Multiple sequence alignment - TraesCS2D01G425600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G425600 chr2D 100.000 5517 0 0 1 5517 537934068 537939584 0.000000e+00 10189
1 TraesCS2D01G425600 chr2D 87.114 551 47 15 4975 5517 537944746 537945280 2.200000e-168 603
2 TraesCS2D01G425600 chr2B 87.808 2756 209 52 689 3364 640687967 640690675 0.000000e+00 3110
3 TraesCS2D01G425600 chr2B 88.571 1295 88 28 3523 4799 640690763 640692015 0.000000e+00 1517
4 TraesCS2D01G425600 chr2B 93.468 643 41 1 54 696 640686500 640687141 0.000000e+00 953
5 TraesCS2D01G425600 chr2B 82.669 577 48 24 4977 5517 640741495 640742055 1.080000e-126 464
6 TraesCS2D01G425600 chr2B 83.204 387 27 13 5149 5517 640698819 640699185 2.480000e-83 320
7 TraesCS2D01G425600 chr2A 91.188 2088 105 30 1 2050 680272849 680274895 0.000000e+00 2763
8 TraesCS2D01G425600 chr2A 85.597 1340 140 30 2060 3364 680275898 680277219 0.000000e+00 1356
9 TraesCS2D01G425600 chr2A 87.702 618 61 7 3662 4277 680277621 680278225 0.000000e+00 706
10 TraesCS2D01G425600 chr2A 83.238 525 55 21 4975 5471 680285432 680285951 8.430000e-123 451
11 TraesCS2D01G425600 chr2A 93.772 289 11 5 4290 4575 680278333 680278617 1.420000e-115 427
12 TraesCS2D01G425600 chr2A 84.520 323 22 6 5209 5517 680279319 680279627 1.500000e-75 294
13 TraesCS2D01G425600 chr2A 93.789 161 9 1 3515 3674 680277298 680277458 1.990000e-59 241


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G425600 chr2D 537934068 537939584 5516 False 10189.0 10189 100.000 1 5517 1 chr2D.!!$F1 5516
1 TraesCS2D01G425600 chr2D 537944746 537945280 534 False 603.0 603 87.114 4975 5517 1 chr2D.!!$F2 542
2 TraesCS2D01G425600 chr2B 640686500 640692015 5515 False 1860.0 3110 89.949 54 4799 3 chr2B.!!$F3 4745
3 TraesCS2D01G425600 chr2B 640741495 640742055 560 False 464.0 464 82.669 4977 5517 1 chr2B.!!$F2 540
4 TraesCS2D01G425600 chr2A 680272849 680279627 6778 False 964.5 2763 89.428 1 5517 6 chr2A.!!$F2 5516
5 TraesCS2D01G425600 chr2A 680285432 680285951 519 False 451.0 451 83.238 4975 5471 1 chr2A.!!$F1 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.179045 CTAAAGATCCACGGGCCCTG 60.179 60.000 22.43 16.78 0.00 4.45 F
1231 2103 0.034198 TAGTTAGCCAACGTGCAGCA 59.966 50.000 7.37 0.00 39.78 4.41 F
2333 4236 0.675633 GCATGTGCCATGGTATTCCC 59.324 55.000 14.67 0.00 34.31 3.97 F
3958 6073 1.202557 ACTGGCAAAAACATGTGCTGG 60.203 47.619 0.00 0.00 40.70 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1766 2662 0.108585 TTCAGAAGCTTGCGGTCCTT 59.891 50.000 2.10 0.00 0.00 3.36 R
3018 4944 1.373748 CACCATGTTTGCAGGCTGC 60.374 57.895 31.91 31.91 45.29 5.25 R
4086 6201 0.248458 AAACAGCGCAACGAAACCAG 60.248 50.000 11.47 0.00 0.00 4.00 R
4831 7070 0.168128 GCGTCGGCACAGCTATTTTT 59.832 50.000 0.00 0.00 39.62 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.771978 GCAATGGGTTGGGAACGT 58.228 55.556 0.00 0.00 35.83 3.99
105 106 3.244911 TGTCTGGTTTCTTCTTCCCATCC 60.245 47.826 0.00 0.00 0.00 3.51
128 129 2.422519 GCTCCTCAATCACCACCATGAT 60.423 50.000 0.00 0.00 41.20 2.45
152 153 0.179045 CTAAAGATCCACGGGCCCTG 60.179 60.000 22.43 16.78 0.00 4.45
330 332 1.455383 CCAGTGCCAACCACCTTGTC 61.455 60.000 0.00 0.00 45.83 3.18
475 477 1.810532 CTCCTGCGAGGTACCTGAC 59.189 63.158 22.10 11.64 36.53 3.51
501 503 1.480219 GACGACGTCGCCATTGATCC 61.480 60.000 35.92 11.17 44.43 3.36
518 520 3.022914 CGATCTAACGCCGTCCGC 61.023 66.667 0.00 0.00 41.76 5.54
685 688 4.322499 CCGTAGCAGAGAAAGAAAACCCTA 60.322 45.833 0.00 0.00 0.00 3.53
687 690 4.984146 AGCAGAGAAAGAAAACCCTAGT 57.016 40.909 0.00 0.00 0.00 2.57
742 1577 3.438087 AGATCTTCCAATCACAACTTGCG 59.562 43.478 0.00 0.00 0.00 4.85
774 1616 3.721087 ACAGCTACAAACAGGCCTTAT 57.279 42.857 0.00 0.00 0.00 1.73
838 1686 6.153510 CCCAGGAGGAAAATAGGAAAAAGAAG 59.846 42.308 0.00 0.00 38.24 2.85
858 1706 3.776340 AGAAAACAAAATCCGTTGCGTT 58.224 36.364 0.00 0.00 31.29 4.84
1067 1922 3.227276 CTCCGGCGGCAGAGGTAT 61.227 66.667 23.83 0.00 0.00 2.73
1068 1923 2.762459 TCCGGCGGCAGAGGTATT 60.762 61.111 23.83 0.00 0.00 1.89
1069 1924 2.189521 CCGGCGGCAGAGGTATTT 59.810 61.111 15.42 0.00 0.00 1.40
1070 1925 1.044231 TCCGGCGGCAGAGGTATTTA 61.044 55.000 23.83 0.00 0.00 1.40
1071 1926 0.878961 CCGGCGGCAGAGGTATTTAC 60.879 60.000 15.42 0.00 0.00 2.01
1072 1927 0.104304 CGGCGGCAGAGGTATTTACT 59.896 55.000 10.53 0.00 0.00 2.24
1073 1928 1.867166 GGCGGCAGAGGTATTTACTC 58.133 55.000 3.07 0.00 35.20 2.59
1074 1929 1.413077 GGCGGCAGAGGTATTTACTCT 59.587 52.381 3.07 0.00 45.77 3.24
1075 1930 2.158943 GGCGGCAGAGGTATTTACTCTT 60.159 50.000 3.07 0.00 42.41 2.85
1107 1962 3.121058 CGTCGCATTTTGTTGGAAAATGG 60.121 43.478 17.29 10.16 43.92 3.16
1120 1975 3.269381 TGGAAAATGGCCAGATTCTAGGT 59.731 43.478 24.58 4.57 0.00 3.08
1124 1979 3.584733 ATGGCCAGATTCTAGGTTTCC 57.415 47.619 13.05 0.00 0.00 3.13
1131 1986 5.804771 GCCAGATTCTAGGTTTCCTGAAGTT 60.805 44.000 0.00 0.00 34.61 2.66
1154 2025 2.193536 GCCCGCTTCTGGTTTGTGT 61.194 57.895 0.00 0.00 0.00 3.72
1155 2026 1.654220 CCCGCTTCTGGTTTGTGTG 59.346 57.895 0.00 0.00 0.00 3.82
1158 2029 0.317269 CGCTTCTGGTTTGTGTGCTG 60.317 55.000 0.00 0.00 0.00 4.41
1175 2046 0.322277 CTGTGCTGCTCCATTCCAGT 60.322 55.000 0.00 0.00 0.00 4.00
1180 2051 1.457346 CTGCTCCATTCCAGTGTTCC 58.543 55.000 0.00 0.00 0.00 3.62
1218 2090 7.224949 GCCTTTACTGTCCTGCTAATTAGTTAG 59.775 40.741 13.91 11.81 40.25 2.34
1231 2103 0.034198 TAGTTAGCCAACGTGCAGCA 59.966 50.000 7.37 0.00 39.78 4.41
1232 2104 1.082104 GTTAGCCAACGTGCAGCAC 60.082 57.895 16.21 16.21 0.00 4.40
1233 2105 1.227823 TTAGCCAACGTGCAGCACT 60.228 52.632 23.15 7.76 31.34 4.40
1234 2106 1.506309 TTAGCCAACGTGCAGCACTG 61.506 55.000 23.15 17.87 31.34 3.66
1265 2143 4.142609 AGTAGCATAACTGACCATGTGG 57.857 45.455 0.00 0.00 42.17 4.17
1312 2198 2.804572 GCTTCACTCTCACTGTTCTGCA 60.805 50.000 0.00 0.00 0.00 4.41
1325 2211 4.927425 ACTGTTCTGCAATTCATTTGATGC 59.073 37.500 0.00 0.28 37.53 3.91
1336 2222 7.295201 CAATTCATTTGATGCTTGAAAGTTGG 58.705 34.615 0.00 0.00 37.53 3.77
1387 2281 2.420687 GGGGCATACTGTTCAGGAAGAG 60.421 54.545 4.79 4.79 37.67 2.85
1466 2360 9.143631 CAAACTGAATGGTAGATTTTCAATTCC 57.856 33.333 0.00 0.00 0.00 3.01
1495 2390 2.954316 TGCACTATTGTGTACTGACCG 58.046 47.619 9.05 0.00 45.44 4.79
1517 2412 7.609056 ACCGTTTGTATGTTTCATCTACTACT 58.391 34.615 0.00 0.00 0.00 2.57
1688 2583 4.161754 ACTGGTTGGTAGCTTAGGACATAC 59.838 45.833 0.00 0.00 0.00 2.39
2022 2918 0.730494 GCACGCACTTCAGCATTTCC 60.730 55.000 0.00 0.00 0.00 3.13
2042 3066 7.704789 TTTCCGTAGTCTGTTTCTCTTAAAC 57.295 36.000 0.00 0.00 0.00 2.01
2043 3067 5.455392 TCCGTAGTCTGTTTCTCTTAAACG 58.545 41.667 0.00 0.00 33.05 3.60
2114 4005 7.548097 TGTTTGTATGCTCCTTTTGTTTACAA 58.452 30.769 0.00 0.00 0.00 2.41
2115 4006 7.489757 TGTTTGTATGCTCCTTTTGTTTACAAC 59.510 33.333 0.00 0.00 35.28 3.32
2118 4009 7.144661 TGTATGCTCCTTTTGTTTACAACATG 58.855 34.615 0.00 0.00 41.79 3.21
2120 4011 3.740832 GCTCCTTTTGTTTACAACATGCC 59.259 43.478 0.00 0.00 41.79 4.40
2123 4026 5.983540 TCCTTTTGTTTACAACATGCCTTT 58.016 33.333 0.00 0.00 41.79 3.11
2159 4062 8.177119 TGTACTCCACAATTAATTTCAGCTTT 57.823 30.769 0.00 0.00 32.95 3.51
2204 4107 2.386661 ATCAGCCCTCTGTAACAACG 57.613 50.000 0.00 0.00 41.10 4.10
2333 4236 0.675633 GCATGTGCCATGGTATTCCC 59.324 55.000 14.67 0.00 34.31 3.97
2386 4289 2.546373 GCCTTTCTTGACATGCTTTGCA 60.546 45.455 0.00 0.00 44.86 4.08
2398 4301 3.207265 TGCTTTGCACCTACTTCAGAA 57.793 42.857 0.00 0.00 31.71 3.02
2400 4303 2.878406 GCTTTGCACCTACTTCAGAACA 59.122 45.455 0.00 0.00 0.00 3.18
2408 4311 5.562890 GCACCTACTTCAGAACATTTTCACC 60.563 44.000 0.00 0.00 33.72 4.02
