Multiple sequence alignment - TraesCS2D01G425100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G425100 chr2D 100.000 7966 0 0 1 7966 537500175 537508140 0.000000e+00 14711.0
1 TraesCS2D01G425100 chr2D 100.000 386 0 0 8293 8678 537508467 537508852 0.000000e+00 713.0
2 TraesCS2D01G425100 chr2D 87.288 354 30 8 8334 8678 423608552 423608899 2.940000e-104 390.0
3 TraesCS2D01G425100 chr2D 85.673 349 41 7 8334 8678 50116106 50116449 8.280000e-95 359.0
4 TraesCS2D01G425100 chr2D 92.157 51 2 2 4376 4424 268894282 268894332 4.350000e-08 71.3
5 TraesCS2D01G425100 chr2B 97.495 3912 57 14 2141 6024 640335703 640339601 0.000000e+00 6643.0
6 TraesCS2D01G425100 chr2B 94.050 1563 55 7 6054 7600 640339822 640341362 0.000000e+00 2337.0
7 TraesCS2D01G425100 chr2B 93.484 1243 56 9 942 2177 640334477 640335701 0.000000e+00 1823.0
8 TraesCS2D01G425100 chr2B 88.747 942 57 15 1 908 640333096 640334022 0.000000e+00 1107.0
9 TraesCS2D01G425100 chr2B 86.147 231 25 4 8448 8677 548931746 548931970 8.700000e-60 243.0
10 TraesCS2D01G425100 chr2B 88.235 85 7 1 2431 2515 640335923 640336004 1.990000e-16 99.0
11 TraesCS2D01G425100 chr2B 94.915 59 3 0 4421 4479 645657249 645657191 9.280000e-15 93.5
12 TraesCS2D01G425100 chr2B 96.154 52 2 0 7765 7816 640341419 640341470 1.550000e-12 86.1
13 TraesCS2D01G425100 chr2B 89.831 59 6 0 639 697 636484419 636484361 9.340000e-10 76.8
14 TraesCS2D01G425100 chr2B 92.157 51 2 2 4376 4424 308719676 308719726 4.350000e-08 71.3
15 TraesCS2D01G425100 chr2A 94.894 3623 124 33 833 4424 680077143 680080735 0.000000e+00 5609.0
16 TraesCS2D01G425100 chr2A 96.040 1793 40 5 6054 7817 680082488 680084278 0.000000e+00 2889.0
17 TraesCS2D01G425100 chr2A 98.341 1567 23 2 4421 5984 680080799 680082365 0.000000e+00 2747.0
18 TraesCS2D01G425100 chr2A 79.630 324 41 13 8375 8678 104388527 104388845 8.830000e-50 209.0
19 TraesCS2D01G425100 chr7D 84.233 945 113 24 1308 2232 182511976 182512904 0.000000e+00 887.0
20 TraesCS2D01G425100 chr7D 82.911 316 26 17 1091 1401 606445222 606445514 8.640000e-65 259.0
21 TraesCS2D01G425100 chr7B 83.844 947 113 26 1308 2232 150928742 150929670 0.000000e+00 865.0
22 TraesCS2D01G425100 chr7B 83.403 952 124 21 1308 2241 439679764 439678829 0.000000e+00 852.0
23 TraesCS2D01G425100 chr1A 87.365 554 52 10 1703 2241 504260827 504260277 3.440000e-173 619.0
24 TraesCS2D01G425100 chr1A 87.091 550 53 9 1703 2241 534953168 534952626 2.680000e-169 606.0
25 TraesCS2D01G425100 chr1A 79.615 520 49 20 1179 1673 534954692 534954205 3.910000e-83 320.0
26 TraesCS2D01G425100 chr1A 79.423 520 50 20 1179 1673 504262350 504261863 1.820000e-81 315.0
27 TraesCS2D01G425100 chr1A 97.727 44 0 1 4381 4424 202099443 202099401 3.360000e-09 75.0
28 TraesCS2D01G425100 chr3A 87.161 553 57 8 1700 2241 503847135 503847684 4.450000e-172 616.0
29 TraesCS2D01G425100 chr3A 80.000 520 47 21 1179 1673 503845614 503846101 1.810000e-86 331.0
30 TraesCS2D01G425100 chr3A 82.899 345 41 12 1308 1652 728414646 728414320 2.370000e-75 294.0
31 TraesCS2D01G425100 chr3A 88.889 153 9 5 1091 1239 279434412 279434264 1.920000e-41 182.0
32 TraesCS2D01G425100 chr3A 95.833 48 0 2 4379 4424 256240012 256240059 9.340000e-10 76.8
33 TraesCS2D01G425100 chr3A 92.000 50 4 0 4375 4424 291804382 291804431 4.350000e-08 71.3
34 TraesCS2D01G425100 chr6D 87.109 543 58 5 1700 2241 454447255 454447786 9.640000e-169 604.0
35 TraesCS2D01G425100 chr6D 90.448 335 24 6 8336 8666 17117141 17116811 1.340000e-117 435.0
36 TraesCS2D01G425100 chr6D 85.441 261 32 1 5052 5312 58460485 58460231 5.160000e-67 267.0
37 TraesCS2D01G425100 chr3D 82.517 715 86 23 1308 1998 598301349 598300650 7.500000e-165 592.0
38 TraesCS2D01G425100 chr3D 85.567 388 33 12 8293 8678 533719679 533720045 1.370000e-102 385.0
39 TraesCS2D01G425100 chr3D 84.638 345 45 6 8334 8675 566627756 566627417 3.880000e-88 337.0
40 TraesCS2D01G425100 chr3D 83.861 316 23 17 1091 1401 350129239 350129531 8.580000e-70 276.0
41 TraesCS2D01G425100 chr3D 88.500 200 20 2 2043 2241 598300639 598300442 1.130000e-58 239.0
42 TraesCS2D01G425100 chr1D 88.796 357 25 7 8334 8678 36560598 36560245 2.900000e-114 424.0
43 TraesCS2D01G425100 chr1D 86.994 346 31 10 8334 8678 401019112 401018780 2.290000e-100 377.0
44 TraesCS2D01G425100 chr1B 85.632 348 27 14 8293 8622 30784329 30783987 2.320000e-90 344.0
45 TraesCS2D01G425100 chr7A 82.621 351 42 12 8335 8671 428404194 428403849 8.520000e-75 292.0
46 TraesCS2D01G425100 chr6B 82.334 317 43 5 5053 5368 131930725 131930421 6.680000e-66 263.0
47 TraesCS2D01G425100 chr6A 79.693 261 34 8 5052 5312 73681009 73680768 4.170000e-38 171.0
48 TraesCS2D01G425100 chr5B 89.256 121 13 0 1317 1437 356196472 356196592 1.510000e-32 152.0
49 TraesCS2D01G425100 chr3B 95.833 48 0 2 4379 4424 352239651 352239698 9.340000e-10 76.8
50 TraesCS2D01G425100 chr5A 93.878 49 2 1 4376 4424 363848603 363848650 1.210000e-08 73.1
51 TraesCS2D01G425100 chrUn 100.000 29 0 0 7676 7704 313255228 313255256 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G425100 chr2D 537500175 537508852 8677 False 7712.000000 14711 100.0000 1 8678 2 chr2D.!!$F4 8677
1 TraesCS2D01G425100 chr2B 640333096 640341470 8374 False 2015.850000 6643 93.0275 1 7816 6 chr2B.!!$F3 7815
2 TraesCS2D01G425100 chr2A 680077143 680084278 7135 False 3748.333333 5609 96.4250 833 7817 3 chr2A.!!$F2 6984
3 TraesCS2D01G425100 chr7D 182511976 182512904 928 False 887.000000 887 84.2330 1308 2232 1 chr7D.!!$F1 924
4 TraesCS2D01G425100 chr7B 150928742 150929670 928 False 865.000000 865 83.8440 1308 2232 1 chr7B.!!$F1 924
5 TraesCS2D01G425100 chr7B 439678829 439679764 935 True 852.000000 852 83.4030 1308 2241 1 chr7B.!!$R1 933
6 TraesCS2D01G425100 chr1A 504260277 504262350 2073 True 467.000000 619 83.3940 1179 2241 2 chr1A.!!$R2 1062
7 TraesCS2D01G425100 chr1A 534952626 534954692 2066 True 463.000000 606 83.3530 1179 2241 2 chr1A.!!$R3 1062
8 TraesCS2D01G425100 chr3A 503845614 503847684 2070 False 473.500000 616 83.5805 1179 2241 2 chr3A.!!$F3 1062
9 TraesCS2D01G425100 chr6D 454447255 454447786 531 False 604.000000 604 87.1090 1700 2241 1 chr6D.!!$F1 541
10 TraesCS2D01G425100 chr3D 598300442 598301349 907 True 415.500000 592 85.5085 1308 2241 2 chr3D.!!$R2 933

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
577 587 0.251916 TTCCCATGCTAACCTGGTCG 59.748 55.000 0.00 0.00 0.00 4.79 F
1584 2122 1.060937 GCGCGTGGAATGATGTCAC 59.939 57.895 8.43 0.00 0.00 3.67 F
2094 3662 0.832135 AACCTCTTCCAGCTCCGTGA 60.832 55.000 0.00 0.00 0.00 4.35 F
2688 4308 1.305213 AAGCAACCGCATTGGGGAT 60.305 52.632 25.08 11.68 44.64 3.85 F
2795 4415 2.746904 CAATTTATCAGGTCGGTGTGCA 59.253 45.455 0.00 0.00 0.00 4.57 F
3803 5426 5.155278 TGCGGACTATTTTCTCCACTAAA 57.845 39.130 0.00 0.00 0.00 1.85 F
4916 6609 3.882888 TCCTCATTGCAAACGAAAAGACT 59.117 39.130 1.71 0.00 0.00 3.24 F
6037 7730 2.675658 TGCTATGCCTTTAATCCCCC 57.324 50.000 0.00 0.00 0.00 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1981 3545 1.005294 GGCAAACATTGTCAGCAGCG 61.005 55.000 13.32 0.0 34.79 5.18 R
2685 4305 1.334869 CGAAAATGCCCTGCACTATCC 59.665 52.381 0.00 0.0 43.04 2.59 R
2946 4566 2.544685 CATAGACGCTCTCCACAAAGG 58.455 52.381 0.00 0.0 39.47 3.11 R
4338 5961 1.247567 AGTTAAAGCGCACCAGCAAT 58.752 45.000 11.47 0.0 42.27 3.56 R
4498 6188 1.953559 TCTGAACCAACAGACTGCAC 58.046 50.000 1.25 0.0 41.21 4.57 R
5044 6737 5.839621 ACAGTGTAACAAGTCAGTAATCGT 58.160 37.500 0.00 0.0 41.43 3.73 R
6459 8344 1.323412 TGGTGGCGCAACAAACTATT 58.677 45.000 18.47 0.0 0.00 1.73 R
7871 9785 0.030235 GGAAAAACTCCACACGCCAC 59.970 55.000 0.00 0.0 44.67 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 5.843673 TTGTTAGAACAAGCATTTGACCA 57.156 34.783 3.71 0.00 43.45 4.02
33 34 6.403866 TTGTTAGAACAAGCATTTGACCAT 57.596 33.333 3.71 0.00 43.45 3.55
103 104 4.952957 TGAATCCGGATTCCAAATTGCTTA 59.047 37.500 40.76 23.22 44.93 3.09
106 107 4.792068 TCCGGATTCCAAATTGCTTATCT 58.208 39.130 0.00 0.00 0.00 1.98
