTTTGATTGATT 59.835 37.500 0.00 0.00 0.00 2.57
1764 3323 5.186797 GGGGGTGTTTGATTGATTGAATACA 59.813 40.000 0.00 0.00 0.00 2.29
1787 3346 1.328279 GAGAGGTTTGGTTGGGTTGG 58.672 55.000 0.00 0.00 0.00 3.77
1788 3347 0.634465 AGAGGTTTGGTTGGGTTGGT 59.366 50.000 0.00 0.00 0.00 3.67
1789 3348 1.007842 AGAGGTTTGGTTGGGTTGGTT 59.992 47.619 0.00 0.00 0.00 3.67
1790 3349 1.138069 GAGGTTTGGTTGGGTTGGTTG 59.862 52.381 0.00 0.00 0.00 3.77
1791 3350 0.462937 GGTTTGGTTGGGTTGGTTGC 60.463 55.000 0.00 0.00 0.00 4.17
1792 3351 0.808060 GTTTGGTTGGGTTGGTTGCG 60.808 55.000 0.00 0.00 0.00 4.85
1793 3352 1.258445 TTTGGTTGGGTTGGTTGCGT 61.258 50.000 0.00 0.00 0.00 5.24
1794 3353 1.258445 TTGGTTGGGTTGGTTGCGTT 61.258 50.000 0.00 0.00 0.00 4.84
1795 3354 1.227118 GGTTGGGTTGGTTGCGTTG 60.227 57.895 0.00 0.00 0.00 4.10
1812 3371 0.319469 TTGATCTGCGCGTGAACTCA 60.319 50.000 8.43 5.77 0.00 3.41
1813 3372 1.008875 TGATCTGCGCGTGAACTCAC 61.009 55.000 8.43 0.00 43.15 3.51
1822 3381 2.719046 CGCGTGAACTCACAAAAATTCC 59.281 45.455 10.32 0.00 46.75 3.01
1835 3394 4.698304 ACAAAAATTCCTCCGATTTCGCTA 59.302 37.500 0.00 0.00 38.18 4.26
1838 3397 0.101759 TTCCTCCGATTTCGCTACCG 59.898 55.000 0.00 0.00 38.18 4.02
1839 3398 0.749091 TCCTCCGATTTCGCTACCGA 60.749 55.000 0.00 0.00 42.66 4.69
1849 3408 1.352114 TCGCTACCGAAAATCAACCG 58.648 50.000 0.00 0.00 41.17 4.44
1850 3409 1.073177 CGCTACCGAAAATCAACCGT 58.927 50.000 0.00 0.00 36.29 4.83
1853 3412 3.241868 CGCTACCGAAAATCAACCGTTAG 60.242 47.826 0.00 0.00 36.29 2.34
1854 3413 3.484721 GCTACCGAAAATCAACCGTTAGC 60.485 47.826 0.00 0.00 37.21 3.09
1855 3414 2.774687 ACCGAAAATCAACCGTTAGCT 58.225 42.857 0.00 0.00 0.00 3.32
1856 3415 3.929094 ACCGAAAATCAACCGTTAGCTA 58.071 40.909 0.00 0.00 0.00 3.32
1857 3416 3.681417 ACCGAAAATCAACCGTTAGCTAC 59.319 43.478 0.00 0.00 0.00 3.58
1858 3417 3.930848 CCGAAAATCAACCGTTAGCTACT 59.069 43.478 0.00 0.00 0.00 2.57
1859 3418 5.104374 CCGAAAATCAACCGTTAGCTACTA 58.896 41.667 0.00 0.00 0.00 1.82
1860 3419 5.005107 CCGAAAATCAACCGTTAGCTACTAC 59.995 44.000 0.00 0.00 0.00 2.73
1861 3420 5.803967 CGAAAATCAACCGTTAGCTACTACT 59.196 40.000 0.00 0.00 0.00 2.57
1862 3421 6.020837 CGAAAATCAACCGTTAGCTACTACTC 60.021 42.308 0.00 0.00 0.00 2.59
1863 3422 4.548991 ATCAACCGTTAGCTACTACTCG 57.451 45.455 0.00 0.00 0.00 4.18
1864 3423 3.338249 TCAACCGTTAGCTACTACTCGT 58.662 45.455 0.00 0.00 0.00 4.18
1865 3424 4.503910 TCAACCGTTAGCTACTACTCGTA 58.496 43.478 0.00 0.00 0.00 3.43
1866 3425 4.330074 TCAACCGTTAGCTACTACTCGTAC 59.670 45.833 0.00 0.00 0.00 3.67
1867 3426 2.860735 ACCGTTAGCTACTACTCGTACG 59.139 50.000 9.53 9.53 0.00 3.67
1868 3427 2.860735 CCGTTAGCTACTACTCGTACGT 59.139 50.000 16.05 0.00 0.00 3.57
1869 3428 4.042398 CCGTTAGCTACTACTCGTACGTA 58.958 47.826 16.05 0.00 0.00 3.57
1870 3429 4.085517 CCGTTAGCTACTACTCGTACGTAC 60.086 50.000 15.90 15.90 0.00 3.67
1871 3430 4.499399 CGTTAGCTACTACTCGTACGTACA 59.501 45.833 24.50 11.30 0.00 2.90
1872 3431 5.004440 CGTTAGCTACTACTCGTACGTACAA 59.996 44.000 24.50 6.33 0.00 2.41
1873 3432 6.291849 CGTTAGCTACTACTCGTACGTACAAT 60.292 42.308 24.50 11.78 0.00 2.71
1874 3433 5.649602 AGCTACTACTCGTACGTACAATC 57.350 43.478 24.50 0.00 0.00 2.67
1875 3434 4.208047 AGCTACTACTCGTACGTACAATCG 59.792 45.833 24.50 11.39 0.00 3.34
1876 3435 3.933155 ACTACTCGTACGTACAATCGG 57.067 47.619 24.50 13.37 34.94 4.18
1877 3436 2.030946 ACTACTCGTACGTACAATCGGC 59.969 50.000 24.50 0.00 34.94 5.54
1878 3437 0.247814 ACTCGTACGTACAATCGGCG 60.248 55.000 24.50 9.60 35.81 6.46
1887 3446 1.035385 TACAATCGGCGCAGAGGAGA 61.035 55.000 16.84 2.00 0.00 3.71
1900 3459 3.452474 CAGAGGAGATTTCGAGCGATTT 58.548 45.455 0.00 0.00 0.00 2.17
1901 3460 4.611943 CAGAGGAGATTTCGAGCGATTTA 58.388 43.478 0.00 0.00 0.00 1.40
1902 3461 4.442733 CAGAGGAGATTTCGAGCGATTTAC 59.557 45.833 0.00 0.00 0.00 2.01
1904 3463 4.755411 AGGAGATTTCGAGCGATTTACAA 58.245 39.130 0.00 0.00 0.00 2.41
1906 3465 4.260253 GGAGATTTCGAGCGATTTACAACC 60.260 45.833 0.00 0.00 0.00 3.77
1907 3466 4.250464 AGATTTCGAGCGATTTACAACCA 58.750 39.130 0.00 0.00 0.00 3.67
1908 3467 3.799137 TTTCGAGCGATTTACAACCAC 57.201 42.857 0.00 0.00 0.00 4.16
1924 3483 5.051816 ACAACCACATGATTTGCTTTTCTG 58.948 37.500 0.00 0.00 0.00 3.02
1925 3484 4.942761 ACCACATGATTTGCTTTTCTGT 57.057 36.364 0.00 0.00 0.00 3.41
1933 3492 7.933033 ACATGATTTGCTTTTCTGTTTGGTTAT 59.067 29.630 0.00 0.00 0.00 1.89
1934 3493 8.776470 CATGATTTGCTTTTCTGTTTGGTTATT 58.224 29.630 0.00 0.00 0.00 1.40
1935 3494 8.729805 TGATTTGCTTTTCTGTTTGGTTATTT 57.270 26.923 0.00 0.00 0.00 1.40
1936 3495 9.171877 TGATTTGCTTTTCTGTTTGGTTATTTT 57.828 25.926 0.00 0.00 0.00 1.82
1981 3542 8.163516 CGGCGGTTAAATTAAATTTGGTAAAAG 58.836 33.333 0.00 0.00 33.82 2.27
2017 3578 2.259204 CAACCGGTGCAAGCATGG 59.741 61.111 8.52 12.84 0.00 3.66
2018 3579 2.115052 AACCGGTGCAAGCATGGA 59.885 55.556 8.52 0.00 0.00 3.41
2059 3620 6.968131 AAGCTTTGGTTTCTCAAAAAGAAC 57.032 33.333 0.00 0.00 43.75 3.01
2320 3927 1.503542 CAAGGAATCACGCACTGCC 59.496 57.895 0.00 0.00 0.00 4.85
2372 3983 2.522836 ATGAAGGCTCGTGCTCTATG 57.477 50.000 9.61 0.00 39.59 2.23
2410 4021 4.094294 GCTGGCTTATTGTGTCGATTTGTA 59.906 41.667 0.00 0.00 0.00 2.41
2411 4022 5.391523 GCTGGCTTATTGTGTCGATTTGTAA 60.392 40.000 0.00 0.00 0.00 2.41
2412 4023 6.561737 TGGCTTATTGTGTCGATTTGTAAA 57.438 33.333 0.00 0.00 0.00 2.01
2413 4024 6.971602 TGGCTTATTGTGTCGATTTGTAAAA 58.028 32.000 0.00 0.00 0.00 1.52
2447 4059 4.448060 CGACAGAGGAAGGTGTAAGTTTTC 59.552 45.833 0.00 0.00 0.00 2.29
2480 4092 1.069636 GGTCAGCTTGTTCTCGCAAAG 60.070 52.381 0.00 0.00 0.00 2.77
2484 4096 3.376859 TCAGCTTGTTCTCGCAAAGAAAA 59.623 39.130 0.38 0.00 45.50 2.29
2489 4114 1.269723 GTTCTCGCAAAGAAAAGGGGG 59.730 52.381 0.38 0.00 45.50 5.40
2490 4115 0.476771 TCTCGCAAAGAAAAGGGGGT 59.523 50.000 0.00 0.00 0.00 4.95
2491 4116 0.881796 CTCGCAAAGAAAAGGGGGTC 59.118 55.000 0.00 0.00 0.00 4.46
2492 4117 0.183971 TCGCAAAGAAAAGGGGGTCA 59.816 50.000 0.00 0.00 0.00 4.02
2493 4118 0.598065 CGCAAAGAAAAGGGGGTCAG 59.402 55.000 0.00 0.00 0.00 3.51
2496 4121 2.434336 GCAAAGAAAAGGGGGTCAGTTT 59.566 45.455 0.00 0.00 0.00 2.66
2498 4123 4.441792 CAAAGAAAAGGGGGTCAGTTTTG 58.558 43.478 0.00 0.00 0.00 2.44
2499 4124 3.398318 AGAAAAGGGGGTCAGTTTTGT 57.602 42.857 0.00 0.00 0.00 2.83
2500 4125 4.529716 AGAAAAGGGGGTCAGTTTTGTA 57.470 40.909 0.00 0.00 0.00 2.41
2501 4126 5.074746 AGAAAAGGGGGTCAGTTTTGTAT 57.925 39.130 0.00 0.00 0.00 2.29
2502 4127 5.077564 AGAAAAGGGGGTCAGTTTTGTATC 58.922 41.667 0.00 0.00 0.00 2.24
2503 4128 3.451402 AAGGGGGTCAGTTTTGTATCC 57.549 47.619 0.00 0.00 0.00 2.59
2505 4130 2.926329 AGGGGGTCAGTTTTGTATCCAT 59.074 45.455 0.00 0.00 0.00 3.41
2506 4131 4.116113 AGGGGGTCAGTTTTGTATCCATA 58.884 43.478 0.00 0.00 0.00 2.74
2507 4132 4.731929 AGGGGGTCAGTTTTGTATCCATAT 59.268 41.667 0.00 0.00 0.00 1.78
2508 4133 5.195756 AGGGGGTCAGTTTTGTATCCATATT 59.804 40.000 0.00 0.00 0.00 1.28
2510 4135 6.489022 GGGGGTCAGTTTTGTATCCATATTAC 59.511 42.308 0.00 0.00 0.00 1.89
