Multiple sequence alignment - TraesCS2D01G423800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G423800 chr2D 100.000 4151 0 0 1 4151 536926666 536922516 0.000000e+00 7666.0
1 TraesCS2D01G423800 chr2D 90.096 626 46 12 2238 2855 536923812 536924429 0.000000e+00 798.0
2 TraesCS2D01G423800 chr2D 86.634 202 25 2 1991 2191 69541105 69540905 5.400000e-54 222.0
3 TraesCS2D01G423800 chr2D 94.737 114 6 0 2460 2573 536924094 536924207 1.190000e-40 178.0
4 TraesCS2D01G423800 chr2D 98.333 60 1 0 2514 2573 536924094 536924035 5.680000e-19 106.0
5 TraesCS2D01G423800 chr2D 81.609 87 12 4 2270 2354 2779780 2779696 7.450000e-08 69.4
6 TraesCS2D01G423800 chr2A 94.715 1722 58 13 775 2491 679516332 679514639 0.000000e+00 2645.0
7 TraesCS2D01G423800 chr2A 94.943 613 26 4 2816 3426 679514443 679513834 0.000000e+00 955.0
8 TraesCS2D01G423800 chr2A 91.016 256 18 3 2601 2855 679514639 679514890 1.430000e-89 340.0
9 TraesCS2D01G423800 chr2A 91.304 230 5 7 3927 4151 679513437 679513218 2.430000e-77 300.0
10 TraesCS2D01G423800 chr2A 84.000 225 34 1 375 597 748178335 748178111 9.040000e-52 215.0
11 TraesCS2D01G423800 chr2A 84.360 211 31 1 389 597 748196559 748196349 5.440000e-49 206.0
12 TraesCS2D01G423800 chr2A 83.333 216 33 2 375 588 748131336 748131122 3.270000e-46 196.0
13 TraesCS2D01G423800 chr2A 77.489 231 13 13 3602 3816 679513701 679513494 7.340000e-18 102.0
14 TraesCS2D01G423800 chr2A 88.732 71 6 2 1927 1995 679514394 679514324 7.390000e-13 86.1
15 TraesCS2D01G423800 chr2B 82.860 1161 114 40 830 1947 638974378 638973260 0.000000e+00 963.0
16 TraesCS2D01G423800 chr2B 88.552 594 45 15 2852 3440 638973291 638972716 0.000000e+00 699.0
17 TraesCS2D01G423800 chr2B 90.126 557 20 12 3627 4151 638972581 638972028 0.000000e+00 691.0
18 TraesCS2D01G423800 chr2B 93.281 253 14 3 2255 2504 694890503 694890755 1.820000e-98 370.0
19 TraesCS2D01G423800 chr2B 92.157 255 14 5 2588 2838 694890755 694890503 5.100000e-94 355.0
20 TraesCS2D01G423800 chr2B 95.833 96 4 0 279 374 785216431 785216336 5.560000e-34 156.0
21 TraesCS2D01G423800 chr2B 91.837 49 3 1 2526 2573 36423684 36423732 2.680000e-07 67.6
22 TraesCS2D01G423800 chr1B 94.810 289 15 0 1 289 174979665 174979953 6.330000e-123 451.0
23 TraesCS2D01G423800 chr1B 94.118 289 11 2 1 289 174961186 174961468 6.370000e-118 435.0
24 TraesCS2D01G423800 chr1B 92.520 254 13 6 2255 2504 119296746 119296495 3.950000e-95 359.0
25 TraesCS2D01G423800 chr1B 92.578 256 10 8 2588 2838 119296495 119296746 3.950000e-95 359.0
26 TraesCS2D01G423800 chr1B 92.095 253 20 0 2255 2507 142799379 142799127 1.420000e-94 357.0
27 TraesCS2D01G423800 chr1B 91.765 255 18 3 2585 2838 142799127 142799379 6.600000e-93 351.0
28 TraesCS2D01G423800 chr1B 93.151 219 13 1 372 588 174961467 174961685 1.860000e-83 320.0
29 TraesCS2D01G423800 chr1B 92.627 217 13 3 2280 2494 119317494 119317279 4.030000e-80 309.0
30 TraesCS2D01G423800 chr1B 92.237 219 11 5 2598 2813 119317279 119317494 5.210000e-79 305.0
31 TraesCS2D01G423800 chr1B 91.781 219 16 1 372 588 174979952 174980170 1.880000e-78 303.0
32 TraesCS2D01G423800 chr1B 91.667 48 4 0 2526 2573 142799127 142799174 2.680000e-07 67.6
33 TraesCS2D01G423800 chr1B 93.333 45 3 0 2529 2573 142831523 142831567 2.680000e-07 67.6
34 TraesCS2D01G423800 chr5B 93.701 254 14 2 2255 2506 122293039 122292786 3.030000e-101 379.0
35 TraesCS2D01G423800 chr5B 92.969 256 13 4 2586 2838 122292786 122293039 6.560000e-98 368.0
36 TraesCS2D01G423800 chr5B 91.406 256 15 4 2588 2838 541306490 541306743 1.100000e-90 344.0
37 TraesCS2D01G423800 chr5B 90.551 254 20 2 2255 2504 541306743 541306490 2.390000e-87 333.0
38 TraesCS2D01G423800 chr5B 91.667 84 3 1 589 672 639651109 639651030 3.390000e-21 113.0
39 TraesCS2D01G423800 chr5B 92.593 81 2 1 589 669 703849989 703849913 3.390000e-21 113.0
40 TraesCS2D01G423800 chr5B 87.629 97 5 5 589 685 303918977 303918888 5.680000e-19 106.0
41 TraesCS2D01G423800 chr5B 93.478 46 2 1 2529 2573 122300808 122300853 2.680000e-07 67.6
42 TraesCS2D01G423800 chr3D 91.406 256 15 4 2588 2838 380955958 380956211 1.100000e-90 344.0
43 TraesCS2D01G423800 chr3D 90.551 254 20 2 2255 2504 380956211 380955958 2.390000e-87 333.0
44 TraesCS2D01G423800 chr3D 88.350 206 24 0 1988 2193 317203599 317203394 8.910000e-62 248.0
45 TraesCS2D01G423800 chr3D 92.045 176 12 1 2329 2504 380961124 380960951 3.200000e-61 246.0
46 TraesCS2D01G423800 chr3D 91.573 178 10 2 2588 2764 380960951 380961124 1.490000e-59 241.0
47 TraesCS2D01G423800 chr3D 89.189 74 6 2 2262 2334 597669925 597669997 1.590000e-14 91.6
48 TraesCS2D01G423800 chr3D 93.333 45 3 0 2529 2573 380955958 380956002 2.680000e-07 67.6
49 TraesCS2D01G423800 chr4A 90.417 240 21 2 2255 2492 443377175 443377414 8.660000e-82 315.0
50 TraesCS2D01G423800 chr4A 90.083 242 19 4 2600 2838 443377414 443377175 4.030000e-80 309.0
51 TraesCS2D01G423800 chr4A 87.845 181 16 5 2588 2765 443369441 443369264 1.510000e-49 207.0
52 TraesCS2D01G423800 chr4A 91.566 83 3 3 589 671 655516895 655516973 1.220000e-20 111.0
53 TraesCS2D01G423800 chr7B 91.342 231 14 4 2588 2814 742522946 742522718 1.120000e-80 311.0
54 TraesCS2D01G423800 chr7B 89.202 213 20 3 375 586 316403982 316403772 3.180000e-66 263.0
55 TraesCS2D01G423800 chr7B 91.379 116 9 1 171 286 316404182 316404068 1.540000e-34 158.0
56 TraesCS2D01G423800 chr7B 81.609 174 25 6 418 588 229091673 229091842 2.010000e-28 137.0
57 TraesCS2D01G423800 chr5D 88.302 265 20 6 2256 2517 310286630 310286374 1.450000e-79 307.0
58 TraesCS2D01G423800 chr5D 87.747 253 19 6 2588 2837 310286387 310286630 6.790000e-73 285.0
59 TraesCS2D01G423800 chr5D 89.474 114 11 1 261 374 540271258 540271146 4.330000e-30 143.0
60 TraesCS2D01G423800 chr5D 77.578 223 38 10 2606 2820 509681836 509682054 1.570000e-24 124.0
61 TraesCS2D01G423800 chr5D 90.476 63 6 0 2272 2334 267840041 267840103 2.660000e-12 84.2
62 TraesCS2D01G423800 chr4D 89.540 239 17 5 2255 2492 126737709 126737478 3.140000e-76 296.0
63 TraesCS2D01G423800 chr4D 89.212 241 15 8 2600 2838 126737478 126737709 1.460000e-74 291.0
64 TraesCS2D01G423800 chr4D 93.421 152 8 1 2354 2503 19971677 19971526 1.500000e-54 224.0
65 TraesCS2D01G423800 chr4D 93.421 152 9 1 2589 2739 19971526 19971677 1.500000e-54 224.0
66 TraesCS2D01G423800 chr4D 90.968 155 13 1 2328 2481 126758290 126758136 1.510000e-49 207.0
67 TraesCS2D01G423800 chr4D 92.806 139 6 1 2588 2722 19975428 19975566 9.100000e-47 198.0
68 TraesCS2D01G423800 chr4D 89.809 157 12 3 2611 2765 126758136 126758290 9.100000e-47 198.0
69 TraesCS2D01G423800 chr4D 93.458 107 3 4 270 373 164649436 164649541 5.560000e-34 156.0
70 TraesCS2D01G423800 chr4D 100.000 44 0 0 2530 2573 19971526 19971569 9.560000e-12 82.4
71 TraesCS2D01G423800 chr4D 97.778 45 1 0 2529 2573 19975428 19975472 1.240000e-10 78.7
72 TraesCS2D01G423800 chr4D 95.238 42 2 0 2793 2834 19971979 19972020 2.680000e-07 67.6
73 TraesCS2D01G423800 chr4D 86.441 59 8 0 2262 2320 490009399 490009457 9.630000e-07 65.8
74 TraesCS2D01G423800 chr4B 87.712 236 19 8 2607 2838 520517105 520516876 2.460000e-67 267.0
75 TraesCS2D01G423800 chr4B 80.921 152 27 2 398 548 21154219 21154069 7.290000e-23 119.0
76 TraesCS2D01G423800 chr6B 93.296 179 10 2 2588 2764 34044307 34044485 3.180000e-66 263.0
77 TraesCS2D01G423800 chr6B 92.737 179 10 2 2329 2504 34044485 34044307 5.330000e-64 255.0
78 TraesCS2D01G423800 chr6B 88.557 201 22 1 1993 2193 347751043 347750844 4.150000e-60 243.0
79 TraesCS2D01G423800 chr6B 86.473 207 26 2 1987 2193 424243303 424243507 4.180000e-55 226.0
80 TraesCS2D01G423800 chr6B 98.864 88 1 0 288 375 220324950 220324863 1.540000e-34 158.0
81 TraesCS2D01G423800 chr6B 94.000 100 6 0 275 374 156139294 156139195 7.190000e-33 152.0
82 TraesCS2D01G423800 chr6B 89.362 94 5 2 589 682 119823530 119823618 3.390000e-21 113.0
83 TraesCS2D01G423800 chr6B 90.588 85 4 3 589 673 702221808 702221888 4.390000e-20 110.0