107 108 4.580167 TCCGGATTCCAAATTGCTTATCTG 59.420 41.667 0.00 0.00 0.00 2.90
190 191 7.885922 TGTCCCAACTAAAGCTAATATGTGAAA 59.114 33.333 0.00 0.00 0.00 2.69
218 219 6.786967 ATTTTGAAATGGATCCTCAGAAGG 57.213 37.500 14.23 0.00 44.89 3.46
235 236 4.761739 CAGAAGGAGAGGTAATTGCACAAA 59.238 41.667 0.00 0.00 0.00 2.83
237 238 5.649831 AGAAGGAGAGGTAATTGCACAAATC 59.350 40.000 0.00 0.00 0.00 2.17
238 239 4.922206 AGGAGAGGTAATTGCACAAATCA 58.078 39.130 0.00 0.00 0.00 2.57
288 298 6.010219 AGAACCTATTGTATTGGTTTGCTGT 58.990 36.000 6.91 0.00 45.99 4.40
320 330 6.064846 CCAGATATTGGTGTTATCTGTTGC 57.935 41.667 15.71 0.00 46.09 4.17
349 359 6.426646 AGTCTAATCCAGCATTTAGGTAGG 57.573 41.667 0.00 0.00 0.00 3.18
351 361 6.387220 AGTCTAATCCAGCATTTAGGTAGGTT 59.613 38.462 0.00 0.00 0.00 3.50
387 397 5.013079 TGACAAGTGGATCTCATTGGTAAGT 59.987 40.000 0.00 0.00 0.00 2.24
388 398 5.248640 ACAAGTGGATCTCATTGGTAAGTG 58.751 41.667 0.00 0.00 0.00 3.16
389 399 3.878778 AGTGGATCTCATTGGTAAGTGC 58.121 45.455 0.00 0.00 0.00 4.40
390 400 3.264193 AGTGGATCTCATTGGTAAGTGCA 59.736 43.478 0.00 0.00 0.00 4.57
464 474 4.343814 ACCTTTTGTCCAATTCCGTTGAAT 59.656 37.500 0.00 0.00 43.08 2.57
553 563 7.175990 TGTTAAATTAGAAAAACCGAGCCATCT 59.824 33.333 0.00 0.00 0.00 2.90
566 576 2.555757 GAGCCATCTAACATTCCCATGC 59.444 50.000 0.00 0.00 33.05 4.06
577 587 0.251916 TTCCCATGCTAACCTGGTCG 59.748 55.000 0.00 0.00 0.00 4.79
597 607 4.069304 TCGATTGATGGTCGGTTTTCTTT 58.931 39.130 0.00 0.00 39.45 2.52
598 608 4.517453 TCGATTGATGGTCGGTTTTCTTTT 59.483 37.500 0.00 0.00 39.45 2.27
602 612 5.782893 TGATGGTCGGTTTTCTTTTTCAT 57.217 34.783 0.00 0.00 0.00 2.57
605 615 3.131223 TGGTCGGTTTTCTTTTTCATGCA 59.869 39.130 0.00 0.00 0.00 3.96
610 620 4.152759 CGGTTTTCTTTTTCATGCATGCAT 59.847 37.500 27.46 27.46 37.08 3.96
614 624 8.238631 GGTTTTCTTTTTCATGCATGCATTTAT 58.761 29.630 30.32 8.24 33.90 1.40
622 632 2.580962 TGCATGCATTTATAAGCGGGA 58.419 42.857 18.46 0.00 0.00 5.14
659 689 2.159099 TGGATTAGACCTAGCTGCAACG 60.159 50.000 1.02 0.00 0.00 4.10
670 700 1.094785 GCTGCAACGGATTACACCAT 58.905 50.000 0.00 0.00 0.00 3.55
672 702 2.680841 GCTGCAACGGATTACACCATTA 59.319 45.455 0.00 0.00 0.00 1.90
675 705 5.560183 GCTGCAACGGATTACACCATTATAC 60.560 44.000 0.00 0.00 0.00 1.47
677 707 4.746115 GCAACGGATTACACCATTATACGA 59.254 41.667 0.00 0.00 30.35 3.43
678 708 5.407387 GCAACGGATTACACCATTATACGAT 59.593 40.000 0.00 0.00 30.35 3.73
699 729 7.708998 ACGATGTTTTGTACAACAAACCTATT 58.291 30.769 16.72 3.85 46.53 1.73
702 732 9.308318 GATGTTTTGTACAACAAACCTATTGTT 57.692 29.630 16.72 0.94 46.53 2.83
703 733 8.690680 TGTTTTGTACAACAAACCTATTGTTC 57.309 30.769 16.72 0.00 46.53 3.18
704 734 8.524487 TGTTTTGTACAACAAACCTATTGTTCT 58.476 29.630 16.72 0.00 46.53 3.01
705 735 8.803799 GTTTTGTACAACAAACCTATTGTTCTG 58.196 33.333 8.07 0.00 46.53 3.02
706 736 7.633193 TTGTACAACAAACCTATTGTTCTGT 57.367 32.000 3.59 4.23 40.30 3.41
707 737 7.022055 TGTACAACAAACCTATTGTTCTGTG 57.978 36.000 3.72 0.00 40.30 3.66
708 738 6.600032 TGTACAACAAACCTATTGTTCTGTGT 59.400 34.615 3.72 3.30 40.30 3.72
712 742 8.691797 ACAACAAACCTATTGTTCTGTGTAAAT 58.308 29.630 3.72 0.00 40.30 1.40
725 755 8.100164 TGTTCTGTGTAAATCATCACCAATAGA 58.900 33.333 0.00 0.00 34.14 1.98
729 759 9.770097 CTGTGTAAATCATCACCAATAGATAGT 57.230 33.333 0.00 0.00 34.14 2.12
774 804 8.949177 TCGGAAAGAATTTAGTTTATGTAACCC 58.051 33.333 0.00 0.00 39.27 4.11
784 814 4.043561 AGTTTATGTAACCCATGTGTCCCA 59.956 41.667 0.00 0.00 37.46 4.37
815 845 4.398044 CCCTAAATGCGGTACACTTTCAAT 59.602 41.667 0.00 0.00 0.00 2.57
816 846 5.587043 CCCTAAATGCGGTACACTTTCAATA 59.413 40.000 0.00 0.00 0.00 1.90
817 847 6.094325 CCCTAAATGCGGTACACTTTCAATAA 59.906 38.462 0.00 0.00 0.00 1.40
878 916 3.004171 TCGACGAAAAGAGAGAGAGAGG 58.996 50.000 0.00 0.00 0.00 3.69
880 918 3.349022 GACGAAAAGAGAGAGAGAGGGA 58.651 50.000 0.00 0.00 0.00 4.20
1043 1502 4.815108 GCCCCGAACATCCCACCC 62.815 72.222 0.00 0.00 0.00 4.61
1504 2041 1.901464 TTCGCCCTGCCTGTTTTCC 60.901 57.895 0.00 0.00 0.00 3.13
1507 2044 2.854076 CCCTGCCTGTTTTCCCCT 59.146 61.111 0.00 0.00 0.00 4.79
1508 2045 1.304464 CCCTGCCTGTTTTCCCCTC 60.304 63.158 0.00 0.00 0.00 4.30
1511 2048 2.361230 GCCTGTTTTCCCCTCCCG 60.361 66.667 0.00 0.00 0.00 5.14
1522 2060 4.778143 CCTCCCGGCGTCCTTTGG 62.778 72.222 6.01 0.00 0.00 3.28
1584 2122 1.060937 GCGCGTGGAATGATGTCAC 59.939 57.895 8.43 0.00 0.00 3.67
1720 3270 5.791367 ATGTGTTCGATCAGAAACATCAG 57.209 39.130 8.13 0.00 41.10 2.90
1981 3545 7.275999 GTGAACCAGTAAACTGCTACTAATCTC 59.724 40.741 4.53 0.00 42.47 2.75
1986 3550 2.500509 ACTGCTACTAATCTCGCTGC 57.499 50.000 0.00 0.00 0.00 5.25
1987 3551 2.028130 ACTGCTACTAATCTCGCTGCT 58.972 47.619 0.00 0.00 0.00 4.24
2094 3662 0.832135 AACCTCTTCCAGCTCCGTGA 60.832 55.000 0.00 0.00 0.00 4.35
2192 3760 3.775316 CCTCTTTCTAGGTGGCCTAAGAA 59.225 47.826 3.32 4.94 35.49 2.52
2389 4008 7.803659 CGTTTTCTCCCTTTCAAATTAGAGAAC 59.196 37.037 6.27 0.00 39.40 3.01
2685 4305 1.814772 TTCCAAGCAACCGCATTGGG 61.815 55.000 12.54 0.00 42.21 4.12
2688 4308 1.305213 AAGCAACCGCATTGGGGAT 60.305 52.632 25.08 11.68 44.64 3.85
2795 4415 2.746904 CAATTTATCAGGTCGGTGTGCA 59.253 45.455 0.00 0.00 0.00 4.57
2946 4566 8.976986 AGTTGAAAATTTCATCAGCAGAATAC 57.023 30.769 16.29 5.86 39.84 1.89
3437 5060 5.880332 TCAGTTATTTTATGACTCCACAGGC 59.120 40.000 0.00 0.00 0.00 4.85
3803 5426 5.155278 TGCGGACTATTTTCTCCACTAAA 57.845 39.130 0.00 0.00 0.00 1.85
3804 5427 5.741011 TGCGGACTATTTTCTCCACTAAAT 58.259 37.500 0.00 0.00 0.00 1.40
4008 5631 6.256104 TGATTTCAATTGCACTTCTTGTTGTG 59.744 34.615 0.00 0.00 37.26 3.33
4338 5961 6.438259 TTCTTTTGATTTCCGTTGTGTACA 57.562 33.333 0.00 0.00 0.00 2.90
4498 6188 7.664082 ATTTAGATTGTCTGTTGTCTCACAG 57.336 36.000 0.00 0.00 44.96 3.66
4739 6432 6.793492 AACTCTTAGTCATTCAAACTCAGC 57.207 37.500 0.00 0.00 0.00 4.26
4788 6481 6.806751 TCTGCTTAATGTATCCACTACTCAC 58.193 40.000 0.00 0.00 0.00 3.51
4916 6609 3.882888 TCCTCATTGCAAACGAAAAGACT 59.117 39.130 1.71 0.00 0.00 3.24
5322 7015 2.768253 TCCGAAGCACATCTGATGTT 57.232 45.000 20.13 6.86 42.70 2.71
5990 7683 6.491383 TGTACATGGACTCTAGTTTAGGTCT 58.509 40.000 10.05 0.00 0.00 3.85
6005 7698 7.501844 AGTTTAGGTCTATCTGAATTACAGGC 58.498 38.462 0.00 0.00 45.76 4.85
6024 7717 5.314923 AGGCACTGTTGTTTATTGCTATG 57.685 39.130 0.00 0.00 37.18 2.23
6025 7718 3.859386 GGCACTGTTGTTTATTGCTATGC 59.141 43.478 0.00 0.00 33.55 3.14
6026 7719 3.859386 GCACTGTTGTTTATTGCTATGCC 59.141 43.478 0.00 0.00 0.00 4.40
6027 7720 4.380867 GCACTGTTGTTTATTGCTATGCCT 60.381 41.667 0.00 0.00 0.00 4.75
6028 7721 5.713025 CACTGTTGTTTATTGCTATGCCTT 58.287 37.500 0.00 0.00 0.00 4.35
6029 7722 6.158598 CACTGTTGTTTATTGCTATGCCTTT 58.841 36.000 0.00 0.00 0.00 3.11
6030 7723 7.312154 CACTGTTGTTTATTGCTATGCCTTTA 58.688 34.615 0.00 0.00 0.00 1.85
6031 7724 7.812191 CACTGTTGTTTATTGCTATGCCTTTAA 59.188 33.333 0.00 0.00 0.00 1.52
6032 7725 8.531146 ACTGTTGTTTATTGCTATGCCTTTAAT 58.469 29.630 0.00 0.00 0.00 1.40
6033 7726 8.925161 TGTTGTTTATTGCTATGCCTTTAATC 57.075 30.769 0.00 0.00 0.00 1.75
6034 7727 7.978975 TGTTGTTTATTGCTATGCCTTTAATCC 59.021 33.333 0.00 0.00 0.00 3.01
6035 7728 7.049799 TGTTTATTGCTATGCCTTTAATCCC 57.950 36.000 0.00 0.00 0.00 3.85
6036 7729 6.041523 TGTTTATTGCTATGCCTTTAATCCCC 59.958 38.462 0.00 0.00 0.00 4.81
6037 7730 2.675658 TGCTATGCCTTTAATCCCCC 57.324 50.000 0.00 0.00 0.00 5.40
6104 7988 5.840243 ATGAATGCGATTTTCTCCATTCA 57.160 34.783 14.76 14.76 45.33 2.57
6428 8313 4.666928 TTACAAATTTCGGTAGAACGCC 57.333 40.909 0.00 0.00 35.86 5.68
6431 8316 3.058501 ACAAATTTCGGTAGAACGCCAAG 60.059 43.478 0.00 0.00 35.86 3.61
6471 8356 8.895932 AATGAATTAGTCGAATAGTTTGTTGC 57.104 30.769 2.12 0.00 0.00 4.17
6592 8477 4.202398 TGTTGGTGAGATTCTGAGAGCTTT 60.202 41.667 0.00 0.00 0.00 3.51
6601 8486 3.951775 TCTGAGAGCTTTCTTCAGTCC 57.048 47.619 5.77 0.00 0.00 3.85
6943 8828 2.369203 TCCCTCGTTGGATTACACACAA 59.631 45.455 0.00 0.00 38.35 3.33
7327 9212 2.237143 CAGAAGGTGATGGCTAGGACAA 59.763 50.000 0.00 0.00 0.00 3.18
7451 9351 1.295792 TTGTTGTGTGCTCCTTCGAC 58.704 50.000 0.00 0.00 0.00 4.20