2412 4315 3.003689 ACTTCAGAACATTTTCACCGCTG 59.996 43.478 0.00 0.00 33.72 5.18
2413 4316 2.571212 TCAGAACATTTTCACCGCTGT 58.429 42.857 0.00 0.00 33.72 4.40
2423 4326 3.394674 TTCACCGCTGTATTTCTGACA 57.605 42.857 0.00 0.00 0.00 3.58
2429 4332 6.597672 TCACCGCTGTATTTCTGACATAAATT 59.402 34.615 4.35 0.00 0.00 1.82
2492 4398 5.644977 TCGATGTCACTGTCTACTTGAAT 57.355 39.130 0.00 0.00 0.00 2.57
2511 4417 6.795098 TGAATGTACGTGTTTATGCTCTTT 57.205 33.333 0.00 0.00 0.00 2.52
2513 4419 5.796350 ATGTACGTGTTTATGCTCTTTCC 57.204 39.130 0.00 0.00 0.00 3.13
2516 4422 3.135994 ACGTGTTTATGCTCTTTCCGTT 58.864 40.909 0.00 0.00 0.00 4.44
2521 4427 6.464834 CGTGTTTATGCTCTTTCCGTTTAATC 59.535 38.462 0.00 0.00 0.00 1.75
2525 4431 7.857734 TTATGCTCTTTCCGTTTAATCATCA 57.142 32.000 0.00 0.00 0.00 3.07
2529 4435 6.876789 TGCTCTTTCCGTTTAATCATCACTTA 59.123 34.615 0.00 0.00 0.00 2.24
2586 4500 9.289782 AGTTTGATAATCAGCAAGTTATATCCC 57.710 33.333 0.00 0.00 30.42 3.85
2610 4524 4.088634 CTCCATTTCAGGGTTTTCATGGA 58.911 43.478 0.00 0.00 38.27 3.41
2625 4539 7.610305 GGTTTTCATGGAGATACCTCTAAAACA 59.390 37.037 14.16 0.00 38.16 2.83
2628 4542 8.964476 TTCATGGAGATACCTCTAAAACATTC 57.036 34.615 0.00 0.00 39.38 2.67
2631 4545 9.401058 CATGGAGATACCTCTAAAACATTCTTT 57.599 33.333 0.00 0.00 39.38 2.52
2653 4567 2.626266 TGTGGAGAAGTTGACGAAGCTA 59.374 45.455 0.00 0.00 0.00 3.32
2654 4568 3.246619 GTGGAGAAGTTGACGAAGCTAG 58.753 50.000 0.00 0.00 0.00 3.42
2673 4587 5.992217 AGCTAGTAAAAGACTTGTGAAGGTG 59.008 40.000 0.00 0.00 39.81 4.00
2696 4610 4.724036 GCATTACCTTTTCGCTAGAACACG 60.724 45.833 0.00 0.00 35.86 4.49
2700 4614 2.155155 CCTTTTCGCTAGAACACGTGTC 59.845 50.000 23.61 15.17 35.86 3.67
2701 4615 2.495409 TTTCGCTAGAACACGTGTCA 57.505 45.000 23.61 9.47 35.86 3.58
2707 4621 2.029728 GCTAGAACACGTGTCATGCATC 59.970 50.000 23.61 14.55 0.00 3.91
2721 4635 4.159135 GTCATGCATCTTCTTGGAACCATT 59.841 41.667 0.00 0.00 0.00 3.16
2734 4648 8.830201 TCTTGGAACCATTGTTTTTATTCATG 57.170 30.769 0.00 0.00 33.97 3.07
2738 4652 9.434420 TGGAACCATTGTTTTTATTCATGAATC 57.566 29.630 23.95 10.30 33.97 2.52
2741 4655 9.487790 AACCATTGTTTTTATTCATGAATCGTT 57.512 25.926 23.95 4.31 32.50 3.85
2771 4685 2.744202 CTGTGTGGCTAAAGTGATCCAC 59.256 50.000 3.49 3.49 46.78 4.02
2791 4705 4.394920 CCACGAGGAGCTAAAATAAAAGCA 59.605 41.667 0.00 0.00 41.32 3.91
2792 4706 5.324697 CACGAGGAGCTAAAATAAAAGCAC 58.675 41.667 0.00 0.00 41.32 4.40
2793 4707 5.122396 CACGAGGAGCTAAAATAAAAGCACT 59.878 40.000 0.00 0.00 41.32 4.40
2794 4708 6.312918 CACGAGGAGCTAAAATAAAAGCACTA 59.687 38.462 0.00 0.00 41.32 2.74
2814 4728 9.609346 AGCACTACTAGTTTCTAAACTTGAAAA 57.391 29.630 19.25 7.33 46.52 2.29
2866 4780 5.585844 CACTGCTTCCACCTTTTCAAATTTT 59.414 36.000 0.00 0.00 0.00 1.82
2876 4790 7.925483 CCACCTTTTCAAATTTTCTATGTGTCA 59.075 33.333 0.00 0.00 0.00 3.58
2877 4791 9.311916 CACCTTTTCAAATTTTCTATGTGTCAA 57.688 29.630 0.00 0.00 0.00 3.18
2903 4817 3.769844 ACACTAGATCGACCCAACTCATT 59.230 43.478 0.00 0.00 0.00 2.57
2909 4827 4.954202 AGATCGACCCAACTCATTACAGTA 59.046 41.667 0.00 0.00 0.00 2.74
2946 4865 6.127479 TGGCACAATGGTATATTTTGTTCTCC 60.127 38.462 0.00 0.00 31.48 3.71
2952 4871 9.316730 CAATGGTATATTTTGTTCTCCCAAATG 57.683 33.333 0.00 0.00 34.50 2.32
2960 4879 6.399639 TTTGTTCTCCCAAATGTAAACCTC 57.600 37.500 0.00 0.00 29.67 3.85
2961 4880 5.055265 TGTTCTCCCAAATGTAAACCTCA 57.945 39.130 0.00 0.00 0.00 3.86
2967 4886 7.466804 TCTCCCAAATGTAAACCTCAATAACT 58.533 34.615 0.00 0.00 0.00 2.24
2969 4888 8.570068 TCCCAAATGTAAACCTCAATAACTAC 57.430 34.615 0.00 0.00 0.00 2.73
2970 4889 8.387813 TCCCAAATGTAAACCTCAATAACTACT 58.612 33.333 0.00 0.00 0.00 2.57
2976 4895 9.871238 ATGTAAACCTCAATAACTACTACTGTG 57.129 33.333 0.00 0.00 0.00 3.66
2982 4908 7.344871 ACCTCAATAACTACTACTGTGGCTAAT 59.655 37.037 0.00 0.00 0.00 1.73
3053 4979 7.054491 ACATGGTGTGAGCTTTAAGAAAATT 57.946 32.000 0.00 0.00 0.00 1.82
3073 4999 9.952188 GAAAATTGGCAGAAGAATAAGGTATAC 57.048 33.333 0.00 0.00 0.00 1.47
3074 5000 9.474313 AAAATTGGCAGAAGAATAAGGTATACA 57.526 29.630 5.01 0.00 0.00 2.29
3102 5028 6.818644 TCTCACAGCATATTTAAGTCAAGGAC 59.181 38.462 0.00 0.00 0.00 3.85
3103 5029 6.472016 TCACAGCATATTTAAGTCAAGGACA 58.528 36.000 0.00 0.00 34.60 4.02
3104 5030 6.595326 TCACAGCATATTTAAGTCAAGGACAG 59.405 38.462 0.00 0.00 34.60 3.51
3105 5031 6.372659 CACAGCATATTTAAGTCAAGGACAGT 59.627 38.462 0.00 0.00 34.60 3.55
3108 5034 6.595716 AGCATATTTAAGTCAAGGACAGTCAC 59.404 38.462 2.17 0.00 34.60 3.67
3109 5035 6.371548 GCATATTTAAGTCAAGGACAGTCACA 59.628 38.462 2.17 0.00 34.60 3.58
3111 5037 8.607459 CATATTTAAGTCAAGGACAGTCACATC 58.393 37.037 2.17 0.00 34.60 3.06
3113 5039 6.911250 TTAAGTCAAGGACAGTCACATCTA 57.089 37.500 2.17 0.00 34.60 1.98
3114 5040 7.482169 TTAAGTCAAGGACAGTCACATCTAT 57.518 36.000 2.17 0.00 34.60 1.98
3115 5041 5.336150 AGTCAAGGACAGTCACATCTATG 57.664 43.478 2.17 0.00 34.60 2.23
3116 5042 5.019470 AGTCAAGGACAGTCACATCTATGA 58.981 41.667 2.17 0.00 34.60 2.15
3117 5043 5.660417 AGTCAAGGACAGTCACATCTATGAT 59.340 40.000 2.17 0.00 34.60 2.45
3118 5044 6.155910 AGTCAAGGACAGTCACATCTATGATT 59.844 38.462 2.17 0.00 34.60 2.57
3119 5045 7.343057 AGTCAAGGACAGTCACATCTATGATTA 59.657 37.037 2.17 0.00 34.60 1.75
3120 5046 8.147058 GTCAAGGACAGTCACATCTATGATTAT 58.853 37.037 2.17 0.00 32.09 1.28
3121 5047 9.367160 TCAAGGACAGTCACATCTATGATTATA 57.633 33.333 2.17 0.00 0.00 0.98
3122 5048 9.987272 CAAGGACAGTCACATCTATGATTATAA 57.013 33.333 2.17 0.00 0.00 0.98
3167 5093 7.156000 TGTGTTTTCGACCATATTTCTCACTA 58.844 34.615 0.00 0.00 0.00 2.74
3170 5096 9.529325 TGTTTTCGACCATATTTCTCACTATAG 57.471 33.333 0.00 0.00 0.00 1.31
3210 5136 4.407296 ACCCAAACTGTATCCTCTCAGATC 59.593 45.833 0.00 0.00 35.84 2.75
3213 5139 6.352565 CCCAAACTGTATCCTCTCAGATCTTT 60.353 42.308 0.00 0.00 35.84 2.52
3214 5140 6.538021 CCAAACTGTATCCTCTCAGATCTTTG 59.462 42.308 0.00 0.00 35.84 2.77
3242 5168 6.382869 CAAACATTGGAGAAGTCTTCTGTT 57.617 37.500 19.95 14.15 40.87 3.16
3243 5169 6.204359 CAAACATTGGAGAAGTCTTCTGTTG 58.796 40.000 19.95 12.75 40.87 3.33
3252 5178 6.017109 GGAGAAGTCTTCTGTTGCAAATACAA 60.017 38.462 19.95 0.00 40.87 2.41
3256 5182 7.042797 AGTCTTCTGTTGCAAATACAAACAT 57.957 32.000 0.00 0.00 0.00 2.71
3257 5183 8.165239 AGTCTTCTGTTGCAAATACAAACATA 57.835 30.769 0.00 0.00 0.00 2.29
3258 5184 8.292448 AGTCTTCTGTTGCAAATACAAACATAG 58.708 33.333 0.00 0.00 0.00 2.23
3259 5185 8.076178 GTCTTCTGTTGCAAATACAAACATAGT 58.924 33.333 0.00 0.00 0.00 2.12
3260 5186 8.075574 TCTTCTGTTGCAAATACAAACATAGTG 58.924 33.333 0.00 0.00 0.00 2.74
3261 5187 7.503521 TCTGTTGCAAATACAAACATAGTGA 57.496 32.000 0.00 0.00 0.00 3.41
3262 5188 7.359595 TCTGTTGCAAATACAAACATAGTGAC 58.640 34.615 0.00 0.00 0.00 3.67
3263 5189 7.012799 TCTGTTGCAAATACAAACATAGTGACA 59.987 33.333 0.00 0.00 0.00 3.58
3264 5190 7.484140 TGTTGCAAATACAAACATAGTGACAA 58.516 30.769 0.00 0.00 0.00 3.18
3272 5198 6.228273 ACAAACATAGTGACAATCGTCTTG 57.772 37.500 0.00 0.03 43.06 3.02
3274 5200 6.650807 ACAAACATAGTGACAATCGTCTTGAT 59.349 34.615 7.34 0.00 43.06 2.57
3280 5206 9.034544 CATAGTGACAATCGTCTTGATAAATGA 57.965 33.333 7.34 0.00 43.06 2.57
3281 5207 7.905604 AGTGACAATCGTCTTGATAAATGAA 57.094 32.000 7.34 0.00 43.06 2.57
3282 5208 7.743104 AGTGACAATCGTCTTGATAAATGAAC 58.257 34.615 7.34 0.00 43.06 3.18
3283 5209 7.387673 AGTGACAATCGTCTTGATAAATGAACA 59.612 33.333 7.34 0.00 43.06 3.18
3284 5210 8.177663 GTGACAATCGTCTTGATAAATGAACAT 58.822 33.333 7.34 0.00 43.06 2.71
3285 5211 9.377312 TGACAATCGTCTTGATAAATGAACATA 57.623 29.630 7.34 0.00 43.06 2.29
3286 5212 9.855361 GACAATCGTCTTGATAAATGAACATAG 57.145 33.333 7.34 0.00 39.22 2.23