84 TraesCS2D01G423800 chr6B 93.478 46 2 1 2529 2573 34044307 34044352 2.680000e-07 67.6
85 TraesCS2D01G423800 chr1D 92.350 183 13 1 2255 2436 298094058 298093876 4.120000e-65 259.0
86 TraesCS2D01G423800 chr1D 92.350 183 12 2 2658 2838 298093876 298094058 4.120000e-65 259.0
87 TraesCS2D01G423800 chr1D 89.119 193 20 1 375 567 44653412 44653221 5.360000e-59 239.0
88 TraesCS2D01G423800 chr1D 88.202 178 18 3 2329 2504 298130365 298130189 4.210000e-50 209.0
89 TraesCS2D01G423800 chr1D 92.063 126 10 0 2367 2492 428167646 428167771 1.190000e-40 178.0
90 TraesCS2D01G423800 chr1D 89.796 98 8 1 2605 2702 298094792 298094887 1.570000e-24 124.0
91 TraesCS2D01G423800 chr6A 92.135 178 12 2 2329 2504 615575608 615575785 2.480000e-62 250.0
92 TraesCS2D01G423800 chr6A 91.667 180 10 4 2588 2764 615575785 615575608 1.150000e-60 244.0
93 TraesCS2D01G423800 chr6A 91.304 46 3 1 2529 2573 615575785 615575740 1.250000e-05 62.1
94 TraesCS2D01G423800 chr6D 92.090 177 13 1 2329 2504 58061906 58062082 8.910000e-62 248.0
95 TraesCS2D01G423800 chr6D 91.515 165 13 1 2329 2492 15743115 15742951 4.180000e-55 226.0
96 TraesCS2D01G423800 chr6D 90.426 94 7 2 2412 2504 15719876 15719784 5.640000e-24 122.0
97 TraesCS2D01G423800 chr6D 96.923 65 2 0 2774 2838 15721625 15721689 4.390000e-20 110.0
98 TraesCS2D01G423800 chr7D 87.500 208 25 1 1991 2197 329047509 329047302 5.360000e-59 239.0
99 TraesCS2D01G423800 chr7D 85.882 170 17 6 2600 2765 276929801 276929635 1.530000e-39 174.0
100 TraesCS2D01G423800 chr7D 87.302 63 5 2 2763 2822 155750545 155750607 7.450000e-08 69.4
101 TraesCS2D01G423800 chr7A 87.000 200 26 0 1987 2186 5650874 5651073 4.180000e-55 226.0
102 TraesCS2D01G423800 chr7A 86.341 205 25 2 1988 2192 504221348 504221549 1.940000e-53 220.0
103 TraesCS2D01G423800 chr5A 87.629 194 23 1 1991 2183 536817991 536818184 1.500000e-54 224.0
104 TraesCS2D01G423800 chrUn 98.901 91 1 0 287 377 37289164 37289254 3.320000e-36 163.0
105 TraesCS2D01G423800 chrUn 98.901 91 1 0 287 377 37292340 37292430 3.320000e-36 163.0
106 TraesCS2D01G423800 chr3A 91.892 111 5 4 265 373 77798610 77798502 7.190000e-33 152.0
107 TraesCS2D01G423800 chr3B 94.000 100 5 1 276 374 683392061 683391962 2.590000e-32 150.0
108 TraesCS2D01G423800 chr3B 92.683 82 2 1 589 670 16915089 16915012 9.430000e-22 115.0
109 TraesCS2D01G423800 chr3B 92.593 81 2 1 589 669 650613905 650613829 3.390000e-21 113.0
110 TraesCS2D01G423800 chr3B 90.000 90 3 5 588 675 49869934 49870019 1.220000e-20 111.0
111 TraesCS2D01G423800 chr1A 80.000 125 20 4 2608 2730 252479214 252479335 2.060000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G423800 chr2D 536922516 536926666 4150 True 3886.000000 7666 99.166500 1 4151 2 chr2D.!!$R3 4150
1 TraesCS2D01G423800 chr2D 536923812 536924429 617 False 488.000000 798 92.416500 2238 2855 2 chr2D.!!$F1 617
2 TraesCS2D01G423800 chr2A 679513218 679516332 3114 True 817.620000 2645 89.436600 775 4151 5 chr2A.!!$R4 3376
3 TraesCS2D01G423800 chr2B 638972028 638974378 2350 True 784.333333 963 87.179333 830 4151 3 chr2B.!!$R3 3321
4 TraesCS2D01G423800 chr1B 174979665 174980170 505 False 377.000000 451 93.295500 1 588 2 chr1B.!!$F6 587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
449 450 0.036164 TGTTACGCCTGGTCAGCATT 59.964 50.0 0.00 0.00 0.00 3.56 F
571 572 0.165944 CTCGCCAAGCTTAAACACCG 59.834 55.0 0.00 0.00 0.00 4.94 F
1673 1732 0.178068 TATCAAGCCTTGACCCTCGC 59.822 55.0 9.77 0.00 43.48 5.03 F
2534 2661 0.315886 TTCACGTGCACGGTGTAGAT 59.684 50.0 39.21 17.03 44.95 1.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2260 2326 0.524862 TCCTCAAAGGTAGACGTCGC 59.475 55.0 10.46 7.27 36.53 5.19 R
2570 2697 0.249531 ACACCGTGCACGTGAACATA 60.250 50.0 34.81 0.29 37.74 2.29 R
2571 2698 0.249531 TACACCGTGCACGTGAACAT 60.250 50.0 34.81 18.93 37.74 2.71 R
3553 3739 0.308376 GGCGTAACCTCGTTTTGCAA 59.692 50.0 0.00 0.00 34.51 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 1.737838 TGTTTTAGCCCATGAGAGCG 58.262 50.000 0.00 0.00 0.00 5.03
78 79 1.948611 GCCCATGAGAGCGGTTTGTTA 60.949 52.381 0.00 0.00 0.00 2.41
105 106 7.857456 TGACAAAAAGAATAGCTATCCCAGTA 58.143 34.615 6.72 0.00 0.00 2.74
188 189 1.202604 ACCAAACACTGTCGTGGTAGG 60.203 52.381 13.48 4.05 41.06 3.18
236 237 3.004849 TGGCATTAGGCAGTTCGAATCC 61.005 50.000 0.00 3.48 46.46 3.01
238 239 2.746472 GCATTAGGCAGTTCGAATCCCT 60.746 50.000 15.50 15.50 43.97 4.20
239 240 2.981859 TTAGGCAGTTCGAATCCCTC 57.018 50.000 14.86 0.00 0.00 4.30
242 243 0.462759 GGCAGTTCGAATCCCTCAGG 60.463 60.000 0.00 0.00 0.00 3.86
290 291 9.740710 ATTAAACTTGCTCTGTTTCCTAATACT 57.259 29.630 5.78 0.00 38.41 2.12
291 292 7.674471 AAACTTGCTCTGTTTCCTAATACTC 57.326 36.000 0.00 0.00 32.91 2.59
292 293 5.735766 ACTTGCTCTGTTTCCTAATACTCC 58.264 41.667 0.00 0.00 0.00 3.85
293 294 4.755266 TGCTCTGTTTCCTAATACTCCC 57.245 45.455 0.00 0.00 0.00 4.30
294 295 4.362677 TGCTCTGTTTCCTAATACTCCCT 58.637 43.478 0.00 0.00 0.00 4.20
295 296 4.406003 TGCTCTGTTTCCTAATACTCCCTC 59.594 45.833 0.00 0.00 0.00 4.30
296 297 4.202274 GCTCTGTTTCCTAATACTCCCTCC 60.202 50.000 0.00 0.00 0.00 4.30
297 298 3.958798 TCTGTTTCCTAATACTCCCTCCG 59.041 47.826 0.00 0.00 0.00 4.63
298 299 3.705072 CTGTTTCCTAATACTCCCTCCGT 59.295 47.826 0.00 0.00 0.00 4.69
299 300 4.098894 TGTTTCCTAATACTCCCTCCGTT 58.901 43.478 0.00 0.00 0.00 4.44
300 301 4.161001 TGTTTCCTAATACTCCCTCCGTTC 59.839 45.833 0.00 0.00 0.00 3.95
301 302 2.954792 TCCTAATACTCCCTCCGTTCC 58.045 52.381 0.00 0.00 0.00 3.62
302 303 2.245546 TCCTAATACTCCCTCCGTTCCA 59.754 50.000 0.00 0.00 0.00 3.53
303 304 3.036091 CCTAATACTCCCTCCGTTCCAA 58.964 50.000 0.00 0.00 0.00 3.53
304 305 3.453353 CCTAATACTCCCTCCGTTCCAAA 59.547 47.826 0.00 0.00 0.00 3.28
305 306 4.080751 CCTAATACTCCCTCCGTTCCAAAA 60.081 45.833 0.00 0.00 0.00 2.44
306 307 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
307 308 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
308 309 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
309 310 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
310 311 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
311 312 4.227527 ACTCCCTCCGTTCCAAAATAGATT 59.772 41.667 0.00 0.00 0.00 2.40
312 313 5.427481 ACTCCCTCCGTTCCAAAATAGATTA 59.573 40.000 0.00 0.00 0.00 1.75
313 314 5.677567 TCCCTCCGTTCCAAAATAGATTAC 58.322 41.667 0.00 0.00 0.00 1.89
314 315 5.427481 TCCCTCCGTTCCAAAATAGATTACT 59.573 40.000 0.00 0.00 0.00 2.24
315 316 5.758784 CCCTCCGTTCCAAAATAGATTACTC 59.241 44.000 0.00 0.00 0.00 2.59
316 317 6.346096 CCTCCGTTCCAAAATAGATTACTCA 58.654 40.000 0.00 0.00 0.00 3.41
317 318 6.821665 CCTCCGTTCCAAAATAGATTACTCAA 59.178 38.462 0.00 0.00 0.00 3.02
318 319 7.201617 CCTCCGTTCCAAAATAGATTACTCAAC 60.202 40.741 0.00 0.00 0.00 3.18
319 320 7.391620 TCCGTTCCAAAATAGATTACTCAACT 58.608 34.615 0.00 0.00 0.00 3.16
320 321 7.881232 TCCGTTCCAAAATAGATTACTCAACTT 59.119 33.333 0.00 0.00 0.00 2.66
321 322 8.512138 CCGTTCCAAAATAGATTACTCAACTTT 58.488 33.333 0.00 0.00 0.00 2.66
322 323 9.329913 CGTTCCAAAATAGATTACTCAACTTTG 57.670 33.333 0.00 0.00 0.00 2.77
359 360 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
360 361 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
361 362 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
362 363 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
363 364 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
364 365 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
365 366 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
366 367 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
367 368 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
368 369 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
369 370 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
370 371 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
383 384 2.279517 GGGAGTAGATGCCACGCG 60.280 66.667 3.53 3.53 39.77 6.01
