Multiple sequence alignment - TraesCS2D01G423200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G423200 chr2D 100.000 3162 0 0 675 3836 536479430 536482591 0.000000e+00 5840.0
1 TraesCS2D01G423200 chr2D 84.352 933 125 16 1064 1986 542127713 542126792 0.000000e+00 894.0
2 TraesCS2D01G423200 chr2D 100.000 467 0 0 1 467 536478756 536479222 0.000000e+00 863.0
3 TraesCS2D01G423200 chr2D 81.204 947 137 29 1056 1986 535582367 535581446 0.000000e+00 725.0
4 TraesCS2D01G423200 chr2D 88.701 177 18 2 3226 3402 589522099 589521925 8.350000e-52 215.0
5 TraesCS2D01G423200 chr2D 87.432 183 22 1 3221 3403 533780112 533780293 3.880000e-50 209.0
6 TraesCS2D01G423200 chr2B 94.013 1904 74 13 844 2728 637791171 637793053 0.000000e+00 2848.0
7 TraesCS2D01G423200 chr2B 94.075 962 42 3 863 1809 637797223 637798184 0.000000e+00 1447.0
8 TraesCS2D01G423200 chr2B 94.086 930 50 1 1799 2728 637798648 637799572 0.000000e+00 1408.0
9 TraesCS2D01G423200 chr2B 81.163 929 147 20 1064 1986 638751575 638752481 0.000000e+00 721.0
10 TraesCS2D01G423200 chr2B 92.181 486 27 5 2745 3220 637793037 637793521 0.000000e+00 676.0
11 TraesCS2D01G423200 chr2B 82.402 716 113 9 1272 1982 646996100 646995393 2.530000e-171 612.0
12 TraesCS2D01G423200 chr2B 87.417 453 40 6 3401 3836 637793510 637793962 4.420000e-139 505.0
13 TraesCS2D01G423200 chr2B 87.613 444 39 5 3400 3827 637829232 637829675 5.720000e-138 501.0
14 TraesCS2D01G423200 chr2B 90.708 226 12 7 2998 3220 637829025 637829244 3.750000e-75 292.0
15 TraesCS2D01G423200 chr2B 88.764 178 8 4 2745 2915 637799556 637799728 1.400000e-49 207.0
16 TraesCS2D01G423200 chr2A 95.419 1768 57 9 978 2728 678994468 678996228 0.000000e+00 2795.0
17 TraesCS2D01G423200 chr2A 83.531 929 133 14 1064 1982 684915847 684914929 0.000000e+00 850.0
18 TraesCS2D01G423200 chr2A 80.957 940 143 22 1060 1986 678679019 678678103 0.000000e+00 712.0
19 TraesCS2D01G423200 chr2A 91.461 445 28 5 3401 3836 678996687 678997130 1.520000e-168 603.0
20 TraesCS2D01G423200 chr2A 89.024 492 33 10 2745 3220 678996212 678996698 1.190000e-164 590.0
21 TraesCS2D01G423200 chr2A 79.574 563 106 7 2083 2642 34156660 34156104 9.990000e-106 394.0
22 TraesCS2D01G423200 chr3D 79.672 610 122 2 2082 2690 532124680 532124072 4.550000e-119 438.0
23 TraesCS2D01G423200 chr3D 87.500 184 22 1 3220 3403 83492072 83491890 1.080000e-50 211.0
24 TraesCS2D01G423200 chr3B 79.700 601 122 0 2078 2678 704261721 704261121 5.890000e-118 435.0
25 TraesCS2D01G423200 chr6B 88.268 179 17 4 3225 3403 70877547 70877373 1.080000e-50 211.0