3287 5213 9.383519 ACAATCGTCTTGATAAATGAACATAGT 57.616 29.630 7.34 0.00 35.84 2.12
3288 5214 9.855361 CAATCGTCTTGATAAATGAACATAGTC 57.145 33.333 0.00 0.00 35.84 2.59
3300 5229 4.523083 TGAACATAGTCACCTAAATGGGC 58.477 43.478 0.00 0.00 41.11 5.36
3305 5234 6.911308 ACATAGTCACCTAAATGGGCTAATT 58.089 36.000 0.00 0.00 41.11 1.40
3314 5243 5.127682 CCTAAATGGGCTAATTTGTGCTTCT 59.872 40.000 8.37 0.00 32.16 2.85
3316 5245 6.603940 AAATGGGCTAATTTGTGCTTCTAA 57.396 33.333 0.00 0.00 0.00 2.10
3318 5247 6.603940 ATGGGCTAATTTGTGCTTCTAAAA 57.396 33.333 0.00 0.00 0.00 1.52
3324 5253 9.418045 GGCTAATTTGTGCTTCTAAAATGTTAA 57.582 29.630 0.00 0.00 0.00 2.01
3364 5293 8.650143 AACTATCAAACACTACCATTTCCATT 57.350 30.769 0.00 0.00 0.00 3.16
3366 5295 9.396022 ACTATCAAACACTACCATTTCCATTAG 57.604 33.333 0.00 0.00 0.00 1.73
3367 5296 6.509418 TCAAACACTACCATTTCCATTAGC 57.491 37.500 0.00 0.00 0.00 3.09
3369 5298 6.150976 TCAAACACTACCATTTCCATTAGCTG 59.849 38.462 0.00 0.00 0.00 4.24
3372 5301 4.581824 CACTACCATTTCCATTAGCTGCAT 59.418 41.667 1.02 0.00 0.00 3.96
3373 5302 5.068198 CACTACCATTTCCATTAGCTGCATT 59.932 40.000 1.02 0.00 0.00 3.56
3374 5303 5.658190 ACTACCATTTCCATTAGCTGCATTT 59.342 36.000 1.02 0.00 0.00 2.32
3375 5304 5.014808 ACCATTTCCATTAGCTGCATTTC 57.985 39.130 1.02 0.00 0.00 2.17
3376 5305 4.467082 ACCATTTCCATTAGCTGCATTTCA 59.533 37.500 1.02 0.00 0.00 2.69
3377 5306 5.129815 ACCATTTCCATTAGCTGCATTTCAT 59.870 36.000 1.02 0.00 0.00 2.57
3378 5307 5.694910 CCATTTCCATTAGCTGCATTTCATC 59.305 40.000 1.02 0.00 0.00 2.92
3379 5308 4.924305 TTCCATTAGCTGCATTTCATCC 57.076 40.909 1.02 0.00 0.00 3.51
3380 5309 4.174704 TCCATTAGCTGCATTTCATCCT 57.825 40.909 1.02 0.00 0.00 3.24
3381 5310 3.887110 TCCATTAGCTGCATTTCATCCTG 59.113 43.478 1.02 0.00 0.00 3.86
3382 5311 3.635373 CCATTAGCTGCATTTCATCCTGT 59.365 43.478 1.02 0.00 0.00 4.00
3383 5312 4.823442 CCATTAGCTGCATTTCATCCTGTA 59.177 41.667 1.02 0.00 0.00 2.74
3384 5313 5.475909 CCATTAGCTGCATTTCATCCTGTAT 59.524 40.000 1.02 0.00 0.00 2.29
3385 5314 6.015688 CCATTAGCTGCATTTCATCCTGTATT 60.016 38.462 1.02 0.00 0.00 1.89
3386 5315 6.624352 TTAGCTGCATTTCATCCTGTATTC 57.376 37.500 1.02 0.00 0.00 1.75
3387 5316 4.529897 AGCTGCATTTCATCCTGTATTCA 58.470 39.130 1.02 0.00 0.00 2.57
3388 5317 4.951715 AGCTGCATTTCATCCTGTATTCAA 59.048 37.500 1.02 0.00 0.00 2.69
3389 5318 5.419788 AGCTGCATTTCATCCTGTATTCAAA 59.580 36.000 1.02 0.00 0.00 2.69
3390 5319 5.747197 GCTGCATTTCATCCTGTATTCAAAG 59.253 40.000 0.00 0.00 0.00 2.77
3391 5320 6.626623 GCTGCATTTCATCCTGTATTCAAAGT 60.627 38.462 0.00 0.00 0.00 2.66
3392 5321 7.230849 TGCATTTCATCCTGTATTCAAAGTT 57.769 32.000 0.00 0.00 0.00 2.66
3393 5322 7.315142 TGCATTTCATCCTGTATTCAAAGTTC 58.685 34.615 0.00 0.00 0.00 3.01
3394 5323 7.039853 TGCATTTCATCCTGTATTCAAAGTTCA 60.040 33.333 0.00 0.00 0.00 3.18
3395 5324 7.977853 GCATTTCATCCTGTATTCAAAGTTCAT 59.022 33.333 0.00 0.00 0.00 2.57
3396 5325 9.297586 CATTTCATCCTGTATTCAAAGTTCATG 57.702 33.333 0.00 0.00 0.00 3.07
3397 5326 6.441093 TCATCCTGTATTCAAAGTTCATGC 57.559 37.500 0.00 0.00 0.00 4.06
3398 5327 5.945191 TCATCCTGTATTCAAAGTTCATGCA 59.055 36.000 0.00 0.00 0.00 3.96
3399 5328 5.885230 TCCTGTATTCAAAGTTCATGCAG 57.115 39.130 0.00 0.00 32.21 4.41
3400 5329 5.316167 TCCTGTATTCAAAGTTCATGCAGT 58.684 37.500 0.00 0.00 30.89 4.40
3401 5330 5.769662 TCCTGTATTCAAAGTTCATGCAGTT 59.230 36.000 0.00 0.00 30.89 3.16
3402 5331 6.939730 TCCTGTATTCAAAGTTCATGCAGTTA 59.060 34.615 0.00 0.00 30.89 2.24
3403 5332 7.023575 CCTGTATTCAAAGTTCATGCAGTTAC 58.976 38.462 0.00 0.00 30.89 2.50
3404 5333 7.308529 CCTGTATTCAAAGTTCATGCAGTTACA 60.309 37.037 0.00 0.00 30.89 2.41
3405 5334 8.109705 TGTATTCAAAGTTCATGCAGTTACAT 57.890 30.769 0.00 0.00 0.00 2.29
3406 5335 9.225436 TGTATTCAAAGTTCATGCAGTTACATA 57.775 29.630 0.00 0.00 0.00 2.29
3409 5338 7.686438 TCAAAGTTCATGCAGTTACATATGT 57.314 32.000 13.93 13.93 0.00 2.29
3410 5339 7.529158 TCAAAGTTCATGCAGTTACATATGTG 58.471 34.615 18.81 2.61 0.00 3.21
3411 5340 7.174772 TCAAAGTTCATGCAGTTACATATGTGT 59.825 33.333 18.81 0.00 42.39 3.72
3412 5341 6.426980 AGTTCATGCAGTTACATATGTGTG 57.573 37.500 18.81 13.24 39.39 3.82
3413 5342 4.880886 TCATGCAGTTACATATGTGTGC 57.119 40.909 22.96 22.96 39.39 4.57
3414 5343 4.260170 TCATGCAGTTACATATGTGTGCA 58.740 39.130 29.30 29.30 41.45 4.57
3415 5344 4.699257 TCATGCAGTTACATATGTGTGCAA 59.301 37.500 30.14 19.77 40.97 4.08
3416 5345 4.683501 TGCAGTTACATATGTGTGCAAG 57.316 40.909 27.05 12.47 39.39 4.01
3417 5346 3.119884 TGCAGTTACATATGTGTGCAAGC 60.120 43.478 27.05 19.22 39.39 4.01
3418 5347 3.119884 GCAGTTACATATGTGTGCAAGCA 60.120 43.478 24.01 0.00 39.39 3.91
3419 5348 4.439153 GCAGTTACATATGTGTGCAAGCAT 60.439 41.667 24.01 8.92 39.39 3.79
3420 5349 5.268544 CAGTTACATATGTGTGCAAGCATC 58.731 41.667 18.81 0.00 39.39 3.91
3421 5350 4.943093 AGTTACATATGTGTGCAAGCATCA 59.057 37.500 18.81 1.80 39.39 3.07
3422 5351 5.591472 AGTTACATATGTGTGCAAGCATCAT 59.409 36.000 18.81 15.68 39.39 2.45
3423 5352 6.767423 AGTTACATATGTGTGCAAGCATCATA 59.233 34.615 18.81 17.91 39.39 2.15
3424 5353 7.282901 AGTTACATATGTGTGCAAGCATCATAA 59.717 33.333 18.81 0.00 39.39 1.90
3425 5354 5.824429 ACATATGTGTGCAAGCATCATAAC 58.176 37.500 7.78 7.15 37.14 1.89
3426 5355 5.591472 ACATATGTGTGCAAGCATCATAACT 59.409 36.000 7.78 9.79 37.14 2.24
3427 5356 3.835378 TGTGTGCAAGCATCATAACTG 57.165 42.857 0.00 0.00 0.00 3.16
3428 5357 2.488937 TGTGTGCAAGCATCATAACTGG 59.511 45.455 0.00 0.00 0.00 4.00
3429 5358 2.749076 GTGTGCAAGCATCATAACTGGA 59.251 45.455 0.00 0.00 0.00 3.86
3430 5359 3.191162 GTGTGCAAGCATCATAACTGGAA 59.809 43.478 0.00 0.00 0.00 3.53
3431 5360 3.441222 TGTGCAAGCATCATAACTGGAAG 59.559 43.478 0.00 0.00 42.29 3.46
3432 5361 3.691118 GTGCAAGCATCATAACTGGAAGA 59.309 43.478 0.00 0.00 37.43 2.87
3433 5362 4.337555 GTGCAAGCATCATAACTGGAAGAT 59.662 41.667 0.00 0.00 37.43 2.40
3434 5363 4.337274 TGCAAGCATCATAACTGGAAGATG 59.663 41.667 0.00 0.00 40.52 2.90
3435 5364 4.577693 GCAAGCATCATAACTGGAAGATGA 59.422 41.667 0.00 0.00 40.10 2.92
3436 5365 5.066893 GCAAGCATCATAACTGGAAGATGAA 59.933 40.000 0.00 0.00 40.10 2.57
3437 5366 6.238953 GCAAGCATCATAACTGGAAGATGAAT 60.239 38.462 0.00 0.00 40.10 2.57
3438 5367 7.683704 GCAAGCATCATAACTGGAAGATGAATT 60.684 37.037 0.00 0.00 40.10 2.17
3439 5368 7.507733 AGCATCATAACTGGAAGATGAATTC 57.492 36.000 0.00 0.00 40.10 2.17
3471 5400 9.751542 AGATAAGATCGACTCAATATTTTTCGT 57.248 29.630 8.99 0.00 0.00 3.85
3477 5406 7.285783 TCGACTCAATATTTTTCGTAACTGG 57.714 36.000 8.99 0.00 0.00 4.00
3478 5407 6.869913 TCGACTCAATATTTTTCGTAACTGGT 59.130 34.615 8.99 0.00 0.00 4.00
3484 5413 9.896263 TCAATATTTTTCGTAACTGGTTTAACC 57.104 29.630 7.27 7.27 39.22 2.85
3496 5425 4.277476 CTGGTTTAACCCAGCCATATCAA 58.723 43.478 12.02 0.00 45.19 2.57
3497 5426 4.678256 TGGTTTAACCCAGCCATATCAAA 58.322 39.130 12.02 0.00 37.50 2.69
3499 5428 5.362430 TGGTTTAACCCAGCCATATCAAATC 59.638 40.000 12.02 0.00 37.50 2.17
3506 5435 4.828939 CCCAGCCATATCAAATCTTGCTTA 59.171 41.667 0.00 0.00 0.00 3.09
3511 5440 8.761497 CAGCCATATCAAATCTTGCTTATTTTG 58.239 33.333 0.00 0.00 0.00 2.44
3637 5575 3.730715 GCAGAGTTTTTCATTCACAACCG 59.269 43.478 0.00 0.00 0.00 4.44
3766 5880 7.235606 TGTCCCCTACCATAATAGAATGAGAAG 59.764 40.741 0.00 0.00 0.00 2.85
3769 5883 7.880195 CCCCTACCATAATAGAATGAGAAGTTG 59.120 40.741 0.00 0.00 0.00 3.16
3788 5902 6.173427 AGTTGGCACCTATTTTCAAATGTT 57.827 33.333 0.00 0.00 0.00 2.71
3808 5922 5.050490 TGTTGAGCAAACTCTAGTGAAGAC 58.950 41.667 0.00 0.00 43.85 3.01
3826 5940 9.907723 AGTGAAGACTAGAGGATCACTCCAGAC 62.908 48.148 14.80 7.10 45.54 3.51
3848 5963 2.771372 TCTATTCAGCCCAGTGTGCATA 59.229 45.455 0.00 0.00 0.00 3.14