385 386 2.962253 GAGTAGATGCCACGCGCC 60.962 66.667 5.73 0.00 36.24 6.53
387 388 2.962253 GTAGATGCCACGCGCCTC 60.962 66.667 5.73 0.00 36.24 4.70
401 402 3.051210 CCTCGTCTGCACAGTCCA 58.949 61.111 0.00 0.00 0.00 4.02
449 450 0.036164 TGTTACGCCTGGTCAGCATT 59.964 50.000 0.00 0.00 0.00 3.56
492 493 1.058748 CACCGTATTTGCACGCTCG 59.941 57.895 0.00 0.00 40.59 5.03
499 500 1.514678 ATTTGCACGCTCGAGCCAAA 61.515 50.000 29.69 29.69 35.40 3.28
511 512 3.215151 TCGAGCCAAATTGTAACACCAA 58.785 40.909 0.00 0.00 0.00 3.67
561 562 2.997485 AGTGATTTTTCTCGCCAAGC 57.003 45.000 0.00 0.00 0.00 4.01
571 572 0.165944 CTCGCCAAGCTTAAACACCG 59.834 55.000 0.00 0.00 0.00 4.94
588 591 1.695242 ACCGGTGGTGTAATTGACTCA 59.305 47.619 6.12 0.00 32.98 3.41
589 592 2.105134 ACCGGTGGTGTAATTGACTCAA 59.895 45.455 6.12 0.00 32.98 3.02
590 593 3.244770 ACCGGTGGTGTAATTGACTCAAT 60.245 43.478 6.12 0.00 32.66 2.57
591 594 3.756434 CCGGTGGTGTAATTGACTCAATT 59.244 43.478 18.76 18.76 44.74 2.32
592 595 4.217550 CCGGTGGTGTAATTGACTCAATTT 59.782 41.667 19.72 6.91 40.60 1.82
593 596 5.278758 CCGGTGGTGTAATTGACTCAATTTT 60.279 40.000 19.72 3.07 40.60 1.82
594 597 6.212955 CGGTGGTGTAATTGACTCAATTTTT 58.787 36.000 19.72 2.42 40.60 1.94
595 598 7.364200 CGGTGGTGTAATTGACTCAATTTTTA 58.636 34.615 19.72 6.62 40.60 1.52
596 599 8.026607 CGGTGGTGTAATTGACTCAATTTTTAT 58.973 33.333 19.72 0.98 40.60 1.40
597 600 9.705290 GGTGGTGTAATTGACTCAATTTTTATT 57.295 29.630 19.72 1.10 40.60 1.40
620 623 5.796350 ATTTCTGGTATTCGTTGTACTGC 57.204 39.130 0.00 0.00 0.00 4.40
621 624 3.241067 TCTGGTATTCGTTGTACTGCC 57.759 47.619 0.00 0.00 0.00 4.85
622 625 2.563620 TCTGGTATTCGTTGTACTGCCA 59.436 45.455 0.00 0.00 0.00 4.92
623 626 3.196901 TCTGGTATTCGTTGTACTGCCAT 59.803 43.478 0.00 0.00 0.00 4.40
624 627 4.403113 TCTGGTATTCGTTGTACTGCCATA 59.597 41.667 0.00 0.00 0.00 2.74
625 628 5.087391 TGGTATTCGTTGTACTGCCATAA 57.913 39.130 0.00 0.00 0.00 1.90
626 629 5.676552 TGGTATTCGTTGTACTGCCATAAT 58.323 37.500 0.00 0.00 0.00 1.28
627 630 6.116806 TGGTATTCGTTGTACTGCCATAATT 58.883 36.000 0.00 0.00 0.00 1.40
628 631 6.037720 TGGTATTCGTTGTACTGCCATAATTG 59.962 38.462 0.00 0.00 0.00 2.32
629 632 6.259167 GGTATTCGTTGTACTGCCATAATTGA 59.741 38.462 0.00 0.00 0.00 2.57
630 633 6.751514 ATTCGTTGTACTGCCATAATTGAA 57.248 33.333 0.00 0.00 0.00 2.69
631 634 5.794687 TCGTTGTACTGCCATAATTGAAG 57.205 39.130 0.00 0.00 0.00 3.02
632 635 5.483811 TCGTTGTACTGCCATAATTGAAGA 58.516 37.500 0.00 0.00 0.00 2.87
633 636 6.112734 TCGTTGTACTGCCATAATTGAAGAT 58.887 36.000 0.00 0.00 0.00 2.40
634 637 7.269316 TCGTTGTACTGCCATAATTGAAGATA 58.731 34.615 0.00 0.00 0.00 1.98
635 638 7.438160 TCGTTGTACTGCCATAATTGAAGATAG 59.562 37.037 0.00 0.00 0.00 2.08
636 639 7.438160 CGTTGTACTGCCATAATTGAAGATAGA 59.562 37.037 0.00 0.00 0.00 1.98
637 640 9.277783 GTTGTACTGCCATAATTGAAGATAGAT 57.722 33.333 0.00 0.00 0.00 1.98
638 641 8.837788 TGTACTGCCATAATTGAAGATAGATG 57.162 34.615 0.00 0.00 0.00 2.90
639 642 8.650490 TGTACTGCCATAATTGAAGATAGATGA 58.350 33.333 0.00 0.00 0.00 2.92
640 643 9.494271 GTACTGCCATAATTGAAGATAGATGAA 57.506 33.333 0.00 0.00 0.00 2.57
641 644 8.985315 ACTGCCATAATTGAAGATAGATGAAA 57.015 30.769 0.00 0.00 0.00 2.69
642 645 9.412460 ACTGCCATAATTGAAGATAGATGAAAA 57.588 29.630 0.00 0.00 0.00 2.29
643 646 9.894783 CTGCCATAATTGAAGATAGATGAAAAG 57.105 33.333 0.00 0.00 0.00 2.27
644 647 9.631257 TGCCATAATTGAAGATAGATGAAAAGA 57.369 29.630 0.00 0.00 0.00 2.52
660 663 7.967303 AGATGAAAAGATCAGAAATTTTCTCGC 59.033 33.333 8.71 2.24 42.53 5.03
661 664 6.969366 TGAAAAGATCAGAAATTTTCTCGCA 58.031 32.000 8.71 0.00 41.38 5.10
662 665 7.424803 TGAAAAGATCAGAAATTTTCTCGCAA 58.575 30.769 8.71 0.00 41.38 4.85
663 666 7.920151 TGAAAAGATCAGAAATTTTCTCGCAAA 59.080 29.630 8.71 0.00 41.38 3.68
664 667 8.647143 AAAAGATCAGAAATTTTCTCGCAAAA 57.353 26.923 8.71 0.00 38.11 2.44
665 668 8.647143 AAAGATCAGAAATTTTCTCGCAAAAA 57.353 26.923 8.71 0.00 38.11 1.94
692 695 9.794685 AAAGACTGAAATCTGTTCTTTTCTTTC 57.205 29.630 0.00 0.00 33.87 2.62
693 696 8.511604 AGACTGAAATCTGTTCTTTTCTTTCA 57.488 30.769 0.00 0.00 33.87 2.69
695 698 7.199078 ACTGAAATCTGTTCTTTTCTTTCAGC 58.801 34.615 17.92 0.00 46.80 4.26
696 699 6.201517 TGAAATCTGTTCTTTTCTTTCAGCG 58.798 36.000 0.00 0.00 33.87 5.18
697 700 6.038161 TGAAATCTGTTCTTTTCTTTCAGCGA 59.962 34.615 0.00 0.00 33.87 4.93
698 701 6.566197 AATCTGTTCTTTTCTTTCAGCGAT 57.434 33.333 0.00 0.00 0.00 4.58
699 702 6.566197 ATCTGTTCTTTTCTTTCAGCGATT 57.434 33.333 0.00 0.00 0.00 3.34
700 703 5.751680 TCTGTTCTTTTCTTTCAGCGATTG 58.248 37.500 0.00 0.00 0.00 2.67
701 704 5.527214 TCTGTTCTTTTCTTTCAGCGATTGA 59.473 36.000 0.00 0.00 0.00 2.57
702 705 6.205464 TCTGTTCTTTTCTTTCAGCGATTGAT 59.795 34.615 0.00 0.00 35.27 2.57
703 706 6.738114 TGTTCTTTTCTTTCAGCGATTGATT 58.262 32.000 0.00 0.00 35.27 2.57
704 707 7.202526 TGTTCTTTTCTTTCAGCGATTGATTT 58.797 30.769 0.00 0.00 35.27 2.17
705 708 7.706179 TGTTCTTTTCTTTCAGCGATTGATTTT 59.294 29.630 0.00 0.00 35.27 1.82
706 709 8.542953 GTTCTTTTCTTTCAGCGATTGATTTTT 58.457 29.630 0.00 0.00 35.27 1.94
726 729 4.829064 TTTTTACTTTGTCAGCAGCGAT 57.171 36.364 0.00 0.00 0.00 4.58
727 730 4.829064 TTTTACTTTGTCAGCAGCGATT 57.171 36.364 0.00 0.00 0.00 3.34
728 731 3.811722 TTACTTTGTCAGCAGCGATTG 57.188 42.857 0.00 0.00 0.00 2.67
729 732 1.882912 ACTTTGTCAGCAGCGATTGA 58.117 45.000 0.00 0.00 0.00 2.57
730 733 2.430465 ACTTTGTCAGCAGCGATTGAT 58.570 42.857 0.00 0.00 0.00 2.57
731 734 2.816087 ACTTTGTCAGCAGCGATTGATT 59.184 40.909 0.00 0.00 0.00 2.57
732 735 3.254166 ACTTTGTCAGCAGCGATTGATTT 59.746 39.130 0.00 0.00 0.00 2.17
733 736 3.921119 TTGTCAGCAGCGATTGATTTT 57.079 38.095 0.00 0.00 0.00 1.82
734 737 3.921119 TGTCAGCAGCGATTGATTTTT 57.079 38.095 0.00 0.00 0.00 1.94
753 756 3.658757 TTTTTAGGCAAAGCAGCGATT 57.341 38.095 0.00 0.00 34.64 3.34
754 757 2.634982 TTTAGGCAAAGCAGCGATTG 57.365 45.000 9.03 9.03 34.64 2.67
755 758 0.810648 TTAGGCAAAGCAGCGATTGG 59.189 50.000 13.74 0.00 34.64 3.16
756 759 0.322456 TAGGCAAAGCAGCGATTGGT 60.322 50.000 13.74 0.00 39.75 3.67
757 760 0.322456 AGGCAAAGCAGCGATTGGTA 60.322 50.000 13.74 0.00 36.24 3.25
758 761 0.179163 GGCAAAGCAGCGATTGGTAC 60.179 55.000 13.74 0.00 36.24 3.34
759 762 0.521291 GCAAAGCAGCGATTGGTACA 59.479 50.000 13.74 0.00 36.24 2.90
760 763 1.133025 GCAAAGCAGCGATTGGTACAT 59.867 47.619 13.74 0.00 39.30 2.29
761 764 2.792542 GCAAAGCAGCGATTGGTACATC 60.793 50.000 13.74 0.00 39.30 3.06
762 765 2.401583 AAGCAGCGATTGGTACATCA 57.598 45.000 0.00 0.00 39.30 3.07
763 766 1.945387 AGCAGCGATTGGTACATCAG 58.055 50.000 0.00 0.00 39.30 2.90
764 767 1.482182 AGCAGCGATTGGTACATCAGA 59.518 47.619 0.00 0.00 39.30 3.27
765 768 1.594862 GCAGCGATTGGTACATCAGAC 59.405 52.381 0.00 0.00 39.30 3.51
766 769 1.854743 CAGCGATTGGTACATCAGACG 59.145 52.381 0.00 0.00 39.30 4.18
767 770 0.577269 GCGATTGGTACATCAGACGC 59.423 55.000 0.00 0.00 39.30 5.19
768 771 0.846401 CGATTGGTACATCAGACGCG 59.154 55.000 3.53 3.53 39.30 6.01
769 772 1.533129 CGATTGGTACATCAGACGCGA 60.533 52.381 15.93 0.00 39.30 5.87
770 773 2.536365 GATTGGTACATCAGACGCGAA 58.464 47.619 15.93 0.00 39.30 4.70
771 774 2.665649 TTGGTACATCAGACGCGAAT 57.334 45.000 15.93 0.00 39.30 3.34
772 775 1.921243 TGGTACATCAGACGCGAATG 58.079 50.000 15.93 11.40 0.00 2.67
773 776 1.203758 TGGTACATCAGACGCGAATGT 59.796 47.619 15.93 18.10 0.00 2.71
774 777 1.588404 GGTACATCAGACGCGAATGTG 59.412 52.381 15.93 13.36 0.00 3.21
775 778 1.588404 GTACATCAGACGCGAATGTGG 59.412 52.381 15.93 9.84 0.00 4.17
776 779 1.349627 CATCAGACGCGAATGTGGC 59.650 57.895 15.93 0.00 0.00 5.01
777 780 1.815421 ATCAGACGCGAATGTGGCC 60.815 57.895 15.93 0.00 32.45 5.36
778 781 3.499737 CAGACGCGAATGTGGCCC 61.500 66.667 15.93 0.00 32.45 5.80
779 782 3.706373 AGACGCGAATGTGGCCCT 61.706 61.111 15.93 0.00 32.45 5.19
780 783 3.499737 GACGCGAATGTGGCCCTG 61.500 66.667 15.93 0.00 0.00 4.45
809 812 5.817296 TGGCAATTATATATGAGCTTAGCCG 59.183 40.000 0.00 0.00 39.99 5.52