2511 4136 7.287810 GGGGTCAGTTTTGTATCCATATTACT 58.712 38.462 0.00 0.00 0.00 2.24
2512 4137 7.444487 GGGGTCAGTTTTGTATCCATATTACTC 59.556 40.741 0.00 0.00 0.00 2.59
2513 4138 7.170998 GGGTCAGTTTTGTATCCATATTACTCG 59.829 40.741 0.00 0.00 0.00 4.18
2516 4141 7.646526 TCAGTTTTGTATCCATATTACTCGTCG 59.353 37.037 0.00 0.00 0.00 5.12
2519 4144 5.292671 TGTATCCATATTACTCGTCGCTC 57.707 43.478 0.00 0.00 0.00 5.03
2520 4145 4.758165 TGTATCCATATTACTCGTCGCTCA 59.242 41.667 0.00 0.00 0.00 4.26
2521 4146 4.848562 ATCCATATTACTCGTCGCTCAA 57.151 40.909 0.00 0.00 0.00 3.02
2522 4147 4.642445 TCCATATTACTCGTCGCTCAAA 57.358 40.909 0.00 0.00 0.00 2.69
2523 4148 4.357142 TCCATATTACTCGTCGCTCAAAC 58.643 43.478 0.00 0.00 0.00 2.93
2524 4149 3.179795 CCATATTACTCGTCGCTCAAACG 59.820 47.826 0.00 0.00 41.39 3.60
2525 4150 2.624316 ATTACTCGTCGCTCAAACGA 57.376 45.000 0.00 0.00 46.08 3.85
2531 4156 3.416119 TCGTCGCTCAAACGAATCTAT 57.584 42.857 0.00 0.00 45.36 1.98
2532 4157 3.360533 TCGTCGCTCAAACGAATCTATC 58.639 45.455 0.00 0.00 45.36 2.08
2533 4158 3.064958 TCGTCGCTCAAACGAATCTATCT 59.935 43.478 0.00 0.00 45.36 1.98
2534 4159 4.271776 TCGTCGCTCAAACGAATCTATCTA 59.728 41.667 0.00 0.00 45.36 1.98
2535 4160 4.609295 CGTCGCTCAAACGAATCTATCTAG 59.391 45.833 0.00 0.00 44.93 2.43
2537 4162 4.036380 TCGCTCAAACGAATCTATCTAGCA 59.964 41.667 0.00 0.00 39.54 3.49
2538 4163 4.147306 CGCTCAAACGAATCTATCTAGCAC 59.853 45.833 0.00 0.00 34.06 4.40
2540 4165 5.174761 GCTCAAACGAATCTATCTAGCACTG 59.825 44.000 0.00 0.00 0.00 3.66
2541 4166 6.451064 TCAAACGAATCTATCTAGCACTGA 57.549 37.500 0.00 0.00 0.00 3.41
2542 4167 6.863275 TCAAACGAATCTATCTAGCACTGAA 58.137 36.000 0.00 0.00 0.00 3.02
2545 4170 9.249457 CAAACGAATCTATCTAGCACTGAAATA 57.751 33.333 0.00 0.00 0.00 1.40
2546 4171 8.804688 AACGAATCTATCTAGCACTGAAATAC 57.195 34.615 0.00 0.00 0.00 1.89
2547 4172 7.941919 ACGAATCTATCTAGCACTGAAATACA 58.058 34.615 0.00 0.00 0.00 2.29
2549 4174 8.858186 CGAATCTATCTAGCACTGAAATACATG 58.142 37.037 0.00 0.00 0.00 3.21
2553 4178 9.574516 TCTATCTAGCACTGAAATACATGTAGA 57.425 33.333 11.91 0.41 0.00 2.59
2557 4182 9.534565 TCTAGCACTGAAATACATGTAGATTTC 57.465 33.333 20.25 20.25 40.80 2.17
2563 4188 7.234187 TGAAATACATGTAGATTTCAGCGAC 57.766 36.000 23.68 6.86 43.64 5.19
2565 4190 7.333174 TGAAATACATGTAGATTTCAGCGACAA 59.667 33.333 23.68 7.77 43.64 3.18
2567 4192 4.569943 ACATGTAGATTTCAGCGACAAGT 58.430 39.130 0.00 0.00 0.00 3.16
2568 4193 5.720202 ACATGTAGATTTCAGCGACAAGTA 58.280 37.500 0.00 0.00 0.00 2.24
2569 4194 6.163476 ACATGTAGATTTCAGCGACAAGTAA 58.837 36.000 0.00 0.00 0.00 2.24
2570 4195 6.818644 ACATGTAGATTTCAGCGACAAGTAAT 59.181 34.615 0.00 0.00 0.00 1.89
2571 4196 7.979537 ACATGTAGATTTCAGCGACAAGTAATA 59.020 33.333 0.00 0.00 0.00 0.98
2572 4197 8.982685 CATGTAGATTTCAGCGACAAGTAATAT 58.017 33.333 0.00 0.00 0.00 1.28
2573 4198 8.352752 TGTAGATTTCAGCGACAAGTAATATG 57.647 34.615 0.00 0.00 0.00 1.78
2574 4199 6.851222 AGATTTCAGCGACAAGTAATATGG 57.149 37.500 0.00 0.00 0.00 2.74
2575 4200 6.582636 AGATTTCAGCGACAAGTAATATGGA 58.417 36.000 0.00 0.00 0.00 3.41
2577 4202 6.844696 TTTCAGCGACAAGTAATATGGATC 57.155 37.500 0.00 0.00 0.00 3.36
2579 4204 3.675225 CAGCGACAAGTAATATGGATCGG 59.325 47.826 0.00 0.00 0.00 4.18
2580 4205 3.572682 AGCGACAAGTAATATGGATCGGA 59.427 43.478 0.00 0.00 0.00 4.55
2581 4206 3.673809 GCGACAAGTAATATGGATCGGAC 59.326 47.826 0.00 0.00 0.00 4.79
2582 4207 3.912563 CGACAAGTAATATGGATCGGACG 59.087 47.826 0.00 0.00 0.00 4.79
2591 4231 4.593864 GATCGGACGGAGCCTGGC 62.594 72.222 11.65 11.65 0.00 4.85
2628 4268 5.709164 AGCTCTGTTGCTTGTGAATCTATTT 59.291 36.000 0.00 0.00 40.93 1.40
2631 4271 5.931724 TCTGTTGCTTGTGAATCTATTTCGA 59.068 36.000 0.00 0.00 37.13 3.71
2632 4272 6.426633 TCTGTTGCTTGTGAATCTATTTCGAA 59.573 34.615 0.00 0.00 37.13 3.71
2633 4273 6.964908 TGTTGCTTGTGAATCTATTTCGAAA 58.035 32.000 13.91 13.91 37.13 3.46
2634 4274 7.421599 TGTTGCTTGTGAATCTATTTCGAAAA 58.578 30.769 15.66 0.00 37.13 2.29
2635 4275 7.918033 TGTTGCTTGTGAATCTATTTCGAAAAA 59.082 29.630 15.66 4.09 37.13 1.94
2658 4298 2.262423 AAAATCAGATAGGGGCGAGC 57.738 50.000 0.00 0.00 0.00 5.03
2659 4299 0.034059 AAATCAGATAGGGGCGAGCG 59.966 55.000 0.00 0.00 0.00 5.03
2660 4300 1.821061 AATCAGATAGGGGCGAGCGG 61.821 60.000 0.00 0.00 0.00 5.52
2662 4302 4.220163 AGATAGGGGCGAGCGGGA 62.220 66.667 0.00 0.00 0.00 5.14
2663 4303 3.992317 GATAGGGGCGAGCGGGAC 61.992 72.222 0.00 0.00 0.00 4.46
2664 4304 4.541648 ATAGGGGCGAGCGGGACT 62.542 66.667 0.00 0.00 0.00 3.85
2669 4309 4.070552 GGCGAGCGGGACTGTTCT 62.071 66.667 0.00 0.00 0.00 3.01
2670 4310 2.507324 GCGAGCGGGACTGTTCTC 60.507 66.667 0.00 0.00 0.00 2.87
2671 4311 2.962569 CGAGCGGGACTGTTCTCA 59.037 61.111 0.00 0.00 0.00 3.27
2672 4312 1.513158 CGAGCGGGACTGTTCTCAT 59.487 57.895 0.00 0.00 0.00 2.90
2675 4315 2.003301 GAGCGGGACTGTTCTCATTTC 58.997 52.381 0.00 0.00 0.00 2.17
2679 4319 3.003480 CGGGACTGTTCTCATTTCTTCC 58.997 50.000 0.00 0.00 0.00 3.46
2766 4420 2.563471 TTTGGAAACGGAAAACGGTG 57.437 45.000 0.00 0.00 45.59 4.94
2777 4431 0.318445 AAAACGGTGTCGAGTCTCGG 60.318 55.000 21.63 8.05 40.88 4.63
2794 4448 2.111878 GCCTGATATGCTGCCGGT 59.888 61.111 1.90 0.00 0.00 5.28
2795 4449 2.256591 GCCTGATATGCTGCCGGTG 61.257 63.158 1.90 0.00 0.00 4.94
2811 4465 4.283467 TGCCGGTGCAGATTATATACTCTT 59.717 41.667 1.90 0.00 44.23 2.85
2814 4468 6.872020 GCCGGTGCAGATTATATACTCTTTTA 59.128 38.462 1.90 0.00 37.47 1.52
2816 4470 8.873830 CCGGTGCAGATTATATACTCTTTTATG 58.126 37.037 0.01 0.00 0.00 1.90
2817 4471 8.873830 CGGTGCAGATTATATACTCTTTTATGG 58.126 37.037 0.01 0.00 0.00 2.74
2818 4472 8.669243 GGTGCAGATTATATACTCTTTTATGGC 58.331 37.037 0.01 1.55 0.00 4.40
2819 4473 8.669243 GTGCAGATTATATACTCTTTTATGGCC 58.331 37.037 0.00 0.00 0.00 5.36
2821 4475 9.454859 GCAGATTATATACTCTTTTATGGCCTT 57.545 33.333 3.32 0.00 0.00 4.35
2826 4480 7.751768 ATATACTCTTTTATGGCCTTTCTGC 57.248 36.000 3.32 0.00 0.00 4.26
2828 4482 5.179452 ACTCTTTTATGGCCTTTCTGCTA 57.821 39.130 3.32 0.00 0.00 3.49
2832 4540 7.100458 TCTTTTATGGCCTTTCTGCTATTTC 57.900 36.000 3.32 0.00 34.08 2.17
2882 4590 2.158519 TCCTTTCCTGGGTCCTGTTTTC 60.159 50.000 0.00 0.00 0.00 2.29
2883 4591 2.424234 CCTTTCCTGGGTCCTGTTTTCA 60.424 50.000 0.00 0.00 0.00 2.69
2923 4651 2.480419 ACTGCTGACATTACGTTTGCTC 59.520 45.455 0.00 0.00 0.00 4.26
2934 4662 3.951775 ACGTTTGCTCTCTCTGATCTT 57.048 42.857 0.00 0.00 0.00 2.40
2938 4666 4.143158 CGTTTGCTCTCTCTGATCTTTGTG 60.143 45.833 0.00 0.00 0.00 3.33
3091 4819 3.578716 ACCATGTAGCAGAGTACAAGTGT 59.421 43.478 0.00 0.00 36.51 3.55
3100 4828 6.940739 AGCAGAGTACAAGTGTGATAAGAAT 58.059 36.000 0.00 0.00 0.00 2.40
3214 4942 9.780413 CTCAAAGAGGTATTTTGCTCTTAATTC 57.220 33.333 0.00 0.00 35.40 2.17
3324 5077 2.097036 GGTTTCCCTTTCGGTATTGGG 58.903 52.381 0.00 0.00 40.95 4.12
3589 5342 0.034670 AGAGGATTGAACAGCAGGGC 60.035 55.000 0.00 0.00 0.00 5.19
3822 5579 3.115390 ACCTGACATTAGGCATGTACCT 58.885 45.455 0.00 0.00 46.96 3.08
3957 5714 7.658261 TCGGATCGTTAGTTTCTATGATCATT 58.342 34.615 14.65 0.00 38.14 2.57