3883 5998 4.546674 TGGCTACAGACATTCTATCTGGA 58.453 43.478 6.92 0.00 46.60 3.86
3888 6003 7.441017 GCTACAGACATTCTATCTGGATTCTT 58.559 38.462 6.92 0.00 46.60 2.52
3921 6036 3.363970 CGTCCAGTTTCTTCAATTGGTCG 60.364 47.826 5.42 2.50 43.52 4.79
3942 6057 7.094975 TGGTCGTAATCACAATAAAGAAACTGG 60.095 37.037 0.00 0.00 0.00 4.00
3958 6073 1.202557 ACTGGCAAAAACATGTGCTGG 60.203 47.619 0.00 0.00 40.70 4.85
4005 6120 3.749981 CAGTCAGTGCCACCAACC 58.250 61.111 0.00 0.00 0.00 3.77
4023 6138 4.100529 CAACCAGCTGAGCATAAAATTCG 58.899 43.478 17.39 0.00 0.00 3.34
4060 6175 2.401583 TGAAGCAGGCATTATGTCGT 57.598 45.000 0.00 0.00 0.00 4.34
4061 6176 2.279741 TGAAGCAGGCATTATGTCGTC 58.720 47.619 0.00 0.00 0.00 4.20
4086 6201 4.622701 AGTTTCTGAAGTCAAGTGTTGC 57.377 40.909 0.00 0.00 0.00 4.17
4107 6222 0.028902 GGTTTCGTTGCGCTGTTTCT 59.971 50.000 9.73 0.00 0.00 2.52
4137 6252 2.279451 TTGATCCGATCTGCCGCG 60.279 61.111 9.78 0.00 0.00 6.46
4139 6254 2.279517 GATCCGATCTGCCGCGTT 60.280 61.111 4.92 0.00 0.00 4.84
4143 6258 2.677003 CCGATCTGCCGCGTTTGTT 61.677 57.895 4.92 0.00 0.00 2.83
4145 6260 1.225745 GATCTGCCGCGTTTGTTCG 60.226 57.895 4.92 0.00 0.00 3.95
4251 6366 2.927477 ACATTCACAATAGGTACGCACG 59.073 45.455 0.00 0.00 0.00 5.34
4258 6373 2.933906 CAATAGGTACGCACGGTTCATT 59.066 45.455 0.00 0.00 0.00 2.57
4269 6384 3.009723 CACGGTTCATTCTGCCAATACT 58.990 45.455 0.00 0.00 0.00 2.12
4273 6388 4.438744 CGGTTCATTCTGCCAATACTTTCC 60.439 45.833 0.00 0.00 0.00 3.13
4274 6389 4.706962 GGTTCATTCTGCCAATACTTTCCT 59.293 41.667 0.00 0.00 0.00 3.36
4275 6390 5.393461 GGTTCATTCTGCCAATACTTTCCTG 60.393 44.000 0.00 0.00 0.00 3.86
4276 6391 5.178096 TCATTCTGCCAATACTTTCCTGA 57.822 39.130 0.00 0.00 0.00 3.86
4277 6392 5.569355 TCATTCTGCCAATACTTTCCTGAA 58.431 37.500 0.00 0.00 0.00 3.02
4278 6393 6.189859 TCATTCTGCCAATACTTTCCTGAAT 58.810 36.000 0.00 0.00 0.00 2.57
4279 6394 6.319658 TCATTCTGCCAATACTTTCCTGAATC 59.680 38.462 0.00 0.00 0.00 2.52
4280 6395 4.526970 TCTGCCAATACTTTCCTGAATCC 58.473 43.478 0.00 0.00 0.00 3.01
4293 6513 7.558444 ACTTTCCTGAATCCTGAGTAGTAGTAG 59.442 40.741 0.00 0.00 0.00 2.57
4294 6514 6.578313 TCCTGAATCCTGAGTAGTAGTAGT 57.422 41.667 0.00 0.00 0.00 2.73
4295 6515 7.687383 TCCTGAATCCTGAGTAGTAGTAGTA 57.313 40.000 0.00 0.00 0.00 1.82
4296 6516 7.507829 TCCTGAATCCTGAGTAGTAGTAGTAC 58.492 42.308 7.01 7.01 0.00 2.73
4297 6517 7.347748 TCCTGAATCCTGAGTAGTAGTAGTACT 59.652 40.741 16.10 16.10 42.49 2.73
4339 6560 5.705905 AGCCAGGTTTGAGTATTTGACTTAC 59.294 40.000 0.00 0.00 39.06 2.34
4340 6561 5.390567 GCCAGGTTTGAGTATTTGACTTACG 60.391 44.000 0.00 0.00 39.06 3.18
4341 6562 5.390567 CCAGGTTTGAGTATTTGACTTACGC 60.391 44.000 0.00 0.00 39.06 4.42
4342 6563 5.408604 CAGGTTTGAGTATTTGACTTACGCT 59.591 40.000 0.00 0.00 39.06 5.07
4350 6572 1.282248 TTGACTTACGCTCGCTGTGC 61.282 55.000 0.00 0.00 0.00 4.57
4510 6738 0.809241 GCGCAGAGATCCTCACCAAG 60.809 60.000 0.30 0.00 32.06 3.61
4519 6747 1.279496 TCCTCACCAAGTGCTAGCAT 58.721 50.000 22.51 2.08 32.98 3.79
4520 6748 1.065926 TCCTCACCAAGTGCTAGCATG 60.066 52.381 22.51 15.91 32.98 4.06
4521 6749 0.731417 CTCACCAAGTGCTAGCATGC 59.269 55.000 22.51 10.51 32.98 4.06
4553 6781 0.389391 AAGGCATACGGATCCTGACG 59.611 55.000 10.75 0.00 0.00 4.35
4586 6815 8.239681 TCACGTGATTTCTTCTTATGTTGTAG 57.760 34.615 15.76 0.00 0.00 2.74
4587 6816 7.870954 TCACGTGATTTCTTCTTATGTTGTAGT 59.129 33.333 15.76 0.00 0.00 2.73
4589 6818 9.871238 ACGTGATTTCTTCTTATGTTGTAGTAT 57.129 29.630 0.00 0.00 0.00 2.12
4612 6841 2.034939 CCAAAGCATCACTGAAACAGCA 59.965 45.455 0.00 0.00 34.37 4.41
4613 6842 3.047796 CAAAGCATCACTGAAACAGCAC 58.952 45.455 0.00 0.00 34.37 4.40
4616 6845 1.511850 CATCACTGAAACAGCACCGA 58.488 50.000 0.00 0.00 34.37 4.69
4617 6846 2.079158 CATCACTGAAACAGCACCGAT 58.921 47.619 0.00 0.00 34.37 4.18
4663 6902 3.277962 CCAGGCTTCTTCTGGCATT 57.722 52.632 0.00 0.00 44.29 3.56
4664 6903 1.553706 CCAGGCTTCTTCTGGCATTT 58.446 50.000 0.00 0.00 44.29 2.32
4665 6904 2.726821 CCAGGCTTCTTCTGGCATTTA 58.273 47.619 0.00 0.00 44.29 1.40
4666 6905 2.686915 CCAGGCTTCTTCTGGCATTTAG 59.313 50.000 0.00 0.00 44.29 1.85
4667 6906 2.098770 CAGGCTTCTTCTGGCATTTAGC 59.901 50.000 0.00 0.00 44.65 3.09
4683 6922 0.693622 TAGCATCCCCGGTGTTTTGA 59.306 50.000 0.00 0.00 0.00 2.69
4696 6935 1.073373 TTTTGATGAACGGGGCCGA 59.927 52.632 0.00 0.00 42.83 5.54
4697 6936 0.958382 TTTTGATGAACGGGGCCGAG 60.958 55.000 0.00 0.00 42.83 4.63
4698 6937 2.813226 TTTGATGAACGGGGCCGAGG 62.813 60.000 0.00 0.00 42.83 4.63
4700 6939 2.768344 ATGAACGGGGCCGAGGAT 60.768 61.111 0.00 0.00 42.83 3.24
4701 6940 2.717139 GATGAACGGGGCCGAGGATC 62.717 65.000 0.00 0.00 42.83 3.36
4703 6942 3.447025 GAACGGGGCCGAGGATCTG 62.447 68.421 0.00 0.00 42.83 2.90
4710 6949 4.899239 CCGAGGATCTGCGTGGCC 62.899 72.222 0.00 0.00 0.00 5.36
4713 6952 1.823295 GAGGATCTGCGTGGCCTTA 59.177 57.895 3.32 0.00 0.00 2.69
4715 6954 1.220749 GGATCTGCGTGGCCTTACA 59.779 57.895 3.32 0.00 0.00 2.41
4716 6955 0.179045 GGATCTGCGTGGCCTTACAT 60.179 55.000 3.32 0.00 0.00 2.29
4718 6957 0.530650 ATCTGCGTGGCCTTACATCG 60.531 55.000 3.32 0.51 0.00 3.84
4719 6958 2.813179 CTGCGTGGCCTTACATCGC 61.813 63.158 3.32 11.18 45.70 4.58
4720 6959 3.925238 GCGTGGCCTTACATCGCG 61.925 66.667 3.32 0.00 37.74 5.87
4721 6960 3.261951 CGTGGCCTTACATCGCGG 61.262 66.667 6.13 0.00 0.00 6.46
4723 6962 2.171725 GTGGCCTTACATCGCGGAC 61.172 63.158 6.13 0.00 0.00 4.79
4724 6963 2.355986 TGGCCTTACATCGCGGACT 61.356 57.895 6.13 0.00 0.00 3.85
4725 6964 1.153429 GGCCTTACATCGCGGACTT 60.153 57.895 6.13 0.00 0.00 3.01
4726 6965 1.429148 GGCCTTACATCGCGGACTTG 61.429 60.000 6.13 1.75 0.00 3.16
4727 6966 2.006772 CCTTACATCGCGGACTTGC 58.993 57.895 6.13 0.00 0.00 4.01
4728 6967 1.429148 CCTTACATCGCGGACTTGCC 61.429 60.000 6.13 0.00 0.00 4.52
4737 6976 3.670377 GGACTTGCCGTTGGGTGC 61.670 66.667 0.00 0.00 34.97 5.01
4738 6977 2.904866 GACTTGCCGTTGGGTGCA 60.905 61.111 0.00 0.00 34.97 4.57
4739 6978 3.194272 GACTTGCCGTTGGGTGCAC 62.194 63.158 8.80 8.80 37.18 4.57
4744 6983 2.428187 CCGTTGGGTGCACTGGTA 59.572 61.111 17.98 0.00 0.00 3.25
4745 6984 1.002624 CCGTTGGGTGCACTGGTAT 60.003 57.895 17.98 0.00 0.00 2.73
4747 6986 1.243902 CGTTGGGTGCACTGGTATTT 58.756 50.000 17.98 0.00 0.00 1.40
4748 6987 1.199097 CGTTGGGTGCACTGGTATTTC 59.801 52.381 17.98 0.00 0.00 2.17
4749 6988 1.199097 GTTGGGTGCACTGGTATTTCG 59.801 52.381 17.98 0.00 0.00 3.46
4750 6989 0.398696 TGGGTGCACTGGTATTTCGT 59.601 50.000 17.98 0.00 0.00 3.85
4751 6990 1.084289 GGGTGCACTGGTATTTCGTC 58.916 55.000 17.98 0.00 0.00 4.20
4752 6991 0.719465 GGTGCACTGGTATTTCGTCG 59.281 55.000 17.98 0.00 0.00 5.12
4756 6995 0.108329 CACTGGTATTTCGTCGGCCT 60.108 55.000 0.00 0.00 0.00 5.19
4757 6996 0.108329 ACTGGTATTTCGTCGGCCTG 60.108 55.000 0.00 0.00 0.00 4.85
4758 6997 0.810031 CTGGTATTTCGTCGGCCTGG 60.810 60.000 0.00 0.00 0.00 4.45
4760 6999 1.219935 GTATTTCGTCGGCCTGGGT 59.780 57.895 0.00 0.00 0.00 4.51
4762 7001 2.246761 TATTTCGTCGGCCTGGGTGG 62.247 60.000 0.00 0.00 39.35 4.61
4786 7025 3.106407 GAGCACGAGCACGACCAC 61.106 66.667 11.40 0.00 45.49 4.16
4798 7037 4.699522 GACCACCGCCAGTCCACC 62.700 72.222 0.00 0.00 0.00 4.61
4800 7039 3.000819 CCACCGCCAGTCCACCTA 61.001 66.667 0.00 0.00 0.00 3.08
4804 7043 2.579657 CCGCCAGTCCACCTACACA 61.580 63.158 0.00 0.00 0.00 3.72
4805 7044 1.369692 CGCCAGTCCACCTACACAA 59.630 57.895 0.00 0.00 0.00 3.33
4806 7045 0.949105 CGCCAGTCCACCTACACAAC 60.949 60.000 0.00 0.00 0.00 3.32
4807 7046 0.396811 GCCAGTCCACCTACACAACT 59.603 55.000 0.00 0.00 0.00 3.16
4809 7048 1.971357 CCAGTCCACCTACACAACTCT 59.029 52.381 0.00 0.00 0.00 3.24