26 TraesCS2D01G423200 chr1A 87.166 187 21 2 3220 3403 575387173 575386987 3.880000e-50 209.0
27 TraesCS2D01G423200 chr3A 87.097 186 20 4 3225 3408 161466727 161466544 1.400000e-49 207.0
28 TraesCS2D01G423200 chr1D 86.702 188 21 3 3216 3403 18894995 18894812 5.020000e-49 206.0
29 TraesCS2D01G423200 chr4D 86.957 184 21 3 3221 3403 466669431 466669250 1.810000e-48 204.0
30 TraesCS2D01G423200 chr5A 85.946 185 25 1 3220 3404 487808132 487808315 3.020000e-46 196.0
31 TraesCS2D01G423200 chr5A 71.907 388 84 20 2261 2631 613579553 613579932 5.280000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G423200 chr2D 536478756 536482591 3835 False 3351.500000 5840 100.0000 1 3836 2 chr2D.!!$F2 3835
1 TraesCS2D01G423200 chr2D 542126792 542127713 921 True 894.000000 894 84.3520 1064 1986 1 chr2D.!!$R2 922
2 TraesCS2D01G423200 chr2D 535581446 535582367 921 True 725.000000 725 81.2040 1056 1986 1 chr2D.!!$R1 930
3 TraesCS2D01G423200 chr2B 637791171 637799728 8557 False 1181.833333 2848 91.7560 844 3836 6 chr2B.!!$F2 2992
4 TraesCS2D01G423200 chr2B 638751575 638752481 906 False 721.000000 721 81.1630 1064 1986 1 chr2B.!!$F1 922
5 TraesCS2D01G423200 chr2B 646995393 646996100 707 True 612.000000 612 82.4020 1272 1982 1 chr2B.!!$R1 710
6 TraesCS2D01G423200 chr2B 637829025 637829675 650 False 396.500000 501 89.1605 2998 3827 2 chr2B.!!$F3 829
7 TraesCS2D01G423200 chr2A 678994468 678997130 2662 False 1329.333333 2795 91.9680 978 3836 3 chr2A.!!$F1 2858
8 TraesCS2D01G423200 chr2A 684914929 684915847 918 True 850.000000 850 83.5310 1064 1982 1 chr2A.!!$R3 918
9 TraesCS2D01G423200 chr2A 678678103 678679019 916 True 712.000000 712 80.9570 1060 1986 1 chr2A.!!$R2 926
10 TraesCS2D01G423200 chr2A 34156104 34156660 556 True 394.000000 394 79.5740 2083 2642 1 chr2A.!!$R1 559
11 TraesCS2D01G423200 chr3D 532124072 532124680 608 True 438.000000 438 79.6720 2082 2690 1 chr3D.!!$R2 608
12 TraesCS2D01G423200 chr3B 704261121 704261721 600 True 435.000000 435 79.7000 2078 2678 1 chr3B.!!$R1 600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 740 0.031585 CGGTTTCAGAGTCGACACCA 59.968 55.0 19.5 0.0 35.80 4.17 F
1479 1507 0.180642 AGATCTGCATGGTGGAGCTG 59.819 55.0 0.0 0.0 35.65 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1569 1612 0.179111 CGAGATTTACTGGCTCGCCA 60.179 55.0 10.64 10.64 43.88 5.69 R
3224 3314 0.108756 GTTGACCGAGACCTAGCCAC 60.109 60.0 0.00 0.00 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.798315 ATTTTGGAGCTAGAATGATGATCG 57.202 37.500 0.00 0.00 0.00 3.69
24 25 5.535753 TTTGGAGCTAGAATGATGATCGA 57.464 39.130 0.00 0.00 0.00 3.59