7605 9505 6.603201 CCTTTTCTTATCTGCACTTATTGGGA 59.397 38.462 0.00 0.00 0.00 4.37
7606 9506 7.391148 TTTTCTTATCTGCACTTATTGGGAC 57.609 36.000 0.00 0.00 0.00 4.46
7612 9512 6.759497 ATCTGCACTTATTGGGACTTTTAC 57.241 37.500 0.00 0.00 0.00 2.01
7648 9548 1.304879 TGTACCCAAATGCAGCCCC 60.305 57.895 0.00 0.00 0.00 5.80
7685 9585 7.191593 TGAATTTTACTACTTACTCCCTCCC 57.808 40.000 0.00 0.00 0.00 4.30
7701 9601 6.104691 ACTCCCTCCCATCCATATTAATTGTT 59.895 38.462 0.00 0.00 0.00 2.83
7702 9602 6.314120 TCCCTCCCATCCATATTAATTGTTG 58.686 40.000 0.00 0.00 0.00 3.33
7703 9603 5.047092 CCCTCCCATCCATATTAATTGTTGC 60.047 44.000 0.00 0.00 0.00 4.17
7710 9610 7.650504 CCATCCATATTAATTGTTGCAGACTTG 59.349 37.037 0.00 0.00 0.00 3.16
7729 9629 3.357166 TGGCACAATTTCGTTACAACC 57.643 42.857 0.00 0.00 31.92 3.77
7742 9642 7.656707 TTCGTTACAACCTTGTACTAAATCC 57.343 36.000 0.00 0.00 42.84 3.01
7761 9661 3.275143 TCCGCGACAATTAATGTGGATT 58.725 40.909 8.23 0.00 44.12 3.01
7766 9666 4.601019 CGACAATTAATGTGGATTGGAGC 58.399 43.478 0.00 0.00 44.12 4.70
7817 9731 6.545666 TGTGTGAATATGTGTTCTGTCCTTTT 59.454 34.615 0.00 0.00 0.00 2.27
7818 9732 7.078228 GTGTGAATATGTGTTCTGTCCTTTTC 58.922 38.462 0.00 0.00 0.00 2.29
7819 9733 6.073276 TGTGAATATGTGTTCTGTCCTTTTCG 60.073 38.462 0.00 0.00 0.00 3.46
7820 9734 5.995282 TGAATATGTGTTCTGTCCTTTTCGT 59.005 36.000 0.00 0.00 0.00 3.85
7821 9735 6.147164 TGAATATGTGTTCTGTCCTTTTCGTC 59.853 38.462 0.00 0.00 0.00 4.20
7822 9736 3.254470 TGTGTTCTGTCCTTTTCGTCA 57.746 42.857 0.00 0.00 0.00 4.35
7823 9737 3.601435 TGTGTTCTGTCCTTTTCGTCAA 58.399 40.909 0.00 0.00 0.00 3.18
7824 9738 4.004314 TGTGTTCTGTCCTTTTCGTCAAA 58.996 39.130 0.00 0.00 0.00 2.69
7825 9739 4.456222 TGTGTTCTGTCCTTTTCGTCAAAA 59.544 37.500 0.00 0.00 0.00 2.44
7826 9740 5.048643 TGTGTTCTGTCCTTTTCGTCAAAAA 60.049 36.000 0.00 0.00 35.56 1.94
7849 9763 3.733443 AAAATGTGTTCTGTCCTTGCC 57.267 42.857 0.00 0.00 0.00 4.52
7850 9764 1.620822 AATGTGTTCTGTCCTTGCCC 58.379 50.000 0.00 0.00 0.00 5.36
7851 9765 0.251341 ATGTGTTCTGTCCTTGCCCC 60.251 55.000 0.00 0.00 0.00 5.80
7852 9766 1.352622 TGTGTTCTGTCCTTGCCCCT 61.353 55.000 0.00 0.00 0.00 4.79
7853 9767 0.890996 GTGTTCTGTCCTTGCCCCTG 60.891 60.000 0.00 0.00 0.00 4.45
7854 9768 1.303643 GTTCTGTCCTTGCCCCTGG 60.304 63.158 0.00 0.00 0.00 4.45
7855 9769 1.774217 TTCTGTCCTTGCCCCTGGT 60.774 57.895 0.00 0.00 0.00 4.00
7856 9770 2.034687 CTGTCCTTGCCCCTGGTG 59.965 66.667 0.00 0.00 0.00 4.17
7857 9771 2.449518 TGTCCTTGCCCCTGGTGA 60.450 61.111 0.00 0.00 0.00 4.02
7858 9772 1.852157 TGTCCTTGCCCCTGGTGAT 60.852 57.895 0.00 0.00 0.00 3.06
7859 9773 1.379044 GTCCTTGCCCCTGGTGATG 60.379 63.158 0.00 0.00 0.00 3.07
7860 9774 2.043652 CCTTGCCCCTGGTGATGG 60.044 66.667 0.00 0.00 0.00 3.51
7861 9775 2.765969 CTTGCCCCTGGTGATGGT 59.234 61.111 0.00 0.00 0.00 3.55
7862 9776 1.679977 CTTGCCCCTGGTGATGGTG 60.680 63.158 0.00 0.00 0.00 4.17
7863 9777 2.430704 CTTGCCCCTGGTGATGGTGT 62.431 60.000 0.00 0.00 0.00 4.16
7864 9778 2.044946 GCCCCTGGTGATGGTGTC 60.045 66.667 0.00 0.00 0.00 3.67
7865 9779 2.905996 GCCCCTGGTGATGGTGTCA 61.906 63.158 0.00 0.00 0.00 3.58
7866 9780 2.001803 CCCCTGGTGATGGTGTCAT 58.998 57.895 0.00 0.00 39.48 3.06
7868 9782 0.107017 CCCTGGTGATGGTGTCATCC 60.107 60.000 4.22 0.00 46.92 3.51
7869 9783 0.914644 CCTGGTGATGGTGTCATCCT 59.085 55.000 4.22 0.00 46.92 3.24
7870 9784 1.283029 CCTGGTGATGGTGTCATCCTT 59.717 52.381 4.22 0.00 46.92 3.36
7871 9785 2.362736 CTGGTGATGGTGTCATCCTTG 58.637 52.381 4.22 0.00 46.92 3.61
7872 9786 1.704628 TGGTGATGGTGTCATCCTTGT 59.295 47.619 4.22 0.00 46.92 3.16
7873 9787 2.086869 GGTGATGGTGTCATCCTTGTG 58.913 52.381 4.22 0.00 46.92 3.33
7874 9788 2.086869 GTGATGGTGTCATCCTTGTGG 58.913 52.381 4.22 0.00 46.92 4.17
7875 9789 1.098050 GATGGTGTCATCCTTGTGGC 58.902 55.000 0.00 0.00 42.92 5.01
7876 9790 0.677731 ATGGTGTCATCCTTGTGGCG 60.678 55.000 0.00 0.00 0.00 5.69
7877 9791 1.302511 GGTGTCATCCTTGTGGCGT 60.303 57.895 0.00 0.00 0.00 5.68
7878 9792 1.577328 GGTGTCATCCTTGTGGCGTG 61.577 60.000 0.00 0.00 0.00 5.34
7879 9793 0.884704 GTGTCATCCTTGTGGCGTGT 60.885 55.000 0.00 0.00 0.00 4.49
7880 9794 0.884259 TGTCATCCTTGTGGCGTGTG 60.884 55.000 0.00 0.00 0.00 3.82
7881 9795 1.302431 TCATCCTTGTGGCGTGTGG 60.302 57.895 0.00 0.00 0.00 4.17
7882 9796 1.302431 CATCCTTGTGGCGTGTGGA 60.302 57.895 0.00 0.00 0.00 4.02
7883 9797 1.003355 ATCCTTGTGGCGTGTGGAG 60.003 57.895 0.00 0.00 0.00 3.86
7884 9798 1.768684 ATCCTTGTGGCGTGTGGAGT 61.769 55.000 0.00 0.00 0.00 3.85
7885 9799 1.525995 CCTTGTGGCGTGTGGAGTT 60.526 57.895 0.00 0.00 0.00 3.01
7886 9800 1.101049 CCTTGTGGCGTGTGGAGTTT 61.101 55.000 0.00 0.00 0.00 2.66
7887 9801 0.738389 CTTGTGGCGTGTGGAGTTTT 59.262 50.000 0.00 0.00 0.00 2.43
7888 9802 1.134175 CTTGTGGCGTGTGGAGTTTTT 59.866 47.619 0.00 0.00 0.00 1.94
7889 9803 0.736053 TGTGGCGTGTGGAGTTTTTC 59.264 50.000 0.00 0.00 0.00 2.29
7890 9804 0.030235 GTGGCGTGTGGAGTTTTTCC 59.970 55.000 0.00 0.00 46.98 3.13
7891 9805 0.106918 TGGCGTGTGGAGTTTTTCCT 60.107 50.000 0.00 0.00 46.92 3.36
7892 9806 1.029681 GGCGTGTGGAGTTTTTCCTT 58.970 50.000 0.00 0.00 46.92 3.36
7893 9807 1.407618 GGCGTGTGGAGTTTTTCCTTT 59.592 47.619 0.00 0.00 46.92 3.11
7894 9808 2.543031 GGCGTGTGGAGTTTTTCCTTTC 60.543 50.000 0.00 0.00 46.92 2.62
7895 9809 2.357952 GCGTGTGGAGTTTTTCCTTTCT 59.642 45.455 0.00 0.00 46.92 2.52
7896 9810 3.181490 GCGTGTGGAGTTTTTCCTTTCTT 60.181 43.478 0.00 0.00 46.92 2.52
7897 9811 4.598062 CGTGTGGAGTTTTTCCTTTCTTC 58.402 43.478 0.00 0.00 46.92 2.87
7898 9812 4.598062 GTGTGGAGTTTTTCCTTTCTTCG 58.402 43.478 0.00 0.00 46.92 3.79
7899 9813 4.095932 GTGTGGAGTTTTTCCTTTCTTCGT 59.904 41.667 0.00 0.00 46.92 3.85
7900 9814 4.095782 TGTGGAGTTTTTCCTTTCTTCGTG 59.904 41.667 0.00 0.00 46.92 4.35
7901 9815 3.630312 TGGAGTTTTTCCTTTCTTCGTGG 59.370 43.478 0.00 0.00 46.92 4.94
7902 9816 3.550233 GGAGTTTTTCCTTTCTTCGTGGC 60.550 47.826 0.00 0.00 43.16 5.01
7903 9817 3.020984 AGTTTTTCCTTTCTTCGTGGCA 58.979 40.909 0.00 0.00 0.00 4.92
7904 9818 3.113322 GTTTTTCCTTTCTTCGTGGCAC 58.887 45.455 7.79 7.79 0.00 5.01
7905 9819 1.314730 TTTCCTTTCTTCGTGGCACC 58.685 50.000 12.86 0.00 0.00 5.01
7906 9820 0.472471 TTCCTTTCTTCGTGGCACCT 59.528 50.000 12.86 0.00 0.00 4.00
7907 9821 0.472471 TCCTTTCTTCGTGGCACCTT 59.528 50.000 12.86 0.00 0.00 3.50
7908 9822 1.133915 TCCTTTCTTCGTGGCACCTTT 60.134 47.619 12.86 0.00 0.00 3.11
7909 9823 1.681264 CCTTTCTTCGTGGCACCTTTT 59.319 47.619 12.86 0.00 0.00 2.27
7910 9824 2.100749 CCTTTCTTCGTGGCACCTTTTT 59.899 45.455 12.86 0.00 0.00 1.94
7950 9864 9.642327 TTTCATTCCATTAATCAATGTGTTGAG 57.358 29.630 13.06 0.00 46.75 3.02
7951 9865 7.259882 TCATTCCATTAATCAATGTGTTGAGC 58.740 34.615 13.06 0.00 46.75 4.26
7952 9866 6.587206 TTCCATTAATCAATGTGTTGAGCA 57.413 33.333 0.00 0.00 46.75 4.26
7953 9867 6.198650 TCCATTAATCAATGTGTTGAGCAG 57.801 37.500 0.00 0.00 46.75 4.24
7954 9868 5.945191 TCCATTAATCAATGTGTTGAGCAGA 59.055 36.000 0.00 0.00 46.75 4.26
7955 9869 6.433716 TCCATTAATCAATGTGTTGAGCAGAA 59.566 34.615 0.00 0.00 46.75 3.02
7956 9870 7.123098 TCCATTAATCAATGTGTTGAGCAGAAT 59.877 33.333 0.00 0.00 46.75 2.40
7957 9871 7.434307 CCATTAATCAATGTGTTGAGCAGAATC 59.566 37.037 0.00 0.00 46.75 2.52
7958 9872 4.611310 ATCAATGTGTTGAGCAGAATCG 57.389 40.909 0.00 0.00 46.75 3.34
7959 9873 3.402110 TCAATGTGTTGAGCAGAATCGT 58.598 40.909 0.00 0.00 39.36 3.73
7960 9874 3.433274 TCAATGTGTTGAGCAGAATCGTC 59.567 43.478 0.00 0.00 39.36 4.20
7961 9875 1.418373 TGTGTTGAGCAGAATCGTCG 58.582 50.000 0.00 0.00 0.00 5.12
7962 9876 0.716108 GTGTTGAGCAGAATCGTCGG 59.284 55.000 0.00 0.00 0.00 4.79
7963 9877 1.014044 TGTTGAGCAGAATCGTCGGC 61.014 55.000 0.00 0.00 44.43 5.54
7964 9878 1.014044 GTTGAGCAGAATCGTCGGCA 61.014 55.000 1.86 0.00 46.27 5.69
7965 9879 0.737367 TTGAGCAGAATCGTCGGCAG 60.737 55.000 1.86 0.00 46.27 4.85
8310 10224 2.280592 GGCGGACCGGCGATAATT 60.281 61.111 25.70 0.00 43.33 1.40
8311 10225 1.890510 GGCGGACCGGCGATAATTT 60.891 57.895 25.70 0.00 43.33 1.82
8312 10226 1.568025 GCGGACCGGCGATAATTTC 59.432 57.895 17.22 0.00 0.00 2.17