4811 7050 3.181454 CCAGTCCACCTACACAACTCTTT 60.181 47.826 0.00 0.00 0.00 2.52
4812 7051 4.058817 CAGTCCACCTACACAACTCTTTC 58.941 47.826 0.00 0.00 0.00 2.62
4813 7052 3.967987 AGTCCACCTACACAACTCTTTCT 59.032 43.478 0.00 0.00 0.00 2.52
4814 7053 4.409247 AGTCCACCTACACAACTCTTTCTT 59.591 41.667 0.00 0.00 0.00 2.52
4815 7054 4.750598 GTCCACCTACACAACTCTTTCTTC 59.249 45.833 0.00 0.00 0.00 2.87
4816 7055 4.407621 TCCACCTACACAACTCTTTCTTCA 59.592 41.667 0.00 0.00 0.00 3.02
4817 7056 5.104693 TCCACCTACACAACTCTTTCTTCAA 60.105 40.000 0.00 0.00 0.00 2.69
4819 7058 5.584649 CACCTACACAACTCTTTCTTCAACA 59.415 40.000 0.00 0.00 0.00 3.33
4820 7059 6.093495 CACCTACACAACTCTTTCTTCAACAA 59.907 38.462 0.00 0.00 0.00 2.83
4821 7060 6.828785 ACCTACACAACTCTTTCTTCAACAAT 59.171 34.615 0.00 0.00 0.00 2.71
4822 7061 7.339466 ACCTACACAACTCTTTCTTCAACAATT 59.661 33.333 0.00 0.00 0.00 2.32
4824 7063 9.573133 CTACACAACTCTTTCTTCAACAATTTT 57.427 29.630 0.00 0.00 0.00 1.82
4851 7119 1.966493 AAAATAGCTGTGCCGACGCG 61.966 55.000 3.53 3.53 38.08 6.01
4852 7120 3.642778 AATAGCTGTGCCGACGCGT 62.643 57.895 13.85 13.85 38.08 6.01
4874 7142 4.025401 CCGTGGACCTTTGCGTGC 62.025 66.667 0.00 0.00 0.00 5.34
4877 7145 4.196778 TGGACCTTTGCGTGCCCA 62.197 61.111 0.00 0.00 0.00 5.36
4879 7147 1.377987 GGACCTTTGCGTGCCCATA 60.378 57.895 0.00 0.00 0.00 2.74
4882 7150 1.750399 CCTTTGCGTGCCCATAGCT 60.750 57.895 0.00 0.00 44.23 3.32
4887 7166 2.590007 CGTGCCCATAGCTGAGCC 60.590 66.667 0.00 0.00 44.23 4.70
4888 7167 2.203266 GTGCCCATAGCTGAGCCC 60.203 66.667 0.00 0.00 44.23 5.19
4911 7191 1.081442 GCGCGGGGAGAACAAAAAG 60.081 57.895 8.83 0.00 0.00 2.27
4923 7203 1.119684 ACAAAAAGTTGGGTGGGAGC 58.880 50.000 0.00 0.00 39.22 4.70
4924 7204 0.392706 CAAAAAGTTGGGTGGGAGCC 59.607 55.000 0.00 0.00 36.00 4.70
4926 7206 2.292785 AAAAGTTGGGTGGGAGCCGT 62.293 55.000 0.00 0.00 38.98 5.68
4937 7217 3.479269 GAGCCGTCGCGTTGGAAG 61.479 66.667 20.68 0.00 41.18 3.46
4940 7220 3.777925 CCGTCGCGTTGGAAGCTG 61.778 66.667 5.77 0.00 0.00 4.24
4941 7221 3.777925 CGTCGCGTTGGAAGCTGG 61.778 66.667 5.77 0.00 0.00 4.85
4942 7222 3.423154 GTCGCGTTGGAAGCTGGG 61.423 66.667 5.77 0.00 0.00 4.45
4973 7253 0.320073 CCTGGTAGTGGTTTTCGCGA 60.320 55.000 3.71 3.71 0.00 5.87
4975 7255 0.947180 TGGTAGTGGTTTTCGCGAGC 60.947 55.000 9.59 3.75 0.00 5.03
5143 7434 3.586039 CGTACGTACGTGGAATCGT 57.414 52.632 33.95 3.43 44.13 3.73
5199 7491 3.408634 GAAGATGGAAAAACCTGTCGGA 58.591 45.455 0.00 0.00 39.86 4.55
5212 7504 0.821517 TGTCGGATAACCACGCAGAT 59.178 50.000 0.00 0.00 35.59 2.90
5222 7550 7.324178 GGATAACCACGCAGATATATTCTTCT 58.676 38.462 0.00 0.00 35.97 2.85
5225 7553 4.519350 ACCACGCAGATATATTCTTCTCGA 59.481 41.667 0.00 0.00 29.93 4.04
5226 7554 5.009710 ACCACGCAGATATATTCTTCTCGAA 59.990 40.000 0.00 0.00 35.78 3.71
5227 7555 5.920840 CCACGCAGATATATTCTTCTCGAAA 59.079 40.000 0.00 0.00 34.79 3.46
5228 7556 6.420903 CCACGCAGATATATTCTTCTCGAAAA 59.579 38.462 0.00 0.00 34.79 2.29
5229 7557 7.358765 CCACGCAGATATATTCTTCTCGAAAAG 60.359 40.741 0.00 0.00 34.79 2.27
5230 7558 7.379797 CACGCAGATATATTCTTCTCGAAAAGA 59.620 37.037 0.00 0.00 34.79 2.52
5231 7559 7.921214 ACGCAGATATATTCTTCTCGAAAAGAA 59.079 33.333 15.87 15.87 46.31 2.52
5346 7701 2.445085 AGGACACGGACCACCACA 60.445 61.111 0.00 0.00 35.59 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.027561 CCACGACCTCCCAGATTTGTAA 60.028 50.000 0.00 0.00 0.00 2.41
105 106 0.325933 TGGTGGTGATTGAGGAGCAG 59.674 55.000 0.00 0.00 0.00 4.24
128 129 2.037144 GCCCGTGGATCTTTAGAGGTA 58.963 52.381 0.00 0.00 0.00 3.08
152 153 0.729116 CTGGAACCACGTCATGCATC 59.271 55.000 0.00 0.00 0.00 3.91
198 199 4.117685 GTGAGGTAGACGACAACTTGTTT 58.882 43.478 0.00 0.00 0.00 2.83
253 254 4.518970 TGCTTTTAAGGACACCATGAAGTC 59.481 41.667 8.47 8.47 0.00 3.01
340 342 3.021695 CGGGGGAGGAAATTTCTAAACC 58.978 50.000 17.42 13.95 0.00 3.27
344 346 1.591768 AGCGGGGGAGGAAATTTCTA 58.408 50.000 17.42 0.00 0.00 2.10
475 477 3.186047 GCGACGTCGTCAATGGGG 61.186 66.667 35.48 8.32 42.22 4.96
501 503 3.022914 GCGGACGGCGTTAGATCG 61.023 66.667 16.19 14.21 0.00 3.69
518 520 0.655733 GACAACACTGTTGGTGACGG 59.344 55.000 22.91 0.02 44.00 4.79
525 527 1.831389 CGGCCTCGACAACACTGTTG 61.831 60.000 18.59 18.59 38.19 3.33
527 529 2.029073 CGGCCTCGACAACACTGT 59.971 61.111 0.00 0.00 38.98 3.55
538 540 4.176752 GTCCATCCACCCGGCCTC 62.177 72.222 0.00 0.00 0.00 4.70
661 664 2.159824 GGTTTTCTTTCTCTGCTACGGC 59.840 50.000 0.00 0.00 39.26 5.68
664 667 5.795972 ACTAGGGTTTTCTTTCTCTGCTAC 58.204 41.667 0.00 0.00 0.00 3.58
838 1686 3.360289 CGAACGCAACGGATTTTGTTTTC 60.360 43.478 0.00 0.00 0.00 2.29
858 1706 6.636705 ACACTGCAAAAGGATAATACTACGA 58.363 36.000 0.00 0.00 0.00 3.43
1067 1922 1.822990 ACGATGCGGGAGAAGAGTAAA 59.177 47.619 0.00 0.00 0.00 2.01
1068 1923 1.404391 GACGATGCGGGAGAAGAGTAA 59.596 52.381 0.00 0.00 0.00 2.24
1069 1924 1.022735 GACGATGCGGGAGAAGAGTA 58.977 55.000 0.00 0.00 0.00 2.59
1070 1925 1.810532 GACGATGCGGGAGAAGAGT 59.189 57.895 0.00 0.00 0.00 3.24
1071 1926 1.298713 CGACGATGCGGGAGAAGAG 60.299 63.158 0.00 0.00 0.00 2.85
1072 1927 2.798689 CGACGATGCGGGAGAAGA 59.201 61.111 0.00 0.00 0.00 2.87
1073 1928 2.956964 GCGACGATGCGGGAGAAG 60.957 66.667 0.00 0.00 0.00 2.85
1074 1929 2.572095 AATGCGACGATGCGGGAGAA 62.572 55.000 0.00 0.00 37.81 2.87
1075 1930 2.572095 AAATGCGACGATGCGGGAGA 62.572 55.000 0.00 0.00 37.81 3.71
1107 1962 3.914426 TCAGGAAACCTAGAATCTGGC 57.086 47.619 0.00 0.00 29.64 4.85
1120 1975 1.314730 GGGCGACAAACTTCAGGAAA 58.685 50.000 0.00 0.00 0.00 3.13
1124 1979 1.507141 AAGCGGGCGACAAACTTCAG 61.507 55.000 0.00 0.00 0.00 3.02
1131 1986 2.951475 AAACCAGAAGCGGGCGACAA 62.951 55.000 0.00 0.00 0.00 3.18
1154 2025 1.676635 GGAATGGAGCAGCACAGCA 60.677 57.895 0.00 0.00 36.85 4.41
1155 2026 1.654954 CTGGAATGGAGCAGCACAGC 61.655 60.000 0.00 0.00 0.00 4.40
1158 2029 0.607489 ACACTGGAATGGAGCAGCAC 60.607 55.000 0.00 0.00 0.00 4.40
1189 2060 2.399356 GCAGGACAGTAAAGGCGGC 61.399 63.158 0.00 0.00 0.00 6.53
1190 2061 0.535335 TAGCAGGACAGTAAAGGCGG 59.465 55.000 0.00 0.00 0.00 6.13
1192 2063 5.429130 ACTAATTAGCAGGACAGTAAAGGC 58.571 41.667 12.54 0.00 0.00 4.35
1193 2064 8.649973 CTAACTAATTAGCAGGACAGTAAAGG 57.350 38.462 12.54 0.00 31.71 3.11
1231 2103 6.147821 CAGTTATGCTACTTGTAAACTGCAGT 59.852 38.462 15.25 15.25 37.91 4.40
1232 2104 6.368791 TCAGTTATGCTACTTGTAAACTGCAG 59.631 38.462 13.48 13.48 42.10 4.41
1233 2105 6.147164 GTCAGTTATGCTACTTGTAAACTGCA 59.853 38.462 13.79 6.57 42.10 4.41
1234 2106 6.402226 GGTCAGTTATGCTACTTGTAAACTGC 60.402 42.308 13.79 10.56 42.10 4.40
1235 2107 6.649141 TGGTCAGTTATGCTACTTGTAAACTG 59.351 38.462 12.97 12.97 43.15 3.16
1236 2108 6.765403 TGGTCAGTTATGCTACTTGTAAACT 58.235 36.000 0.00 0.00 0.00 2.66
1237 2109 7.119262 ACATGGTCAGTTATGCTACTTGTAAAC 59.881 37.037 0.00 0.00 0.00 2.01
1238 2110 7.119116 CACATGGTCAGTTATGCTACTTGTAAA 59.881 37.037 0.00 0.00 0.00 2.01
1312 2198 7.218614 TCCAACTTTCAAGCATCAAATGAATT 58.781 30.769 0.00 0.00 33.45 2.17
1336 2222 7.667043 TCATAACCACATACTGACAAAGTTC 57.333 36.000 0.00 0.00 40.56 3.01
1343 2229 5.928839 CCTAGCATCATAACCACATACTGAC 59.071 44.000 0.00 0.00 0.00 3.51
1688 2583 1.003545 CGTTGAGTTCAGTGGCACTTG 60.004 52.381 19.43 13.61 0.00 3.16
1766 2662 0.108585 TTCAGAAGCTTGCGGTCCTT 59.891 50.000 2.10 0.00 0.00 3.36
2022 2918 7.589221 AGTTACGTTTAAGAGAAACAGACTACG 59.411 37.037 0.00 0.00 0.00 3.51
2042 3066 3.551890 GGTGATGCAGTGACATAGTTACG 59.448 47.826 0.00 0.00 0.00 3.18
2043 3067 4.503910 TGGTGATGCAGTGACATAGTTAC 58.496 43.478 0.00 0.00 0.00 2.50
2134 4037 7.759489 AAGCTGAAATTAATTGTGGAGTACA 57.241 32.000 0.39 0.00 37.56 2.90