810 813 6.049149 GGCAATTATATATGAGCTTAGCCGA 58.951 40.000 0.00 0.00 0.00 5.54
834 837 0.404040 TTAAACCCAGCACCTCCCAG 59.596 55.000 0.00 0.00 0.00 4.45
880 884 1.071071 CACCCGTTCCTACAAGAACCA 59.929 52.381 0.00 0.00 42.63 3.67
893 897 1.112916 AGAACCAAAACAAGGCCCGG 61.113 55.000 0.00 0.00 0.00 5.73
912 917 3.879180 TTTCGCCCCTCCCTTTGCC 62.879 63.158 0.00 0.00 0.00 4.52
946 951 1.830408 CCCTACCGAGCTCCTCCTG 60.830 68.421 8.47 0.00 0.00 3.86
1247 1258 2.709475 CTTGCTGGATTACCGCGC 59.291 61.111 0.00 0.00 38.08 6.86
1273 1284 4.937620 TGTTAGGTGTTGCTGAGATCATTC 59.062 41.667 0.00 0.00 0.00 2.67
1332 1359 4.458397 TCGATTCGTCAGGTAGGAAGTAT 58.542 43.478 5.89 0.00 35.56 2.12
1409 1439 1.742831 GTTTGGGTCATGCGCAGATTA 59.257 47.619 18.32 0.00 41.18 1.75
1451 1481 6.889722 TCTACCAATTTCTTTTGTAGGGATGG 59.110 38.462 0.00 0.00 0.00 3.51
1594 1630 4.187506 AGGGATGAGAGTAGAGTTACCC 57.812 50.000 0.00 0.00 35.53 3.69
1669 1728 2.415491 GCGTTTTATCAAGCCTTGACCC 60.415 50.000 9.77 0.00 43.48 4.46
1670 1729 3.081804 CGTTTTATCAAGCCTTGACCCT 58.918 45.455 9.77 0.00 43.48 4.34
1671 1730 3.127030 CGTTTTATCAAGCCTTGACCCTC 59.873 47.826 9.77 0.00 43.48 4.30
1672 1731 2.691409 TTATCAAGCCTTGACCCTCG 57.309 50.000 9.77 0.00 43.48 4.63
1673 1732 0.178068 TATCAAGCCTTGACCCTCGC 59.822 55.000 9.77 0.00 43.48 5.03
1674 1733 1.841302 ATCAAGCCTTGACCCTCGCA 61.841 55.000 9.77 0.00 43.48 5.10
1675 1734 1.600636 CAAGCCTTGACCCTCGCAA 60.601 57.895 0.00 0.00 0.00 4.85
1676 1735 1.302832 AAGCCTTGACCCTCGCAAG 60.303 57.895 0.00 0.00 41.77 4.01
1677 1736 2.032681 GCCTTGACCCTCGCAAGT 59.967 61.111 0.00 0.00 40.79 3.16
1678 1737 1.600916 GCCTTGACCCTCGCAAGTT 60.601 57.895 0.00 0.00 40.79 2.66
1679 1738 0.321298 GCCTTGACCCTCGCAAGTTA 60.321 55.000 0.00 0.00 40.79 2.24
1680 1739 1.439679 CCTTGACCCTCGCAAGTTAC 58.560 55.000 0.00 0.00 40.79 2.50
1681 1740 1.002087 CCTTGACCCTCGCAAGTTACT 59.998 52.381 0.00 0.00 40.79 2.24
1682 1741 2.069273 CTTGACCCTCGCAAGTTACTG 58.931 52.381 0.00 0.00 38.29 2.74
1683 1742 0.320374 TGACCCTCGCAAGTTACTGG 59.680 55.000 0.00 0.00 39.48 4.00
1684 1743 0.391263 GACCCTCGCAAGTTACTGGG 60.391 60.000 3.49 3.49 40.37 4.45
1685 1744 1.745489 CCCTCGCAAGTTACTGGGC 60.745 63.158 0.00 0.00 39.48 5.36
1686 1745 1.003839 CCTCGCAAGTTACTGGGCA 60.004 57.895 9.38 0.00 39.48 5.36
1687 1746 0.605319 CCTCGCAAGTTACTGGGCAA 60.605 55.000 9.38 0.00 39.48 4.52
1688 1747 1.453155 CTCGCAAGTTACTGGGCAAT 58.547 50.000 9.38 0.00 39.48 3.56
1689 1748 2.627945 CTCGCAAGTTACTGGGCAATA 58.372 47.619 9.38 0.00 39.48 1.90
1690 1749 3.206150 CTCGCAAGTTACTGGGCAATAT 58.794 45.455 9.38 0.00 39.48 1.28
1691 1750 3.202906 TCGCAAGTTACTGGGCAATATC 58.797 45.455 9.38 0.00 39.48 1.63
1780 1843 4.836125 TTGATTTGCTTTCTGGTGTCTC 57.164 40.909 0.00 0.00 0.00 3.36
2103 2169 0.487772 TCCTACCTAGGCATCTCCCC 59.512 60.000 9.30 0.00 43.31 4.81
2124 2190 4.565652 CCCTCTACAAATAAGCACTGGTGT 60.566 45.833 2.64 0.00 0.00 4.16
2222 2288 2.649531 TCAATTCCACGTCACCCTTT 57.350 45.000 0.00 0.00 0.00 3.11
2274 2340 1.203287 GGGTTAGCGACGTCTACCTTT 59.797 52.381 14.70 0.00 0.00 3.11
2373 2439 4.401519 TGTACTTACGCAGCTAGGATCTTT 59.598 41.667 0.00 0.00 0.00 2.52
2511 2638 1.407618 TCGCTAATCTACACCGTGCAT 59.592 47.619 0.00 0.00 0.00 3.96
2516 2643 2.472695 ATCTACACCGTGCATGTGTT 57.527 45.000 24.26 9.09 44.19 3.32
2517 2644 1.790755 TCTACACCGTGCATGTGTTC 58.209 50.000 24.26 0.00 44.19 3.18
2518 2645 1.069358 TCTACACCGTGCATGTGTTCA 59.931 47.619 24.26 12.34 44.19 3.18
2519 2646 1.194547 CTACACCGTGCATGTGTTCAC 59.805 52.381 24.26 0.00 44.19 3.18
2526 2653 4.495091 CATGTGTTCACGTGCACG 57.505 55.556 35.99 35.99 46.33 5.34
2527 2654 1.082821 CATGTGTTCACGTGCACGG 60.083 57.895 39.21 28.05 44.95 4.94
2528 2655 1.522806 ATGTGTTCACGTGCACGGT 60.523 52.632 39.21 23.69 44.95 4.83
2529 2656 1.771073 ATGTGTTCACGTGCACGGTG 61.771 55.000 39.21 31.59 44.95 4.94
2530 2657 2.125472 TGTTCACGTGCACGGTGT 60.125 55.556 39.21 19.36 44.95 4.16
2531 2658 1.141234 TGTTCACGTGCACGGTGTA 59.859 52.632 39.21 25.08 44.95 2.90
2532 2659 0.872451 TGTTCACGTGCACGGTGTAG 60.872 55.000 39.21 23.60 44.95 2.74
2533 2660 0.595567 GTTCACGTGCACGGTGTAGA 60.596 55.000 39.21 25.25 44.95 2.59
2534 2661 0.315886 TTCACGTGCACGGTGTAGAT 59.684 50.000 39.21 17.03 44.95 1.98
2535 2662 0.315886 TCACGTGCACGGTGTAGATT 59.684 50.000 39.21 16.26 44.95 2.40
2536 2663 1.540707 TCACGTGCACGGTGTAGATTA 59.459 47.619 39.21 16.61 44.95 1.75
2537 2664 1.917955 CACGTGCACGGTGTAGATTAG 59.082 52.381 39.21 11.08 44.95 1.73
2538 2665 0.921347 CGTGCACGGTGTAGATTAGC 59.079 55.000 31.15 0.00 35.37 3.09
2539 2666 0.921347 GTGCACGGTGTAGATTAGCG 59.079 55.000 10.24 0.00 43.90 4.26
2540 2667 0.812549 TGCACGGTGTAGATTAGCGA 59.187 50.000 10.24 0.00 41.14 4.93
2541 2668 1.407618 TGCACGGTGTAGATTAGCGAT 59.592 47.619 10.24 0.00 41.14 4.58
2542 2669 2.619646 TGCACGGTGTAGATTAGCGATA 59.380 45.455 10.24 0.00 41.14 2.92
2543 2670 3.254903 TGCACGGTGTAGATTAGCGATAT 59.745 43.478 10.24 0.00 41.14 1.63
2544 2671 3.608506 GCACGGTGTAGATTAGCGATATG 59.391 47.826 10.24 0.00 41.14 1.78
2545 2672 4.795268 CACGGTGTAGATTAGCGATATGT 58.205 43.478 0.00 0.00 41.14 2.29
2546 2673 5.220381 CACGGTGTAGATTAGCGATATGTT 58.780 41.667 0.00 0.00 41.14 2.71
2547 2674 5.342525 CACGGTGTAGATTAGCGATATGTTC 59.657 44.000 0.00 0.00 41.14 3.18
2548 2675 5.009310 ACGGTGTAGATTAGCGATATGTTCA 59.991 40.000 3.52 0.00 41.14 3.18
2549 2676 6.093404 CGGTGTAGATTAGCGATATGTTCAT 58.907 40.000 0.00 0.00 41.14 2.57
2550 2677 6.586463 CGGTGTAGATTAGCGATATGTTCATT 59.414 38.462 0.00 0.00 41.14 2.57
2551 2678 7.410835 CGGTGTAGATTAGCGATATGTTCATTG 60.411 40.741 0.00 0.00 41.14 2.82
2552 2679 7.598869 GGTGTAGATTAGCGATATGTTCATTGA 59.401 37.037 0.00 0.00 0.00 2.57
2553 2680 9.144747 GTGTAGATTAGCGATATGTTCATTGAT 57.855 33.333 0.00 0.00 0.00 2.57
2554 2681 9.358872 TGTAGATTAGCGATATGTTCATTGATC 57.641 33.333 0.00 0.00 0.00 2.92
2555 2682 7.517343 AGATTAGCGATATGTTCATTGATCG 57.483 36.000 11.32 11.32 43.11 3.69
2556 2683 7.093354 AGATTAGCGATATGTTCATTGATCGT 58.907 34.615 14.91 2.45 42.41 3.73
2557 2684 8.244113 AGATTAGCGATATGTTCATTGATCGTA 58.756 33.333 14.91 4.36 42.41 3.43
2558 2685 8.932945 ATTAGCGATATGTTCATTGATCGTAT 57.067 30.769 14.91 8.54 42.41 3.06
2559 2686 6.638168 AGCGATATGTTCATTGATCGTATG 57.362 37.500 12.19 2.11 42.41 2.39
2560 2687 5.062683 AGCGATATGTTCATTGATCGTATGC 59.937 40.000 12.19 13.88 42.41 3.14
2561 2688 5.725042 GCGATATGTTCATTGATCGTATGCC 60.725 44.000 12.19 1.90 42.41 4.40
2562 2689 5.499176 CGATATGTTCATTGATCGTATGCCG 60.499 44.000 12.19 8.16 37.11 5.69
2563 2690 2.899976 TGTTCATTGATCGTATGCCGT 58.100 42.857 3.41 0.00 37.94 5.68
2564 2691 4.048241 TGTTCATTGATCGTATGCCGTA 57.952 40.909 3.41 0.00 37.94 4.02
2565 2692 4.048504 TGTTCATTGATCGTATGCCGTAG 58.951 43.478 3.41 0.00 37.94 3.51
2566 2693 2.672714 TCATTGATCGTATGCCGTAGC 58.327 47.619 3.41 0.00 37.94 3.58
2579 2706 3.313690 TGCCGTAGCATATATGTTCACG 58.686 45.455 19.90 19.90 46.52 4.35
2731 2859 9.314133 AGGAAACAATAAAAGAAATCCTAGCTT 57.686 29.630 0.00 0.00 34.41 3.74
2808 2936 0.675837 TGACGTAGAGACTGGACCGG 60.676 60.000 0.00 0.00 0.00 5.28
2817 2945 1.935327 GACTGGACCGGAACTCCTCG 61.935 65.000 9.46 3.18 0.00 4.63
2829 2957 2.197283 ACTCCTCGAAGGTAGACGTT 57.803 50.000 0.00 0.00 36.53 3.99
2845 2973 4.976864 AGACGTTGGTAACCCAGTTTATT 58.023 39.130 0.00 0.00 43.15 1.40
2892 3021 4.210331 GGGATTGGATGCTTCAGTGTTAT 58.790 43.478 1.64 0.00 0.00 1.89
3006 3136 7.561356 TCATGTCCTCTCTTCATGTATACAGAA 59.439 37.037 11.91 12.94 39.61 3.02
3177 3307 2.976509 CGAGCTGCTCTGTTATGTATCG 59.023 50.000 25.59 6.61 0.00 2.92
3191 3321 8.581057 TGTTATGTATCGTGCAATTTTGTTTT 57.419 26.923 0.00 0.00 0.00 2.43
3209 3339 4.321217 TGTTTTGTTAGTTTGAACAACGCG 59.679 37.500 3.53 3.53 46.31 6.01
3363 3494 1.070758 TGTCTGAACTTGAGCTCACCC 59.929 52.381 18.03 6.40 0.00 4.61
3378 3509 2.686915 CTCACCCGATTACGAGGTTACT 59.313 50.000 0.00 0.00 39.61 2.24