8322 10236 1.305201 CGATAATTTCGGTGTGGGGG 58.695 55.000 0.00 0.00 44.28 5.40
8323 10237 1.029681 GATAATTTCGGTGTGGGGGC 58.970 55.000 0.00 0.00 0.00 5.80
8324 10238 0.750182 ATAATTTCGGTGTGGGGGCG 60.750 55.000 0.00 0.00 0.00 6.13
8325 10239 1.839148 TAATTTCGGTGTGGGGGCGA 61.839 55.000 0.00 0.00 0.00 5.54
8326 10240 2.493273 AATTTCGGTGTGGGGGCGAT 62.493 55.000 0.00 0.00 0.00 4.58
8327 10241 2.493273 ATTTCGGTGTGGGGGCGATT 62.493 55.000 0.00 0.00 0.00 3.34
8328 10242 3.910914 TTCGGTGTGGGGGCGATTG 62.911 63.158 0.00 0.00 0.00 2.67
8329 10243 4.715523 CGGTGTGGGGGCGATTGT 62.716 66.667 0.00 0.00 0.00 2.71
8330 10244 3.061848 GGTGTGGGGGCGATTGTG 61.062 66.667 0.00 0.00 0.00 3.33
8331 10245 2.282180 GTGTGGGGGCGATTGTGT 60.282 61.111 0.00 0.00 0.00 3.72
8332 10246 1.901464 GTGTGGGGGCGATTGTGTT 60.901 57.895 0.00 0.00 0.00 3.32
8333 10247 1.602323 TGTGGGGGCGATTGTGTTC 60.602 57.895 0.00 0.00 0.00 3.18
8334 10248 2.034999 TGGGGGCGATTGTGTTCC 59.965 61.111 0.00 0.00 0.00 3.62
8335 10249 2.754254 GGGGGCGATTGTGTTCCC 60.754 66.667 0.00 0.00 38.03 3.97
8336 10250 2.034999 GGGGCGATTGTGTTCCCA 59.965 61.111 0.00 0.00 40.53 4.37
8337 10251 2.046285 GGGGCGATTGTGTTCCCAG 61.046 63.158 0.00 0.00 40.53 4.45
8338 10252 2.046285 GGGCGATTGTGTTCCCAGG 61.046 63.158 0.00 0.00 38.62 4.45
8339 10253 1.303317 GGCGATTGTGTTCCCAGGT 60.303 57.895 0.00 0.00 0.00 4.00
8340 10254 1.305930 GGCGATTGTGTTCCCAGGTC 61.306 60.000 0.00 0.00 0.00 3.85
8341 10255 1.635663 GCGATTGTGTTCCCAGGTCG 61.636 60.000 0.00 0.00 0.00 4.79
8342 10256 1.635663 CGATTGTGTTCCCAGGTCGC 61.636 60.000 0.00 0.00 0.00 5.19
8343 10257 1.303317 ATTGTGTTCCCAGGTCGCC 60.303 57.895 0.00 0.00 0.00 5.54
8344 10258 2.764637 ATTGTGTTCCCAGGTCGCCC 62.765 60.000 0.00 0.00 0.00 6.13
8345 10259 4.717313 GTGTTCCCAGGTCGCCCC 62.717 72.222 0.00 0.00 0.00 5.80
8347 10261 2.686106 GTTCCCAGGTCGCCCCTA 60.686 66.667 0.00 0.00 43.86 3.53
8348 10262 2.365105 TTCCCAGGTCGCCCCTAG 60.365 66.667 0.00 0.00 43.86 3.02
8349 10263 2.938511 TTCCCAGGTCGCCCCTAGA 61.939 63.158 0.00 0.00 43.86 2.43
8350 10264 3.155167 CCCAGGTCGCCCCTAGAC 61.155 72.222 0.00 0.00 43.86 2.59
8351 10265 3.528370 CCAGGTCGCCCCTAGACG 61.528 72.222 0.00 0.00 43.86 4.18
8352 10266 4.208686 CAGGTCGCCCCTAGACGC 62.209 72.222 0.00 0.00 43.86 5.19
8353 10267 4.444081 AGGTCGCCCCTAGACGCT 62.444 66.667 0.00 0.00 43.87 5.07
8354 10268 4.208686 GGTCGCCCCTAGACGCTG 62.209 72.222 0.00 0.00 39.38 5.18
8355 10269 3.450115 GTCGCCCCTAGACGCTGT 61.450 66.667 0.00 0.00 0.00 4.40
8356 10270 2.678934 TCGCCCCTAGACGCTGTT 60.679 61.111 0.00 0.00 0.00 3.16
8357 10271 2.264794 CGCCCCTAGACGCTGTTT 59.735 61.111 0.00 0.00 0.00 2.83
8358 10272 1.375523 CGCCCCTAGACGCTGTTTT 60.376 57.895 0.00 0.00 0.00 2.43
8359 10273 0.953960 CGCCCCTAGACGCTGTTTTT 60.954 55.000 0.00 0.00 0.00 1.94
8380 10294 7.553881 TTTTTGAAACATAAAATCGGCCAAA 57.446 28.000 2.24 0.00 0.00 3.28
8381 10295 6.532365 TTTGAAACATAAAATCGGCCAAAC 57.468 33.333 2.24 0.00 0.00 2.93
8382 10296 5.201713 TGAAACATAAAATCGGCCAAACA 57.798 34.783 2.24 0.00 0.00 2.83
8383 10297 4.985409 TGAAACATAAAATCGGCCAAACAC 59.015 37.500 2.24 0.00 0.00 3.32
8384 10298 3.210358 ACATAAAATCGGCCAAACACG 57.790 42.857 2.24 0.00 0.00 4.49
8385 10299 2.814919 ACATAAAATCGGCCAAACACGA 59.185 40.909 2.24 0.00 43.85 4.35
8386 10300 2.973419 TAAAATCGGCCAAACACGAC 57.027 45.000 2.24 0.00 42.39 4.34
8387 10301 1.025812 AAAATCGGCCAAACACGACA 58.974 45.000 2.24 0.00 42.39 4.35
8388 10302 0.309612 AAATCGGCCAAACACGACAC 59.690 50.000 2.24 0.00 42.39 3.67
8389 10303 0.816018 AATCGGCCAAACACGACACA 60.816 50.000 2.24 0.00 42.39 3.72
8390 10304 0.816018 ATCGGCCAAACACGACACAA 60.816 50.000 2.24 0.00 42.39 3.33
8391 10305 1.025113 TCGGCCAAACACGACACAAA 61.025 50.000 2.24 0.00 33.69 2.83
8392 10306 0.030101 CGGCCAAACACGACACAAAT 59.970 50.000 2.24 0.00 0.00 2.32
8393 10307 1.535015 CGGCCAAACACGACACAAATT 60.535 47.619 2.24 0.00 0.00 1.82
8394 10308 2.124122 GGCCAAACACGACACAAATTC 58.876 47.619 0.00 0.00 0.00 2.17
8395 10309 1.778591 GCCAAACACGACACAAATTCG 59.221 47.619 0.00 0.00 42.36 3.34
8397 10311 3.033185 CCAAACACGACACAAATTCGTC 58.967 45.455 0.00 0.00 46.61 4.20
8398 10312 3.033185 CAAACACGACACAAATTCGTCC 58.967 45.455 0.00 0.00 46.61 4.79
8399 10313 1.942677 ACACGACACAAATTCGTCCA 58.057 45.000 0.00 0.00 46.61 4.02
8400 10314 2.281517 ACACGACACAAATTCGTCCAA 58.718 42.857 0.00 0.00 46.61 3.53
8401 10315 2.678836 ACACGACACAAATTCGTCCAAA 59.321 40.909 0.00 0.00 46.61 3.28
8402 10316 3.033185 CACGACACAAATTCGTCCAAAC 58.967 45.455 0.00 0.00 46.61 2.93
8403 10317 2.940410 ACGACACAAATTCGTCCAAACT 59.060 40.909 0.00 0.00 46.61 2.66
8404 10318 4.025563 CACGACACAAATTCGTCCAAACTA 60.026 41.667 0.00 0.00 46.61 2.24
8405 10319 4.210537 ACGACACAAATTCGTCCAAACTAG 59.789 41.667 0.00 0.00 46.61 2.57
8406 10320 4.377022 CGACACAAATTCGTCCAAACTAGG 60.377 45.833 0.00 0.00 0.00 3.02
8407 10321 3.818773 ACACAAATTCGTCCAAACTAGGG 59.181 43.478 0.00 0.00 0.00 3.53
8408 10322 3.190535 CACAAATTCGTCCAAACTAGGGG 59.809 47.826 0.00 0.00 0.00 4.79
8409 10323 2.124277 AATTCGTCCAAACTAGGGGC 57.876 50.000 0.00 0.00 0.00 5.80
8413 10327 3.875865 GTCCAAACTAGGGGCGATT 57.124 52.632 0.00 0.00 0.00 3.34
8414 10328 2.124277 GTCCAAACTAGGGGCGATTT 57.876 50.000 0.00 0.00 0.00 2.17
8415 10329 2.014857 GTCCAAACTAGGGGCGATTTC 58.985 52.381 0.00 0.00 0.00 2.17
8416 10330 1.631388 TCCAAACTAGGGGCGATTTCA 59.369 47.619 0.00 0.00 0.00 2.69
8417 10331 2.241176 TCCAAACTAGGGGCGATTTCAT 59.759 45.455 0.00 0.00 0.00 2.57
8418 10332 3.023832 CCAAACTAGGGGCGATTTCATT 58.976 45.455 0.00 0.00 0.00 2.57
8419 10333 3.181487 CCAAACTAGGGGCGATTTCATTG 60.181 47.826 0.00 0.00 0.00 2.82
8420 10334 3.644966 AACTAGGGGCGATTTCATTGA 57.355 42.857 0.00 0.00 0.00 2.57
8421 10335 3.864789 ACTAGGGGCGATTTCATTGAT 57.135 42.857 0.00 0.00 0.00 2.57
8422 10336 4.974645 ACTAGGGGCGATTTCATTGATA 57.025 40.909 0.00 0.00 0.00 2.15
8423 10337 5.505181 ACTAGGGGCGATTTCATTGATAT 57.495 39.130 0.00 0.00 0.00 1.63
8424 10338 5.880901 ACTAGGGGCGATTTCATTGATATT 58.119 37.500 0.00 0.00 0.00 1.28
8425 10339 6.306987 ACTAGGGGCGATTTCATTGATATTT 58.693 36.000 0.00 0.00 0.00 1.40
8426 10340 5.458041 AGGGGCGATTTCATTGATATTTG 57.542 39.130 0.00 0.00 0.00 2.32
8427 10341 4.895297 AGGGGCGATTTCATTGATATTTGT 59.105 37.500 0.00 0.00 0.00 2.83
8428 10342 6.068010 AGGGGCGATTTCATTGATATTTGTA 58.932 36.000 0.00 0.00 0.00 2.41
8429 10343 6.016276 AGGGGCGATTTCATTGATATTTGTAC 60.016 38.462 0.00 0.00 0.00 2.90
8430 10344 6.238897 GGGGCGATTTCATTGATATTTGTACA 60.239 38.462 0.00 0.00 0.00 2.90
8431 10345 7.199766 GGGCGATTTCATTGATATTTGTACAA 58.800 34.615 3.59 3.59 0.00 2.41
8432 10346 7.704472 GGGCGATTTCATTGATATTTGTACAAA 59.296 33.333 22.58 22.58 34.46 2.83
8433 10347 9.081997 GGCGATTTCATTGATATTTGTACAAAA 57.918 29.630 23.97 13.85 33.56 2.44
8478 10392 7.673810 AAACACAAACTAAAAACGACTATGC 57.326 32.000 0.00 0.00 0.00 3.14
8479 10393 5.754778 ACACAAACTAAAAACGACTATGCC 58.245 37.500 0.00 0.00 0.00 4.40
8480 10394 5.151389 CACAAACTAAAAACGACTATGCCC 58.849 41.667 0.00 0.00 0.00 5.36
8481 10395 4.822896 ACAAACTAAAAACGACTATGCCCA 59.177 37.500 0.00 0.00 0.00 5.36
8482 10396 5.048991 ACAAACTAAAAACGACTATGCCCAG 60.049 40.000 0.00 0.00 0.00 4.45
8483 10397 3.007635 ACTAAAAACGACTATGCCCAGC 58.992 45.455 0.00 0.00 0.00 4.85
8484 10398 1.173913 AAAAACGACTATGCCCAGCC 58.826 50.000 0.00 0.00 0.00 4.85
8485 10399 0.037590 AAAACGACTATGCCCAGCCA 59.962 50.000 0.00 0.00 0.00 4.75
8486 10400 0.676782 AAACGACTATGCCCAGCCAC 60.677 55.000 0.00 0.00 0.00 5.01
8487 10401 2.203070 CGACTATGCCCAGCCACC 60.203 66.667 0.00 0.00 0.00 4.61
8488 10402 2.203070 GACTATGCCCAGCCACCG 60.203 66.667 0.00 0.00 0.00 4.94
8489 10403 4.489771 ACTATGCCCAGCCACCGC 62.490 66.667 0.00 0.00 0.00 5.68
8497 10411 4.803426 CAGCCACCGCCGTCTCTC 62.803 72.222 0.00 0.00 34.57 3.20
8503 10417 4.933064 CCGCCGTCTCTCGCCATC 62.933 72.222 0.00 0.00 38.35 3.51
8504 10418 3.893763 CGCCGTCTCTCGCCATCT 61.894 66.667 0.00 0.00 38.35 2.90
8505 10419 2.543802 CGCCGTCTCTCGCCATCTA 61.544 63.158 0.00 0.00 38.35 1.98