2135 4038 9.774742 CTAAAGCTGAAATTAATTGTGGAGTAC 57.225 33.333 0.39 0.00 0.00 2.73
2204 4107 4.098416 GCACTGCTTTATCAATTTCGTCC 58.902 43.478 0.00 0.00 0.00 4.79
2386 4289 4.755123 CGGTGAAAATGTTCTGAAGTAGGT 59.245 41.667 0.00 0.00 34.60 3.08
2398 4301 4.759693 TCAGAAATACAGCGGTGAAAATGT 59.240 37.500 23.44 6.68 0.00 2.71
2400 4303 4.759693 TGTCAGAAATACAGCGGTGAAAAT 59.240 37.500 23.44 8.73 0.00 1.82
2492 4398 3.676172 CGGAAAGAGCATAAACACGTACA 59.324 43.478 0.00 0.00 0.00 2.90
2511 4417 6.537301 GTGATGGTAAGTGATGATTAAACGGA 59.463 38.462 0.00 0.00 0.00 4.69
2513 4419 7.539712 AGTGATGGTAAGTGATGATTAAACG 57.460 36.000 0.00 0.00 0.00 3.60
2516 4422 7.864108 CCAAGTGATGGTAAGTGATGATTAA 57.136 36.000 0.00 0.00 44.85 1.40
2544 4450 6.822667 ATCAAACTGAAGTGCACATTGATA 57.177 33.333 21.04 0.00 36.07 2.15
2548 4454 7.218228 TGATTATCAAACTGAAGTGCACATT 57.782 32.000 21.04 10.39 0.00 2.71
2586 4500 4.159135 CCATGAAAACCCTGAAATGGAGAG 59.841 45.833 0.00 0.00 37.36 3.20
2610 4524 9.014297 CCACAAAAGAATGTTTTAGAGGTATCT 57.986 33.333 0.00 0.00 39.75 1.98
2625 4539 5.123227 TCGTCAACTTCTCCACAAAAGAAT 58.877 37.500 0.00 0.00 32.56 2.40
2628 4542 4.786609 GCTTCGTCAACTTCTCCACAAAAG 60.787 45.833 0.00 0.00 0.00 2.27
2631 4545 2.158957 AGCTTCGTCAACTTCTCCACAA 60.159 45.455 0.00 0.00 0.00 3.33
2653 4567 4.523083 TGCACCTTCACAAGTCTTTTACT 58.477 39.130 0.00 0.00 41.49 2.24
2654 4568 4.893424 TGCACCTTCACAAGTCTTTTAC 57.107 40.909 0.00 0.00 0.00 2.01
2673 4587 4.648970 GTGTTCTAGCGAAAAGGTAATGC 58.351 43.478 0.00 0.00 31.75 3.56
2686 4600 1.428448 TGCATGACACGTGTTCTAGC 58.572 50.000 24.26 22.55 0.00 3.42
2687 4601 3.515630 AGATGCATGACACGTGTTCTAG 58.484 45.455 24.26 14.00 0.00 2.43
2696 4610 3.119708 GGTTCCAAGAAGATGCATGACAC 60.120 47.826 2.46 0.00 0.00 3.67
2700 4614 4.081862 ACAATGGTTCCAAGAAGATGCATG 60.082 41.667 2.46 0.00 0.00 4.06
2701 4615 4.091549 ACAATGGTTCCAAGAAGATGCAT 58.908 39.130 0.00 0.00 0.00 3.96
2707 4621 8.885494 TGAATAAAAACAATGGTTCCAAGAAG 57.115 30.769 0.00 0.00 35.82 2.85
2763 4677 2.961526 TTTAGCTCCTCGTGGATCAC 57.038 50.000 6.68 0.15 42.29 3.06
2771 4685 5.803020 AGTGCTTTTATTTTAGCTCCTCG 57.197 39.130 0.00 0.00 38.22 4.63
2814 4728 9.874205 CTGAATTAACACATGGGAAAAATACAT 57.126 29.630 0.00 0.00 0.00 2.29
2826 4740 5.618056 AGCAGTGACTGAATTAACACATG 57.382 39.130 18.18 0.00 35.97 3.21
2839 4753 2.092429 TGAAAAGGTGGAAGCAGTGACT 60.092 45.455 0.00 0.00 36.26 3.41
2876 4790 6.070995 TGAGTTGGGTCGATCTAGTGTAAATT 60.071 38.462 0.00 0.00 0.00 1.82
2877 4791 5.421056 TGAGTTGGGTCGATCTAGTGTAAAT 59.579 40.000 0.00 0.00 0.00 1.40
2886 4800 3.769844 ACTGTAATGAGTTGGGTCGATCT 59.230 43.478 0.00 0.00 0.00 2.75
2888 4802 5.871396 ATACTGTAATGAGTTGGGTCGAT 57.129 39.130 0.00 0.00 0.00 3.59
2891 4805 9.477484 CATAGTTATACTGTAATGAGTTGGGTC 57.523 37.037 0.00 0.00 0.00 4.46
2903 4817 9.845740 ATTGTGCCATTTCATAGTTATACTGTA 57.154 29.630 0.00 0.00 0.00 2.74
2909 4827 8.710749 ATACCATTGTGCCATTTCATAGTTAT 57.289 30.769 0.00 0.00 0.00 1.89
2926 4844 9.316730 CATTTGGGAGAACAAAATATACCATTG 57.683 33.333 0.00 0.00 42.91 2.82
2929 4847 9.535170 TTACATTTGGGAGAACAAAATATACCA 57.465 29.630 0.00 0.00 42.91 3.25
2937 4855 5.894393 TGAGGTTTACATTTGGGAGAACAAA 59.106 36.000 0.00 0.00 43.69 2.83
2938 4856 5.450453 TGAGGTTTACATTTGGGAGAACAA 58.550 37.500 0.00 0.00 0.00 2.83
2939 4857 5.055265 TGAGGTTTACATTTGGGAGAACA 57.945 39.130 0.00 0.00 0.00 3.18
2940 4858 6.590234 ATTGAGGTTTACATTTGGGAGAAC 57.410 37.500 0.00 0.00 0.00 3.01
2952 4871 7.277319 GCCACAGTAGTAGTTATTGAGGTTTAC 59.723 40.741 0.00 0.00 33.94 2.01
2967 4886 8.003044 AGTAACCTGATATTAGCCACAGTAGTA 58.997 37.037 0.00 0.00 0.00 1.82
2969 4888 7.014326 TCAGTAACCTGATATTAGCCACAGTAG 59.986 40.741 0.00 0.00 42.80 2.57
2970 4889 6.837048 TCAGTAACCTGATATTAGCCACAGTA 59.163 38.462 0.00 0.00 42.80 2.74
2972 4891 6.161855 TCAGTAACCTGATATTAGCCACAG 57.838 41.667 0.00 0.00 42.80 3.66
2973 4892 6.382859 TCTTCAGTAACCTGATATTAGCCACA 59.617 38.462 0.00 0.00 46.80 4.17
2975 4894 7.432148 TTCTTCAGTAACCTGATATTAGCCA 57.568 36.000 0.00 0.00 46.80 4.75
2976 4895 7.095017 GCATTCTTCAGTAACCTGATATTAGCC 60.095 40.741 0.00 0.00 46.80 3.93
2982 4908 5.528690 GCATGCATTCTTCAGTAACCTGATA 59.471 40.000 14.21 0.00 46.80 2.15
3018 4944 1.373748 CACCATGTTTGCAGGCTGC 60.374 57.895 31.91 31.91 45.29 5.25
3053 4979 9.326489 AGATATGTATACCTTATTCTTCTGCCA 57.674 33.333 0.00 0.00 0.00 4.92
3074 5000 9.499479 CCTTGACTTAAATATGCTGTGAGATAT 57.501 33.333 0.00 0.00 0.00 1.63
3076 5002 7.497249 GTCCTTGACTTAAATATGCTGTGAGAT 59.503 37.037 0.00 0.00 0.00 2.75
3084 5010 6.371548 TGTGACTGTCCTTGACTTAAATATGC 59.628 38.462 5.17 0.00 33.15 3.14
3096 5022 9.987272 TTATAATCATAGATGTGACTGTCCTTG 57.013 33.333 5.17 0.00 0.00 3.61
3141 5067 6.655003 AGTGAGAAATATGGTCGAAAACACAT 59.345 34.615 0.00 0.00 0.00 3.21
3142 5068 5.995282 AGTGAGAAATATGGTCGAAAACACA 59.005 36.000 0.00 0.00 0.00 3.72
3144 5070 9.529325 CTATAGTGAGAAATATGGTCGAAAACA 57.471 33.333 0.00 0.00 0.00 2.83
3192 5118 7.327214 GTTCAAAGATCTGAGAGGATACAGTT 58.673 38.462 0.00 0.00 41.41 3.16
3234 5160 8.075574 CACTATGTTTGTATTTGCAACAGAAGA 58.924 33.333 0.00 0.00 0.00 2.87
3237 5163 7.012799 TGTCACTATGTTTGTATTTGCAACAGA 59.987 33.333 0.00 0.00 0.00 3.41
3238 5164 7.138081 TGTCACTATGTTTGTATTTGCAACAG 58.862 34.615 0.00 0.00 0.00 3.16
3242 5168 7.020602 CGATTGTCACTATGTTTGTATTTGCA 58.979 34.615 0.00 0.00 0.00 4.08
3243 5169 7.021196 ACGATTGTCACTATGTTTGTATTTGC 58.979 34.615 0.00 0.00 0.00 3.68
3260 5186 9.855361 CTATGTTCATTTATCAAGACGATTGTC 57.145 33.333 4.78 4.78 45.86 3.18
3261 5187 9.383519 ACTATGTTCATTTATCAAGACGATTGT 57.616 29.630 0.00 0.00 35.39 2.71
3262 5188 9.855361 GACTATGTTCATTTATCAAGACGATTG 57.145 33.333 0.00 0.00 35.39 2.67
3263 5189 9.599866 TGACTATGTTCATTTATCAAGACGATT 57.400 29.630 0.00 0.00 35.39 3.34
3264 5190 9.035607 GTGACTATGTTCATTTATCAAGACGAT 57.964 33.333 0.00 0.00 38.21 3.73
3274 5200 7.284489 GCCCATTTAGGTGACTATGTTCATTTA 59.716 37.037 0.00 0.00 43.94 1.40
3280 5206 4.862641 AGCCCATTTAGGTGACTATGTT 57.137 40.909 0.00 0.00 43.94 2.71
3281 5207 5.968676 TTAGCCCATTTAGGTGACTATGT 57.031 39.130 0.00 0.00 43.94 2.29
3282 5208 7.285401 ACAAATTAGCCCATTTAGGTGACTATG 59.715 37.037 0.00 0.00 43.94 2.23
3283 5209 7.285401 CACAAATTAGCCCATTTAGGTGACTAT 59.715 37.037 0.00 0.00 43.94 2.12
3284 5210 6.601613 CACAAATTAGCCCATTTAGGTGACTA 59.398 38.462 0.00 0.00 43.67 2.59
3286 5212 5.650543 CACAAATTAGCCCATTTAGGTGAC 58.349 41.667 0.00 0.00 34.66 3.67
3287 5213 4.159506 GCACAAATTAGCCCATTTAGGTGA 59.840 41.667 10.54 0.00 34.66 4.02
3288 5214 4.160252 AGCACAAATTAGCCCATTTAGGTG 59.840 41.667 0.00 0.00 34.66 4.00
3339 5268 8.650143 AATGGAAATGGTAGTGTTTGATAGTT 57.350 30.769 0.00 0.00 0.00 2.24
3353 5282 4.467082 TGAAATGCAGCTAATGGAAATGGT 59.533 37.500 0.00 0.00 30.55 3.55
3354 5283 5.013568 TGAAATGCAGCTAATGGAAATGG 57.986 39.130 0.00 0.00 30.55 3.16
3364 5293 5.683681 TGAATACAGGATGAAATGCAGCTA 58.316 37.500 0.00 0.00 39.69 3.32
3366 5295 4.906065 TGAATACAGGATGAAATGCAGC 57.094 40.909 0.00 0.00 39.69 5.25
3367 5296 6.860080 ACTTTGAATACAGGATGAAATGCAG 58.140 36.000 0.00 0.00 39.69 4.41
3369 5298 7.315142 TGAACTTTGAATACAGGATGAAATGC 58.685 34.615 0.00 0.00 39.69 3.56
3372 5301 7.039853 TGCATGAACTTTGAATACAGGATGAAA 60.040 33.333 0.00 0.00 39.69 2.69
3373 5302 6.433716 TGCATGAACTTTGAATACAGGATGAA 59.566 34.615 0.00 0.00 39.69 2.57
3374 5303 5.945191 TGCATGAACTTTGAATACAGGATGA 59.055 36.000 0.00 0.00 39.69 2.92
3375 5304 6.127814 ACTGCATGAACTTTGAATACAGGATG 60.128 38.462 0.00 0.00 46.00 3.51
3376 5305 5.948162 ACTGCATGAACTTTGAATACAGGAT 59.052 36.000 0.00 0.00 0.00 3.24