25 26 5.535753 TTGGAGCTAGAATGATGATCGAA 57.464 39.130 0.00 0.00 0.00 3.71
26 27 5.131594 TGGAGCTAGAATGATGATCGAAG 57.868 43.478 0.00 0.00 0.00 3.79
27 28 4.586421 TGGAGCTAGAATGATGATCGAAGT 59.414 41.667 0.00 0.00 0.00 3.01
28 29 5.160641 GGAGCTAGAATGATGATCGAAGTC 58.839 45.833 0.00 0.00 0.00 3.01
29 30 4.793071 AGCTAGAATGATGATCGAAGTCG 58.207 43.478 0.00 0.00 41.45 4.18
43 44 5.562506 TCGAAGTCGATCTGTAGTTTGAT 57.437 39.130 0.00 0.00 44.22 2.57
44 45 5.570344 TCGAAGTCGATCTGTAGTTTGATC 58.430 41.667 0.00 0.00 44.22 2.92
45 46 5.354513 TCGAAGTCGATCTGTAGTTTGATCT 59.645 40.000 0.00 0.00 44.22 2.75
46 47 6.030849 CGAAGTCGATCTGTAGTTTGATCTT 58.969 40.000 0.00 0.00 43.02 2.40
47 48 7.065443 TCGAAGTCGATCTGTAGTTTGATCTTA 59.935 37.037 0.00 0.00 44.22 2.10
48 49 7.696872 CGAAGTCGATCTGTAGTTTGATCTTAA 59.303 37.037 0.00 0.00 43.02 1.85
49 50 9.355215 GAAGTCGATCTGTAGTTTGATCTTAAA 57.645 33.333 0.00 0.00 37.51 1.52
50 51 9.877178 AAGTCGATCTGTAGTTTGATCTTAAAT 57.123 29.630 0.00 0.00 37.51 1.40
51 52 9.877178 AGTCGATCTGTAGTTTGATCTTAAATT 57.123 29.630 0.00 0.00 37.51 1.82
52 53 9.907576 GTCGATCTGTAGTTTGATCTTAAATTG 57.092 33.333 0.00 0.00 37.51 2.32
53 54 9.098355 TCGATCTGTAGTTTGATCTTAAATTGG 57.902 33.333 0.00 0.00 37.51 3.16
54 55 7.852945 CGATCTGTAGTTTGATCTTAAATTGGC 59.147 37.037 0.00 0.00 37.51 4.52
55 56 7.994425 TCTGTAGTTTGATCTTAAATTGGCA 57.006 32.000 0.00 0.00 0.00 4.92
56 57 8.044060 TCTGTAGTTTGATCTTAAATTGGCAG 57.956 34.615 0.00 0.00 0.00 4.85
57 58 6.620678 TGTAGTTTGATCTTAAATTGGCAGC 58.379 36.000 0.00 0.00 0.00 5.25
58 59 5.726980 AGTTTGATCTTAAATTGGCAGCA 57.273 34.783 0.00 0.00 0.00 4.41
59 60 5.473039 AGTTTGATCTTAAATTGGCAGCAC 58.527 37.500 0.00 0.00 0.00 4.40
60 61 3.763097 TGATCTTAAATTGGCAGCACG 57.237 42.857 0.00 0.00 0.00 5.34
61 62 3.081061 TGATCTTAAATTGGCAGCACGT 58.919 40.909 0.00 0.00 0.00 4.49
62 63 4.257731 TGATCTTAAATTGGCAGCACGTA 58.742 39.130 0.00 0.00 0.00 3.57
63 64 4.697828 TGATCTTAAATTGGCAGCACGTAA 59.302 37.500 0.00 0.00 0.00 3.18
64 65 5.356751 TGATCTTAAATTGGCAGCACGTAAT 59.643 36.000 0.00 0.00 0.00 1.89
65 66 6.540551 TGATCTTAAATTGGCAGCACGTAATA 59.459 34.615 0.00 0.00 0.00 0.98
66 67 6.935741 TCTTAAATTGGCAGCACGTAATAT 57.064 33.333 0.00 0.00 0.00 1.28
67 68 8.615878 ATCTTAAATTGGCAGCACGTAATATA 57.384 30.769 0.00 0.00 0.00 0.86
68 69 8.615878 TCTTAAATTGGCAGCACGTAATATAT 57.384 30.769 0.00 0.00 0.00 0.86
69 70 9.062524 TCTTAAATTGGCAGCACGTAATATATT 57.937 29.630 2.97 2.97 0.00 1.28
70 71 9.677567 CTTAAATTGGCAGCACGTAATATATTT 57.322 29.630 2.68 0.00 0.00 1.40