8506 10420 1.008309 GCCGTCTCTCGCCATCTAC 60.008 63.158 0.00 0.00 38.35 2.59
8507 10421 1.725557 GCCGTCTCTCGCCATCTACA 61.726 60.000 0.00 0.00 38.35 2.74
8508 10422 0.955178 CCGTCTCTCGCCATCTACAT 59.045 55.000 0.00 0.00 38.35 2.29
8509 10423 1.335415 CCGTCTCTCGCCATCTACATG 60.335 57.143 0.00 0.00 38.35 3.21
8510 10424 1.777101 GTCTCTCGCCATCTACATGC 58.223 55.000 0.00 0.00 0.00 4.06
8511 10425 0.676184 TCTCTCGCCATCTACATGCC 59.324 55.000 0.00 0.00 0.00 4.40
8512 10426 0.665670 CTCTCGCCATCTACATGCCG 60.666 60.000 0.00 0.00 32.07 5.69
8513 10427 1.106944 TCTCGCCATCTACATGCCGA 61.107 55.000 0.00 0.00 37.53 5.54
8514 10428 1.363807 TCGCCATCTACATGCCGAG 59.636 57.895 0.00 0.00 35.06 4.63
8515 10429 1.665916 CGCCATCTACATGCCGAGG 60.666 63.158 0.00 0.00 32.53 4.63
8516 10430 1.748403 GCCATCTACATGCCGAGGA 59.252 57.895 0.00 0.00 0.00 3.71
8517 10431 0.320247 GCCATCTACATGCCGAGGAG 60.320 60.000 0.00 0.00 0.00 3.69
8518 10432 0.320247 CCATCTACATGCCGAGGAGC 60.320 60.000 0.00 0.00 0.00 4.70
8519 10433 0.320247 CATCTACATGCCGAGGAGCC 60.320 60.000 0.00 0.00 0.00 4.70
8520 10434 0.470833 ATCTACATGCCGAGGAGCCT 60.471 55.000 0.00 0.00 0.00 4.58
8521 10435 1.068753 CTACATGCCGAGGAGCCTG 59.931 63.158 0.00 0.00 34.88 4.85
8522 10436 1.680522 CTACATGCCGAGGAGCCTGT 61.681 60.000 0.00 0.39 43.00 4.00
8523 10437 0.396556 TACATGCCGAGGAGCCTGTA 60.397 55.000 0.00 0.00 41.17 2.74
8524 10438 1.068753 CATGCCGAGGAGCCTGTAG 59.931 63.158 0.00 0.00 0.00 2.74
8525 10439 1.075970 ATGCCGAGGAGCCTGTAGA 60.076 57.895 0.00 0.00 0.00 2.59
8526 10440 0.687757 ATGCCGAGGAGCCTGTAGAA 60.688 55.000 0.00 0.00 0.00 2.10
8527 10441 1.142097 GCCGAGGAGCCTGTAGAAC 59.858 63.158 0.00 0.00 0.00 3.01
8528 10442 1.817209 CCGAGGAGCCTGTAGAACC 59.183 63.158 0.00 0.00 0.00 3.62
8529 10443 1.433879 CGAGGAGCCTGTAGAACCG 59.566 63.158 0.00 0.00 0.00 4.44
8530 10444 1.817209 GAGGAGCCTGTAGAACCGG 59.183 63.158 0.00 0.00 0.00 5.28
8531 10445 1.677637 GAGGAGCCTGTAGAACCGGG 61.678 65.000 6.32 0.00 0.00 5.73
8532 10446 1.988406 GGAGCCTGTAGAACCGGGT 60.988 63.158 6.32 0.00 35.89 5.28
8533 10447 1.218316 GAGCCTGTAGAACCGGGTG 59.782 63.158 6.32 0.00 33.32 4.61
8534 10448 1.535687 AGCCTGTAGAACCGGGTGT 60.536 57.895 6.32 0.00 31.94 4.16
8535 10449 0.251922 AGCCTGTAGAACCGGGTGTA 60.252 55.000 6.32 0.00 31.94 2.90
8536 10450 0.175073 GCCTGTAGAACCGGGTGTAG 59.825 60.000 6.32 0.00 0.00 2.74
8537 10451 1.553706 CCTGTAGAACCGGGTGTAGT 58.446 55.000 6.32 0.00 0.00 2.73
8538 10452 1.475682 CCTGTAGAACCGGGTGTAGTC 59.524 57.143 6.32 0.00 0.00 2.59
8539 10453 1.131883 CTGTAGAACCGGGTGTAGTCG 59.868 57.143 6.32 0.00 0.00 4.18
8540 10454 0.179153 GTAGAACCGGGTGTAGTCGC 60.179 60.000 6.32 0.00 0.00 5.19
8541 10455 1.315257 TAGAACCGGGTGTAGTCGCC 61.315 60.000 6.32 0.00 42.95 5.54
8542 10456 3.976902 GAACCGGGTGTAGTCGCCG 62.977 68.421 6.32 0.00 44.47 6.46
8559 10473 3.330853 GCCGTCGCCGTCATCATC 61.331 66.667 0.00 0.00 0.00 2.92
8560 10474 3.024609 CCGTCGCCGTCATCATCG 61.025 66.667 0.00 0.00 0.00 3.84
8561 10475 2.277949 CGTCGCCGTCATCATCGT 60.278 61.111 0.00 0.00 0.00 3.73
8562 10476 2.286559 CGTCGCCGTCATCATCGTC 61.287 63.158 0.00 0.00 0.00 4.20
8563 10477 1.226575 GTCGCCGTCATCATCGTCA 60.227 57.895 0.00 0.00 0.00 4.35
8564 10478 1.226575 TCGCCGTCATCATCGTCAC 60.227 57.895 0.00 0.00 0.00 3.67
8565 10479 2.230940 CGCCGTCATCATCGTCACC 61.231 63.158 0.00 0.00 0.00 4.02
8566 10480 2.230940 GCCGTCATCATCGTCACCG 61.231 63.158 0.00 0.00 0.00 4.94
8567 10481 1.138883 CCGTCATCATCGTCACCGT 59.861 57.895 0.00 0.00 35.01 4.83
8568 10482 1.139816 CCGTCATCATCGTCACCGTG 61.140 60.000 0.00 0.00 35.01 4.94
8569 10483 0.179174 CGTCATCATCGTCACCGTGA 60.179 55.000 0.00 0.00 35.01 4.35
8570 10484 1.533965 CGTCATCATCGTCACCGTGAT 60.534 52.381 4.13 0.00 36.18 3.06
8571 10485 1.854743 GTCATCATCGTCACCGTGATG 59.145 52.381 13.72 13.72 44.59 3.07
8572 10486 1.202405 TCATCATCGTCACCGTGATGG 60.202 52.381 18.61 8.25 44.06 3.51
8573 10487 0.104855 ATCATCGTCACCGTGATGGG 59.895 55.000 18.61 12.24 44.64 4.00
8574 10488 1.218047 CATCGTCACCGTGATGGGT 59.782 57.895 18.61 7.19 44.64 4.51
8596 10510 4.697756 CCGCCGTCCTTGCTCCAA 62.698 66.667 0.00 0.00 0.00 3.53
8597 10511 3.423154 CGCCGTCCTTGCTCCAAC 61.423 66.667 0.00 0.00 0.00 3.77
8598 10512 3.056328 GCCGTCCTTGCTCCAACC 61.056 66.667 0.00 0.00 0.00 3.77
8599 10513 2.359975 CCGTCCTTGCTCCAACCC 60.360 66.667 0.00 0.00 0.00 4.11
8600 10514 2.750350 CGTCCTTGCTCCAACCCT 59.250 61.111 0.00 0.00 0.00 4.34
8601 10515 1.672356 CGTCCTTGCTCCAACCCTG 60.672 63.158 0.00 0.00 0.00 4.45
8602 10516 1.761174 GTCCTTGCTCCAACCCTGA 59.239 57.895 0.00 0.00 0.00 3.86
8603 10517 0.606673 GTCCTTGCTCCAACCCTGAC 60.607 60.000 0.00 0.00 0.00 3.51
8604 10518 1.303643 CCTTGCTCCAACCCTGACC 60.304 63.158 0.00 0.00 0.00 4.02
8605 10519 1.455849 CTTGCTCCAACCCTGACCA 59.544 57.895 0.00 0.00 0.00 4.02
8606 10520 0.607489 CTTGCTCCAACCCTGACCAG 60.607 60.000 0.00 0.00 0.00 4.00
8607 10521 2.360475 GCTCCAACCCTGACCAGC 60.360 66.667 0.00 0.00 0.00 4.85
8608 10522 2.046892 CTCCAACCCTGACCAGCG 60.047 66.667 0.00 0.00 0.00 5.18
8609 10523 2.847234 TCCAACCCTGACCAGCGT 60.847 61.111 0.00 0.00 0.00 5.07
8610 10524 2.358737 CCAACCCTGACCAGCGTC 60.359 66.667 0.00 0.00 39.66 5.19
8611 10525 2.738521 CAACCCTGACCAGCGTCG 60.739 66.667 0.00 0.00 42.37 5.12
8612 10526 4.681978 AACCCTGACCAGCGTCGC 62.682 66.667 9.80 9.80 42.37 5.19
8616 10530 4.498520 CTGACCAGCGTCGCCGAT 62.499 66.667 14.86 0.00 42.37 4.18
8652 10566 4.933064 CTCGGGCGCATCCTCGTC 62.933 72.222 10.83 0.00 34.39 4.20
8658 10572 4.538283 CGCATCCTCGTCGTCGCT 62.538 66.667 0.00 0.00 36.96 4.93
8659 10573 2.951745 GCATCCTCGTCGTCGCTG 60.952 66.667 0.00 0.00 36.96 5.18
8660 10574 2.485582 CATCCTCGTCGTCGCTGT 59.514 61.111 0.00 0.00 36.96 4.40
8661 10575 1.583967 CATCCTCGTCGTCGCTGTC 60.584 63.158 0.00 0.00 36.96 3.51
8662 10576 3.097137 ATCCTCGTCGTCGCTGTCG 62.097 63.158 0.00 0.00 36.96 4.35
8663 10577 3.785499 CCTCGTCGTCGCTGTCGA 61.785 66.667 0.00 0.00 43.28 4.20
8664 10578 2.276120 CTCGTCGTCGCTGTCGAG 60.276 66.667 11.80 11.80 46.46 4.04
8665 10579 3.703939 CTCGTCGTCGCTGTCGAGG 62.704 68.421 15.49 9.18 46.46 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 104 9.241919 TGTGATACAAAATTGTAATCACCAGAT 57.758 29.630 25.36 8.30 45.74 2.90
132 133 5.468746 GGCAGTCAATTACACTGTTGTAGAA 59.531 40.000 14.99 0.00 42.89 2.10
140 141 4.164822 CCTTTGGCAGTCAATTACACTG 57.835 45.455 10.97 10.97 43.66 3.66
218 219 6.441093 TGATGATTTGTGCAATTACCTCTC 57.559 37.500 0.00 0.00 0.00 3.20
235 236 9.362539 GCAAAATCAAGAACAATAGTTGATGAT 57.637 29.630 0.00 0.00 39.47 2.45
237 238 8.523523 TGCAAAATCAAGAACAATAGTTGATG 57.476 30.769 0.00 0.00 39.47 3.07
238 239 8.579006 TCTGCAAAATCAAGAACAATAGTTGAT 58.421 29.630 0.00 0.00 41.62 2.57
320 330 6.426328 CCTAAATGCTGGATTAGACTTAGCTG 59.574 42.308 0.00 0.00 35.50 4.24
372 382 3.628942 TGCATGCACTTACCAATGAGATC 59.371 43.478 18.46 0.00 0.00 2.75
387 397 1.765597 TTTTGCCACCCATGCATGCA 61.766 50.000 25.04 25.04 38.76 3.96
388 398 0.605860 TTTTTGCCACCCATGCATGC 60.606 50.000 21.69 11.82 38.76 4.06
389 399 3.627645 TTTTTGCCACCCATGCATG 57.372 47.368 20.19 20.19 38.76 4.06
413 423 2.159179 TAGACTGCTGATGTGGCCTA 57.841 50.000 3.32 0.00 0.00 3.93
414 424 1.065854 GTTAGACTGCTGATGTGGCCT 60.066 52.381 3.32 0.00 0.00 5.19
524 534 8.145122 TGGCTCGGTTTTTCTAATTTAACATTT 58.855 29.630 0.00 0.00 0.00 2.32
553 563 3.897239 CCAGGTTAGCATGGGAATGTTA 58.103 45.455 1.82 0.00 42.42 2.41
566 576 3.458189 GACCATCAATCGACCAGGTTAG 58.542 50.000 0.00 0.00 0.00 2.34
577 587 6.212955 TGAAAAAGAAAACCGACCATCAATC 58.787 36.000 0.00 0.00 0.00 2.67
597 607 4.983538 CCGCTTATAAATGCATGCATGAAA 59.016 37.500 32.79 20.80 36.68 2.69
598 608 4.548494 CCGCTTATAAATGCATGCATGAA 58.452 39.130 32.79 21.67 36.68 2.57
602 612 2.580962 TCCCGCTTATAAATGCATGCA 58.419 42.857 25.04 25.04 0.00 3.96
605 615 4.265073 GAGGATCCCGCTTATAAATGCAT 58.735 43.478 8.55 0.00 0.00 3.96
659 689 8.617809 ACAAAACATCGTATAATGGTGTAATCC 58.382 33.333 0.00 0.00 0.00 3.01