3958 5715 7.595130 TCGGATCGTTAGTTTCTATGATCATTG 59.405 37.037 14.65 12.33 38.14 2.82
3959 5716 7.595130 CGGATCGTTAGTTTCTATGATCATTGA 59.405 37.037 14.65 14.70 38.14 2.57
3995 5752 3.001634 GCATCCACATCATGACTGTTACG 59.998 47.826 0.00 0.00 0.00 3.18
4015 5772 3.319122 ACGCCTCTTTTCATTTTGCTTCT 59.681 39.130 0.00 0.00 0.00 2.85
4022 5779 7.099266 TCTTTTCATTTTGCTTCTTCAGTCA 57.901 32.000 0.00 0.00 0.00 3.41
4030 5787 8.857216 CATTTTGCTTCTTCAGTCATTGTATTC 58.143 33.333 0.00 0.00 0.00 1.75
4047 5804 3.923017 ATTCTTTCTTTTCACCCTGCG 57.077 42.857 0.00 0.00 0.00 5.18
4057 5814 0.603707 TCACCCTGCGCTCTGAAAAG 60.604 55.000 9.73 0.00 0.00 2.27
4087 5844 5.705441 TCATCATTTGGTTGGAGTTCTACAC 59.295 40.000 0.00 0.00 0.00 2.90
4108 5865 7.010339 ACACCTTCTAGTTTCTTGCTTATCT 57.990 36.000 0.00 0.00 0.00 1.98
4209 5966 3.418684 TCCTAAACCTGCACCTCTTTC 57.581 47.619 0.00 0.00 0.00 2.62
4244 6001 2.087646 GTGATGAAGAACCAGGAAGCC 58.912 52.381 0.00 0.00 0.00 4.35
4328 6085 1.142748 CGCGAGGAAGAGCAAGGAT 59.857 57.895 0.00 0.00 0.00 3.24
4343 6100 3.552875 CAAGGATGACATCTCCTGCATT 58.447 45.455 14.95 0.00 42.42 3.56
4370 6127 1.156645 GCTTCCGCTGCTGAATCGAT 61.157 55.000 6.96 0.00 0.00 3.59
4460 6217 7.201767 GCTGCTCCAGATTGAAATTATGTAGTT 60.202 37.037 0.00 0.00 32.44 2.24
4496 6253 7.655521 TTGTACCTATAGTAGCTGTGAACAT 57.344 36.000 0.00 0.00 0.00 2.71
4504 6261 2.556144 AGCTGTGAACATGCTTGAGA 57.444 45.000 6.60 0.00 32.61 3.27
4776 6536 6.071952 TGCAGCCTATTTCCTTGTTTTCTTAG 60.072 38.462 0.00 0.00 0.00 2.18
4813 7971 2.080693 CATGCACCGCAACCTAAGTAA 58.919 47.619 0.00 0.00 43.62 2.24
4855 8014 7.156673 TCACGGCTACTAAGTAAAAAGATGTT 58.843 34.615 0.00 0.00 0.00 2.71
4875 8034 6.935741 TGTTCTACAGTGCAAAATAGTGTT 57.064 33.333 0.00 0.00 33.91 3.32
4887 8046 5.629435 GCAAAATAGTGTTGAAAGTGCTACC 59.371 40.000 0.00 0.00 0.00 3.18
4888 8047 6.515035 GCAAAATAGTGTTGAAAGTGCTACCT 60.515 38.462 0.00 0.00 0.00 3.08
4947 8106 8.485578 TGACCACCTAAAATTGTAGGAAAAAT 57.514 30.769 25.91 8.20 43.06 1.82
5106 9713 1.116308 GACCCTCCTAGTCTCTTGGC 58.884 60.000 0.00 0.00 0.00 4.52
5107 9714 0.713579 ACCCTCCTAGTCTCTTGGCT 59.286 55.000 0.00 0.00 0.00 4.75
5108 9715 1.118838 CCCTCCTAGTCTCTTGGCTG 58.881 60.000 0.00 0.00 0.00 4.85
5111 9718 0.978146 TCCTAGTCTCTTGGCTGGGC 60.978 60.000 0.00 0.00 33.96 5.36
5112 9719 1.267574 CCTAGTCTCTTGGCTGGGCA 61.268 60.000 0.00 0.00 0.00 5.36
5113 9720 0.615331 CTAGTCTCTTGGCTGGGCAA 59.385 55.000 9.14 9.14 0.00 4.52
5116 9723 1.000521 TCTCTTGGCTGGGCAATGG 60.001 57.895 9.88 6.50 0.00 3.16
5118 9725 0.034186 CTCTTGGCTGGGCAATGGTA 60.034 55.000 9.88 0.00 0.00 3.25
5119 9726 0.323360 TCTTGGCTGGGCAATGGTAC 60.323 55.000 9.88 0.00 0.00 3.34
5135 9742 4.503741 TGGTACACTTACGTACACCTTC 57.496 45.455 0.00 0.00 42.95 3.46
5136 9743 4.144297 TGGTACACTTACGTACACCTTCT 58.856 43.478 0.00 0.00 42.95 2.85
5137 9744 5.312895 TGGTACACTTACGTACACCTTCTA 58.687 41.667 0.00 0.00 42.95 2.10
5138 9745 5.181245 TGGTACACTTACGTACACCTTCTAC 59.819 44.000 0.00 0.00 42.95 2.59
5139 9746 4.410492 ACACTTACGTACACCTTCTACG 57.590 45.455 0.00 0.00 42.22 3.51
5141 9748 4.994852 ACACTTACGTACACCTTCTACGTA 59.005 41.667 6.71 6.71 46.38 3.57
5147 9754 6.743575 ACGTACACCTTCTACGTAATTACT 57.256 37.500 13.56 3.86 46.38 2.24
5148 9755 6.546395 ACGTACACCTTCTACGTAATTACTG 58.454 40.000 13.56 9.41 46.38 2.74
5149 9756 6.149474 ACGTACACCTTCTACGTAATTACTGT 59.851 38.462 13.56 14.08 46.38 3.55
5150 9757 7.023575 CGTACACCTTCTACGTAATTACTGTT 58.976 38.462 13.56 0.96 33.74 3.16
5151 9758 8.175069 CGTACACCTTCTACGTAATTACTGTTA 58.825 37.037 13.56 2.02 33.74 2.41
5153 9760 8.922058 ACACCTTCTACGTAATTACTGTTATG 57.078 34.615 13.56 0.00 0.00 1.90
5154 9761 8.526147 ACACCTTCTACGTAATTACTGTTATGT 58.474 33.333 13.56 5.59 37.51 2.29
5155 9762 8.804743 CACCTTCTACGTAATTACTGTTATGTG 58.195 37.037 13.56 8.65 35.84 3.21
5156 9763 7.490402 ACCTTCTACGTAATTACTGTTATGTGC 59.510 37.037 13.56 0.00 35.84 4.57
5157 9764 7.705325 CCTTCTACGTAATTACTGTTATGTGCT 59.295 37.037 13.56 0.00 35.84 4.40
5158 9765 7.980742 TCTACGTAATTACTGTTATGTGCTG 57.019 36.000 13.56 0.00 35.84 4.41
5159 9766 7.764331 TCTACGTAATTACTGTTATGTGCTGA 58.236 34.615 13.56 2.15 35.84 4.26
5160 9767 8.410912 TCTACGTAATTACTGTTATGTGCTGAT 58.589 33.333 13.56 0.00 35.84 2.90
5161 9768 7.234187 ACGTAATTACTGTTATGTGCTGATG 57.766 36.000 13.56 0.00 33.68 3.07
5162 9769 6.816640 ACGTAATTACTGTTATGTGCTGATGT 59.183 34.615 13.56 0.00 33.68 3.06
5163 9770 7.119360 CGTAATTACTGTTATGTGCTGATGTG 58.881 38.462 13.56 0.00 0.00 3.21
5164 9771 6.441093 AATTACTGTTATGTGCTGATGTGG 57.559 37.500 0.00 0.00 0.00 4.17
5165 9772 2.086869 ACTGTTATGTGCTGATGTGGC 58.913 47.619 0.00 0.00 0.00 5.01
5166 9773 1.402968 CTGTTATGTGCTGATGTGGCC 59.597 52.381 0.00 0.00 0.00 5.36
5167 9774 0.740737 GTTATGTGCTGATGTGGCCC 59.259 55.000 0.00 0.00 0.00 5.80
5168 9775 0.747644 TTATGTGCTGATGTGGCCCG 60.748 55.000 0.00 0.00 0.00 6.13
5169 9776 1.621672 TATGTGCTGATGTGGCCCGA 61.622 55.000 0.00 0.00 0.00 5.14
5170 9777 2.359850 GTGCTGATGTGGCCCGAA 60.360 61.111 0.00 0.00 0.00 4.30
5171 9778 1.750399 GTGCTGATGTGGCCCGAAT 60.750 57.895 0.00 0.00 0.00 3.34
5172 9779 1.451927 TGCTGATGTGGCCCGAATC 60.452 57.895 0.00 0.87 0.00 2.52
5173 9780 1.451927 GCTGATGTGGCCCGAATCA 60.452 57.895 0.00 6.10 0.00 2.57
5174 9781 1.031571 GCTGATGTGGCCCGAATCAA 61.032 55.000 0.00 0.00 30.28 2.57
5175 9782 1.683943 CTGATGTGGCCCGAATCAAT 58.316 50.000 0.00 0.00 30.28 2.57
5176 9783 2.026641 CTGATGTGGCCCGAATCAATT 58.973 47.619 0.00 0.00 30.28 2.32
5177 9784 1.750206 TGATGTGGCCCGAATCAATTG 59.250 47.619 0.00 0.00 0.00 2.32
5178 9785 1.067516 GATGTGGCCCGAATCAATTGG 59.932 52.381 5.42 0.00 0.00 3.16
5179 9786 0.969917 TGTGGCCCGAATCAATTGGG 60.970 55.000 5.42 0.00 46.22 4.12
5182 9789 4.353325 CCCGAATCAATTGGGCCA 57.647 55.556 0.00 0.00 35.82 5.36
5183 9790 2.589494 CCCGAATCAATTGGGCCAA 58.411 52.632 23.33 23.33 35.82 4.52
5184 9791 0.461135 CCCGAATCAATTGGGCCAAG 59.539 55.000 25.16 12.15 35.82 3.61
5185 9792 1.473258 CCGAATCAATTGGGCCAAGA 58.527 50.000 25.16 17.34 0.00 3.02
5186 9793 2.034124 CCGAATCAATTGGGCCAAGAT 58.966 47.619 25.16 18.82 0.00 2.40
5187 9794 2.431782 CCGAATCAATTGGGCCAAGATT 59.568 45.455 25.41 25.41 0.00 2.40
5188 9795 3.636300 CCGAATCAATTGGGCCAAGATTA 59.364 43.478 25.26 12.94 0.00 1.75
5189 9796 4.261741 CCGAATCAATTGGGCCAAGATTAG 60.262 45.833 25.26 24.06 0.00 1.73
5190 9797 4.625028 GAATCAATTGGGCCAAGATTAGC 58.375 43.478 25.26 14.97 0.00 3.09
5191 9798 3.098774 TCAATTGGGCCAAGATTAGCA 57.901 42.857 25.16 0.00 0.00 3.49
5192 9799 3.025978 TCAATTGGGCCAAGATTAGCAG 58.974 45.455 25.16 7.74 0.00 4.24
5193 9800 1.406903 ATTGGGCCAAGATTAGCAGC 58.593 50.000 25.16 0.00 0.00 5.25
5194 9801 0.332632 TTGGGCCAAGATTAGCAGCT 59.667 50.000 16.66 0.00 0.00 4.24
5195 9802 0.394762 TGGGCCAAGATTAGCAGCTG 60.395 55.000 10.11 10.11 0.00 4.24
5196 9803 1.732308 GGCCAAGATTAGCAGCTGC 59.268 57.895 31.53 31.53 42.49 5.25