74 75 9.624697 AATTGGCAGCACGTAATATATTTTATG 57.375 29.630 2.68 4.21 0.00 1.90
75 76 7.139896 TGGCAGCACGTAATATATTTTATGG 57.860 36.000 2.68 1.77 0.00 2.74
76 77 6.027749 GGCAGCACGTAATATATTTTATGGC 58.972 40.000 2.68 9.03 0.00 4.40
77 78 6.027749 GCAGCACGTAATATATTTTATGGCC 58.972 40.000 2.68 0.00 0.00 5.36
78 79 6.348950 GCAGCACGTAATATATTTTATGGCCA 60.349 38.462 8.56 8.56 0.00 5.36
79 80 7.589395 CAGCACGTAATATATTTTATGGCCAA 58.411 34.615 10.96 0.00 0.00 4.52
80 81 8.243426 CAGCACGTAATATATTTTATGGCCAAT 58.757 33.333 10.96 0.00 0.00 3.16
81 82 8.458843 AGCACGTAATATATTTTATGGCCAATC 58.541 33.333 10.96 0.00 0.00 2.67
82 83 7.428183 GCACGTAATATATTTTATGGCCAATCG 59.572 37.037 10.96 0.00 0.00 3.34
83 84 8.661257 CACGTAATATATTTTATGGCCAATCGA 58.339 33.333 10.96 0.00 0.00 3.59
84 85 9.391006 ACGTAATATATTTTATGGCCAATCGAT 57.609 29.630 10.96 4.81 0.00 3.59
89 90 7.765695 ATATTTTATGGCCAATCGATTCAGT 57.234 32.000 10.96 0.00 0.00 3.41
90 91 4.898829 TTTATGGCCAATCGATTCAGTG 57.101 40.909 10.96 0.00 0.00 3.66
91 92 2.715749 ATGGCCAATCGATTCAGTGA 57.284 45.000 10.96 0.00 0.00 3.41
92 93 2.488204 TGGCCAATCGATTCAGTGAA 57.512 45.000 7.92 8.27 0.00 3.18
93 94 2.083774 TGGCCAATCGATTCAGTGAAC 58.916 47.619 7.92 1.72 0.00 3.18
94 95 2.290260 TGGCCAATCGATTCAGTGAACT 60.290 45.455 7.92 0.00 0.00 3.01
95 96 3.055458 TGGCCAATCGATTCAGTGAACTA 60.055 43.478 7.92 0.00 0.00 2.24
96 97 3.938963 GGCCAATCGATTCAGTGAACTAA 59.061 43.478 7.92 0.00 0.00 2.24
97 98 4.034510 GGCCAATCGATTCAGTGAACTAAG 59.965 45.833 7.92 0.25 0.00 2.18
98 99 4.631813 GCCAATCGATTCAGTGAACTAAGT 59.368 41.667 7.92 0.00 0.00 2.24
99 100 5.122396 GCCAATCGATTCAGTGAACTAAGTT 59.878 40.000 7.92 0.00 0.00 2.66
100 101 6.312918 GCCAATCGATTCAGTGAACTAAGTTA 59.687 38.462 7.92 0.00 0.00 2.24
101 102 7.011482 GCCAATCGATTCAGTGAACTAAGTTAT 59.989 37.037 7.92 0.00 0.00 1.89
102 103 9.529325 CCAATCGATTCAGTGAACTAAGTTATA 57.471 33.333 7.92 0.00 0.00 0.98
143 144 8.955061 AATCAAGTTCAACTTCATTTCGTATG 57.045 30.769 0.00 0.00 36.03 2.39
144 145 7.490962 TCAAGTTCAACTTCATTTCGTATGT 57.509 32.000 0.00 0.00 36.03 2.29
145 146 7.351981 TCAAGTTCAACTTCATTTCGTATGTG 58.648 34.615 0.00 0.00 36.03 3.21
146 147 5.689819 AGTTCAACTTCATTTCGTATGTGC 58.310 37.500 0.00 0.00 0.00 4.57
147 148 4.320667 TCAACTTCATTTCGTATGTGCG 57.679 40.909 1.38 0.00 0.00 5.34
148 149 2.806288 ACTTCATTTCGTATGTGCGC 57.194 45.000 0.00 0.00 0.00 6.09
149 150 2.073056 ACTTCATTTCGTATGTGCGCA 58.927 42.857 5.66 5.66 0.00 6.09
150 151 2.159707 ACTTCATTTCGTATGTGCGCAC 60.160 45.455 33.11 33.11 0.00 5.34