699 729 8.100164 TCTATTGGTGATGATTTACACAGAACA 58.900 33.333 0.00 0.00 38.57 3.18
702 732 9.987272 CTATCTATTGGTGATGATTTACACAGA 57.013 33.333 0.00 0.00 38.57 3.41
703 733 9.770097 ACTATCTATTGGTGATGATTTACACAG 57.230 33.333 0.00 0.00 38.57 3.66
704 734 9.546428 CACTATCTATTGGTGATGATTTACACA 57.454 33.333 0.00 0.00 38.57 3.72
705 735 8.993121 CCACTATCTATTGGTGATGATTTACAC 58.007 37.037 0.00 0.00 36.44 2.90
706 736 8.713971 ACCACTATCTATTGGTGATGATTTACA 58.286 33.333 0.00 0.00 44.80 2.41
707 737 9.561069 AACCACTATCTATTGGTGATGATTTAC 57.439 33.333 0.52 0.00 45.84 2.01
712 742 6.823182 CACAAACCACTATCTATTGGTGATGA 59.177 38.462 14.43 0.00 45.84 2.92
725 755 8.026607 CCGAAATGAAATTACACAAACCACTAT 58.973 33.333 0.00 0.00 33.67 2.12
729 759 6.392625 TCCGAAATGAAATTACACAAACCA 57.607 33.333 0.00 0.00 33.67 3.67
749 779 8.732531 TGGGTTACATAAACTAAATTCTTTCCG 58.267 33.333 0.00 0.00 38.23 4.30
763 793 4.659529 TGGGACACATGGGTTACATAAA 57.340 40.909 0.00 0.00 37.84 1.40
784 814 2.802719 ACCGCATTTAGGGTCATGTTT 58.197 42.857 0.00 0.00 0.00 2.83
841 875 9.760660 CTTTTCGTCGATGATTTTTAGATTCTT 57.239 29.630 8.43 0.00 0.00 2.52
878 916 1.977129 CCAGATCCAATCTCCCTCTCC 59.023 57.143 0.00 0.00 37.58 3.71
880 918 2.022625 TGACCAGATCCAATCTCCCTCT 60.023 50.000 0.00 0.00 37.58 3.69
1492 2029 1.304464 GGGAGGGGAAAACAGGCAG 60.304 63.158 0.00 0.00 0.00 4.85
1493 2030 2.851045 GGGAGGGGAAAACAGGCA 59.149 61.111 0.00 0.00 0.00 4.75
1494 2031 2.361230 CGGGAGGGGAAAACAGGC 60.361 66.667 0.00 0.00 0.00 4.85
1507 2044 3.562232 AACCAAAGGACGCCGGGA 61.562 61.111 2.18 0.00 0.00 5.14
1508 2045 3.361977 CAACCAAAGGACGCCGGG 61.362 66.667 2.18 0.00 0.00 5.73
1511 2048 3.284449 ACGCAACCAAAGGACGCC 61.284 61.111 0.00 0.00 0.00 5.68
1584 2122 2.278206 CGGTGATCGCCACTCTCG 60.278 66.667 24.60 6.06 45.03 4.04
1720 3270 5.600696 ACATGGATGAAGGAACAAAACAAC 58.399 37.500 0.00 0.00 0.00 3.32
1981 3545 1.005294 GGCAAACATTGTCAGCAGCG 61.005 55.000 13.32 0.00 34.79 5.18
1986 3550 3.087031 AGATGGAGGCAAACATTGTCAG 58.913 45.455 0.00 0.00 37.85 3.51
1987 3551 2.821378 CAGATGGAGGCAAACATTGTCA 59.179 45.455 0.00 0.00 37.85 3.58
2094 3662 3.518590 CCGTATTCTCGCTTTAACCACT 58.481 45.455 0.00 0.00 0.00 4.00
2185 3753 7.155328 CAGGTGCCTATACAAGTATTCTTAGG 58.845 42.308 0.00 0.89 32.05 2.69
2192 3760 6.374588 AGACTACAGGTGCCTATACAAGTAT 58.625 40.000 0.00 0.00 0.00 2.12
2389 4008 9.933723 AAAAATTATGTTCAAGGAGAAATCCAG 57.066 29.630 0.00 0.00 38.13 3.86
2685 4305 1.334869 CGAAAATGCCCTGCACTATCC 59.665 52.381 0.00 0.00 43.04 2.59
2688 4308 2.016318 CATCGAAAATGCCCTGCACTA 58.984 47.619 0.00 0.00 43.04 2.74
2882 4502 7.872138 TCATAATTAAACACATCTCCCTCCTT 58.128 34.615 0.00 0.00 0.00 3.36
2946 4566 2.544685 CATAGACGCTCTCCACAAAGG 58.455 52.381 0.00 0.00 39.47 3.11
4008 5631 6.375736 TGGCATATCTCTGTAGACTATACAGC 59.624 42.308 9.63 0.00 43.30 4.40
4338 5961 1.247567 AGTTAAAGCGCACCAGCAAT 58.752 45.000 11.47 0.00 42.27 3.56
4498 6188 1.953559 TCTGAACCAACAGACTGCAC 58.046 50.000 1.25 0.00 41.21 4.57
4822 6515 6.872920 AGAACAAACATAAACTGCAAAGGAA 58.127 32.000 0.00 0.00 0.00 3.36
4916 6609 6.656902 AGATGCAAAGAAGATATGTTCAGGA 58.343 36.000 14.46 6.01 0.00 3.86
5044 6737 5.839621 ACAGTGTAACAAGTCAGTAATCGT 58.160 37.500 0.00 0.00 41.43 3.73
5322 7015 7.339212 GCAATACTATTACCATATGCATTCCCA 59.661 37.037 3.54 0.00 0.00 4.37
5366 7059 8.980143 GCATATTGCTTAAACAGGAGTTAAAA 57.020 30.769 0.00 0.00 40.96 1.52
5990 7683 5.804639 ACAACAGTGCCTGTAATTCAGATA 58.195 37.500 8.07 0.00 44.62 1.98
6005 7698 5.314923 AGGCATAGCAATAAACAACAGTG 57.685 39.130 0.00 0.00 0.00 3.66
6042 7735 8.732746 AGTGCTAAAACCTATTACCACTATTG 57.267 34.615 0.00 0.00 32.55 1.90
6043 7736 9.828039 GTAGTGCTAAAACCTATTACCACTATT 57.172 33.333 0.00 0.00 36.80 1.73
6044 7737 8.427276 GGTAGTGCTAAAACCTATTACCACTAT 58.573 37.037 0.00 0.00 36.80 2.12
6045 7738 7.399765 TGGTAGTGCTAAAACCTATTACCACTA 59.600 37.037 0.00 0.00 34.86 2.74
6046 7739 6.214005 TGGTAGTGCTAAAACCTATTACCACT 59.786 38.462 0.00 0.00 36.30 4.00
6047 7740 6.408869 TGGTAGTGCTAAAACCTATTACCAC 58.591 40.000 0.00 0.00 35.61 4.16
6048 7741 6.623979 TGGTAGTGCTAAAACCTATTACCA 57.376 37.500 0.00 0.00 37.54 3.25
6049 7742 7.926674 TTTGGTAGTGCTAAAACCTATTACC 57.073 36.000 0.00 0.00 34.23 2.85
6050 7743 7.913821 GCATTTGGTAGTGCTAAAACCTATTAC 59.086 37.037 0.00 0.00 38.30 1.89
6051 7744 7.612244 TGCATTTGGTAGTGCTAAAACCTATTA 59.388 33.333 0.00 0.00 41.78 0.98
6052 7745 6.435904 TGCATTTGGTAGTGCTAAAACCTATT 59.564 34.615 0.00 0.00 41.78 1.73
6104 7988 2.387757 AGTAATGGGCGAAAATGGCAT 58.612 42.857 0.00 0.00 35.84 4.40
6230 8114 8.688747 TTGGCATTTCTTATTTCATTTTGGTT 57.311 26.923 0.00 0.00 0.00 3.67
6459 8344 1.323412 TGGTGGCGCAACAAACTATT 58.677 45.000 18.47 0.00 0.00 1.73
6471 8356 4.631131 TGAAGATACAAGATATGGTGGCG 58.369 43.478 0.00 0.00 0.00 5.69
6592 8477 4.533707 AGAGTTGATTCCATGGACTGAAGA 59.466 41.667 15.91 0.00 0.00 2.87
7451 9351 0.468029 ACAAAACTGGCCCCACAGAG 60.468 55.000 0.00 0.00 40.97 3.35
7605 9505 4.423625 ACTGAAGCCAGACTGTAAAAGT 57.576 40.909 0.93 0.00 43.02 2.66
7606 9506 5.529060 AGAAACTGAAGCCAGACTGTAAAAG 59.471 40.000 0.93 0.00 43.02 2.27
7612 9512 2.843701 ACAGAAACTGAAGCCAGACTG 58.156 47.619 5.76 0.00 43.02 3.51
7648 9548 5.942872 AGTAAAATTCATTCAGTCCTTGCG 58.057 37.500 0.00 0.00 0.00 4.85
7670 9570 3.330126 TGGATGGGAGGGAGTAAGTAG 57.670 52.381 0.00 0.00 0.00 2.57
7685 9585 7.650504 CCAAGTCTGCAACAATTAATATGGATG 59.349 37.037 0.00 0.00 0.00 3.51
7701 9601 1.001487 CGAAATTGTGCCAAGTCTGCA 60.001 47.619 0.00 0.00 36.12 4.41
7702 9602 1.001378 ACGAAATTGTGCCAAGTCTGC 60.001 47.619 0.00 0.00 0.00 4.26
7703 9603 3.354089 AACGAAATTGTGCCAAGTCTG 57.646 42.857 0.00 0.00 0.00 3.51
7710 9610 3.636282 AGGTTGTAACGAAATTGTGCC 57.364 42.857 0.00 0.00 0.00 5.01
7720 9620 5.445010 GCGGATTTAGTACAAGGTTGTAACG 60.445 44.000 4.14 3.30 44.46 3.18
7722 9622 4.626604 CGCGGATTTAGTACAAGGTTGTAA 59.373 41.667 0.00 0.00 44.46 2.41
7728 9628 2.883574 TGTCGCGGATTTAGTACAAGG 58.116 47.619 6.13 0.00 0.00 3.61
7729 9629 5.464965 AATTGTCGCGGATTTAGTACAAG 57.535 39.130 6.13 0.00 31.09 3.16
7742 9642 3.064682 TCCAATCCACATTAATTGTCGCG 59.935 43.478 0.00 0.00 36.00 5.87
7761 9661 7.012515 TCACTAATTTAAAACACGAAAGCTCCA 59.987 33.333 0.00 0.00 0.00 3.86
7766 9666 9.878599 ACTCATCACTAATTTAAAACACGAAAG 57.121 29.630 0.00 0.00 0.00 2.62
7828 9742 3.181466 GGGCAAGGACAGAACACATTTTT 60.181 43.478 0.00 0.00 0.00 1.94
7829 9743 2.365293 GGGCAAGGACAGAACACATTTT 59.635 45.455 0.00 0.00 0.00 1.82
7830 9744 1.963515 GGGCAAGGACAGAACACATTT 59.036 47.619 0.00 0.00 0.00 2.32
7831 9745 1.620822 GGGCAAGGACAGAACACATT 58.379 50.000 0.00 0.00 0.00 2.71
7832 9746 0.251341 GGGGCAAGGACAGAACACAT 60.251 55.000 0.00 0.00 0.00 3.21
7833 9747 1.150536 GGGGCAAGGACAGAACACA 59.849 57.895 0.00 0.00 0.00 3.72
7834 9748 0.890996 CAGGGGCAAGGACAGAACAC 60.891 60.000 0.00 0.00 0.00 3.32
7835 9749 1.455849 CAGGGGCAAGGACAGAACA 59.544 57.895 0.00 0.00 0.00 3.18
7836 9750 1.303643 CCAGGGGCAAGGACAGAAC 60.304 63.158 0.00 0.00 0.00 3.01
7837 9751 1.774217 ACCAGGGGCAAGGACAGAA 60.774 57.895 0.00 0.00 0.00 3.02
7838 9752 2.121963 ACCAGGGGCAAGGACAGA 60.122 61.111 0.00 0.00 0.00 3.41
7839 9753 1.856539 ATCACCAGGGGCAAGGACAG 61.857 60.000 0.00 0.00 0.00 3.51
7840 9754 1.852157 ATCACCAGGGGCAAGGACA 60.852 57.895 0.00 0.00 0.00 4.02
7841 9755 1.379044 CATCACCAGGGGCAAGGAC 60.379 63.158 0.00 0.00 0.00 3.85
7842 9756 2.615465 CCATCACCAGGGGCAAGGA 61.615 63.158 0.00 0.00 0.00 3.36
7843 9757 2.043652 CCATCACCAGGGGCAAGG 60.044 66.667 0.00 0.00 0.00 3.61
7844 9758 1.679977 CACCATCACCAGGGGCAAG 60.680 63.158 0.00 0.00 0.00 4.01
7845 9759 2.424842 GACACCATCACCAGGGGCAA 62.425 60.000 0.00 0.00 30.69 4.52
7846 9760 2.858476 ACACCATCACCAGGGGCA 60.858 61.111 0.00 0.00 30.69 5.36
7847 9761 2.044946 GACACCATCACCAGGGGC 60.045 66.667 0.00 0.00 30.69 5.80
7848 9762 0.107017 GATGACACCATCACCAGGGG 60.107 60.000 0.00 0.00 46.48 4.79
7849 9763 3.483954 GATGACACCATCACCAGGG 57.516 57.895 0.00 0.00 46.48 4.45
7856 9770 1.098050 GCCACAAGGATGACACCATC 58.902 55.000 0.00 0.00 46.50 3.51