5197 9804 1.732308 GCCAAGATTAGCAGCTGCC 59.268 57.895 34.39 19.32 43.38 4.85
5198 9805 1.732417 GCCAAGATTAGCAGCTGCCC 61.732 60.000 34.39 20.45 43.38 5.36
5199 9806 1.105759 CCAAGATTAGCAGCTGCCCC 61.106 60.000 34.39 20.10 43.38 5.80
5200 9807 1.105759 CAAGATTAGCAGCTGCCCCC 61.106 60.000 34.39 20.44 43.38 5.40
5201 9808 1.284841 AAGATTAGCAGCTGCCCCCT 61.285 55.000 34.39 22.26 43.38 4.79
5202 9809 1.228094 GATTAGCAGCTGCCCCCTC 60.228 63.158 34.39 21.25 43.38 4.30
5203 9810 2.689035 GATTAGCAGCTGCCCCCTCC 62.689 65.000 34.39 15.38 43.38 4.30
5221 9828 4.337013 CCCCCGGGTTGAATTCAG 57.663 61.111 21.85 0.00 0.00 3.02
5222 9829 1.379843 CCCCCGGGTTGAATTCAGG 60.380 63.158 21.85 5.92 0.00 3.86
5223 9830 1.379843 CCCCGGGTTGAATTCAGGG 60.380 63.158 21.85 19.21 38.59 4.45
5224 9831 1.379843 CCCGGGTTGAATTCAGGGG 60.380 63.158 14.18 17.56 35.36 4.79
5225 9832 1.379843 CCGGGTTGAATTCAGGGGG 60.380 63.158 8.41 5.50 0.00 5.40
5226 9833 2.052104 CGGGTTGAATTCAGGGGGC 61.052 63.158 8.41 0.00 0.00 5.80
5227 9834 2.052104 GGGTTGAATTCAGGGGGCG 61.052 63.158 8.41 0.00 0.00 6.13
5228 9835 1.304134 GGTTGAATTCAGGGGGCGT 60.304 57.895 8.41 0.00 0.00 5.68
5229 9836 1.595093 GGTTGAATTCAGGGGGCGTG 61.595 60.000 8.41 0.00 0.00 5.34
5230 9837 1.304052 TTGAATTCAGGGGGCGTGG 60.304 57.895 8.41 0.00 0.00 4.94
5231 9838 1.784301 TTGAATTCAGGGGGCGTGGA 61.784 55.000 8.41 0.00 0.00 4.02
5232 9839 1.452108 GAATTCAGGGGGCGTGGAG 60.452 63.158 0.00 0.00 0.00 3.86
5233 9840 1.910580 GAATTCAGGGGGCGTGGAGA 61.911 60.000 0.00 0.00 0.00 3.71
5234 9841 1.281925 AATTCAGGGGGCGTGGAGAT 61.282 55.000 0.00 0.00 0.00 2.75
5235 9842 1.987807 ATTCAGGGGGCGTGGAGATG 61.988 60.000 0.00 0.00 0.00 2.90
5236 9843 3.083349 CAGGGGGCGTGGAGATGA 61.083 66.667 0.00 0.00 0.00 2.92
5237 9844 2.040464 AGGGGGCGTGGAGATGAT 60.040 61.111 0.00 0.00 0.00 2.45
5238 9845 2.111878 GGGGGCGTGGAGATGATG 59.888 66.667 0.00 0.00 0.00 3.07
5239 9846 2.746375 GGGGGCGTGGAGATGATGT 61.746 63.158 0.00 0.00 0.00 3.06
5240 9847 1.407656 GGGGGCGTGGAGATGATGTA 61.408 60.000 0.00 0.00 0.00 2.29
5241 9848 0.034059 GGGGCGTGGAGATGATGTAG 59.966 60.000 0.00 0.00 0.00 2.74
5242 9849 0.034059 GGGCGTGGAGATGATGTAGG 59.966 60.000 0.00 0.00 0.00 3.18
5243 9850 1.040646 GGCGTGGAGATGATGTAGGA 58.959 55.000 0.00 0.00 0.00 2.94
5244 9851 1.412710 GGCGTGGAGATGATGTAGGAA 59.587 52.381 0.00 0.00 0.00 3.36
5245 9852 2.546795 GGCGTGGAGATGATGTAGGAAG 60.547 54.545 0.00 0.00 0.00 3.46
5246 9853 2.546795 GCGTGGAGATGATGTAGGAAGG 60.547 54.545 0.00 0.00 0.00 3.46
5247 9854 2.695666 CGTGGAGATGATGTAGGAAGGT 59.304 50.000 0.00 0.00 0.00 3.50
5248 9855 3.133003 CGTGGAGATGATGTAGGAAGGTT 59.867 47.826 0.00 0.00 0.00 3.50
5249 9856 4.341235 CGTGGAGATGATGTAGGAAGGTTA 59.659 45.833 0.00 0.00 0.00 2.85
5250 9857 5.602628 GTGGAGATGATGTAGGAAGGTTAC 58.397 45.833 0.00 0.00 0.00 2.50
5251 9858 4.341235 TGGAGATGATGTAGGAAGGTTACG 59.659 45.833 0.00 0.00 0.00 3.18
5252 9859 4.341520 GGAGATGATGTAGGAAGGTTACGT 59.658 45.833 0.00 0.00 0.00 3.57
5253 9860 5.533903 GGAGATGATGTAGGAAGGTTACGTA 59.466 44.000 0.00 0.00 0.00 3.57
5254 9861 6.040166 GGAGATGATGTAGGAAGGTTACGTAA 59.960 42.308 3.29 3.29 0.00 3.18
5283 9890 4.996788 ACGTAGATTTACCTAGGTGTGG 57.003 45.455 25.33 7.24 36.67 4.17
5284 9891 3.131755 ACGTAGATTTACCTAGGTGTGGC 59.868 47.826 25.33 11.18 36.67 5.01
5285 9892 3.131577 CGTAGATTTACCTAGGTGTGGCA 59.868 47.826 25.33 0.00 0.00 4.92
5286 9893 4.202223 CGTAGATTTACCTAGGTGTGGCAT 60.202 45.833 25.33 8.58 0.00 4.40
5287 9894 4.862641 AGATTTACCTAGGTGTGGCATT 57.137 40.909 25.33 1.99 0.00 3.56
5288 9895 5.968676 AGATTTACCTAGGTGTGGCATTA 57.031 39.130 25.33 0.00 0.00 1.90
5289 9896 6.515512 AGATTTACCTAGGTGTGGCATTAT 57.484 37.500 25.33 5.76 0.00 1.28
5290 9897 6.911308 AGATTTACCTAGGTGTGGCATTATT 58.089 36.000 25.33 0.00 0.00 1.40
5330 9938 2.957006 TGGAGGTCGAATAAGTAGGAGC 59.043 50.000 0.00 0.00 0.00 4.70
5390 9998 0.555769 GGCATCCAAGGTGGGGATAA 59.444 55.000 0.00 0.00 43.24 1.75
5424 10032 2.425668 GGTCTAGTGAGCTCCAAGAGAC 59.574 54.545 19.33 19.33 37.73 3.36
5593 10204 4.955335 TGTCCAATTAGGGTAGGAGAGAA 58.045 43.478 0.00 0.00 38.24 2.87
5594 10205 5.347124 TGTCCAATTAGGGTAGGAGAGAAA 58.653 41.667 0.00 0.00 38.24 2.52
5595 10206 5.788533 TGTCCAATTAGGGTAGGAGAGAAAA 59.211 40.000 0.00 0.00 38.24 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.941664 CATCACTTAGTCTTTTATTGGCATAAG 57.058 33.333 0.00 0.00 0.00 1.73
19 20 3.065925 GCATTTGGAGCCATCACTTAGTC 59.934 47.826 0.00 0.00 0.00 2.59
28 29 1.210478 ACGACTAGCATTTGGAGCCAT 59.790 47.619 0.00 0.00 0.00 4.40
42 43 9.716531 ATGTGTACACTTATATAGCTACGACTA 57.283 33.333 25.60 0.17 0.00 2.59
54 55 9.361315 GTACAACATGACATGTGTACACTTATA 57.639 33.333 30.83 6.89 44.07 0.98
113 117 6.524101 TGCTAAAAGATGGGTAAAATGGAC 57.476 37.500 0.00 0.00 0.00 4.02
198 202 7.962995 TGCACATGGATAAAAAGGGTAAATA 57.037 32.000 0.00 0.00 0.00 1.40
248 255 4.202172 TGGTTGAAGAACACATAGTCGACA 60.202 41.667 19.50 4.13 33.27 4.35
258 265 3.621715 AGAAACGAGTGGTTGAAGAACAC 59.378 43.478 0.00 0.00 39.30 3.32
274 281 2.537401 GGTCGAATAGGTGGAGAAACG 58.463 52.381 0.00 0.00 0.00 3.60
336 343 0.774276 TACTTGGGTTGGATGGTGCA 59.226 50.000 0.00 0.00 0.00 4.57
339 346 2.986728 ACTTCTACTTGGGTTGGATGGT 59.013 45.455 0.00 0.00 0.00 3.55
349 356 2.224281 TGGAGTGTGCACTTCTACTTGG 60.224 50.000 19.41 0.00 42.66 3.61
370 377 2.563179 AGGTAATCAAGTGCGACTGAGT 59.437 45.455 0.00 0.00 0.00 3.41
374 381 4.002906 TGAAAGGTAATCAAGTGCGACT 57.997 40.909 0.00 0.00 0.00 4.18
420 431 4.273318 GTCACCTATGGAGAAAAAGGCAT 58.727 43.478 0.00 0.00 31.98 4.40
431 442 2.953093 TACCCTTGGTCACCTATGGA 57.047 50.000 6.60 0.00 37.09 3.41
470 1983 7.276438 GCTTGCAAGAATCACCTTTAAATTAGG 59.724 37.037 30.39 0.00 38.79 2.69
520 2033 0.747852 GCAACTTTGGTCCGGGAAAA 59.252 50.000 0.00 0.00 0.00 2.29
524 2037 1.795170 CTGTGCAACTTTGGTCCGGG 61.795 60.000 0.00 0.00 38.04 5.73
568 2082 2.314852 ACCTTAGCCCTGGCCTATTTTT 59.685 45.455 3.32 0.00 43.17 1.94
619 2133 9.645128 ACCATGTTGGATATTTAGATGAAATCA 57.355 29.630 0.00 0.00 43.24 2.57
636 2150 3.691118 CAGTGTTGATAGGACCATGTTGG 59.309 47.826 0.00 0.00 45.02 3.77
658 2172 3.739300 ACACGCTGACAACACATAGTAAC 59.261 43.478 0.00 0.00 0.00 2.50
659 2173 3.985008 ACACGCTGACAACACATAGTAA 58.015 40.909 0.00 0.00 0.00 2.24
671 2185 0.320771 ATCTCCCACAACACGCTGAC 60.321 55.000 0.00 0.00 0.00 3.51
672 2186 0.320683 CATCTCCCACAACACGCTGA 60.321 55.000 0.00 0.00 0.00 4.26
675 2189 2.870372 GCATCTCCCACAACACGC 59.130 61.111 0.00 0.00 0.00 5.34
677 2191 1.298859 GGACGCATCTCCCACAACAC 61.299 60.000 0.00 0.00 0.00 3.32
678 2192 1.003839 GGACGCATCTCCCACAACA 60.004 57.895 0.00 0.00 0.00 3.33
703 2217 2.637947 TGCTTTGCGCTGTTGGATATA 58.362 42.857 9.73 0.00 40.11 0.86
713 2227 0.110056 CGTCTGATTTGCTTTGCGCT 60.110 50.000 9.73 0.00 40.11 5.92
717 2231 2.693797 AGTGCGTCTGATTTGCTTTG 57.306 45.000 0.00 0.00 0.00 2.77
720 2234 2.093500 TGGATAGTGCGTCTGATTTGCT 60.093 45.455 0.00 0.00 0.00 3.91
732 2246 2.017049 GTGTTGGTGGATGGATAGTGC 58.983 52.381 0.00 0.00 0.00 4.40