3394 3525 6.435292 AGGTTACTCCATTGTGAACTACTT 57.565 37.500 0.00 0.00 39.02 2.24
3399 3530 4.841246 ACTCCATTGTGAACTACTTCCTCT 59.159 41.667 0.00 0.00 0.00 3.69
3409 3540 5.187186 TGAACTACTTCCTCTGTCCCATAAC 59.813 44.000 0.00 0.00 0.00 1.89
3413 3544 7.076446 ACTACTTCCTCTGTCCCATAACATAT 58.924 38.462 0.00 0.00 0.00 1.78
3417 3548 7.072961 ACTTCCTCTGTCCCATAACATATGATT 59.927 37.037 10.38 2.90 0.00 2.57
3425 3556 7.093596 TGTCCCATAACATATGATTGTTTTGCA 60.094 33.333 10.38 0.00 40.25 4.08
3448 3579 5.789643 AGCAGTTTTAGCTTCCAAAATGA 57.210 34.783 13.99 0.00 39.87 2.57
3449 3580 6.350629 AGCAGTTTTAGCTTCCAAAATGAT 57.649 33.333 13.99 7.43 39.87 2.45
3450 3581 6.393171 AGCAGTTTTAGCTTCCAAAATGATC 58.607 36.000 13.99 0.00 39.87 2.92
3481 3667 4.502645 GCAATTGTTAACGCAATGGTATCC 59.497 41.667 7.40 0.00 38.87 2.59
3498 3684 7.526142 TGGTATCCTGTCATATCTCTGTAAC 57.474 40.000 0.00 0.00 0.00 2.50
3500 3686 6.430308 GGTATCCTGTCATATCTCTGTAACGA 59.570 42.308 0.00 0.00 0.00 3.85
3502 3688 6.319141 TCCTGTCATATCTCTGTAACGATG 57.681 41.667 0.00 0.00 0.00 3.84
3503 3689 6.062095 TCCTGTCATATCTCTGTAACGATGA 58.938 40.000 0.00 0.00 0.00 2.92
3504 3690 6.546034 TCCTGTCATATCTCTGTAACGATGAA 59.454 38.462 0.00 0.00 0.00 2.57
3505 3691 6.638873 CCTGTCATATCTCTGTAACGATGAAC 59.361 42.308 0.00 0.00 0.00 3.18
3507 3693 7.716612 TGTCATATCTCTGTAACGATGAACAT 58.283 34.615 0.00 0.00 0.00 2.71
3508 3694 7.649306 TGTCATATCTCTGTAACGATGAACATG 59.351 37.037 0.00 0.00 0.00 3.21
3509 3695 7.115520 GTCATATCTCTGTAACGATGAACATGG 59.884 40.741 0.00 0.00 0.00 3.66
3510 3696 3.521560 TCTCTGTAACGATGAACATGGC 58.478 45.455 0.00 0.00 0.00 4.40
3511 3697 3.056179 TCTCTGTAACGATGAACATGGCA 60.056 43.478 0.00 0.00 0.00 4.92
3512 3698 3.669536 TCTGTAACGATGAACATGGCAA 58.330 40.909 0.00 0.00 0.00 4.52
3513 3699 4.068599 TCTGTAACGATGAACATGGCAAA 58.931 39.130 0.00 0.00 0.00 3.68
3514 3700 4.699735 TCTGTAACGATGAACATGGCAAAT 59.300 37.500 0.00 0.00 0.00 2.32
3515 3701 5.877564 TCTGTAACGATGAACATGGCAAATA 59.122 36.000 0.00 0.00 0.00 1.40
3516 3702 5.874831 TGTAACGATGAACATGGCAAATAC 58.125 37.500 0.00 0.00 0.00 1.89
3517 3703 5.645929 TGTAACGATGAACATGGCAAATACT 59.354 36.000 0.00 0.00 0.00 2.12
3518 3704 6.819146 TGTAACGATGAACATGGCAAATACTA 59.181 34.615 0.00 0.00 0.00 1.82
3519 3705 6.942532 AACGATGAACATGGCAAATACTAT 57.057 33.333 0.00 0.00 0.00 2.12
3520 3706 6.942532 ACGATGAACATGGCAAATACTATT 57.057 33.333 0.00 0.00 0.00 1.73
3521 3707 7.333528 ACGATGAACATGGCAAATACTATTT 57.666 32.000 0.00 0.00 0.00 1.40
3522 3708 7.771183 ACGATGAACATGGCAAATACTATTTT 58.229 30.769 0.00 0.00 0.00 1.82
3523 3709 7.915397 ACGATGAACATGGCAAATACTATTTTC 59.085 33.333 0.00 0.00 0.00 2.29
3524 3710 7.112009 CGATGAACATGGCAAATACTATTTTCG 59.888 37.037 0.00 0.00 0.00 3.46
3525 3711 7.151999 TGAACATGGCAAATACTATTTTCGT 57.848 32.000 0.00 0.00 0.00 3.85
3526 3712 7.598278 TGAACATGGCAAATACTATTTTCGTT 58.402 30.769 0.00 0.00 0.00 3.85
3527 3713 8.085296 TGAACATGGCAAATACTATTTTCGTTT 58.915 29.630 0.00 0.00 0.00 3.60
3528 3714 8.460831 AACATGGCAAATACTATTTTCGTTTC 57.539 30.769 0.00 0.00 0.00 2.78
3529 3715 7.826690 ACATGGCAAATACTATTTTCGTTTCT 58.173 30.769 0.00 0.00 0.00 2.52
3530 3716 7.968405 ACATGGCAAATACTATTTTCGTTTCTC 59.032 33.333 0.00 0.00 0.00 2.87
3531 3717 7.681939 TGGCAAATACTATTTTCGTTTCTCT 57.318 32.000 0.00 0.00 0.00 3.10
3532 3718 7.748847 TGGCAAATACTATTTTCGTTTCTCTC 58.251 34.615 0.00 0.00 0.00 3.20
3533 3719 7.389330 TGGCAAATACTATTTTCGTTTCTCTCA 59.611 33.333 0.00 0.00 0.00 3.27
3534 3720 8.398665 GGCAAATACTATTTTCGTTTCTCTCAT 58.601 33.333 0.00 0.00 0.00 2.90
3535 3721 9.774742 GCAAATACTATTTTCGTTTCTCTCATT 57.225 29.630 0.00 0.00 0.00 2.57
3539 3725 7.061752 ACTATTTTCGTTTCTCTCATTTCGG 57.938 36.000 0.00 0.00 0.00 4.30
3540 3726 6.872020 ACTATTTTCGTTTCTCTCATTTCGGA 59.128 34.615 0.00 0.00 0.00 4.55
3541 3727 5.994887 TTTTCGTTTCTCTCATTTCGGAA 57.005 34.783 0.00 0.00 0.00 4.30
3542 3728 5.591643 TTTCGTTTCTCTCATTTCGGAAG 57.408 39.130 0.00 0.00 0.00 3.46
3543 3729 2.993899 TCGTTTCTCTCATTTCGGAAGC 59.006 45.455 0.00 0.00 0.00 3.86
3544 3730 2.996621 CGTTTCTCTCATTTCGGAAGCT 59.003 45.455 0.00 0.00 0.00 3.74
3545 3731 4.082408 TCGTTTCTCTCATTTCGGAAGCTA 60.082 41.667 0.00 0.00 0.00 3.32
3546 3732 4.806247 CGTTTCTCTCATTTCGGAAGCTAT 59.194 41.667 0.00 0.00 0.00 2.97
3547 3733 5.292101 CGTTTCTCTCATTTCGGAAGCTATT 59.708 40.000 0.00 0.00 0.00 1.73
3548 3734 6.475727 CGTTTCTCTCATTTCGGAAGCTATTA 59.524 38.462 0.00 0.00 0.00 0.98
3549 3735 7.515371 CGTTTCTCTCATTTCGGAAGCTATTAC 60.515 40.741 0.00 0.00 0.00 1.89
3550 3736 6.716934 TCTCTCATTTCGGAAGCTATTACT 57.283 37.500 0.00 0.00 0.00 2.24
3551 3737 6.507900 TCTCTCATTTCGGAAGCTATTACTG 58.492 40.000 0.00 0.00 0.00 2.74
3552 3738 5.050490 TCTCATTTCGGAAGCTATTACTGC 58.950 41.667 0.00 0.00 0.00 4.40
3553 3739 5.023533 TCATTTCGGAAGCTATTACTGCT 57.976 39.130 0.00 0.00 43.32 4.24
3562 3748 4.083581 AGCTATTACTGCTTGCAAAACG 57.916 40.909 0.00 0.00 37.52 3.60
3563 3749 3.751175 AGCTATTACTGCTTGCAAAACGA 59.249 39.130 0.00 0.00 37.52 3.85
3564 3750 4.091424 GCTATTACTGCTTGCAAAACGAG 58.909 43.478 0.00 0.00 0.00 4.18
3565 3751 3.559238 ATTACTGCTTGCAAAACGAGG 57.441 42.857 0.00 0.00 0.00 4.63
3566 3752 1.961793 TACTGCTTGCAAAACGAGGT 58.038 45.000 0.00 0.00 0.00 3.85
3567 3753 1.102978 ACTGCTTGCAAAACGAGGTT 58.897 45.000 0.00 0.00 0.00 3.50
3568 3754 2.294074 ACTGCTTGCAAAACGAGGTTA 58.706 42.857 0.00 0.00 0.00 2.85
3569 3755 2.032924 ACTGCTTGCAAAACGAGGTTAC 59.967 45.455 0.00 0.00 0.00 2.50
3570 3756 1.003331 TGCTTGCAAAACGAGGTTACG 60.003 47.619 0.00 0.00 39.31 3.18
3587 3773 3.955291 CGCCATTCGTCTCTCTCAT 57.045 52.632 0.00 0.00 0.00 2.90
3588 3774 1.485397 CGCCATTCGTCTCTCTCATG 58.515 55.000 0.00 0.00 0.00 3.07
3589 3775 1.202348 CGCCATTCGTCTCTCTCATGT 60.202 52.381 0.00 0.00 0.00 3.21
3607 3799 5.009631 TCATGTTTGCATAACTTACCTGCT 58.990 37.500 11.34 0.00 36.84 4.24
3630 3822 3.102097 GCCATTTCTCCGGCGAAG 58.898 61.111 9.30 0.00 38.82 3.79
3679 3871 4.036734 GCCTGCGGATCATAAAGAATTTCA 59.963 41.667 0.00 0.00 40.09 2.69
3871 4079 2.046313 CACTGACACTGAATTTTGCGC 58.954 47.619 0.00 0.00 0.00 6.09
3878 4086 3.067461 ACACTGAATTTTGCGCAACCTAA 59.933 39.130 24.99 15.59 0.00 2.69
3885 4093 3.717400 TTTGCGCAACCTAATTGAACA 57.283 38.095 24.99 0.00 41.23 3.18
3924 4148 3.165058 TGCCAGATGATGTACTCGAAC 57.835 47.619 0.00 0.00 0.00 3.95
3970 4194 7.524367 GCATCAATTAGTGGCCTTATTAAGCAT 60.524 37.037 3.32 0.00 0.00 3.79
3983 4207 1.667236 TAAGCATCCACCAGAATGCG 58.333 50.000 2.04 0.00 44.08 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 2.292267 CGCTCTCATGGGCTAAAACAT 58.708 47.619 0.00 0.00 0.00 2.71
78 79 6.721318 TGGGATAGCTATTCTTTTTGTCAGT 58.279 36.000 11.90 0.00 0.00 3.41
117 118 5.606348 TCCCAAAACAAGCAGTAACAAAT 57.394 34.783 0.00 0.00 0.00 2.32
162 163 3.191669 CACGACAGTGTTTGGTGACTTA 58.808 45.455 14.38 0.00 43.15 2.24
188 189 1.104577 AGCTCACTCGGCTAGCTACC 61.105 60.000 15.72 0.00 44.55 3.18
236 237 1.962807 TGACAAAATTGCACCCTGAGG 59.037 47.619 0.00 0.00 40.04 3.86
238 239 3.896888 AGAATGACAAAATTGCACCCTGA 59.103 39.130 0.00 0.00 0.00 3.86
239 240 3.991773 CAGAATGACAAAATTGCACCCTG 59.008 43.478 0.00 0.00 39.69 4.45
287 288 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
288 289 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
289 290 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
290 291 4.855298 AATCTATTTTGGAACGGAGGGA 57.145 40.909 0.00 0.00 0.00 4.20
291 292 5.681639 AGTAATCTATTTTGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
292 293 6.346096 TGAGTAATCTATTTTGGAACGGAGG 58.654 40.000 0.00 0.00 0.00 4.30
293 294 7.549488 AGTTGAGTAATCTATTTTGGAACGGAG 59.451 37.037 0.00 0.00 0.00 4.63
294 295 7.391620 AGTTGAGTAATCTATTTTGGAACGGA 58.608 34.615 0.00 0.00 0.00 4.69
295 296 7.611213 AGTTGAGTAATCTATTTTGGAACGG 57.389 36.000 0.00 0.00 0.00 4.44
296 297 9.329913 CAAAGTTGAGTAATCTATTTTGGAACG 57.670 33.333 12.35 0.00 0.00 3.95