7857 9771 0.677731 CGCCACAAGGATGACACCAT 60.678 55.000 0.00 0.00 36.89 3.55
7858 9772 1.302431 CGCCACAAGGATGACACCA 60.302 57.895 0.00 0.00 36.89 4.17
7859 9773 1.302511 ACGCCACAAGGATGACACC 60.303 57.895 0.00 0.00 36.89 4.16
7860 9774 0.884704 ACACGCCACAAGGATGACAC 60.885 55.000 0.00 0.00 36.89 3.67
7861 9775 0.884259 CACACGCCACAAGGATGACA 60.884 55.000 0.00 0.00 36.89 3.58
7862 9776 1.577328 CCACACGCCACAAGGATGAC 61.577 60.000 0.00 0.00 36.89 3.06
7863 9777 1.302431 CCACACGCCACAAGGATGA 60.302 57.895 0.00 0.00 36.89 2.92
7864 9778 1.300971 CTCCACACGCCACAAGGATG 61.301 60.000 0.00 0.00 36.89 3.51
7865 9779 1.003355 CTCCACACGCCACAAGGAT 60.003 57.895 0.00 0.00 36.89 3.24
7866 9780 1.978455 AACTCCACACGCCACAAGGA 61.978 55.000 0.00 0.00 36.89 3.36
7867 9781 1.101049 AAACTCCACACGCCACAAGG 61.101 55.000 0.00 0.00 38.23 3.61
7868 9782 0.738389 AAAACTCCACACGCCACAAG 59.262 50.000 0.00 0.00 0.00 3.16
7869 9783 1.133407 GAAAAACTCCACACGCCACAA 59.867 47.619 0.00 0.00 0.00 3.33
7870 9784 0.736053 GAAAAACTCCACACGCCACA 59.264 50.000 0.00 0.00 0.00 4.17
7871 9785 0.030235 GGAAAAACTCCACACGCCAC 59.970 55.000 0.00 0.00 44.67 5.01
7872 9786 2.410466 GGAAAAACTCCACACGCCA 58.590 52.632 0.00 0.00 44.67 5.69
7880 9794 3.550233 GCCACGAAGAAAGGAAAAACTCC 60.550 47.826 0.00 0.00 45.81 3.85
7881 9795 3.066203 TGCCACGAAGAAAGGAAAAACTC 59.934 43.478 0.00 0.00 0.00 3.01
7882 9796 3.020984 TGCCACGAAGAAAGGAAAAACT 58.979 40.909 0.00 0.00 0.00 2.66
7883 9797 3.113322 GTGCCACGAAGAAAGGAAAAAC 58.887 45.455 0.00 0.00 0.00 2.43
7884 9798 2.100087 GGTGCCACGAAGAAAGGAAAAA 59.900 45.455 0.00 0.00 0.00 1.94
7885 9799 1.679153 GGTGCCACGAAGAAAGGAAAA 59.321 47.619 0.00 0.00 0.00 2.29
7886 9800 1.133915 AGGTGCCACGAAGAAAGGAAA 60.134 47.619 0.00 0.00 0.00 3.13
7887 9801 0.472471 AGGTGCCACGAAGAAAGGAA 59.528 50.000 0.00 0.00 0.00 3.36
7888 9802 0.472471 AAGGTGCCACGAAGAAAGGA 59.528 50.000 0.00 0.00 0.00 3.36
7889 9803 1.318576 AAAGGTGCCACGAAGAAAGG 58.681 50.000 0.00 0.00 0.00 3.11
7890 9804 3.436700 AAAAAGGTGCCACGAAGAAAG 57.563 42.857 0.00 0.00 0.00 2.62
7924 9838 9.642327 CTCAACACATTGATTAATGGAATGAAA 57.358 29.630 17.78 0.00 46.33 2.69
7925 9839 7.760794 GCTCAACACATTGATTAATGGAATGAA 59.239 33.333 17.78 0.00 46.33 2.57
7926 9840 7.093858 TGCTCAACACATTGATTAATGGAATGA 60.094 33.333 17.78 12.32 46.33 2.57
7927 9841 7.036829 TGCTCAACACATTGATTAATGGAATG 58.963 34.615 14.10 12.35 46.33 2.67
7928 9842 7.123098 TCTGCTCAACACATTGATTAATGGAAT 59.877 33.333 14.10 0.00 46.33 3.01
7929 9843 6.433716 TCTGCTCAACACATTGATTAATGGAA 59.566 34.615 14.10 0.00 46.33 3.53
7930 9844 5.945191 TCTGCTCAACACATTGATTAATGGA 59.055 36.000 14.10 1.85 46.33 3.41
7931 9845 6.198650 TCTGCTCAACACATTGATTAATGG 57.801 37.500 14.10 6.24 46.33 3.16
7932 9846 7.165318 CGATTCTGCTCAACACATTGATTAATG 59.835 37.037 8.57 8.57 43.92 1.90
7933 9847 7.148188 ACGATTCTGCTCAACACATTGATTAAT 60.148 33.333 0.00 0.00 43.92 1.40
7934 9848 6.149308 ACGATTCTGCTCAACACATTGATTAA 59.851 34.615 0.00 0.00 43.92 1.40
7935 9849 5.643348 ACGATTCTGCTCAACACATTGATTA 59.357 36.000 0.00 0.00 43.92 1.75
7936 9850 4.456911 ACGATTCTGCTCAACACATTGATT 59.543 37.500 0.00 0.00 43.92 2.57
7937 9851 4.005650 ACGATTCTGCTCAACACATTGAT 58.994 39.130 0.00 0.00 43.92 2.57
7938 9852 3.402110 ACGATTCTGCTCAACACATTGA 58.598 40.909 0.00 0.00 42.73 2.57
7939 9853 3.722957 CGACGATTCTGCTCAACACATTG 60.723 47.826 0.00 0.00 37.14 2.82
7940 9854 2.413112 CGACGATTCTGCTCAACACATT 59.587 45.455 0.00 0.00 0.00 2.71
7941 9855 1.995484 CGACGATTCTGCTCAACACAT 59.005 47.619 0.00 0.00 0.00 3.21
7942 9856 1.418373 CGACGATTCTGCTCAACACA 58.582 50.000 0.00 0.00 0.00 3.72
7943 9857 0.716108 CCGACGATTCTGCTCAACAC 59.284 55.000 0.00 0.00 0.00 3.32
7944 9858 1.014044 GCCGACGATTCTGCTCAACA 61.014 55.000 0.00 0.00 0.00 3.33
7945 9859 1.014044 TGCCGACGATTCTGCTCAAC 61.014 55.000 0.00 0.00 33.33 3.18
7946 9860 0.737367 CTGCCGACGATTCTGCTCAA 60.737 55.000 0.00 0.00 33.33 3.02
7947 9861 1.153765 CTGCCGACGATTCTGCTCA 60.154 57.895 0.00 0.00 33.33 4.26
7948 9862 3.698382 CTGCCGACGATTCTGCTC 58.302 61.111 0.00 0.00 33.33 4.26
8292 10206 3.819877 AATTATCGCCGGTCCGCCC 62.820 63.158 5.50 0.00 0.00 6.13
8293 10207 1.838568 GAAATTATCGCCGGTCCGCC 61.839 60.000 5.50 0.00 0.00 6.13
8294 10208 1.568025 GAAATTATCGCCGGTCCGC 59.432 57.895 5.50 0.23 0.00 5.54
8295 10209 1.850640 CGAAATTATCGCCGGTCCG 59.149 57.895 3.60 3.60 45.89 4.79
8304 10218 1.029681 GCCCCCACACCGAAATTATC 58.970 55.000 0.00 0.00 0.00 1.75
8305 10219 0.750182 CGCCCCCACACCGAAATTAT 60.750 55.000 0.00 0.00 0.00 1.28
8306 10220 1.377463 CGCCCCCACACCGAAATTA 60.377 57.895 0.00 0.00 0.00 1.40
8307 10221 2.493273 ATCGCCCCCACACCGAAATT 62.493 55.000 0.00 0.00 34.42 1.82
8308 10222 2.493273 AATCGCCCCCACACCGAAAT 62.493 55.000 0.00 0.00 34.42 2.17
8309 10223 3.198953 AATCGCCCCCACACCGAAA 62.199 57.895 0.00 0.00 34.42 3.46
8310 10224 3.642503 AATCGCCCCCACACCGAA 61.643 61.111 0.00 0.00 34.42 4.30
8311 10225 4.402528 CAATCGCCCCCACACCGA 62.403 66.667 0.00 0.00 35.29 4.69
8312 10226 4.715523 ACAATCGCCCCCACACCG 62.716 66.667 0.00 0.00 0.00 4.94
8313 10227 3.061848 CACAATCGCCCCCACACC 61.062 66.667 0.00 0.00 0.00 4.16
8314 10228 1.862602 GAACACAATCGCCCCCACAC 61.863 60.000 0.00 0.00 0.00 3.82
8315 10229 1.602323 GAACACAATCGCCCCCACA 60.602 57.895 0.00 0.00 0.00 4.17
8316 10230 2.340328 GGAACACAATCGCCCCCAC 61.340 63.158 0.00 0.00 0.00 4.61
8317 10231 2.034999 GGAACACAATCGCCCCCA 59.965 61.111 0.00 0.00 0.00 4.96
8318 10232 2.754254 GGGAACACAATCGCCCCC 60.754 66.667 0.00 0.00 34.39 5.40
8319 10233 2.034999 TGGGAACACAATCGCCCC 59.965 61.111 0.00 0.00 39.93 5.80
8320 10234 2.046285 CCTGGGAACACAATCGCCC 61.046 63.158 0.00 0.00 41.08 6.13
8321 10235 1.303317 ACCTGGGAACACAATCGCC 60.303 57.895 0.00 0.00 35.60 5.54
8322 10236 1.635663 CGACCTGGGAACACAATCGC 61.636 60.000 0.00 0.00 35.60 4.58
8323 10237 1.635663 GCGACCTGGGAACACAATCG 61.636 60.000 0.00 6.17 37.09 3.34
8324 10238 1.305930 GGCGACCTGGGAACACAATC 61.306 60.000 0.00 0.00 35.60 2.67
8325 10239 1.303317 GGCGACCTGGGAACACAAT 60.303 57.895 0.00 0.00 35.60 2.71
8326 10240 2.112297 GGCGACCTGGGAACACAA 59.888 61.111 0.00 0.00 35.60 3.33
8338 10252 2.502692 AAACAGCGTCTAGGGGCGAC 62.503 60.000 6.49 0.00 0.00 5.19
8339 10253 1.823169 AAAACAGCGTCTAGGGGCGA 61.823 55.000 6.49 0.00 0.00 5.54
8340 10254 0.953960 AAAAACAGCGTCTAGGGGCG 60.954 55.000 0.00 0.00 0.00 6.13
8341 10255 2.942641 AAAAACAGCGTCTAGGGGC 58.057 52.632 0.00 0.00 0.00 5.80
8356 10270 7.065803 TGTTTGGCCGATTTTATGTTTCAAAAA 59.934 29.630 0.00 0.00 0.00 1.94
8357 10271 6.538742 TGTTTGGCCGATTTTATGTTTCAAAA 59.461 30.769 0.00 0.00 0.00 2.44
8358 10272 6.018669 GTGTTTGGCCGATTTTATGTTTCAAA 60.019 34.615 0.00 0.00 0.00 2.69
8359 10273 5.463724 GTGTTTGGCCGATTTTATGTTTCAA 59.536 36.000 0.00 0.00 0.00 2.69
8360 10274 4.985409 GTGTTTGGCCGATTTTATGTTTCA 59.015 37.500 0.00 0.00 0.00 2.69
8361 10275 4.089351 CGTGTTTGGCCGATTTTATGTTTC 59.911 41.667 0.00 0.00 0.00 2.78
8362 10276 3.984633 CGTGTTTGGCCGATTTTATGTTT 59.015 39.130 0.00 0.00 0.00 2.83
8363 10277 3.253677 TCGTGTTTGGCCGATTTTATGTT 59.746 39.130 0.00 0.00 0.00 2.71
8364 10278 2.814919 TCGTGTTTGGCCGATTTTATGT 59.185 40.909 0.00 0.00 0.00 2.29
8365 10279 3.168193 GTCGTGTTTGGCCGATTTTATG 58.832 45.455 0.00 0.00 35.30 1.90
8366 10280 2.814919 TGTCGTGTTTGGCCGATTTTAT 59.185 40.909 0.00 0.00 35.30 1.40
8367 10281 2.031857 GTGTCGTGTTTGGCCGATTTTA 60.032 45.455 0.00 0.00 35.30 1.52
8368 10282 1.025812 TGTCGTGTTTGGCCGATTTT 58.974 45.000 0.00 0.00 35.30 1.82
8369 10283 0.309612 GTGTCGTGTTTGGCCGATTT 59.690 50.000 0.00 0.00 35.30 2.17
8370 10284 0.816018 TGTGTCGTGTTTGGCCGATT 60.816 50.000 0.00 0.00 35.30 3.34
8371 10285 0.816018 TTGTGTCGTGTTTGGCCGAT 60.816 50.000 0.00 0.00 35.30 4.18
8372 10286 1.025113 TTTGTGTCGTGTTTGGCCGA 61.025 50.000 0.00 0.00 0.00 5.54
8373 10287 0.030101 ATTTGTGTCGTGTTTGGCCG 59.970 50.000 0.00 0.00 0.00 6.13
8374 10288 2.124122 GAATTTGTGTCGTGTTTGGCC 58.876 47.619 0.00 0.00 0.00 5.36
8375 10289 1.778591 CGAATTTGTGTCGTGTTTGGC 59.221 47.619 0.00 0.00 33.80 4.52