743 2257 1.145156 TCTGTGGACGTGTTGGTGG 59.855 57.895 0.00 0.00 0.00 4.61
747 2261 1.487452 CCGTGTCTGTGGACGTGTTG 61.487 60.000 0.00 0.00 44.83 3.33
760 2274 1.858091 CCAGCTCATGTATCCGTGTC 58.142 55.000 0.00 0.00 0.00 3.67
790 2306 5.948742 TTTTTCAAAACCTTGAGGGACAT 57.051 34.783 1.54 0.00 42.48 3.06
817 2337 3.328931 CCTCATAGGCACATATGTTCCCT 59.671 47.826 19.40 20.96 35.16 4.20
882 2402 1.135199 GGCATACGGACGTCAAAGAGA 60.135 52.381 18.91 2.83 0.00 3.10
896 2416 3.980442 TTTGGGACGGGCGGCATAC 62.980 63.158 12.47 0.00 0.00 2.39
935 2455 1.002274 AGGCGGACCTCATCTCCTT 59.998 57.895 0.00 0.00 46.34 3.36
967 2490 2.046892 CACCGGTTGCCTCTCCTG 60.047 66.667 2.97 0.00 0.00 3.86
1007 2532 2.296190 GGCCGGTTTCTTGACATTCTTT 59.704 45.455 1.90 0.00 0.00 2.52
1011 2536 0.536460 ACGGCCGGTTTCTTGACATT 60.536 50.000 31.76 0.00 0.00 2.71
1100 2625 3.702555 GCGGAAATCGGCGGATCG 61.703 66.667 7.21 8.17 39.69 3.69
1116 2641 2.123033 GAGGAGGAGGAGGAGGGC 60.123 72.222 0.00 0.00 0.00 5.19
1131 2656 2.419297 GGTGCCACTACAAGAGGATGAG 60.419 54.545 0.00 0.00 0.00 2.90
1132 2657 1.555075 GGTGCCACTACAAGAGGATGA 59.445 52.381 0.00 0.00 0.00 2.92
1133 2658 1.407437 GGGTGCCACTACAAGAGGATG 60.407 57.143 0.00 0.00 0.00 3.51
1177 2702 2.972505 CGTTGGTTGCTGCTCGGT 60.973 61.111 0.00 0.00 0.00 4.69
1178 2703 2.664851 TCGTTGGTTGCTGCTCGG 60.665 61.111 0.00 0.00 0.00 4.63
1179 2704 1.891060 GAGTCGTTGGTTGCTGCTCG 61.891 60.000 0.00 0.00 0.00 5.03
1180 2705 1.569479 GGAGTCGTTGGTTGCTGCTC 61.569 60.000 0.00 0.00 0.00 4.26
1181 2706 1.598130 GGAGTCGTTGGTTGCTGCT 60.598 57.895 0.00 0.00 0.00 4.24
1182 2707 2.946762 GGAGTCGTTGGTTGCTGC 59.053 61.111 0.00 0.00 0.00 5.25
1183 2708 2.954753 GCGGAGTCGTTGGTTGCTG 61.955 63.158 0.00 0.00 38.89 4.41
1184 2709 2.665185 GCGGAGTCGTTGGTTGCT 60.665 61.111 0.00 0.00 38.89 3.91
1185 2710 2.665185 AGCGGAGTCGTTGGTTGC 60.665 61.111 0.00 0.00 38.89 4.17
1186 2711 2.027625 GGAGCGGAGTCGTTGGTTG 61.028 63.158 0.00 0.00 38.89 3.77
1187 2712 2.342648 GGAGCGGAGTCGTTGGTT 59.657 61.111 0.00 0.00 38.89 3.67
1188 2713 3.692406 GGGAGCGGAGTCGTTGGT 61.692 66.667 0.00 0.00 38.89 3.67
1209 2746 0.516001 GCGAAGACCGGGAAAAGTTC 59.484 55.000 6.32 0.00 39.04 3.01
1338 2887 1.268283 GGGTGGGAGTGGGAGAGAAG 61.268 65.000 0.00 0.00 0.00 2.85
1374 2923 0.740164 TCGAGAAGACGAGACGAGGG 60.740 60.000 0.00 0.00 37.37 4.30
1480 3036 3.573491 GCCGACCATACGCCAAGC 61.573 66.667 0.00 0.00 0.00 4.01
1550 3106 3.492311 GAGGATGAGGACGAGGCGC 62.492 68.421 0.00 0.00 0.00 6.53
1557 3113 0.560688 AGGAGGAGGAGGATGAGGAC 59.439 60.000 0.00 0.00 0.00 3.85
1622 3178 3.727258 CAGGGCGGGGTTGGATGA 61.727 66.667 0.00 0.00 0.00 2.92
1678 3235 2.789339 GCGTTCAAGGAGAAACTTTTGC 59.211 45.455 0.00 0.00 38.13 3.68
1757 3316 4.168101 ACCAAACCTCTCCTCTGTATTCA 58.832 43.478 0.00 0.00 0.00 2.57
1764 3323 1.068121 CCCAACCAAACCTCTCCTCT 58.932 55.000 0.00 0.00 0.00 3.69
1791 3350 1.225475 GTTCACGCGCAGATCAACG 60.225 57.895 5.73 0.00 0.00 4.10
1792 3351 0.093705 GAGTTCACGCGCAGATCAAC 59.906 55.000 5.73 2.28 0.00 3.18
1793 3352 0.319469 TGAGTTCACGCGCAGATCAA 60.319 50.000 5.73 0.00 0.00 2.57
1794 3353 1.008875 GTGAGTTCACGCGCAGATCA 61.009 55.000 5.73 3.59 37.10 2.92
1795 3354 1.704582 GTGAGTTCACGCGCAGATC 59.295 57.895 5.73 3.91 37.10 2.75
1812 3371 3.506067 AGCGAAATCGGAGGAATTTTTGT 59.494 39.130 4.84 0.00 40.23 2.83
1813 3372 4.096732 AGCGAAATCGGAGGAATTTTTG 57.903 40.909 4.84 0.00 40.23 2.44
1822 3381 1.917273 TTTCGGTAGCGAAATCGGAG 58.083 50.000 32.05 0.00 40.23 4.63
1835 3394 2.774687 AGCTAACGGTTGATTTTCGGT 58.225 42.857 3.07 0.00 0.00 4.69
1838 3397 6.020837 CGAGTAGTAGCTAACGGTTGATTTTC 60.021 42.308 3.07 0.00 0.00 2.29
1839 3398 5.803967 CGAGTAGTAGCTAACGGTTGATTTT 59.196 40.000 3.07 0.00 0.00 1.82
1845 3404 3.307242 CGTACGAGTAGTAGCTAACGGTT 59.693 47.826 10.44 0.00 35.72 4.44
1846 3405 2.860735 CGTACGAGTAGTAGCTAACGGT 59.139 50.000 10.44 0.00 35.72 4.83
1847 3406 2.860735 ACGTACGAGTAGTAGCTAACGG 59.139 50.000 24.41 2.83 35.72 4.44
1848 3407 4.499399 TGTACGTACGAGTAGTAGCTAACG 59.501 45.833 24.41 8.39 35.72 3.18
1849 3408 5.950965 TGTACGTACGAGTAGTAGCTAAC 57.049 43.478 24.41 0.00 35.72 2.34
1850 3409 6.074835 CGATTGTACGTACGAGTAGTAGCTAA 60.075 42.308 24.41 5.62 35.72 3.09
1853 3412 4.440946 CGATTGTACGTACGAGTAGTAGC 58.559 47.826 24.41 3.85 35.72 3.58
1854 3413 4.607114 GCCGATTGTACGTACGAGTAGTAG 60.607 50.000 24.41 8.01 35.72 2.57
1855 3414 3.245284 GCCGATTGTACGTACGAGTAGTA 59.755 47.826 24.41 0.00 0.00 1.82
1856 3415 2.030946 GCCGATTGTACGTACGAGTAGT 59.969 50.000 24.41 4.26 0.00 2.73
1857 3416 2.633299 GCCGATTGTACGTACGAGTAG 58.367 52.381 24.41 13.10 0.00 2.57
1858 3417 1.005032 CGCCGATTGTACGTACGAGTA 60.005 52.381 24.41 1.17 34.57 2.59
1859 3418 0.247814 CGCCGATTGTACGTACGAGT 60.248 55.000 24.41 9.10 34.57 4.18
1860 3419 1.526617 GCGCCGATTGTACGTACGAG 61.527 60.000 24.41 8.73 34.57 4.18
1861 3420 1.583451 GCGCCGATTGTACGTACGA 60.583 57.895 24.41 17.80 34.57 3.43
1862 3421 1.794455 CTGCGCCGATTGTACGTACG 61.794 60.000 20.18 15.01 35.31 3.67
1863 3422 0.523968 TCTGCGCCGATTGTACGTAC 60.524 55.000 18.90 18.90 0.00 3.67
1864 3423 0.248336 CTCTGCGCCGATTGTACGTA 60.248 55.000 4.18 0.00 0.00 3.57
1865 3424 1.516386 CTCTGCGCCGATTGTACGT 60.516 57.895 4.18 0.00 0.00 3.57
1866 3425 2.230940 CCTCTGCGCCGATTGTACG 61.231 63.158 4.18 0.00 0.00 3.67
1867 3426 0.872021 CTCCTCTGCGCCGATTGTAC 60.872 60.000 4.18 0.00 0.00 2.90
1868 3427 1.035385 TCTCCTCTGCGCCGATTGTA 61.035 55.000 4.18 0.00 0.00 2.41
1869 3428 1.680522 ATCTCCTCTGCGCCGATTGT 61.681 55.000 4.18 0.00 0.00 2.71
1870 3429 0.531532 AATCTCCTCTGCGCCGATTG 60.532 55.000 4.18 0.00 0.00 2.67
1871 3430 0.179000 AAATCTCCTCTGCGCCGATT 59.821 50.000 4.18 0.73 0.00 3.34
1872 3431 0.249657 GAAATCTCCTCTGCGCCGAT 60.250 55.000 4.18 0.00 0.00 4.18
1873 3432 1.141881 GAAATCTCCTCTGCGCCGA 59.858 57.895 4.18 2.10 0.00 5.54
1874 3433 2.233654 CGAAATCTCCTCTGCGCCG 61.234 63.158 4.18 0.00 0.00 6.46
1875 3434 0.873743 CTCGAAATCTCCTCTGCGCC 60.874 60.000 4.18 0.00 0.00 6.53
1876 3435 1.486644 GCTCGAAATCTCCTCTGCGC 61.487 60.000 0.00 0.00 0.00 6.09
1877 3436 1.205485 CGCTCGAAATCTCCTCTGCG 61.205 60.000 0.00 0.00 36.41 5.18
1878 3437 0.101399 TCGCTCGAAATCTCCTCTGC 59.899 55.000 0.00 0.00 0.00 4.26
1887 3446 3.749088 TGTGGTTGTAAATCGCTCGAAAT 59.251 39.130 0.00 0.00 38.53 2.17
1900 3459 6.183360 ACAGAAAAGCAAATCATGTGGTTGTA 60.183 34.615 0.00 0.00 36.83 2.41
1901 3460 5.051816 CAGAAAAGCAAATCATGTGGTTGT 58.948 37.500 0.00 0.00 36.83 3.32
1902 3461 5.051816 ACAGAAAAGCAAATCATGTGGTTG 58.948 37.500 0.00 1.72 36.83 3.77
1904 3463 4.942761 ACAGAAAAGCAAATCATGTGGT 57.057 36.364 0.00 0.00 0.00 4.16
1906 3465 5.524646 ACCAAACAGAAAAGCAAATCATGTG 59.475 36.000 0.00 0.00 0.00 3.21
1907 3466 5.673514 ACCAAACAGAAAAGCAAATCATGT 58.326 33.333 0.00 0.00 0.00 3.21
1908 3467 6.607735 AACCAAACAGAAAAGCAAATCATG 57.392 33.333 0.00 0.00 0.00 3.07
1935 3494 4.213906 GCCGCCAACAAGTAGTAGTAAAAA 59.786 41.667 0.00 0.00 0.00 1.94
1936 3495 3.747529 GCCGCCAACAAGTAGTAGTAAAA 59.252 43.478 0.00 0.00 0.00 1.52