333 334 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
334 335 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
335 336 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
336 337 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
337 338 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
338 339 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
339 340 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
340 341 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
341 342 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
342 343 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
343 344 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
344 345 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
345 346 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
346 347 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
347 348 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
348 349 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
349 350 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
350 351 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
351 352 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
352 353 4.355549 TCTACTCCCTCCGTTCCAAAATA 58.644 43.478 0.00 0.00 0.00 1.40
353 354 3.178865 TCTACTCCCTCCGTTCCAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
354 355 2.612000 TCTACTCCCTCCGTTCCAAAA 58.388 47.619 0.00 0.00 0.00 2.44
355 356 2.314071 TCTACTCCCTCCGTTCCAAA 57.686 50.000 0.00 0.00 0.00 3.28
356 357 2.108168 CATCTACTCCCTCCGTTCCAA 58.892 52.381 0.00 0.00 0.00 3.53
357 358 1.776662 CATCTACTCCCTCCGTTCCA 58.223 55.000 0.00 0.00 0.00 3.53
358 359 0.389757 GCATCTACTCCCTCCGTTCC 59.610 60.000 0.00 0.00 0.00 3.62
359 360 0.389757 GGCATCTACTCCCTCCGTTC 59.610 60.000 0.00 0.00 0.00 3.95
360 361 0.325296 TGGCATCTACTCCCTCCGTT 60.325 55.000 0.00 0.00 0.00 4.44
361 362 1.043673 GTGGCATCTACTCCCTCCGT 61.044 60.000 0.00 0.00 0.00 4.69
362 363 1.742768 GTGGCATCTACTCCCTCCG 59.257 63.158 0.00 0.00 0.00 4.63
363 364 1.742768 CGTGGCATCTACTCCCTCC 59.257 63.158 0.00 0.00 0.00 4.30
364 365 1.068250 GCGTGGCATCTACTCCCTC 59.932 63.158 0.00 0.00 0.00 4.30
365 366 2.786495 CGCGTGGCATCTACTCCCT 61.786 63.158 0.00 0.00 0.00 4.20
366 367 2.279517 CGCGTGGCATCTACTCCC 60.280 66.667 0.00 0.00 0.00 4.30
367 368 2.962253 GCGCGTGGCATCTACTCC 60.962 66.667 8.43 0.00 42.87 3.85
368 369 2.962253 GGCGCGTGGCATCTACTC 60.962 66.667 18.64 0.00 46.16 2.59
369 370 3.461773 AGGCGCGTGGCATCTACT 61.462 61.111 25.26 0.00 46.16 2.57
383 384 2.433318 GGACTGTGCAGACGAGGC 60.433 66.667 6.17 0.00 0.00 4.70
385 386 0.387878 GACTGGACTGTGCAGACGAG 60.388 60.000 31.83 9.85 38.14 4.18
387 388 0.941463 GTGACTGGACTGTGCAGACG 60.941 60.000 31.83 10.56 38.14 4.18
392 393 3.319137 TTATCAGTGACTGGACTGTGC 57.681 47.619 13.33 0.00 43.38 4.57
394 395 3.369892 GCCATTATCAGTGACTGGACTGT 60.370 47.826 13.33 0.00 43.38 3.55
396 397 2.171448 GGCCATTATCAGTGACTGGACT 59.829 50.000 13.33 0.79 31.96 3.85
398 399 1.490490 GGGCCATTATCAGTGACTGGA 59.510 52.381 13.33 0.00 31.51 3.86
401 402 0.846693 GGGGGCCATTATCAGTGACT 59.153 55.000 4.39 0.00 0.00 3.41
428 429 0.036164 TGCTGACCAGGCGTAACAAT 59.964 50.000 0.00 0.00 0.00 2.71
449 450 2.139917 ACTCTTTTGAATACGCACGCA 58.860 42.857 0.00 0.00 0.00 5.24
499 500 7.041107 GGCATACATTGAATTGGTGTTACAAT 58.959 34.615 0.00 0.00 42.56 2.71
511 512 4.454728 AAACTTGCGGCATACATTGAAT 57.545 36.364 2.28 0.00 0.00 2.57
571 572 9.705290 AATAAAAATTGAGTCAATTACACCACC 57.295 29.630 27.15 0.00 42.32 4.61
594 597 9.037737 GCAGTACAACGAATACCAGAAATAATA 57.962 33.333 0.00 0.00 0.00 0.98
595 598 7.012044 GGCAGTACAACGAATACCAGAAATAAT 59.988 37.037 0.00 0.00 0.00 1.28
596 599 6.314400 GGCAGTACAACGAATACCAGAAATAA 59.686 38.462 0.00 0.00 0.00 1.40
597 600 5.813672 GGCAGTACAACGAATACCAGAAATA 59.186 40.000 0.00 0.00 0.00 1.40
598 601 4.634443 GGCAGTACAACGAATACCAGAAAT 59.366 41.667 0.00 0.00 0.00 2.17
599 602 3.998341 GGCAGTACAACGAATACCAGAAA 59.002 43.478 0.00 0.00 0.00 2.52
600 603 3.007074 TGGCAGTACAACGAATACCAGAA 59.993 43.478 0.00 0.00 0.00 3.02
601 604 2.563620 TGGCAGTACAACGAATACCAGA 59.436 45.455 0.00 0.00 0.00 3.86
602 605 2.967362 TGGCAGTACAACGAATACCAG 58.033 47.619 0.00 0.00 0.00 4.00
603 606 3.620427 ATGGCAGTACAACGAATACCA 57.380 42.857 0.00 0.00 0.00 3.25
604 607 6.259167 TCAATTATGGCAGTACAACGAATACC 59.741 38.462 0.00 0.00 0.00 2.73
605 608 7.241663 TCAATTATGGCAGTACAACGAATAC 57.758 36.000 0.00 0.00 0.00 1.89
606 609 7.766738 TCTTCAATTATGGCAGTACAACGAATA 59.233 33.333 0.00 0.00 0.00 1.75
607 610 6.597672 TCTTCAATTATGGCAGTACAACGAAT 59.402 34.615 0.00 0.00 0.00 3.34
608 611 5.935206 TCTTCAATTATGGCAGTACAACGAA 59.065 36.000 0.00 0.00 0.00 3.85
609 612 5.483811 TCTTCAATTATGGCAGTACAACGA 58.516 37.500 0.00 0.00 0.00 3.85
610 613 5.794687 TCTTCAATTATGGCAGTACAACG 57.205 39.130 0.00 0.00 0.00 4.10
611 614 8.662781 TCTATCTTCAATTATGGCAGTACAAC 57.337 34.615 0.00 0.00 0.00 3.32
612 615 9.276590 CATCTATCTTCAATTATGGCAGTACAA 57.723 33.333 0.00 0.00 0.00 2.41
613 616 8.650490 TCATCTATCTTCAATTATGGCAGTACA 58.350 33.333 0.00 0.00 0.00 2.90
614 617 9.494271 TTCATCTATCTTCAATTATGGCAGTAC 57.506 33.333 0.00 0.00 0.00 2.73
616 619 8.985315 TTTCATCTATCTTCAATTATGGCAGT 57.015 30.769 0.00 0.00 0.00 4.40
617 620 9.894783 CTTTTCATCTATCTTCAATTATGGCAG 57.105 33.333 0.00 0.00 0.00 4.85
618 621 9.631257 TCTTTTCATCTATCTTCAATTATGGCA 57.369 29.630 0.00 0.00 0.00 4.92
634 637 7.967303 GCGAGAAAATTTCTGATCTTTTCATCT 59.033 33.333 13.55 6.48 40.87 2.90
635 638 7.752239 TGCGAGAAAATTTCTGATCTTTTCATC 59.248 33.333 13.55 14.32 40.87 2.92
636 639 7.596494 TGCGAGAAAATTTCTGATCTTTTCAT 58.404 30.769 13.55 9.96 40.87 2.57
637 640 6.969366 TGCGAGAAAATTTCTGATCTTTTCA 58.031 32.000 13.55 0.00 40.87 2.69
638 641 7.858052 TTGCGAGAAAATTTCTGATCTTTTC 57.142 32.000 13.55 13.24 40.87 2.29
639 642 8.647143 TTTTGCGAGAAAATTTCTGATCTTTT 57.353 26.923 13.55 0.00 40.87 2.27
640 643 8.647143 TTTTTGCGAGAAAATTTCTGATCTTT 57.353 26.923 13.55 0.00 40.87 2.52
666 669 9.794685 GAAAGAAAAGAACAGATTTCAGTCTTT 57.205 29.630 0.00 0.00 37.87 2.52
667 670 8.960591 TGAAAGAAAAGAACAGATTTCAGTCTT 58.039 29.630 0.00 0.00 37.87 3.01
668 671 8.511604 TGAAAGAAAAGAACAGATTTCAGTCT 57.488 30.769 0.00 0.00 37.87 3.24
669 672 8.779603 CTGAAAGAAAAGAACAGATTTCAGTC 57.220 34.615 14.32 2.79 44.16 3.51
672 675 6.038161 TCGCTGAAAGAAAAGAACAGATTTCA 59.962 34.615 0.00 0.00 37.87 2.69
673 676 6.430451 TCGCTGAAAGAAAAGAACAGATTTC 58.570 36.000 0.00 0.00 34.07 2.17
674 677 6.377327 TCGCTGAAAGAAAAGAACAGATTT 57.623 33.333 0.00 0.00 34.07 2.17
675 678 6.566197 ATCGCTGAAAGAAAAGAACAGATT 57.434 33.333 0.00 0.00 34.07 2.40
676 679 6.205464 TCAATCGCTGAAAGAAAAGAACAGAT 59.795 34.615 0.00 0.00 34.07 2.90
677 680 5.527214 TCAATCGCTGAAAGAAAAGAACAGA 59.473 36.000 0.00 0.00 34.07 3.41
678 681 5.751680 TCAATCGCTGAAAGAAAAGAACAG 58.248 37.500 0.00 0.00 34.07 3.16
679 682 5.749596 TCAATCGCTGAAAGAAAAGAACA 57.250 34.783 0.00 0.00 34.07 3.18
680 683 7.629027 AAATCAATCGCTGAAAGAAAAGAAC 57.371 32.000 0.00 0.00 37.67 3.01
681 684 8.647143 AAAAATCAATCGCTGAAAGAAAAGAA 57.353 26.923 0.00 0.00 37.67 2.52
705 708 4.829064 ATCGCTGCTGACAAAGTAAAAA 57.171 36.364 0.00 0.00 0.00 1.94
706 709 4.274705 TCAATCGCTGCTGACAAAGTAAAA 59.725 37.500 0.00 0.00 0.00 1.52
707 710 3.812609 TCAATCGCTGCTGACAAAGTAAA 59.187 39.130 0.00 0.00 0.00 2.01
708 711 3.398406 TCAATCGCTGCTGACAAAGTAA 58.602 40.909 0.00 0.00 0.00 2.24
709 712 3.038788 TCAATCGCTGCTGACAAAGTA 57.961 42.857 0.00 0.00 0.00 2.24
710 713 1.882912 TCAATCGCTGCTGACAAAGT 58.117 45.000 0.00 0.00 0.00 2.66
711 714 3.482722 AATCAATCGCTGCTGACAAAG 57.517 42.857 0.00 0.00 0.00 2.77
712 715 3.921119 AAATCAATCGCTGCTGACAAA 57.079 38.095 0.00 0.00 0.00 2.83
713 716 3.921119 AAAATCAATCGCTGCTGACAA 57.079 38.095 0.00 0.00 0.00 3.18
714 717 3.921119 AAAAATCAATCGCTGCTGACA 57.079 38.095 0.00 0.00 0.00 3.58