3377 5306 5.316167 ACTGCATGAACTTTGAATACAGGA 58.684 37.500 0.00 0.00 0.00 3.86
3378 5307 5.633830 ACTGCATGAACTTTGAATACAGG 57.366 39.130 0.00 0.00 0.00 4.00
3379 5308 7.584108 TGTAACTGCATGAACTTTGAATACAG 58.416 34.615 0.00 0.00 0.00 2.74
3380 5309 7.503521 TGTAACTGCATGAACTTTGAATACA 57.496 32.000 0.00 0.00 0.00 2.29
3383 5312 8.742777 ACATATGTAACTGCATGAACTTTGAAT 58.257 29.630 6.56 0.00 0.00 2.57
3384 5313 8.022550 CACATATGTAACTGCATGAACTTTGAA 58.977 33.333 8.32 0.00 0.00 2.69
3385 5314 7.174772 ACACATATGTAACTGCATGAACTTTGA 59.825 33.333 8.32 0.00 37.26 2.69
3386 5315 7.271868 CACACATATGTAACTGCATGAACTTTG 59.728 37.037 8.32 0.00 36.72 2.77
3387 5316 7.307694 CACACATATGTAACTGCATGAACTTT 58.692 34.615 8.32 0.00 36.72 2.66
3388 5317 6.623549 GCACACATATGTAACTGCATGAACTT 60.624 38.462 19.91 0.00 36.72 2.66
3389 5318 5.163723 GCACACATATGTAACTGCATGAACT 60.164 40.000 19.91 0.00 36.72 3.01
3390 5319 5.030295 GCACACATATGTAACTGCATGAAC 58.970 41.667 19.91 0.00 36.72 3.18
3391 5320 4.699257 TGCACACATATGTAACTGCATGAA 59.301 37.500 22.13 7.86 36.72 2.57
3392 5321 4.260170 TGCACACATATGTAACTGCATGA 58.740 39.130 22.13 8.11 36.72 3.07
3393 5322 4.619437 TGCACACATATGTAACTGCATG 57.381 40.909 22.13 7.32 36.72 4.06
3394 5323 4.439153 GCTTGCACACATATGTAACTGCAT 60.439 41.667 24.64 0.00 36.72 3.96
3395 5324 3.119884 GCTTGCACACATATGTAACTGCA 60.120 43.478 22.13 22.13 36.72 4.41
3396 5325 3.119884 TGCTTGCACACATATGTAACTGC 60.120 43.478 18.77 18.77 36.72 4.40
3397 5326 4.683501 TGCTTGCACACATATGTAACTG 57.316 40.909 8.32 5.60 36.72 3.16
3398 5327 4.943093 TGATGCTTGCACACATATGTAACT 59.057 37.500 8.32 0.00 36.72 2.24
3399 5328 5.233957 TGATGCTTGCACACATATGTAAC 57.766 39.130 8.32 1.58 36.72 2.50
3400 5329 7.282901 AGTTATGATGCTTGCACACATATGTAA 59.717 33.333 8.32 0.00 36.72 2.41
3401 5330 6.767423 AGTTATGATGCTTGCACACATATGTA 59.233 34.615 8.32 0.00 36.72 2.29
3402 5331 5.591472 AGTTATGATGCTTGCACACATATGT 59.409 36.000 17.74 1.41 40.80 2.29
3403 5332 5.912955 CAGTTATGATGCTTGCACACATATG 59.087 40.000 17.74 0.00 0.00 1.78
3404 5333 5.009310 CCAGTTATGATGCTTGCACACATAT 59.991 40.000 17.74 7.80 0.00 1.78
3405 5334 4.336153 CCAGTTATGATGCTTGCACACATA 59.664 41.667 15.07 15.07 0.00 2.29
3406 5335 3.129813 CCAGTTATGATGCTTGCACACAT 59.870 43.478 16.48 16.48 0.00 3.21
3407 5336 2.488937 CCAGTTATGATGCTTGCACACA 59.511 45.455 0.00 2.26 0.00 3.72
3408 5337 2.749076 TCCAGTTATGATGCTTGCACAC 59.251 45.455 0.00 0.00 0.00 3.82
3409 5338 3.070476 TCCAGTTATGATGCTTGCACA 57.930 42.857 0.00 0.00 0.00 4.57
3410 5339 3.691118 TCTTCCAGTTATGATGCTTGCAC 59.309 43.478 0.00 0.00 0.00 4.57
3411 5340 3.954200 TCTTCCAGTTATGATGCTTGCA 58.046 40.909 0.00 0.00 0.00 4.08
3412 5341 4.577693 TCATCTTCCAGTTATGATGCTTGC 59.422 41.667 0.00 0.00 37.00 4.01
3413 5342 6.688637 TTCATCTTCCAGTTATGATGCTTG 57.311 37.500 0.00 0.00 37.00 4.01
3414 5343 7.014038 GGAATTCATCTTCCAGTTATGATGCTT 59.986 37.037 7.93 0.00 43.56 3.91
3415 5344 6.489361 GGAATTCATCTTCCAGTTATGATGCT 59.511 38.462 7.93 0.00 43.56 3.79
3416 5345 6.489361 AGGAATTCATCTTCCAGTTATGATGC 59.511 38.462 7.93 0.00 46.02 3.91
3417 5346 9.565090 TTAGGAATTCATCTTCCAGTTATGATG 57.435 33.333 7.93 0.00 46.02 3.07
3419 5348 9.973661 TTTTAGGAATTCATCTTCCAGTTATGA 57.026 29.630 7.93 0.00 46.02 2.15
3433 5362 9.751542 GAGTCGATCTTATCTTTTAGGAATTCA 57.248 33.333 7.93 0.00 0.00 2.57
3434 5363 9.751542 TGAGTCGATCTTATCTTTTAGGAATTC 57.248 33.333 0.00 0.00 0.00 2.17
3445 5374 9.751542 ACGAAAAATATTGAGTCGATCTTATCT 57.248 29.630 17.62 0.00 35.71 1.98
3449 5378 9.367444 AGTTACGAAAAATATTGAGTCGATCTT 57.633 29.630 17.62 0.00 35.71 2.40
3450 5379 8.808529 CAGTTACGAAAAATATTGAGTCGATCT 58.191 33.333 17.62 11.28 35.71 2.75
3451 5380 8.056571 CCAGTTACGAAAAATATTGAGTCGATC 58.943 37.037 17.62 9.89 35.71 3.69
3462 5391 7.814264 TGGGTTAAACCAGTTACGAAAAATA 57.186 32.000 8.58 0.00 41.02 1.40
3477 5406 6.715347 AGATTTGATATGGCTGGGTTAAAC 57.285 37.500 0.00 0.00 0.00 2.01
3478 5407 6.406849 GCAAGATTTGATATGGCTGGGTTAAA 60.407 38.462 0.00 0.00 0.00 1.52
3483 5412 3.228453 AGCAAGATTTGATATGGCTGGG 58.772 45.455 0.00 0.00 0.00 4.45
3484 5413 4.931661 AAGCAAGATTTGATATGGCTGG 57.068 40.909 0.00 0.00 0.00 4.85
3521 5450 7.011857 GCCAACAAAACCAATGAGTGAAAATAA 59.988 33.333 0.00 0.00 0.00 1.40
3524 5462 4.633565 GCCAACAAAACCAATGAGTGAAAA 59.366 37.500 0.00 0.00 0.00 2.29
3570 5508 1.167851 CACGACACCAAATCCATGCT 58.832 50.000 0.00 0.00 0.00 3.79
3750 5864 6.769822 AGGTGCCAACTTCTCATTCTATTATG 59.230 38.462 0.00 0.00 0.00 1.90
3766 5880 5.988561 TCAACATTTGAAAATAGGTGCCAAC 59.011 36.000 0.00 0.00 36.59 3.77
3769 5883 4.627035 GCTCAACATTTGAAAATAGGTGCC 59.373 41.667 0.00 0.00 39.58 5.01
3821 5935 2.114616 ACTGGGCTGAATAGAGTCTGG 58.885 52.381 1.86 0.00 0.00 3.86
3826 5940 1.065926 TGCACACTGGGCTGAATAGAG 60.066 52.381 4.56 0.00 0.00 2.43
3831 5945 2.284754 TTTATGCACACTGGGCTGAA 57.715 45.000 4.56 0.00 0.00 3.02
3848 5963 5.362430 TGTCTGTAGCCAGGACAAAAATTTT 59.638 36.000 0.00 0.00 39.31 1.82
3877 5992 4.660168 GGACATGGCATAAGAATCCAGAT 58.340 43.478 0.00 0.00 32.78 2.90
3883 5998 2.172505 TGGACGGACATGGCATAAGAAT 59.827 45.455 0.00 0.00 0.00 2.40
3888 6003 0.908910 AACTGGACGGACATGGCATA 59.091 50.000 0.00 0.00 0.00 3.14
3921 6036 8.810652 TTTGCCAGTTTCTTTATTGTGATTAC 57.189 30.769 0.00 0.00 0.00 1.89
3942 6057 1.229975 GGCCCAGCACATGTTTTTGC 61.230 55.000 0.00 0.00 39.16 3.68
3958 6073 2.722094 TCCATTAACATGTCTGTGGCC 58.278 47.619 15.01 0.00 35.22 5.36
3965 6080 6.339730 TGCCATCAAATTCCATTAACATGTC 58.660 36.000 0.00 0.00 0.00 3.06
4005 6120 4.274214 TCATCCGAATTTTATGCTCAGCTG 59.726 41.667 7.63 7.63 0.00 4.24
4023 6138 6.845302 TGCTTCAATATCGCAATAATCATCC 58.155 36.000 0.00 0.00 0.00 3.51
4060 6175 6.085555 ACACTTGACTTCAGAAACTATCGA 57.914 37.500 0.00 0.00 0.00 3.59
4061 6176 6.584954 CAACACTTGACTTCAGAAACTATCG 58.415 40.000 0.00 0.00 0.00 2.92
4086 6201 0.248458 AAACAGCGCAACGAAACCAG 60.248 50.000 11.47 0.00 0.00 4.00
4107 6222 3.222603 TCGGATCAAGCTATCTAGTGCA 58.777 45.455 0.00 0.00 0.00 4.57
4137 6252 2.553079 TTGTCCAAGCACGAACAAAC 57.447 45.000 0.00 0.00 0.00 2.93
4139 6254 5.391523 GCTATAATTGTCCAAGCACGAACAA 60.392 40.000 0.00 0.00 36.19 2.83
4143 6258 3.871006 CAGCTATAATTGTCCAAGCACGA 59.129 43.478 0.00 0.00 35.63 4.35
4145 6260 4.635765 TGTCAGCTATAATTGTCCAAGCAC 59.364 41.667 0.00 0.00 35.63 4.40
4220 6335 1.909700 TTGTGAATGTCTGCCCTTCC 58.090 50.000 0.00 0.00 0.00 3.46
4251 6366 4.706962 AGGAAAGTATTGGCAGAATGAACC 59.293 41.667 0.00 0.00 39.69 3.62
4258 6373 4.228210 AGGATTCAGGAAAGTATTGGCAGA 59.772 41.667 0.00 0.00 0.00 4.26
4269 6384 7.411808 ACTACTACTACTCAGGATTCAGGAAA 58.588 38.462 0.00 0.00 0.00 3.13
4273 6388 8.967664 AAGTACTACTACTACTCAGGATTCAG 57.032 38.462 0.00 0.00 32.46 3.02
4277 6392 9.835389 CAGTTAAGTACTACTACTACTCAGGAT 57.165 37.037 0.00 0.00 34.56 3.24
4278 6393 9.040259 TCAGTTAAGTACTACTACTACTCAGGA 57.960 37.037 0.00 0.00 34.56 3.86
4279 6394 9.664332 TTCAGTTAAGTACTACTACTACTCAGG 57.336 37.037 0.00 0.00 34.56 3.86
4293 6513 4.315803 TGCTTCAGCCTTCAGTTAAGTAC 58.684 43.478 0.00 0.00 41.18 2.73
4294 6514 4.569943 CTGCTTCAGCCTTCAGTTAAGTA 58.430 43.478 0.00 0.00 41.18 2.24
4295 6515 3.406764 CTGCTTCAGCCTTCAGTTAAGT 58.593 45.455 0.00 0.00 41.18 2.24
4339 6560 3.300667 GAGTTTGGCACAGCGAGCG 62.301 63.158 0.00 0.00 42.39 5.03
4340 6561 1.963338 AGAGTTTGGCACAGCGAGC 60.963 57.895 0.00 0.00 42.39 5.03
4341 6562 1.572085 CCAGAGTTTGGCACAGCGAG 61.572 60.000 0.00 0.00 42.39 5.03
4342 6563 1.597854 CCAGAGTTTGGCACAGCGA 60.598 57.895 0.00 0.00 42.39 4.93
4510 6738 1.432251 CTGGCTTGCATGCTAGCAC 59.568 57.895 40.82 32.20 45.61 4.40
4519 6747 2.042259 CCTTCATCGCTGGCTTGCA 61.042 57.895 4.24 0.00 0.00 4.08