1941 3500 1.082117 CCGCCGCCAACAAGTAGTAG 61.082 60.000 0.00 0.00 0.00 2.57
1943 3502 2.358247 CCGCCGCCAACAAGTAGT 60.358 61.111 0.00 0.00 0.00 2.73
1944 3503 0.671163 TAACCGCCGCCAACAAGTAG 60.671 55.000 0.00 0.00 0.00 2.57
1950 3511 2.633199 TTAATTTAACCGCCGCCAAC 57.367 45.000 0.00 0.00 0.00 3.77
2004 3565 2.046023 TCCTCCATGCTTGCACCG 60.046 61.111 0.00 0.00 0.00 4.94
2009 3570 1.678123 CCTGTGACTCCTCCATGCTTG 60.678 57.143 0.00 0.00 0.00 4.01
2012 3573 0.835941 ATCCTGTGACTCCTCCATGC 59.164 55.000 0.00 0.00 0.00 4.06
2013 3574 3.054875 TCAAATCCTGTGACTCCTCCATG 60.055 47.826 0.00 0.00 0.00 3.66
2014 3575 3.184628 TCAAATCCTGTGACTCCTCCAT 58.815 45.455 0.00 0.00 0.00 3.41
2015 3576 2.619931 TCAAATCCTGTGACTCCTCCA 58.380 47.619 0.00 0.00 0.00 3.86
2016 3577 3.703001 TTCAAATCCTGTGACTCCTCC 57.297 47.619 0.00 0.00 0.00 4.30
2017 3578 3.438434 GCTTTCAAATCCTGTGACTCCTC 59.562 47.826 0.00 0.00 0.00 3.71
2018 3579 3.073650 AGCTTTCAAATCCTGTGACTCCT 59.926 43.478 0.00 0.00 0.00 3.69
2075 3673 5.213891 ACCCAACTAAGCCTTTCAAATTG 57.786 39.130 0.00 0.00 0.00 2.32
2170 3768 3.726517 ATGACTTGCGTGCGTGCC 61.727 61.111 0.00 0.00 0.00 5.01
2300 3907 1.855213 GCAGTGCGTGATTCCTTGCA 61.855 55.000 0.00 0.00 34.44 4.08
2372 3983 4.880886 AGCCAGCAATTTTGAAACAAAC 57.119 36.364 0.00 0.00 0.00 2.93
2447 4059 6.076981 ACAAGCTGACCATTTTAAGAGTTG 57.923 37.500 0.00 0.00 0.00 3.16
2480 4092 4.219944 GGATACAAAACTGACCCCCTTTTC 59.780 45.833 0.00 0.00 0.00 2.29
2498 4123 5.292671 TGAGCGACGAGTAATATGGATAC 57.707 43.478 0.00 0.00 0.00 2.24
2499 4124 5.952526 TTGAGCGACGAGTAATATGGATA 57.047 39.130 0.00 0.00 0.00 2.59
2500 4125 4.848562 TTGAGCGACGAGTAATATGGAT 57.151 40.909 0.00 0.00 0.00 3.41
2501 4126 4.357142 GTTTGAGCGACGAGTAATATGGA 58.643 43.478 0.00 0.00 0.00 3.41
2502 4127 3.179795 CGTTTGAGCGACGAGTAATATGG 59.820 47.826 0.00 0.00 42.82 2.74
2503 4128 4.033019 TCGTTTGAGCGACGAGTAATATG 58.967 43.478 0.00 0.00 43.79 1.78
2505 4130 3.745332 TCGTTTGAGCGACGAGTAATA 57.255 42.857 0.00 0.00 43.79 0.98
2506 4131 2.624316 TCGTTTGAGCGACGAGTAAT 57.376 45.000 0.00 0.00 43.79 1.89
2511 4136 2.905959 TAGATTCGTTTGAGCGACGA 57.094 45.000 0.00 4.08 46.60 4.20
2512 4137 3.364062 AGATAGATTCGTTTGAGCGACG 58.636 45.455 0.00 0.00 40.85 5.12
2513 4138 4.380382 GCTAGATAGATTCGTTTGAGCGAC 59.620 45.833 0.00 0.00 40.85 5.19
2516 4141 5.174761 CAGTGCTAGATAGATTCGTTTGAGC 59.825 44.000 0.00 0.00 0.00 4.26
2519 4144 7.525688 TTTCAGTGCTAGATAGATTCGTTTG 57.474 36.000 0.00 0.00 0.00 2.93
2520 4145 9.250624 GTATTTCAGTGCTAGATAGATTCGTTT 57.749 33.333 0.00 0.00 0.00 3.60
2521 4146 8.414003 TGTATTTCAGTGCTAGATAGATTCGTT 58.586 33.333 0.00 0.00 0.00 3.85
2522 4147 7.941919 TGTATTTCAGTGCTAGATAGATTCGT 58.058 34.615 0.00 0.00 0.00 3.85
2523 4148 8.858186 CATGTATTTCAGTGCTAGATAGATTCG 58.142 37.037 0.00 0.00 0.00 3.34
2524 4149 9.703892 ACATGTATTTCAGTGCTAGATAGATTC 57.296 33.333 0.00 0.00 0.00 2.52
2531 4156 9.534565 GAAATCTACATGTATTTCAGTGCTAGA 57.465 33.333 21.40 8.54 40.33 2.43
2532 4157 9.317936 TGAAATCTACATGTATTTCAGTGCTAG 57.682 33.333 23.68 5.38 43.59 3.42
2540 4165 7.234187 TGTCGCTGAAATCTACATGTATTTC 57.766 36.000 20.25 20.25 40.78 2.17
2541 4166 7.334421 ACTTGTCGCTGAAATCTACATGTATTT 59.666 33.333 5.91 6.15 29.74 1.40
2542 4167 6.818644 ACTTGTCGCTGAAATCTACATGTATT 59.181 34.615 5.91 0.00 29.74 1.89
2545 4170 4.569943 ACTTGTCGCTGAAATCTACATGT 58.430 39.130 2.69 2.69 0.00 3.21
2546 4171 6.647212 TTACTTGTCGCTGAAATCTACATG 57.353 37.500 0.00 0.00 0.00 3.21
2547 4172 8.982685 CATATTACTTGTCGCTGAAATCTACAT 58.017 33.333 0.00 0.00 0.00 2.29
2549 4174 7.652105 TCCATATTACTTGTCGCTGAAATCTAC 59.348 37.037 0.00 0.00 0.00 2.59
2551 4176 6.582636 TCCATATTACTTGTCGCTGAAATCT 58.417 36.000 0.00 0.00 0.00 2.40
2552 4177 6.844696 TCCATATTACTTGTCGCTGAAATC 57.155 37.500 0.00 0.00 0.00 2.17
2553 4178 6.146184 CGATCCATATTACTTGTCGCTGAAAT 59.854 38.462 0.00 0.00 0.00 2.17
2556 4181 4.546570 CGATCCATATTACTTGTCGCTGA 58.453 43.478 0.00 0.00 0.00 4.26
2557 4182 3.675225 CCGATCCATATTACTTGTCGCTG 59.325 47.826 0.00 0.00 0.00 5.18
2559 4184 3.673809 GTCCGATCCATATTACTTGTCGC 59.326 47.826 0.00 0.00 0.00 5.19
2560 4185 3.912563 CGTCCGATCCATATTACTTGTCG 59.087 47.826 0.00 0.00 0.00 4.35
2561 4186 4.022589 TCCGTCCGATCCATATTACTTGTC 60.023 45.833 0.00 0.00 0.00 3.18
2562 4187 3.893200 TCCGTCCGATCCATATTACTTGT 59.107 43.478 0.00 0.00 0.00 3.16
2563 4188 4.486090 CTCCGTCCGATCCATATTACTTG 58.514 47.826 0.00 0.00 0.00 3.16
2565 4190 2.492484 GCTCCGTCCGATCCATATTACT 59.508 50.000 0.00 0.00 0.00 2.24
2567 4192 1.822990 GGCTCCGTCCGATCCATATTA 59.177 52.381 0.00 0.00 0.00 0.98
2568 4193 0.608640 GGCTCCGTCCGATCCATATT 59.391 55.000 0.00 0.00 0.00 1.28
2569 4194 0.251832 AGGCTCCGTCCGATCCATAT 60.252 55.000 0.00 0.00 0.00 1.78
2570 4195 1.153061 AGGCTCCGTCCGATCCATA 59.847 57.895 0.00 0.00 0.00 2.74
2571 4196 2.123251 AGGCTCCGTCCGATCCAT 60.123 61.111 0.00 0.00 0.00 3.41
2572 4197 3.147595 CAGGCTCCGTCCGATCCA 61.148 66.667 0.00 0.00 0.00 3.41
2573 4198 3.917760 CCAGGCTCCGTCCGATCC 61.918 72.222 0.00 0.00 0.00 3.36
2574 4199 4.593864 GCCAGGCTCCGTCCGATC 62.594 72.222 3.29 0.00 0.00 3.69
2579 4204 2.202987 CATCAGCCAGGCTCCGTC 60.203 66.667 12.53 0.00 36.40 4.79
2580 4205 2.685017 TCATCAGCCAGGCTCCGT 60.685 61.111 12.53 0.00 36.40 4.69
2581 4206 2.108566 CTCATCAGCCAGGCTCCG 59.891 66.667 12.53 0.65 36.40 4.63
2582 4207 2.203181 GCTCATCAGCCAGGCTCC 60.203 66.667 12.53 0.00 40.14 4.70
2605 4245 5.557891 AATAGATTCACAAGCAACAGAGC 57.442 39.130 0.00 0.00 0.00 4.09
2632 4272 6.184789 TCGCCCCTATCTGATTTTACTTTTT 58.815 36.000 0.00 0.00 0.00 1.94
2633 4273 5.751586 TCGCCCCTATCTGATTTTACTTTT 58.248 37.500 0.00 0.00 0.00 2.27
2634 4274 5.367945 TCGCCCCTATCTGATTTTACTTT 57.632 39.130 0.00 0.00 0.00 2.66
2635 4275 4.743955 GCTCGCCCCTATCTGATTTTACTT 60.744 45.833 0.00 0.00 0.00 2.24
2636 4276 3.244249 GCTCGCCCCTATCTGATTTTACT 60.244 47.826 0.00 0.00 0.00 2.24
2637 4277 3.067833 GCTCGCCCCTATCTGATTTTAC 58.932 50.000 0.00 0.00 0.00 2.01
2638 4278 2.288825 CGCTCGCCCCTATCTGATTTTA 60.289 50.000 0.00 0.00 0.00 1.52
2639 4279 1.541233 CGCTCGCCCCTATCTGATTTT 60.541 52.381 0.00 0.00 0.00 1.82
2640 4280 0.034059 CGCTCGCCCCTATCTGATTT 59.966 55.000 0.00 0.00 0.00 2.17
2641 4281 1.668294 CGCTCGCCCCTATCTGATT 59.332 57.895 0.00 0.00 0.00 2.57
2642 4282 2.279069 CCGCTCGCCCCTATCTGAT 61.279 63.158 0.00 0.00 0.00 2.90
2658 4298 3.003480 GGAAGAAATGAGAACAGTCCCG 58.997 50.000 0.00 0.00 0.00 5.14
2659 4299 4.021102 TGGAAGAAATGAGAACAGTCCC 57.979 45.455 0.00 0.00 0.00 4.46
2660 4300 4.457257 CCTTGGAAGAAATGAGAACAGTCC 59.543 45.833 0.00 0.00 0.00 3.85
2662 4302 5.053978 ACCTTGGAAGAAATGAGAACAGT 57.946 39.130 0.00 0.00 0.00 3.55
2663 4303 6.211515 CAAACCTTGGAAGAAATGAGAACAG 58.788 40.000 0.00 0.00 0.00 3.16
2664 4304 6.147864 CAAACCTTGGAAGAAATGAGAACA 57.852 37.500 0.00 0.00 0.00 3.18
2679 4319 2.862541 TGTCACAGATCCCAAACCTTG 58.137 47.619 0.00 0.00 0.00 3.61