733 736 3.316283 CAATCGCTGCTTTGCCTAAAAA 58.684 40.909 0.00 0.00 0.00 1.94
734 737 2.352617 CCAATCGCTGCTTTGCCTAAAA 60.353 45.455 0.00 0.00 0.00 1.52
735 738 1.202114 CCAATCGCTGCTTTGCCTAAA 59.798 47.619 0.00 0.00 0.00 1.85
736 739 0.810648 CCAATCGCTGCTTTGCCTAA 59.189 50.000 0.00 0.00 0.00 2.69
737 740 0.322456 ACCAATCGCTGCTTTGCCTA 60.322 50.000 0.00 0.00 0.00 3.93
738 741 0.322456 TACCAATCGCTGCTTTGCCT 60.322 50.000 0.00 0.00 0.00 4.75
739 742 0.179163 GTACCAATCGCTGCTTTGCC 60.179 55.000 0.00 0.00 0.00 4.52
740 743 0.521291 TGTACCAATCGCTGCTTTGC 59.479 50.000 0.00 0.00 0.00 3.68
741 744 2.419673 TGATGTACCAATCGCTGCTTTG 59.580 45.455 0.00 1.71 0.00 2.77
742 745 2.679837 CTGATGTACCAATCGCTGCTTT 59.320 45.455 0.00 0.00 0.00 3.51
743 746 2.093500 TCTGATGTACCAATCGCTGCTT 60.093 45.455 0.00 0.00 0.00 3.91
744 747 1.482182 TCTGATGTACCAATCGCTGCT 59.518 47.619 0.00 0.00 0.00 4.24
745 748 1.594862 GTCTGATGTACCAATCGCTGC 59.405 52.381 0.00 0.00 0.00 5.25
746 749 1.854743 CGTCTGATGTACCAATCGCTG 59.145 52.381 0.00 0.00 0.00 5.18
747 750 1.802880 GCGTCTGATGTACCAATCGCT 60.803 52.381 0.00 0.00 36.27 4.93
748 751 0.577269 GCGTCTGATGTACCAATCGC 59.423 55.000 0.00 0.00 33.75 4.58
749 752 0.846401 CGCGTCTGATGTACCAATCG 59.154 55.000 0.00 0.00 0.00 3.34
750 753 2.203800 TCGCGTCTGATGTACCAATC 57.796 50.000 5.77 0.00 0.00 2.67
751 754 2.665649 TTCGCGTCTGATGTACCAAT 57.334 45.000 5.77 0.00 0.00 3.16
752 755 2.267426 CATTCGCGTCTGATGTACCAA 58.733 47.619 5.77 0.00 0.00 3.67
753 756 1.203758 ACATTCGCGTCTGATGTACCA 59.796 47.619 5.77 0.00 0.00 3.25
754 757 1.588404 CACATTCGCGTCTGATGTACC 59.412 52.381 5.77 0.00 0.00 3.34
755 758 1.588404 CCACATTCGCGTCTGATGTAC 59.412 52.381 5.77 0.00 0.00 2.90
756 759 1.921243 CCACATTCGCGTCTGATGTA 58.079 50.000 5.77 0.00 0.00 2.29
757 760 1.361668 GCCACATTCGCGTCTGATGT 61.362 55.000 5.77 9.91 0.00 3.06
758 761 1.349627 GCCACATTCGCGTCTGATG 59.650 57.895 5.77 9.27 0.00 3.07
759 762 1.815421 GGCCACATTCGCGTCTGAT 60.815 57.895 5.77 0.00 0.00 2.90
760 763 2.434185 GGCCACATTCGCGTCTGA 60.434 61.111 5.77 0.00 0.00 3.27
761 764 3.499737 GGGCCACATTCGCGTCTG 61.500 66.667 4.39 7.60 0.00 3.51
762 765 3.706373 AGGGCCACATTCGCGTCT 61.706 61.111 6.18 0.00 0.00 4.18
763 766 3.499737 CAGGGCCACATTCGCGTC 61.500 66.667 6.18 0.00 0.00 5.19
780 783 3.242870 GCTCATATATAATTGCCAGGCGC 60.243 47.826 7.03 0.00 38.31 6.53
781 784 4.194640 AGCTCATATATAATTGCCAGGCG 58.805 43.478 7.03 0.00 0.00 5.52
800 803 3.504906 GGGTTTAAACTTTCGGCTAAGCT 59.495 43.478 17.50 0.00 0.00 3.74
809 812 3.005472 GGAGGTGCTGGGTTTAAACTTTC 59.995 47.826 17.50 8.65 0.00 2.62
810 813 2.963101 GGAGGTGCTGGGTTTAAACTTT 59.037 45.455 17.50 0.00 0.00 2.66
834 837 2.440980 CCTTGGGCTGGGCTTAGC 60.441 66.667 0.00 0.00 42.94 3.09
880 884 1.737201 CGAAACCGGGCCTTGTTTT 59.263 52.632 19.52 7.50 34.97 2.43
893 897 2.636412 GCAAAGGGAGGGGCGAAAC 61.636 63.158 0.00 0.00 0.00 2.78
912 917 2.434359 GGTTTGGGAGTCGGCGAG 60.434 66.667 11.20 0.00 0.00 5.03
973 978 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1020 1031 4.459089 AGCCGCTTCTCCCGCTTC 62.459 66.667 0.00 0.00 0.00 3.86
1247 1258 1.148310 CTCAGCAACACCTAACACCG 58.852 55.000 0.00 0.00 0.00 4.94
1254 1265 2.575279 AGGAATGATCTCAGCAACACCT 59.425 45.455 0.00 0.00 0.00 4.00
1332 1359 3.869065 CCCACTACGAGCTAATTTTCCA 58.131 45.455 0.00 0.00 0.00 3.53
1409 1439 3.320541 GGTAGATGCAGCTACTGACAGAT 59.679 47.826 33.91 0.14 40.42 2.90
1451 1481 3.057734 CACTTAGACAAACTCCACGGTC 58.942 50.000 0.00 0.00 0.00 4.79
1594 1630 6.795053 ACGTTTCAAATCATGCATTAATCG 57.205 33.333 0.00 0.00 0.00 3.34
1669 1728 1.453155 ATTGCCCAGTAACTTGCGAG 58.547 50.000 0.00 0.00 0.00 5.03
1670 1729 2.772077 TATTGCCCAGTAACTTGCGA 57.228 45.000 0.00 0.00 0.00 5.10
1671 1730 3.002656 CAGATATTGCCCAGTAACTTGCG 59.997 47.826 0.00 0.00 0.00 4.85
1672 1731 4.558538 CAGATATTGCCCAGTAACTTGC 57.441 45.455 0.00 0.00 0.00 4.01
1685 1744 8.562892 CAGTTAAAAGGACCTATGCAGATATTG 58.437 37.037 0.00 0.00 0.00 1.90
1686 1745 8.494433 TCAGTTAAAAGGACCTATGCAGATATT 58.506 33.333 0.00 0.00 0.00 1.28
1687 1746 8.034313 TCAGTTAAAAGGACCTATGCAGATAT 57.966 34.615 0.00 0.00 0.00 1.63
1688 1747 7.432148 TCAGTTAAAAGGACCTATGCAGATA 57.568 36.000 0.00 0.00 0.00 1.98
1689 1748 6.313519 TCAGTTAAAAGGACCTATGCAGAT 57.686 37.500 0.00 0.00 0.00 2.90
1690 1749 5.755409 TCAGTTAAAAGGACCTATGCAGA 57.245 39.130 0.00 0.00 0.00 4.26
1691 1750 6.173339 TCTTCAGTTAAAAGGACCTATGCAG 58.827 40.000 0.00 0.00 0.00 4.41
1697 1756 6.239317 GGCAAAATCTTCAGTTAAAAGGACCT 60.239 38.462 0.00 0.00 0.00 3.85
1780 1843 5.924475 AAATTCTATTGCTAACCCGATCG 57.076 39.130 8.51 8.51 0.00 3.69
1815 1878 6.832520 ATGTGACACAAACTGGCATAATTA 57.167 33.333 13.23 0.00 41.28 1.40
2103 2169 6.560253 AAACACCAGTGCTTATTTGTAGAG 57.440 37.500 0.00 0.00 0.00 2.43
2146 2212 2.376109 CTTACGGGAGGTGCTTAGAGA 58.624 52.381 0.00 0.00 0.00 3.10
2212 2278 6.037098 TCAACAAAAATACAAAAGGGTGACG 58.963 36.000 0.00 0.00 0.00 4.35
2222 2288 6.040278 TCTGGCATGACTCAACAAAAATACAA 59.960 34.615 0.00 0.00 0.00 2.41
2260 2326 0.524862 TCCTCAAAGGTAGACGTCGC 59.475 55.000 10.46 7.27 36.53 5.19
2274 2340 0.966920 GACTGGACCGAAACTCCTCA 59.033 55.000 0.00 0.00 0.00 3.86
2476 2603 9.358872 GTAGATTAGCGATATGTTCATTGATCA 57.641 33.333 0.00 0.00 0.00 2.92
2511 2638 2.125472 ACCGTGCACGTGAACACA 60.125 55.556 34.81 8.49 36.57 3.72
2515 2642 0.315886 ATCTACACCGTGCACGTGAA 59.684 50.000 34.81 21.68 37.74 3.18
2516 2643 0.315886 AATCTACACCGTGCACGTGA 59.684 50.000 34.81 23.41 37.74 4.35
2517 2644 1.917955 CTAATCTACACCGTGCACGTG 59.082 52.381 34.81 30.96 37.74 4.49
2518 2645 1.734707 GCTAATCTACACCGTGCACGT 60.735 52.381 34.81 20.95 37.74 4.49
2519 2646 0.921347 GCTAATCTACACCGTGCACG 59.079 55.000 31.77 31.77 39.44 5.34
2520 2647 0.921347 CGCTAATCTACACCGTGCAC 59.079 55.000 6.82 6.82 0.00 4.57
2521 2648 0.812549 TCGCTAATCTACACCGTGCA 59.187 50.000 0.00 0.00 0.00 4.57
2522 2649 2.135664 ATCGCTAATCTACACCGTGC 57.864 50.000 0.00 0.00 0.00 5.34
2523 2650 4.795268 ACATATCGCTAATCTACACCGTG 58.205 43.478 0.00 0.00 0.00 4.94
2524 2651 5.009310 TGAACATATCGCTAATCTACACCGT 59.991 40.000 0.00 0.00 0.00 4.83
2525 2652 5.458015 TGAACATATCGCTAATCTACACCG 58.542 41.667 0.00 0.00 0.00 4.94
2526 2653 7.598869 TCAATGAACATATCGCTAATCTACACC 59.401 37.037 0.00 0.00 0.00 4.16
2527 2654 8.520835 TCAATGAACATATCGCTAATCTACAC 57.479 34.615 0.00 0.00 0.00 2.90
2528 2655 9.358872 GATCAATGAACATATCGCTAATCTACA 57.641 33.333 0.00 0.00 0.00 2.74
2529 2656 8.527488 CGATCAATGAACATATCGCTAATCTAC 58.473 37.037 6.91 0.00 35.36 2.59
2530 2657 8.244113 ACGATCAATGAACATATCGCTAATCTA 58.756 33.333 15.34 0.00 43.76 1.98
2531 2658 7.093354 ACGATCAATGAACATATCGCTAATCT 58.907 34.615 15.34 0.00 43.76 2.40
2532 2659 7.283254 ACGATCAATGAACATATCGCTAATC 57.717 36.000 15.34 0.00 43.76 1.75
2533 2660 8.811378 CATACGATCAATGAACATATCGCTAAT 58.189 33.333 15.34 7.80 43.76 1.73
2534 2661 7.201435 GCATACGATCAATGAACATATCGCTAA 60.201 37.037 15.34 6.40 43.76 3.09
2535 2662 6.253512 GCATACGATCAATGAACATATCGCTA 59.746 38.462 15.34 9.97 43.76 4.26
2536 2663 5.062683 GCATACGATCAATGAACATATCGCT 59.937 40.000 15.34 8.71 43.76 4.93
2537 2664 5.251081 GCATACGATCAATGAACATATCGC 58.749 41.667 15.34 0.00 43.76 4.58
2538 2665 5.789507 GGCATACGATCAATGAACATATCG 58.210 41.667 14.39 14.39 45.06 2.92
2559 2686 3.121279 CACGTGAACATATATGCTACGGC 59.879 47.826 26.54 10.29 36.59 5.68
2560 2687 3.121279 GCACGTGAACATATATGCTACGG 59.879 47.826 26.54 20.05 36.59 4.02
2561 2688 3.733727 TGCACGTGAACATATATGCTACG 59.266 43.478 22.23 23.80 37.54 3.51
2562 2689 4.375005 CGTGCACGTGAACATATATGCTAC 60.375 45.833 30.50 8.27 34.18 3.58
2563 2690 3.733727 CGTGCACGTGAACATATATGCTA 59.266 43.478 30.50 0.00 34.18 3.49
2564 2691 2.539688 CGTGCACGTGAACATATATGCT 59.460 45.455 30.50 0.00 34.18 3.79
2565 2692 2.348498 CCGTGCACGTGAACATATATGC 60.348 50.000 34.81 3.88 37.74 3.14
2566 2693 2.863740 ACCGTGCACGTGAACATATATG 59.136 45.455 34.81 18.46 37.74 1.78