8383 10297 3.602390 AGTTTGGACGAATTTGTGTCG 57.398 42.857 2.13 0.00 44.10 4.35
8384 10298 4.083484 CCCTAGTTTGGACGAATTTGTGTC 60.083 45.833 2.13 0.51 0.00 3.67
8385 10299 3.818773 CCCTAGTTTGGACGAATTTGTGT 59.181 43.478 2.13 0.00 0.00 3.72
8386 10300 3.190535 CCCCTAGTTTGGACGAATTTGTG 59.809 47.826 2.13 0.00 0.00 3.33
8387 10301 3.418047 CCCCTAGTTTGGACGAATTTGT 58.582 45.455 0.00 0.00 0.00 2.83
8388 10302 2.163613 GCCCCTAGTTTGGACGAATTTG 59.836 50.000 0.00 0.00 0.00 2.32
8389 10303 2.443416 GCCCCTAGTTTGGACGAATTT 58.557 47.619 0.00 0.00 0.00 1.82
8390 10304 1.677820 CGCCCCTAGTTTGGACGAATT 60.678 52.381 0.00 0.00 0.00 2.17
8391 10305 0.107848 CGCCCCTAGTTTGGACGAAT 60.108 55.000 0.00 0.00 0.00 3.34
8392 10306 1.186917 TCGCCCCTAGTTTGGACGAA 61.187 55.000 0.00 0.00 34.35 3.85
8393 10307 0.974010 ATCGCCCCTAGTTTGGACGA 60.974 55.000 0.00 0.00 38.87 4.20
8394 10308 0.107848 AATCGCCCCTAGTTTGGACG 60.108 55.000 0.00 0.00 0.00 4.79
8395 10309 2.014857 GAAATCGCCCCTAGTTTGGAC 58.985 52.381 0.00 0.00 0.00 4.02
8396 10310 1.631388 TGAAATCGCCCCTAGTTTGGA 59.369 47.619 0.00 0.00 0.00 3.53
8397 10311 2.122783 TGAAATCGCCCCTAGTTTGG 57.877 50.000 0.00 0.00 0.00 3.28
8398 10312 3.694072 TCAATGAAATCGCCCCTAGTTTG 59.306 43.478 0.00 0.00 0.00 2.93
8399 10313 3.963129 TCAATGAAATCGCCCCTAGTTT 58.037 40.909 0.00 0.00 0.00 2.66
8400 10314 3.644966 TCAATGAAATCGCCCCTAGTT 57.355 42.857 0.00 0.00 0.00 2.24
8401 10315 3.864789 ATCAATGAAATCGCCCCTAGT 57.135 42.857 0.00 0.00 0.00 2.57
8402 10316 6.207417 ACAAATATCAATGAAATCGCCCCTAG 59.793 38.462 0.00 0.00 0.00 3.02
8403 10317 6.068010 ACAAATATCAATGAAATCGCCCCTA 58.932 36.000 0.00 0.00 0.00 3.53
8404 10318 4.895297 ACAAATATCAATGAAATCGCCCCT 59.105 37.500 0.00 0.00 0.00 4.79
8405 10319 5.200368 ACAAATATCAATGAAATCGCCCC 57.800 39.130 0.00 0.00 0.00 5.80
8406 10320 6.734137 TGTACAAATATCAATGAAATCGCCC 58.266 36.000 0.00 0.00 0.00 6.13
8407 10321 8.627487 TTTGTACAAATATCAATGAAATCGCC 57.373 30.769 17.01 0.00 0.00 5.54
8452 10366 8.588789 GCATAGTCGTTTTTAGTTTGTGTTTTT 58.411 29.630 0.00 0.00 0.00 1.94
8453 10367 7.221259 GGCATAGTCGTTTTTAGTTTGTGTTTT 59.779 33.333 0.00 0.00 0.00 2.43
8454 10368 6.693978 GGCATAGTCGTTTTTAGTTTGTGTTT 59.306 34.615 0.00 0.00 0.00 2.83
8455 10369 6.203647 GGCATAGTCGTTTTTAGTTTGTGTT 58.796 36.000 0.00 0.00 0.00 3.32
8456 10370 5.278120 GGGCATAGTCGTTTTTAGTTTGTGT 60.278 40.000 0.00 0.00 0.00 3.72
8457 10371 5.151389 GGGCATAGTCGTTTTTAGTTTGTG 58.849 41.667 0.00 0.00 0.00 3.33
8458 10372 4.822896 TGGGCATAGTCGTTTTTAGTTTGT 59.177 37.500 0.00 0.00 0.00 2.83
8459 10373 5.365403 TGGGCATAGTCGTTTTTAGTTTG 57.635 39.130 0.00 0.00 0.00 2.93
8460 10374 4.082949 GCTGGGCATAGTCGTTTTTAGTTT 60.083 41.667 0.00 0.00 0.00 2.66
8461 10375 3.439129 GCTGGGCATAGTCGTTTTTAGTT 59.561 43.478 0.00 0.00 0.00 2.24
8462 10376 3.007635 GCTGGGCATAGTCGTTTTTAGT 58.992 45.455 0.00 0.00 0.00 2.24
8463 10377 2.354821 GGCTGGGCATAGTCGTTTTTAG 59.645 50.000 0.00 0.00 0.00 1.85
8464 10378 2.290387 TGGCTGGGCATAGTCGTTTTTA 60.290 45.455 0.00 0.00 0.00 1.52
8465 10379 1.173913 GGCTGGGCATAGTCGTTTTT 58.826 50.000 0.00 0.00 0.00 1.94
8466 10380 0.037590 TGGCTGGGCATAGTCGTTTT 59.962 50.000 0.00 0.00 0.00 2.43
8467 10381 0.676782 GTGGCTGGGCATAGTCGTTT 60.677 55.000 0.00 0.00 0.00 3.60
8468 10382 1.078426 GTGGCTGGGCATAGTCGTT 60.078 57.895 0.00 0.00 0.00 3.85
8469 10383 2.584608 GTGGCTGGGCATAGTCGT 59.415 61.111 0.00 0.00 0.00 4.34
8470 10384 2.203070 GGTGGCTGGGCATAGTCG 60.203 66.667 0.00 0.00 0.00 4.18
8471 10385 2.203070 CGGTGGCTGGGCATAGTC 60.203 66.667 0.00 0.00 0.00 2.59
8472 10386 4.489771 GCGGTGGCTGGGCATAGT 62.490 66.667 0.00 0.00 35.83 2.12
8491 10405 1.604185 GGCATGTAGATGGCGAGAGAC 60.604 57.143 10.76 0.00 44.46 3.36
8492 10406 0.676184 GGCATGTAGATGGCGAGAGA 59.324 55.000 10.76 0.00 44.46 3.10
8493 10407 3.207677 GGCATGTAGATGGCGAGAG 57.792 57.895 10.76 0.00 44.46 3.20
8499 10413 0.320247 GCTCCTCGGCATGTAGATGG 60.320 60.000 1.57 0.00 0.00 3.51
8500 10414 0.320247 GGCTCCTCGGCATGTAGATG 60.320 60.000 0.00 0.00 38.25 2.90
8501 10415 0.470833 AGGCTCCTCGGCATGTAGAT 60.471 55.000 0.00 0.00 41.46 1.98
8502 10416 1.075970 AGGCTCCTCGGCATGTAGA 60.076 57.895 0.00 0.00 41.46 2.59
8503 10417 1.068753 CAGGCTCCTCGGCATGTAG 59.931 63.158 0.00 0.00 38.88 2.74
8504 10418 3.220222 CAGGCTCCTCGGCATGTA 58.780 61.111 0.00 0.00 38.88 2.29
8507 10421 0.687757 TTCTACAGGCTCCTCGGCAT 60.688 55.000 0.00 0.00 41.46 4.40
8508 10422 1.304962 TTCTACAGGCTCCTCGGCA 60.305 57.895 0.00 0.00 41.46 5.69
8509 10423 1.142097 GTTCTACAGGCTCCTCGGC 59.858 63.158 0.00 0.00 38.75 5.54
8510 10424 1.817209 GGTTCTACAGGCTCCTCGG 59.183 63.158 0.00 0.00 0.00 4.63
8511 10425 1.433879 CGGTTCTACAGGCTCCTCG 59.566 63.158 0.00 0.00 0.00 4.63
8512 10426 1.677637 CCCGGTTCTACAGGCTCCTC 61.678 65.000 0.00 0.00 31.76 3.71
8513 10427 1.686110 CCCGGTTCTACAGGCTCCT 60.686 63.158 0.00 0.00 31.76 3.69
8514 10428 1.988406 ACCCGGTTCTACAGGCTCC 60.988 63.158 0.00 0.00 31.76 4.70
8515 10429 1.218316 CACCCGGTTCTACAGGCTC 59.782 63.158 0.00 0.00 31.76 4.70
8516 10430 0.251922 TACACCCGGTTCTACAGGCT 60.252 55.000 0.00 0.00 31.76 4.58
8517 10431 0.175073 CTACACCCGGTTCTACAGGC 59.825 60.000 0.00 0.00 31.76 4.85
8518 10432 1.475682 GACTACACCCGGTTCTACAGG 59.524 57.143 0.00 0.00 32.98 4.00
8519 10433 1.131883 CGACTACACCCGGTTCTACAG 59.868 57.143 0.00 0.00 0.00 2.74
8520 10434 1.167851 CGACTACACCCGGTTCTACA 58.832 55.000 0.00 0.00 0.00 2.74
8521 10435 0.179153 GCGACTACACCCGGTTCTAC 60.179 60.000 0.00 0.00 0.00 2.59
8522 10436 1.315257 GGCGACTACACCCGGTTCTA 61.315 60.000 0.00 0.00 0.00 2.10
8523 10437 2.643232 GGCGACTACACCCGGTTCT 61.643 63.158 0.00 0.00 0.00 3.01
8524 10438 2.125793 GGCGACTACACCCGGTTC 60.126 66.667 0.00 0.00 0.00 3.62
8525 10439 4.060038 CGGCGACTACACCCGGTT 62.060 66.667 0.00 0.00 38.42 4.44
8545 10459 1.226575 TGACGATGATGACGGCGAC 60.227 57.895 16.62 8.59 42.10 5.19
8546 10460 1.226575 GTGACGATGATGACGGCGA 60.227 57.895 16.62 0.00 42.10 5.54
8547 10461 2.230940 GGTGACGATGATGACGGCG 61.231 63.158 4.80 4.80 42.10 6.46
8548 10462 3.706140 GGTGACGATGATGACGGC 58.294 61.111 0.00 0.00 39.41 5.68
8579 10493 4.697756 TTGGAGCAAGGACGGCGG 62.698 66.667 13.24 0.00 36.08 6.13
8580 10494 3.423154 GTTGGAGCAAGGACGGCG 61.423 66.667 4.80 4.80 36.08 6.46
8581 10495 3.056328 GGTTGGAGCAAGGACGGC 61.056 66.667 0.00 0.00 0.00 5.68
8582 10496 2.359975 GGGTTGGAGCAAGGACGG 60.360 66.667 0.00 0.00 0.00 4.79
8583 10497 1.672356 CAGGGTTGGAGCAAGGACG 60.672 63.158 0.00 0.00 0.00 4.79
8584 10498 0.606673 GTCAGGGTTGGAGCAAGGAC 60.607 60.000 0.00 0.00 0.00 3.85
8585 10499 1.761174 GTCAGGGTTGGAGCAAGGA 59.239 57.895 0.00 0.00 0.00 3.36
8586 10500 1.303643 GGTCAGGGTTGGAGCAAGG 60.304 63.158 0.00 0.00 33.16 3.61
8587 10501 0.607489 CTGGTCAGGGTTGGAGCAAG 60.607 60.000 0.00 0.00 41.66 4.01
8588 10502 1.455849 CTGGTCAGGGTTGGAGCAA 59.544 57.895 0.00 0.00 41.66 3.91
8589 10503 3.160585 CTGGTCAGGGTTGGAGCA 58.839 61.111 0.00 0.00 40.16 4.26
8590 10504 2.360475 GCTGGTCAGGGTTGGAGC 60.360 66.667 0.00 0.00 0.00 4.70
8591 10505 2.046892 CGCTGGTCAGGGTTGGAG 60.047 66.667 6.84 0.00 36.72 3.86
8635 10549 4.933064 GACGAGGATGCGCCCGAG 62.933 72.222 4.18 1.84 37.37 4.63
8641 10555 4.538283 AGCGACGACGAGGATGCG 62.538 66.667 12.29 0.00 42.66 4.73
8642 10556 2.951745 CAGCGACGACGAGGATGC 60.952 66.667 12.29 0.00 42.66 3.91
8643 10557 1.583967 GACAGCGACGACGAGGATG 60.584 63.158 12.29 4.14 42.66 3.51
8644 10558 2.792599 GACAGCGACGACGAGGAT 59.207 61.111 12.29 0.00 42.66 3.24
8645 10559 3.785499 CGACAGCGACGACGAGGA 61.785 66.667 12.29 0.00 42.66 3.71
8646 10560 3.703939 CTCGACAGCGACGACGAGG 62.704 68.421 12.29 4.25 45.22 4.63
8647 10561 2.276120 CTCGACAGCGACGACGAG 60.276 66.667 12.29 15.19 42.51 4.18
8648 10562 3.785499 CCTCGACAGCGACGACGA 61.785 66.667 12.29 2.97 42.51 4.20
8649 10563 3.785499 TCCTCGACAGCGACGACG 61.785 66.667 2.12 2.12 42.51 5.12
8650 10564 2.202324 GTCCTCGACAGCGACGAC 60.202 66.667 0.00 0.00 42.51 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.