2739 4391 5.108668 CGTTTTCCGTTTCCAAAATAACGTC 60.109 40.000 0.00 0.00 44.03 4.34
2748 4400 1.401199 GACACCGTTTTCCGTTTCCAA 59.599 47.619 0.00 0.00 33.66 3.53
2749 4401 1.015868 GACACCGTTTTCCGTTTCCA 58.984 50.000 0.00 0.00 33.66 3.53
2757 4409 1.050767 CGAGACTCGACACCGTTTTC 58.949 55.000 20.25 0.00 43.74 2.29
2758 4410 0.318445 CCGAGACTCGACACCGTTTT 60.318 55.000 26.11 0.00 43.74 2.43
2759 4411 1.285023 CCGAGACTCGACACCGTTT 59.715 57.895 26.11 0.00 43.74 3.60
2762 4414 4.477975 GGCCGAGACTCGACACCG 62.478 72.222 26.11 9.89 43.74 4.94
2763 4415 3.063084 AGGCCGAGACTCGACACC 61.063 66.667 26.11 21.57 43.74 4.16
2766 4420 1.068885 CATATCAGGCCGAGACTCGAC 60.069 57.143 26.11 14.93 43.74 4.20
2777 4431 2.111878 ACCGGCAGCATATCAGGC 59.888 61.111 0.00 0.00 0.00 4.85
2792 4446 8.669243 GCCATAAAAGAGTATATAATCTGCACC 58.331 37.037 13.16 0.00 30.18 5.01
2794 4448 8.605947 AGGCCATAAAAGAGTATATAATCTGCA 58.394 33.333 13.16 2.91 30.18 4.41
2795 4449 9.454859 AAGGCCATAAAAGAGTATATAATCTGC 57.545 33.333 13.16 10.54 30.18 4.26
2807 4461 6.705863 AATAGCAGAAAGGCCATAAAAGAG 57.294 37.500 5.01 0.00 0.00 2.85
2808 4462 6.183360 CGAAATAGCAGAAAGGCCATAAAAGA 60.183 38.462 5.01 0.00 0.00 2.52
2811 4465 4.338118 CCGAAATAGCAGAAAGGCCATAAA 59.662 41.667 5.01 0.00 0.00 1.40
2814 4468 2.301346 CCGAAATAGCAGAAAGGCCAT 58.699 47.619 5.01 0.00 0.00 4.40
2816 4470 0.382158 GCCGAAATAGCAGAAAGGCC 59.618 55.000 0.00 0.00 37.32 5.19
2817 4471 1.094785 TGCCGAAATAGCAGAAAGGC 58.905 50.000 0.00 0.00 43.05 4.35
2818 4472 2.542411 GCATGCCGAAATAGCAGAAAGG 60.542 50.000 6.36 0.00 44.90 3.11
2819 4473 2.357009 AGCATGCCGAAATAGCAGAAAG 59.643 45.455 15.66 0.00 44.90 2.62
2821 4475 1.942657 GAGCATGCCGAAATAGCAGAA 59.057 47.619 15.66 0.00 44.90 3.02
2823 4477 1.590932 AGAGCATGCCGAAATAGCAG 58.409 50.000 15.66 0.00 44.90 4.24
2825 4479 3.427161 AAAAGAGCATGCCGAAATAGC 57.573 42.857 15.66 0.00 0.00 2.97
2826 4480 6.064846 ACATAAAAGAGCATGCCGAAATAG 57.935 37.500 15.66 1.20 0.00 1.73
2828 4482 4.989279 ACATAAAAGAGCATGCCGAAAT 57.011 36.364 15.66 0.72 0.00 2.17
2832 4540 6.142817 GGTAATAACATAAAAGAGCATGCCG 58.857 40.000 15.66 0.00 0.00 5.69
2867 4575 1.133792 ACTGTGAAAACAGGACCCAGG 60.134 52.381 10.40 0.00 41.76 4.45
2868 4576 2.158755 AGACTGTGAAAACAGGACCCAG 60.159 50.000 10.40 0.00 41.76 4.45
2870 4578 2.158813 TCAGACTGTGAAAACAGGACCC 60.159 50.000 10.40 0.00 41.76 4.46
2906 4633 4.325741 CAGAGAGAGCAAACGTAATGTCAG 59.674 45.833 0.00 0.00 0.00 3.51
2907 4634 4.022329 TCAGAGAGAGCAAACGTAATGTCA 60.022 41.667 0.00 0.00 0.00 3.58
2908 4635 4.486090 TCAGAGAGAGCAAACGTAATGTC 58.514 43.478 0.00 0.00 0.00 3.06
2915 4642 3.993081 ACAAAGATCAGAGAGAGCAAACG 59.007 43.478 0.00 0.00 34.30 3.60
2923 4651 5.131594 TCTGTCACACAAAGATCAGAGAG 57.868 43.478 0.00 0.00 0.00 3.20
2934 4662 0.107752 TGCTGCACTCTGTCACACAA 60.108 50.000 0.00 0.00 0.00 3.33
2938 4666 0.795085 GACATGCTGCACTCTGTCAC 59.205 55.000 23.02 4.47 38.28 3.67
3091 4819 4.139786 GGCCAAGCTCATGATTCTTATCA 58.860 43.478 0.00 0.00 44.52 2.15
3100 4828 0.107993 CGAAGAGGCCAAGCTCATGA 60.108 55.000 5.01 0.00 0.00 3.07
3124 4852 2.367202 ACCCAGATGGCCGTCGAAT 61.367 57.895 19.32 3.87 37.83 3.34
3324 5077 1.220477 GTCCAGAAGAGAGGCTGCC 59.780 63.158 11.65 11.65 0.00 4.85
3451 5204 2.624838 CCACATATCCTTGCCATCAACC 59.375 50.000 0.00 0.00 0.00 3.77
3589 5342 2.034558 AGGAAATGTTGTGACAAAGCCG 59.965 45.455 0.00 0.00 39.66 5.52
3920 5677 0.848942 CGATCCGAAGCATGAGAACG 59.151 55.000 0.00 0.00 0.00 3.95
3957 5714 4.889409 GTGGATGCCCAAATATCTTTCTCA 59.111 41.667 0.00 0.00 45.59 3.27
3958 5715 4.889409 TGTGGATGCCCAAATATCTTTCTC 59.111 41.667 0.00 0.00 45.59 2.87
3959 5716 4.870636 TGTGGATGCCCAAATATCTTTCT 58.129 39.130 0.00 0.00 45.59 2.52
3964 5721 4.768448 TCATGATGTGGATGCCCAAATATC 59.232 41.667 0.00 0.00 45.59 1.63
3995 5752 5.291971 TGAAGAAGCAAAATGAAAAGAGGC 58.708 37.500 0.00 0.00 0.00 4.70
4015 5772 9.950680 GTGAAAAGAAAGAATACAATGACTGAA 57.049 29.630 0.00 0.00 0.00 3.02
4022 5779 6.570378 CGCAGGGTGAAAAGAAAGAATACAAT 60.570 38.462 0.00 0.00 0.00 2.71
4030 5787 0.954452 AGCGCAGGGTGAAAAGAAAG 59.046 50.000 11.47 0.00 0.00 2.62
4040 5797 0.108585 TTCTTTTCAGAGCGCAGGGT 59.891 50.000 11.47 0.00 0.00 4.34
4047 5804 8.440833 CCAAATGATGATTTTTCTTTTCAGAGC 58.559 33.333 0.00 0.00 28.65 4.09
4057 5814 7.874528 AGAACTCCAACCAAATGATGATTTTTC 59.125 33.333 0.00 0.00 28.65 2.29
4244 6001 1.442184 CGACTTCACGAGGTCCACG 60.442 63.158 7.20 7.20 34.36 4.94
4370 6127 4.502105 TTGAAATGATCGGAGAATGGGA 57.498 40.909 0.00 0.00 43.58 4.37
4460 6217 9.811995 CTACTATAGGTACAAACAATAACAGCA 57.188 33.333 4.43 0.00 0.00 4.41
4496 6253 5.163591 CCATGCAATGTTCTAATCTCAAGCA 60.164 40.000 0.00 0.00 44.81 3.91
4504 6261 4.336433 CGTCTTCCCATGCAATGTTCTAAT 59.664 41.667 0.00 0.00 44.81 1.73
4776 6536 2.411547 GCATGACACTTGCACTACGTTC 60.412 50.000 0.00 0.00 39.90 3.95
4820 7978 5.818857 ACTTAGTAGCCGTGAAGTTCAAAAA 59.181 36.000 7.25 0.00 0.00 1.94
4821 7979 5.362263 ACTTAGTAGCCGTGAAGTTCAAAA 58.638 37.500 7.25 0.00 0.00 2.44
4834 7992 9.649167 TGTAGAACATCTTTTTACTTAGTAGCC 57.351 33.333 0.00 0.00 0.00 3.93
4855 8014 7.282224 ACTTTCAACACTATTTTGCACTGTAGA 59.718 33.333 5.67 0.00 0.00 2.59
4875 8034 4.415881 TTCAGTGAAGGTAGCACTTTCA 57.584 40.909 0.08 8.88 43.67 2.69
4947 8106 6.765403 TCCTTAGTTTTCGGATCTTCTCAAA 58.235 36.000 0.00 0.00 0.00 2.69
5036 8198 1.663911 TTCCCTGCCCTTAGTTAGCA 58.336 50.000 0.00 0.00 34.79 3.49
5106 9713 2.006888 CGTAAGTGTACCATTGCCCAG 58.993 52.381 0.00 0.00 0.00 4.45
5107 9714 2.102070 CGTAAGTGTACCATTGCCCA 57.898 50.000 0.00 0.00 0.00 5.36
5125 9732 6.546395 ACAGTAATTACGTAGAAGGTGTACG 58.454 40.000 9.91 3.69 46.94 3.67
5128 9735 8.526147 ACATAACAGTAATTACGTAGAAGGTGT 58.474 33.333 9.91 3.84 0.00 4.16
5129 9736 8.804743 CACATAACAGTAATTACGTAGAAGGTG 58.195 37.037 9.91 9.72 0.00 4.00
5130 9737 7.490402 GCACATAACAGTAATTACGTAGAAGGT 59.510 37.037 9.91 2.07 0.00 3.50
5131 9738 7.705325 AGCACATAACAGTAATTACGTAGAAGG 59.295 37.037 9.91 1.51 0.00 3.46
5132 9739 8.532341 CAGCACATAACAGTAATTACGTAGAAG 58.468 37.037 9.91 3.79 0.00 2.85
5133 9740 8.245491 TCAGCACATAACAGTAATTACGTAGAA 58.755 33.333 9.91 0.00 0.00 2.10
5134 9741 7.764331 TCAGCACATAACAGTAATTACGTAGA 58.236 34.615 9.91 4.42 0.00 2.59
5135 9742 7.980742 TCAGCACATAACAGTAATTACGTAG 57.019 36.000 9.91 7.02 0.00 3.51
5136 9743 7.977293 ACATCAGCACATAACAGTAATTACGTA 59.023 33.333 9.91 4.86 0.00 3.57
5137 9744 6.816640 ACATCAGCACATAACAGTAATTACGT 59.183 34.615 9.91 8.33 0.00 3.57
5138 9745 7.119360 CACATCAGCACATAACAGTAATTACG 58.881 38.462 9.91 7.74 0.00 3.18
5139 9746 7.409697 CCACATCAGCACATAACAGTAATTAC 58.590 38.462 7.57 7.57 0.00 1.89
5140 9747 6.038161 GCCACATCAGCACATAACAGTAATTA 59.962 38.462 0.00 0.00 0.00 1.40
5141 9748 5.163622 GCCACATCAGCACATAACAGTAATT 60.164 40.000 0.00 0.00 0.00 1.40
5142 9749 4.336433 GCCACATCAGCACATAACAGTAAT 59.664 41.667 0.00 0.00 0.00 1.89
5143 9750 3.689161 GCCACATCAGCACATAACAGTAA 59.311 43.478 0.00 0.00 0.00 2.24
5144 9751 3.270027 GCCACATCAGCACATAACAGTA 58.730 45.455 0.00 0.00 0.00 2.74