2567 2694 2.863740 CACCGTGCACGTGAACATATAT 59.136 45.455 34.81 7.76 37.74 0.86
2568 2695 2.263945 CACCGTGCACGTGAACATATA 58.736 47.619 34.81 0.00 37.74 0.86
2569 2696 1.075542 CACCGTGCACGTGAACATAT 58.924 50.000 34.81 7.95 37.74 1.78
2570 2697 0.249531 ACACCGTGCACGTGAACATA 60.250 50.000 34.81 0.29 37.74 2.29
2571 2698 0.249531 TACACCGTGCACGTGAACAT 60.250 50.000 34.81 18.93 37.74 2.71
2572 2699 0.872451 CTACACCGTGCACGTGAACA 60.872 55.000 34.81 20.34 37.74 3.18
2573 2700 0.595567 TCTACACCGTGCACGTGAAC 60.596 55.000 34.81 19.62 37.74 3.18
2574 2701 0.315886 ATCTACACCGTGCACGTGAA 59.684 50.000 34.81 21.68 37.74 3.18
2575 2702 0.315886 AATCTACACCGTGCACGTGA 59.684 50.000 34.81 23.41 37.74 4.35
2579 2706 0.921347 CGCTAATCTACACCGTGCAC 59.079 55.000 6.82 6.82 0.00 4.57
2794 2922 1.340795 GGAGTTCCGGTCCAGTCTCTA 60.341 57.143 0.00 0.00 33.84 2.43
2808 2936 2.083002 ACGTCTACCTTCGAGGAGTTC 58.917 52.381 7.76 0.00 37.67 3.01
2817 2945 2.299867 TGGGTTACCAACGTCTACCTTC 59.700 50.000 2.98 0.00 45.87 3.46
2829 2957 3.845860 TGCCAAATAAACTGGGTTACCA 58.154 40.909 2.98 0.00 46.94 3.25
2845 2973 2.104451 AGCCAACAATTTGTCATGCCAA 59.896 40.909 1.83 0.00 0.00 4.52
2912 3041 3.056607 CCTAAAAGGGTTGGCATGTTCAG 60.057 47.826 0.00 0.00 0.00 3.02
2915 3044 2.970987 ACCTAAAAGGGTTGGCATGTT 58.029 42.857 0.00 0.00 40.58 2.71
3006 3136 3.073650 ACTTCTTGCTTCCTCCATCAACT 59.926 43.478 0.00 0.00 0.00 3.16
3177 3307 8.836109 GTTCAAACTAACAAAACAAAATTGCAC 58.164 29.630 0.00 0.00 0.00 4.57
3191 3321 2.415857 ACACGCGTTGTTCAAACTAACA 59.584 40.909 10.22 0.00 33.09 2.41
3209 3339 4.708601 CACAAGCAGAATTACCGTTACAC 58.291 43.478 0.00 0.00 0.00 2.90
3363 3494 4.503007 CACAATGGAGTAACCTCGTAATCG 59.497 45.833 0.00 0.00 38.70 3.34
3378 3509 4.593206 ACAGAGGAAGTAGTTCACAATGGA 59.407 41.667 12.31 0.00 33.93 3.41
3394 3525 7.147320 AACAATCATATGTTATGGGACAGAGGA 60.147 37.037 1.90 0.00 41.56 3.71
3399 3530 7.093596 TGCAAAACAATCATATGTTATGGGACA 60.094 33.333 1.90 0.00 42.49 4.02
3409 3540 6.715344 AACTGCTTGCAAAACAATCATATG 57.285 33.333 0.00 0.00 37.72 1.78
3413 3544 5.006552 GCTAAAACTGCTTGCAAAACAATCA 59.993 36.000 0.00 0.00 37.72 2.57
3417 3548 4.122143 AGCTAAAACTGCTTGCAAAACA 57.878 36.364 0.00 0.70 37.52 2.83
3469 3655 4.825422 AGATATGACAGGATACCATTGCG 58.175 43.478 0.00 0.00 37.17 4.85
3475 3661 6.430308 TCGTTACAGAGATATGACAGGATACC 59.570 42.308 0.00 0.00 37.17 2.73
3481 3667 7.196331 TGTTCATCGTTACAGAGATATGACAG 58.804 38.462 0.00 0.00 0.00 3.51
3498 3684 7.112009 CGAAAATAGTATTTGCCATGTTCATCG 59.888 37.037 8.88 6.73 0.00 3.84
3500 3686 7.771183 ACGAAAATAGTATTTGCCATGTTCAT 58.229 30.769 8.88 0.00 0.00 2.57
3502 3688 8.460831 AAACGAAAATAGTATTTGCCATGTTC 57.539 30.769 8.88 0.88 0.00 3.18
3503 3689 8.303876 AGAAACGAAAATAGTATTTGCCATGTT 58.696 29.630 8.88 4.60 0.00 2.71
3504 3690 7.826690 AGAAACGAAAATAGTATTTGCCATGT 58.173 30.769 8.88 0.00 0.00 3.21
3505 3691 8.184192 AGAGAAACGAAAATAGTATTTGCCATG 58.816 33.333 8.88 0.00 0.00 3.66
3507 3693 7.389330 TGAGAGAAACGAAAATAGTATTTGCCA 59.611 33.333 8.88 0.00 0.00 4.92
3508 3694 7.748847 TGAGAGAAACGAAAATAGTATTTGCC 58.251 34.615 8.88 4.04 0.00 4.52
3509 3695 9.774742 AATGAGAGAAACGAAAATAGTATTTGC 57.225 29.630 8.88 6.22 0.00 3.68
3513 3699 8.818057 CCGAAATGAGAGAAACGAAAATAGTAT 58.182 33.333 0.00 0.00 0.00 2.12
3514 3700 8.030692 TCCGAAATGAGAGAAACGAAAATAGTA 58.969 33.333 0.00 0.00 0.00 1.82
3515 3701 6.872020 TCCGAAATGAGAGAAACGAAAATAGT 59.128 34.615 0.00 0.00 0.00 2.12
3516 3702 7.290857 TCCGAAATGAGAGAAACGAAAATAG 57.709 36.000 0.00 0.00 0.00 1.73
3517 3703 7.623506 GCTTCCGAAATGAGAGAAACGAAAATA 60.624 37.037 0.00 0.00 0.00 1.40
3518 3704 6.554334 TTCCGAAATGAGAGAAACGAAAAT 57.446 33.333 0.00 0.00 0.00 1.82
3519 3705 5.560183 GCTTCCGAAATGAGAGAAACGAAAA 60.560 40.000 0.00 0.00 0.00 2.29
3520 3706 4.084013 GCTTCCGAAATGAGAGAAACGAAA 60.084 41.667 0.00 0.00 0.00 3.46
3521 3707 3.432252 GCTTCCGAAATGAGAGAAACGAA 59.568 43.478 0.00 0.00 0.00 3.85
3522 3708 2.993899 GCTTCCGAAATGAGAGAAACGA 59.006 45.455 0.00 0.00 0.00 3.85
3523 3709 2.996621 AGCTTCCGAAATGAGAGAAACG 59.003 45.455 0.00 0.00 0.00 3.60
3524 3710 6.670077 AATAGCTTCCGAAATGAGAGAAAC 57.330 37.500 0.00 0.00 0.00 2.78
3525 3711 7.492669 CAGTAATAGCTTCCGAAATGAGAGAAA 59.507 37.037 0.00 0.00 0.00 2.52
3526 3712 6.980978 CAGTAATAGCTTCCGAAATGAGAGAA 59.019 38.462 0.00 0.00 0.00 2.87
3527 3713 6.507900 CAGTAATAGCTTCCGAAATGAGAGA 58.492 40.000 0.00 0.00 0.00 3.10
3528 3714 5.176590 GCAGTAATAGCTTCCGAAATGAGAG 59.823 44.000 0.00 0.00 0.00 3.20
3529 3715 5.050490 GCAGTAATAGCTTCCGAAATGAGA 58.950 41.667 0.00 0.00 0.00 3.27
3530 3716 5.053145 AGCAGTAATAGCTTCCGAAATGAG 58.947 41.667 0.00 0.00 39.87 2.90
3531 3717 5.023533 AGCAGTAATAGCTTCCGAAATGA 57.976 39.130 0.00 0.00 39.87 2.57
3541 3727 3.751175 TCGTTTTGCAAGCAGTAATAGCT 59.249 39.130 0.00 0.00 45.97 3.32
3542 3728 4.078363 TCGTTTTGCAAGCAGTAATAGC 57.922 40.909 0.00 0.00 0.00 2.97
3543 3729 4.154195 ACCTCGTTTTGCAAGCAGTAATAG 59.846 41.667 0.00 0.00 0.00 1.73
3544 3730 4.069304 ACCTCGTTTTGCAAGCAGTAATA 58.931 39.130 0.00 0.00 0.00 0.98
3545 3731 2.884639 ACCTCGTTTTGCAAGCAGTAAT 59.115 40.909 0.00 0.00 0.00 1.89
3546 3732 2.294074 ACCTCGTTTTGCAAGCAGTAA 58.706 42.857 0.00 0.00 0.00 2.24
3547 3733 1.961793 ACCTCGTTTTGCAAGCAGTA 58.038 45.000 0.00 0.00 0.00 2.74
3548 3734 1.102978 AACCTCGTTTTGCAAGCAGT 58.897 45.000 0.00 0.00 0.00 4.40
3549 3735 2.650608 GTAACCTCGTTTTGCAAGCAG 58.349 47.619 0.00 0.00 0.00 4.24
3550 3736 1.003331 CGTAACCTCGTTTTGCAAGCA 60.003 47.619 0.00 0.00 0.00 3.91
3551 3737 1.670326 CGTAACCTCGTTTTGCAAGC 58.330 50.000 0.00 0.00 0.00 4.01
3552 3738 1.662026 GGCGTAACCTCGTTTTGCAAG 60.662 52.381 0.00 0.00 34.51 4.01
3553 3739 0.308376 GGCGTAACCTCGTTTTGCAA 59.692 50.000 0.00 0.00 34.51 4.08
3554 3740 0.814410 TGGCGTAACCTCGTTTTGCA 60.814 50.000 0.00 0.00 40.22 4.08
3555 3741 0.519961 ATGGCGTAACCTCGTTTTGC 59.480 50.000 0.00 0.00 40.22 3.68
3556 3742 2.723618 CGAATGGCGTAACCTCGTTTTG 60.724 50.000 0.00 0.00 40.22 2.44
3557 3743 1.461897 CGAATGGCGTAACCTCGTTTT 59.538 47.619 0.00 0.00 40.22 2.43
3558 3744 1.073177 CGAATGGCGTAACCTCGTTT 58.927 50.000 0.00 0.00 40.22 3.60
3559 3745 2.745728 CGAATGGCGTAACCTCGTT 58.254 52.632 0.00 0.00 40.22 3.85
3560 3746 4.489249 CGAATGGCGTAACCTCGT 57.511 55.556 0.00 0.00 40.22 4.18
3570 3756 2.593346 ACATGAGAGAGACGAATGGC 57.407 50.000 0.00 0.00 0.00 4.40
3584 3770 5.009631 AGCAGGTAAGTTATGCAAACATGA 58.990 37.500 10.34 0.00 42.45 3.07
3585 3771 5.314923 AGCAGGTAAGTTATGCAAACATG 57.685 39.130 10.34 0.00 42.45 3.21
3586 3772 5.243730 ACAAGCAGGTAAGTTATGCAAACAT 59.756 36.000 10.34 5.15 42.45 2.71
3587 3773 4.582656 ACAAGCAGGTAAGTTATGCAAACA 59.417 37.500 10.34 0.00 42.45 2.83
3588 3774 5.121221 ACAAGCAGGTAAGTTATGCAAAC 57.879 39.130 10.34 0.00 42.45 2.93
3589 3775 6.624861 GCATACAAGCAGGTAAGTTATGCAAA 60.625 38.462 10.34 0.00 42.45 3.68
3629 3821 1.261238 AAGGCTGGAACTAGAGCGCT 61.261 55.000 11.27 11.27 35.95 5.92
3630 3822 1.086634 CAAGGCTGGAACTAGAGCGC 61.087 60.000 0.00 0.00 35.95 5.92
3631 3823 0.532573 TCAAGGCTGGAACTAGAGCG 59.467 55.000 0.00 0.00 35.95 5.03
3748 3940 6.070021 TGAGTAGATGATGGTGAACTGGATTT 60.070 38.462 0.00 0.00 0.00 2.17
3834 4042 6.649141 GTGTCAGTGTGTTTGGATAGTATTCA 59.351 38.462 0.00 0.00 0.00 2.57
3840 4048 4.631131 TCAGTGTCAGTGTGTTTGGATAG 58.369 43.478 7.54 0.00 0.00 2.08
3871 4079 8.606040 AAACCATGAAATGTTCAATTAGGTTG 57.394 30.769 15.17 1.93 44.81 3.77
3906 4130 4.936891 TCATGTTCGAGTACATCATCTGG 58.063 43.478 0.00 0.00 36.64 3.86
3937 4161 5.368989 AGGCCACTAATTGATGCTTACTAC 58.631 41.667 5.01 0.00 0.00 2.73
3938 4162 5.630415 AGGCCACTAATTGATGCTTACTA 57.370 39.130 5.01 0.00 0.00 1.82
3939 4163 4.510167 AGGCCACTAATTGATGCTTACT 57.490 40.909 5.01 0.00 0.00 2.24
3970 4194 5.883115 TGATAATTAAACGCATTCTGGTGGA 59.117 36.000 0.00 0.00 0.00 4.02
3983 4207 7.582667 ACTACCCAAGCCATGATAATTAAAC 57.417 36.000 0.00 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.