4520 6748 2.796651 CCTTCATCGCTGGCTTGC 59.203 61.111 0.00 0.00 0.00 4.01
4521 6749 1.381928 ATGCCTTCATCGCTGGCTTG 61.382 55.000 0.00 0.00 46.23 4.01
4539 6767 0.535780 TACGCCGTCAGGATCCGTAT 60.536 55.000 5.98 0.00 41.02 3.06
4586 6815 6.494893 TGTTTCAGTGATGCTTTGGTATAC 57.505 37.500 0.00 0.00 0.00 1.47
4587 6816 5.123820 GCTGTTTCAGTGATGCTTTGGTATA 59.876 40.000 0.00 0.00 33.43 1.47
4589 6818 3.253188 GCTGTTTCAGTGATGCTTTGGTA 59.747 43.478 0.00 0.00 33.43 3.25
4590 6819 2.035066 GCTGTTTCAGTGATGCTTTGGT 59.965 45.455 0.00 0.00 33.43 3.67
4612 6841 2.033299 CGCTGCCAAAAATCATATCGGT 59.967 45.455 0.00 0.00 0.00 4.69
4613 6842 2.605338 CCGCTGCCAAAAATCATATCGG 60.605 50.000 0.00 0.00 0.00 4.18
4616 6845 1.755959 TGCCGCTGCCAAAAATCATAT 59.244 42.857 0.00 0.00 36.33 1.78
4617 6846 1.180907 TGCCGCTGCCAAAAATCATA 58.819 45.000 0.00 0.00 36.33 2.15
4662 6901 1.889829 CAAAACACCGGGGATGCTAAA 59.110 47.619 12.96 0.00 0.00 1.85
4663 6902 1.074084 TCAAAACACCGGGGATGCTAA 59.926 47.619 12.96 0.00 0.00 3.09
4664 6903 0.693622 TCAAAACACCGGGGATGCTA 59.306 50.000 12.96 0.00 0.00 3.49
4665 6904 0.039618 ATCAAAACACCGGGGATGCT 59.960 50.000 12.96 0.00 0.00 3.79
4666 6905 0.173255 CATCAAAACACCGGGGATGC 59.827 55.000 12.96 0.00 0.00 3.91
4667 6906 1.832883 TCATCAAAACACCGGGGATG 58.167 50.000 12.96 11.14 37.33 3.51
4683 6922 2.768344 ATCCTCGGCCCCGTTCAT 60.768 61.111 6.61 0.00 40.74 2.57
4696 6935 1.264749 TGTAAGGCCACGCAGATCCT 61.265 55.000 5.01 0.00 0.00 3.24
4697 6936 0.179045 ATGTAAGGCCACGCAGATCC 60.179 55.000 5.01 0.00 0.00 3.36
4698 6937 1.221414 GATGTAAGGCCACGCAGATC 58.779 55.000 5.01 0.00 0.00 2.75
4700 6939 1.153647 CGATGTAAGGCCACGCAGA 60.154 57.895 5.01 0.00 0.00 4.26
4701 6940 2.813179 GCGATGTAAGGCCACGCAG 61.813 63.158 5.01 0.00 46.75 5.18
4703 6942 3.925238 CGCGATGTAAGGCCACGC 61.925 66.667 5.01 11.13 44.64 5.34
4704 6943 3.261951 CCGCGATGTAAGGCCACG 61.262 66.667 8.23 1.68 0.00 4.94
4705 6944 2.171725 GTCCGCGATGTAAGGCCAC 61.172 63.158 8.23 0.00 0.00 5.01
4706 6945 1.895020 AAGTCCGCGATGTAAGGCCA 61.895 55.000 8.23 0.00 0.00 5.36
4707 6946 1.153429 AAGTCCGCGATGTAAGGCC 60.153 57.895 8.23 0.00 0.00 5.19
4709 6948 1.429148 GGCAAGTCCGCGATGTAAGG 61.429 60.000 8.23 0.00 0.00 2.69
4710 6949 2.006772 GGCAAGTCCGCGATGTAAG 58.993 57.895 8.23 0.00 0.00 2.34
4720 6959 3.670377 GCACCCAACGGCAAGTCC 61.670 66.667 0.00 0.00 0.00 3.85
4721 6960 2.904866 TGCACCCAACGGCAAGTC 60.905 61.111 0.00 0.00 37.03 3.01
4723 6962 2.906897 AGTGCACCCAACGGCAAG 60.907 61.111 14.63 0.00 42.45 4.01
4724 6963 3.215568 CAGTGCACCCAACGGCAA 61.216 61.111 14.63 0.00 42.45 4.52
4726 6965 3.835790 TACCAGTGCACCCAACGGC 62.836 63.158 14.63 0.00 0.00 5.68
4727 6966 0.608035 AATACCAGTGCACCCAACGG 60.608 55.000 14.63 9.16 0.00 4.44
4728 6967 1.199097 GAAATACCAGTGCACCCAACG 59.801 52.381 14.63 0.00 0.00 4.10
4729 6968 1.199097 CGAAATACCAGTGCACCCAAC 59.801 52.381 14.63 0.00 0.00 3.77
4730 6969 1.202830 ACGAAATACCAGTGCACCCAA 60.203 47.619 14.63 0.00 0.00 4.12
4731 6970 0.398696 ACGAAATACCAGTGCACCCA 59.601 50.000 14.63 0.00 0.00 4.51
4732 6971 1.084289 GACGAAATACCAGTGCACCC 58.916 55.000 14.63 0.00 0.00 4.61
4733 6972 0.719465 CGACGAAATACCAGTGCACC 59.281 55.000 14.63 0.00 0.00 5.01
4734 6973 0.719465 CCGACGAAATACCAGTGCAC 59.281 55.000 9.40 9.40 0.00 4.57
4736 6975 1.702491 GGCCGACGAAATACCAGTGC 61.702 60.000 0.00 0.00 0.00 4.40
4737 6976 0.108329 AGGCCGACGAAATACCAGTG 60.108 55.000 0.00 0.00 0.00 3.66
4738 6977 0.108329 CAGGCCGACGAAATACCAGT 60.108 55.000 0.00 0.00 0.00 4.00
4739 6978 0.810031 CCAGGCCGACGAAATACCAG 60.810 60.000 0.00 0.00 0.00 4.00
4742 6981 1.087771 CACCCAGGCCGACGAAATAC 61.088 60.000 0.00 0.00 0.00 1.89
4743 6982 1.219664 CACCCAGGCCGACGAAATA 59.780 57.895 0.00 0.00 0.00 1.40
4744 6983 2.046314 CACCCAGGCCGACGAAAT 60.046 61.111 0.00 0.00 0.00 2.17
4745 6984 4.323477 CCACCCAGGCCGACGAAA 62.323 66.667 0.00 0.00 0.00 3.46
4769 7008 3.106407 GTGGTCGTGCTCGTGCTC 61.106 66.667 11.19 6.24 40.48 4.26
4770 7009 4.664677 GGTGGTCGTGCTCGTGCT 62.665 66.667 11.19 0.00 40.48 4.40
4782 7021 3.839046 TAGGTGGACTGGCGGTGGT 62.839 63.158 2.25 0.00 0.00 4.16
4783 7022 3.000819 TAGGTGGACTGGCGGTGG 61.001 66.667 2.25 0.00 0.00 4.61
4784 7023 2.264794 GTAGGTGGACTGGCGGTG 59.735 66.667 2.25 0.00 0.00 4.94
4785 7024 2.203728 TGTAGGTGGACTGGCGGT 60.204 61.111 0.00 0.00 0.00 5.68
4786 7025 2.107041 TTGTGTAGGTGGACTGGCGG 62.107 60.000 0.00 0.00 0.00 6.13
4788 7027 0.396811 AGTTGTGTAGGTGGACTGGC 59.603 55.000 0.00 0.00 0.00 4.85
4789 7028 1.971357 AGAGTTGTGTAGGTGGACTGG 59.029 52.381 0.00 0.00 0.00 4.00
4790 7029 3.753294 AAGAGTTGTGTAGGTGGACTG 57.247 47.619 0.00 0.00 0.00 3.51
4791 7030 3.967987 AGAAAGAGTTGTGTAGGTGGACT 59.032 43.478 0.00 0.00 0.00 3.85
4793 7032 4.407621 TGAAGAAAGAGTTGTGTAGGTGGA 59.592 41.667 0.00 0.00 0.00 4.02
4795 7034 5.584649 TGTTGAAGAAAGAGTTGTGTAGGTG 59.415 40.000 0.00 0.00 0.00 4.00
4796 7035 5.741011 TGTTGAAGAAAGAGTTGTGTAGGT 58.259 37.500 0.00 0.00 0.00 3.08
4798 7037 9.573133 AAAATTGTTGAAGAAAGAGTTGTGTAG 57.427 29.630 0.00 0.00 0.00 2.74
4831 7070 0.168128 GCGTCGGCACAGCTATTTTT 59.832 50.000 0.00 0.00 39.62 1.94
4832 7071 1.794222 GCGTCGGCACAGCTATTTT 59.206 52.632 0.00 0.00 39.62 1.82
4833 7072 2.452813 CGCGTCGGCACAGCTATTT 61.453 57.895 0.00 0.00 39.92 1.40
4834 7073 2.885644 CGCGTCGGCACAGCTATT 60.886 61.111 0.00 0.00 39.92 1.73
4835 7074 4.129737 ACGCGTCGGCACAGCTAT 62.130 61.111 5.58 0.00 39.92 2.97
4836 7075 4.771356 GACGCGTCGGCACAGCTA 62.771 66.667 25.19 0.00 39.92 3.32
4851 7119 4.324991 AAAGGTCCACGGCCCGAC 62.325 66.667 11.71 0.00 0.00 4.79
4852 7120 4.323477 CAAAGGTCCACGGCCCGA 62.323 66.667 11.71 0.00 0.00 5.14
4858 7126 4.025401 GGCACGCAAAGGTCCACG 62.025 66.667 0.00 0.00 0.00 4.94
4859 7127 3.670377 GGGCACGCAAAGGTCCAC 61.670 66.667 0.00 0.00 0.00 4.02
4860 7128 2.130821 TATGGGCACGCAAAGGTCCA 62.131 55.000 0.00 0.00 0.00 4.02
4862 7130 1.993369 GCTATGGGCACGCAAAGGTC 61.993 60.000 0.00 0.00 41.35 3.85
4864 7132 1.750399 AGCTATGGGCACGCAAAGG 60.750 57.895 0.00 0.00 44.79 3.11
4867 7135 1.450134 CTCAGCTATGGGCACGCAA 60.450 57.895 0.00 0.00 44.79 4.85
4874 7142 2.449322 AGGGGGCTCAGCTATGGG 60.449 66.667 0.00 0.00 0.00 4.00
4901 7181 3.031013 CTCCCACCCAACTTTTTGTTCT 58.969 45.455 0.00 0.00 36.63 3.01
4923 7203 3.777925 CAGCTTCCAACGCGACGG 61.778 66.667 15.93 13.24 0.00 4.79
4924 7204 3.777925 CCAGCTTCCAACGCGACG 61.778 66.667 15.93 2.08 0.00 5.12
4942 7222 3.248446 TACCAGGAACCAGTGGCGC 62.248 63.158 9.78 0.00 37.34 6.53
4943 7223 1.079127 CTACCAGGAACCAGTGGCG 60.079 63.158 9.78 0.00 37.34 5.69
4944 7224 0.321653 CACTACCAGGAACCAGTGGC 60.322 60.000 9.78 0.00 37.34 5.01
4945 7225 3.935993 CACTACCAGGAACCAGTGG 57.064 57.895 7.91 7.91 39.98 4.00
4946 7226 1.056660 ACCACTACCAGGAACCAGTG 58.943 55.000 0.00 0.93 38.48 3.66
4947 7227 1.815757 AACCACTACCAGGAACCAGT 58.184 50.000 0.00 0.00 0.00 4.00
4954 7234 0.320073 TCGCGAAAACCACTACCAGG 60.320 55.000 6.20 0.00 0.00 4.45
5099 7379 2.709125 TTAAGCTATGGCGCGGCGAT 62.709 55.000 28.54 22.44 44.37 4.58
5183 7475 3.181442 TGGTTATCCGACAGGTTTTTCCA 60.181 43.478 0.00 0.00 39.05 3.53
5199 7491 7.030165 CGAGAAGAATATATCTGCGTGGTTAT 58.970 38.462 0.00 0.00 38.93 1.89
5231 7559 2.947109 GCGTGCGTGCGTGTTTTT 60.947 55.556 3.11 0.00 0.00 1.94
5252 7589 2.577449 TGCAGATTCGCTCGAATACA 57.423 45.000 16.27 12.32 43.98 2.29
5321 7673 2.910479 TCCGTGTCCTGTCGTGCT 60.910 61.111 0.00 0.00 0.00 4.40
5346 7701 2.369477 GAAACAAGGTGCGTCGCGTT 62.369 55.000 13.38 7.17 0.00 4.84
5492 7875 1.677052 GCCCGGCGGAATAAATTAACA 59.323 47.619 30.79 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.