5145 9752 2.086869 GCCACATCAGCACATAACAGT 58.913 47.619 0.00 0.00 0.00 3.55
5146 9753 1.402968 GGCCACATCAGCACATAACAG 59.597 52.381 0.00 0.00 0.00 3.16
5147 9754 1.462616 GGCCACATCAGCACATAACA 58.537 50.000 0.00 0.00 0.00 2.41
5148 9755 0.740737 GGGCCACATCAGCACATAAC 59.259 55.000 4.39 0.00 32.41 1.89
5149 9756 0.747644 CGGGCCACATCAGCACATAA 60.748 55.000 4.39 0.00 31.20 1.90
5150 9757 1.153188 CGGGCCACATCAGCACATA 60.153 57.895 4.39 0.00 31.20 2.29
5151 9758 2.438975 CGGGCCACATCAGCACAT 60.439 61.111 4.39 0.00 31.20 3.21
5152 9759 2.482796 ATTCGGGCCACATCAGCACA 62.483 55.000 4.39 0.00 31.20 4.57
5153 9760 1.718757 GATTCGGGCCACATCAGCAC 61.719 60.000 4.39 0.00 0.00 4.40
5154 9761 1.451927 GATTCGGGCCACATCAGCA 60.452 57.895 4.39 0.00 0.00 4.41
5155 9762 1.031571 TTGATTCGGGCCACATCAGC 61.032 55.000 4.39 0.00 0.00 4.26
5156 9763 1.683943 ATTGATTCGGGCCACATCAG 58.316 50.000 4.39 0.00 0.00 2.90
5157 9764 1.750206 CAATTGATTCGGGCCACATCA 59.250 47.619 4.39 7.49 0.00 3.07
5158 9765 1.067516 CCAATTGATTCGGGCCACATC 59.932 52.381 7.12 4.53 0.00 3.06
5159 9766 1.113788 CCAATTGATTCGGGCCACAT 58.886 50.000 7.12 0.00 0.00 3.21
5160 9767 0.969917 CCCAATTGATTCGGGCCACA 60.970 55.000 7.12 0.00 31.89 4.17
5161 9768 1.815866 CCCAATTGATTCGGGCCAC 59.184 57.895 7.12 0.00 31.89 5.01
5162 9769 4.353325 CCCAATTGATTCGGGCCA 57.647 55.556 7.12 0.00 31.89 5.36
5165 9772 0.461135 CTTGGCCCAATTGATTCGGG 59.539 55.000 7.12 0.00 43.42 5.14
5166 9773 1.473258 TCTTGGCCCAATTGATTCGG 58.527 50.000 7.12 0.04 0.00 4.30
5167 9774 3.806625 AATCTTGGCCCAATTGATTCG 57.193 42.857 7.12 0.00 0.00 3.34
5168 9775 4.099881 TGCTAATCTTGGCCCAATTGATTC 59.900 41.667 12.71 3.30 33.25 2.52
5169 9776 4.032310 TGCTAATCTTGGCCCAATTGATT 58.968 39.130 13.58 13.58 33.25 2.57
5170 9777 3.640029 CTGCTAATCTTGGCCCAATTGAT 59.360 43.478 7.12 0.00 33.25 2.57
5171 9778 3.025978 CTGCTAATCTTGGCCCAATTGA 58.974 45.455 7.12 0.00 33.25 2.57
5172 9779 2.482490 GCTGCTAATCTTGGCCCAATTG 60.482 50.000 0.00 0.00 33.25 2.32
5173 9780 1.758862 GCTGCTAATCTTGGCCCAATT 59.241 47.619 0.00 0.00 33.25 2.32
5174 9781 1.063417 AGCTGCTAATCTTGGCCCAAT 60.063 47.619 0.00 0.00 33.25 3.16
5175 9782 0.332632 AGCTGCTAATCTTGGCCCAA 59.667 50.000 0.00 0.00 33.25 4.12
5176 9783 0.394762 CAGCTGCTAATCTTGGCCCA 60.395 55.000 0.00 0.00 33.25 5.36
5177 9784 1.732417 GCAGCTGCTAATCTTGGCCC 61.732 60.000 31.33 0.00 38.21 5.80
5178 9785 1.732308 GCAGCTGCTAATCTTGGCC 59.268 57.895 31.33 0.00 38.21 5.36
5179 9786 1.732308 GGCAGCTGCTAATCTTGGC 59.268 57.895 35.82 14.01 41.70 4.52
5180 9787 1.105759 GGGGCAGCTGCTAATCTTGG 61.106 60.000 35.82 0.00 41.70 3.61
5181 9788 1.105759 GGGGGCAGCTGCTAATCTTG 61.106 60.000 35.82 0.00 41.70 3.02
5182 9789 1.228510 GGGGGCAGCTGCTAATCTT 59.771 57.895 35.82 0.00 41.70 2.40
5183 9790 1.695597 AGGGGGCAGCTGCTAATCT 60.696 57.895 35.82 23.99 41.70 2.40
5184 9791 1.228094 GAGGGGGCAGCTGCTAATC 60.228 63.158 35.82 23.87 41.70 1.75
5185 9792 2.761465 GGAGGGGGCAGCTGCTAAT 61.761 63.158 35.82 20.39 41.70 1.73
5186 9793 3.411517 GGAGGGGGCAGCTGCTAA 61.412 66.667 35.82 0.00 41.70 3.09
5204 9811 1.379843 CCTGAATTCAACCCGGGGG 60.380 63.158 27.92 17.30 42.03 5.40
5205 9812 1.379843 CCCTGAATTCAACCCGGGG 60.380 63.158 27.92 12.73 39.87 5.73
5206 9813 1.379843 CCCCTGAATTCAACCCGGG 60.380 63.158 22.25 22.25 0.00 5.73
5207 9814 1.379843 CCCCCTGAATTCAACCCGG 60.380 63.158 9.88 7.02 0.00 5.73
5208 9815 2.052104 GCCCCCTGAATTCAACCCG 61.052 63.158 9.88 0.00 0.00 5.28
5209 9816 2.052104 CGCCCCCTGAATTCAACCC 61.052 63.158 9.88 0.00 0.00 4.11
5210 9817 1.304134 ACGCCCCCTGAATTCAACC 60.304 57.895 9.88 0.00 0.00 3.77
5211 9818 1.595093 CCACGCCCCCTGAATTCAAC 61.595 60.000 9.88 0.00 0.00 3.18
5212 9819 1.304052 CCACGCCCCCTGAATTCAA 60.304 57.895 9.88 0.00 0.00 2.69
5213 9820 2.196997 CTCCACGCCCCCTGAATTCA 62.197 60.000 8.12 8.12 0.00 2.57
5214 9821 1.452108 CTCCACGCCCCCTGAATTC 60.452 63.158 0.00 0.00 0.00 2.17
5215 9822 1.281925 ATCTCCACGCCCCCTGAATT 61.282 55.000 0.00 0.00 0.00 2.17
5216 9823 1.694169 ATCTCCACGCCCCCTGAAT 60.694 57.895 0.00 0.00 0.00 2.57
5217 9824 2.285368 ATCTCCACGCCCCCTGAA 60.285 61.111 0.00 0.00 0.00 3.02
5218 9825 2.896677 ATCATCTCCACGCCCCCTGA 62.897 60.000 0.00 0.00 0.00 3.86
5219 9826 2.446848 ATCATCTCCACGCCCCCTG 61.447 63.158 0.00 0.00 0.00 4.45
5220 9827 2.040464 ATCATCTCCACGCCCCCT 60.040 61.111 0.00 0.00 0.00 4.79
5221 9828 1.407656 TACATCATCTCCACGCCCCC 61.408 60.000 0.00 0.00 0.00 5.40
5222 9829 0.034059 CTACATCATCTCCACGCCCC 59.966 60.000 0.00 0.00 0.00 5.80
5223 9830 0.034059 CCTACATCATCTCCACGCCC 59.966 60.000 0.00 0.00 0.00 6.13
5224 9831 1.040646 TCCTACATCATCTCCACGCC 58.959 55.000 0.00 0.00 0.00 5.68
5225 9832 2.546795 CCTTCCTACATCATCTCCACGC 60.547 54.545 0.00 0.00 0.00 5.34
5226 9833 2.695666 ACCTTCCTACATCATCTCCACG 59.304 50.000 0.00 0.00 0.00 4.94
5227 9834 4.762289 AACCTTCCTACATCATCTCCAC 57.238 45.455 0.00 0.00 0.00 4.02
5228 9835 4.341235 CGTAACCTTCCTACATCATCTCCA 59.659 45.833 0.00 0.00 0.00 3.86
5229 9836 4.341520 ACGTAACCTTCCTACATCATCTCC 59.658 45.833 0.00 0.00 0.00 3.71
5230 9837 5.517322 ACGTAACCTTCCTACATCATCTC 57.483 43.478 0.00 0.00 0.00 2.75
5231 9838 6.606395 ACTTACGTAACCTTCCTACATCATCT 59.394 38.462 3.29 0.00 0.00 2.90
5232 9839 6.803642 ACTTACGTAACCTTCCTACATCATC 58.196 40.000 3.29 0.00 0.00 2.92
5233 9840 6.786967 ACTTACGTAACCTTCCTACATCAT 57.213 37.500 3.29 0.00 0.00 2.45
5234 9841 6.594788 AACTTACGTAACCTTCCTACATCA 57.405 37.500 3.29 0.00 0.00 3.07
5235 9842 9.591792 AATAAACTTACGTAACCTTCCTACATC 57.408 33.333 3.29 0.00 0.00 3.06
5237 9844 9.855021 GTAATAAACTTACGTAACCTTCCTACA 57.145 33.333 3.29 0.00 0.00 2.74
5238 9845 9.010366 CGTAATAAACTTACGTAACCTTCCTAC 57.990 37.037 3.29 2.55 41.79 3.18
5257 9864 8.632679 CCACACCTAGGTAAATCTACGTAATAA 58.367 37.037 15.80 0.00 30.16 1.40
5258 9865 7.255590 GCCACACCTAGGTAAATCTACGTAATA 60.256 40.741 15.80 0.00 30.16 0.98
5259 9866 6.462067 GCCACACCTAGGTAAATCTACGTAAT 60.462 42.308 15.80 0.00 30.16 1.89
5260 9867 5.163519 GCCACACCTAGGTAAATCTACGTAA 60.164 44.000 15.80 0.00 30.16 3.18
5261 9868 4.339247 GCCACACCTAGGTAAATCTACGTA 59.661 45.833 15.80 0.00 0.00 3.57
5262 9869 3.131755 GCCACACCTAGGTAAATCTACGT 59.868 47.826 15.80 2.41 0.00 3.57
5263 9870 3.131577 TGCCACACCTAGGTAAATCTACG 59.868 47.826 15.80 1.68 0.00 3.51
5264 9871 4.748277 TGCCACACCTAGGTAAATCTAC 57.252 45.455 15.80 1.38 0.00 2.59
5265 9872 5.968676 AATGCCACACCTAGGTAAATCTA 57.031 39.130 15.80 0.04 0.00 1.98
5266 9873 4.862641 AATGCCACACCTAGGTAAATCT 57.137 40.909 15.80 0.00 0.00 2.40
5267 9874 6.970484 CAATAATGCCACACCTAGGTAAATC 58.030 40.000 15.80 5.32 0.00 2.17
5268 9875 6.959639 CAATAATGCCACACCTAGGTAAAT 57.040 37.500 15.80 0.00 0.00 1.40
5315 9922 1.679680 CACCGGCTCCTACTTATTCGA 59.320 52.381 0.00 0.00 0.00 3.71
5330 9938 4.980903 GCTTGTTGCGCACACCGG 62.981 66.667 11.12 0.00 33.98 5.28
5424 10032 4.202367 ACTTCTTGTGGAGAACCCTAACTG 60.202 45.833 0.00 0.00 39.44 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.