151 152 0.368567 TCATTTCGTATGTGCGCACG 59.631 50.000 33.22 22.53 39.48 5.34
152 153 0.094558 CATTTCGTATGTGCGCACGT 59.905 50.000 35.14 35.14 39.18 4.49
153 154 0.094558 ATTTCGTATGTGCGCACGTG 59.905 50.000 38.55 25.69 39.18 4.49
154 155 1.216298 TTTCGTATGTGCGCACGTGT 61.216 50.000 38.55 26.73 39.18 4.49
155 156 0.386985 TTCGTATGTGCGCACGTGTA 60.387 50.000 38.55 25.76 39.18 2.90
156 157 0.179158 TCGTATGTGCGCACGTGTAT 60.179 50.000 38.55 26.51 39.18 2.29
157 158 1.063764 TCGTATGTGCGCACGTGTATA 59.936 47.619 38.55 25.51 39.18 1.47
158 159 2.048498 CGTATGTGCGCACGTGTATAT 58.952 47.619 38.55 25.50 33.56 0.86
159 160 3.059051 TCGTATGTGCGCACGTGTATATA 60.059 43.478 38.55 24.52 39.18 0.86
160 161 3.664947 CGTATGTGCGCACGTGTATATAA 59.335 43.478 38.55 18.89 33.56 0.98
161 162 4.322539 CGTATGTGCGCACGTGTATATAAT 59.677 41.667 38.55 23.52 33.56 1.28
162 163 4.903638 ATGTGCGCACGTGTATATAATC 57.096 40.909 33.17 6.66 0.00 1.75
163 164 2.722116 TGTGCGCACGTGTATATAATCG 59.278 45.455 33.22 10.36 0.00 3.34
164 165 2.975193 GTGCGCACGTGTATATAATCGA 59.025 45.455 26.77 0.00 0.00 3.59
165 166 3.422876 GTGCGCACGTGTATATAATCGAA 59.577 43.478 26.77 0.51 0.00 3.71
166 167 4.089493 GTGCGCACGTGTATATAATCGAAT 59.911 41.667 26.77 0.00 0.00 3.34
167 168 4.682401 TGCGCACGTGTATATAATCGAATT 59.318 37.500 18.38 0.00 0.00 2.17
168 169 5.176039 TGCGCACGTGTATATAATCGAATTT 59.824 36.000 18.38 0.00 0.00 1.82
169 170 6.362820 TGCGCACGTGTATATAATCGAATTTA 59.637 34.615 18.38 0.00 0.00 1.40
170 171 6.887763 GCGCACGTGTATATAATCGAATTTAG 59.112 38.462 18.38 0.00 0.00 1.85
171 172 7.201291 GCGCACGTGTATATAATCGAATTTAGA 60.201 37.037 18.38 0.00 0.00 2.10
172 173 8.304834 CGCACGTGTATATAATCGAATTTAGAG 58.695 37.037 18.38 0.00 0.00 2.43
173 174 9.125906 GCACGTGTATATAATCGAATTTAGAGT 57.874 33.333 18.38 0.00 0.00 3.24
204 205 6.799926 TTAAGAATTGCCAGAATTTTTGCC 57.200 33.333 0.00 0.00 0.00 4.52
205 206 4.354893 AGAATTGCCAGAATTTTTGCCA 57.645 36.364 0.00 0.00 0.00 4.92
206 207 4.716794 AGAATTGCCAGAATTTTTGCCAA 58.283 34.783 0.00 0.00 0.00 4.52
207 208 5.318630 AGAATTGCCAGAATTTTTGCCAAT 58.681 33.333 0.00 0.00 0.00 3.16
208 209 5.771165 AGAATTGCCAGAATTTTTGCCAATT 59.229 32.000 8.14 8.14 0.00 2.32
209 210 6.265876 AGAATTGCCAGAATTTTTGCCAATTT 59.734 30.769 9.36 0.55 0.00 1.82
210 211 5.848833 TTGCCAGAATTTTTGCCAATTTT 57.151 30.435 0.00 0.00 0.00 1.82
211 212 5.184340 TGCCAGAATTTTTGCCAATTTTG 57.816 34.783 0.00 0.00 31.17 2.44
212 213 4.885907 TGCCAGAATTTTTGCCAATTTTGA 59.114 33.333 5.63 0.00 32.45 2.69
213 214 5.535406 TGCCAGAATTTTTGCCAATTTTGAT 59.465 32.000 5.63 0.00 32.45 2.57
214 215 5.859648 GCCAGAATTTTTGCCAATTTTGATG 59.140 36.000 5.63 0.00 32.45 3.07
215 216 6.383415 CCAGAATTTTTGCCAATTTTGATGG 58.617 36.000 5.63 0.00 41.08 3.51
216 217 6.383415 CAGAATTTTTGCCAATTTTGATGGG 58.617 36.000 0.00 0.00 38.44 4.00
217 218 4.787260 ATTTTTGCCAATTTTGATGGGC 57.213 36.364 0.00 0.00 46.58 5.36
225 226 6.100404 GCCAATTTTGATGGGCATAATAGA 57.900 37.500 0.00 0.00 45.70 1.98
226 227 6.161381 GCCAATTTTGATGGGCATAATAGAG 58.839 40.000 0.00 0.00 45.70 2.43
227 228 6.694447 CCAATTTTGATGGGCATAATAGAGG 58.306 40.000 0.00 0.00 34.15 3.69
228 229 6.268387 CCAATTTTGATGGGCATAATAGAGGT 59.732 38.462 0.00 0.00 34.15 3.85
229 230 7.202029 CCAATTTTGATGGGCATAATAGAGGTT 60.202 37.037 0.00 0.00 34.15 3.50
230 231 6.959639 TTTTGATGGGCATAATAGAGGTTC 57.040 37.500 0.00 0.00 0.00 3.62
231 232 4.271696 TGATGGGCATAATAGAGGTTCG 57.728 45.455 0.00 0.00 0.00 3.95
232 233 3.007940 TGATGGGCATAATAGAGGTTCGG 59.992 47.826 0.00 0.00 0.00 4.30
233 234 1.071699 TGGGCATAATAGAGGTTCGGC 59.928 52.381 0.00 0.00 0.00 5.54
234 235 1.071699 GGGCATAATAGAGGTTCGGCA 59.928 52.381 0.00 0.00 0.00 5.69
235 236 2.417719 GGCATAATAGAGGTTCGGCAG 58.582 52.381 0.00 0.00 0.00 4.85
236 237 1.801178 GCATAATAGAGGTTCGGCAGC 59.199 52.381 0.00 0.00 0.00 5.25
237 238 2.806745 GCATAATAGAGGTTCGGCAGCA 60.807 50.000 0.00 0.00 0.00 4.41
238 239 2.890808 TAATAGAGGTTCGGCAGCAG 57.109 50.000 0.00 0.00 0.00 4.24
239 240 0.179000 AATAGAGGTTCGGCAGCAGG 59.821 55.000 0.00 0.00 0.00 4.85
240 241 0.687757 ATAGAGGTTCGGCAGCAGGA 60.688 55.000 0.00 0.00 0.00 3.86
241 242 1.605058 TAGAGGTTCGGCAGCAGGAC 61.605 60.000 0.00 0.00 0.00 3.85
242 243 3.240134 GAGGTTCGGCAGCAGGACA 62.240 63.158 6.29 0.00 0.00 4.02
243 244 2.281484 GGTTCGGCAGCAGGACAA 60.281 61.111 6.29 0.00 0.00 3.18
244 245 2.617274 GGTTCGGCAGCAGGACAAC 61.617 63.158 6.29 0.00 0.00 3.32
245 246 2.664851 TTCGGCAGCAGGACAACG 60.665 61.111 0.00 0.00 0.00 4.10
246 247 3.454587 TTCGGCAGCAGGACAACGT 62.455 57.895 0.00 0.00 0.00 3.99
247 248 3.414700 CGGCAGCAGGACAACGTC 61.415 66.667 0.00 0.00 0.00 4.34
248 249 2.280797 GGCAGCAGGACAACGTCA 60.281 61.111 0.00 0.00 33.68 4.35
249 250 2.607892 GGCAGCAGGACAACGTCAC 61.608 63.158 0.00 0.00 33.68 3.67
250 251 1.595382 GCAGCAGGACAACGTCACT 60.595 57.895 0.00 0.00 33.68 3.41
251 252 1.835483 GCAGCAGGACAACGTCACTG 61.835 60.000 0.00 0.00 35.51 3.66
252 253 0.249447 CAGCAGGACAACGTCACTGA 60.249 55.000 13.42 0.00 34.88 3.41
253 254 0.681733 AGCAGGACAACGTCACTGAT 59.318 50.000 13.42 7.01 34.88 2.90
254 255 1.893137 AGCAGGACAACGTCACTGATA 59.107 47.619 13.42 0.00 34.88 2.15
255 256 2.497675 AGCAGGACAACGTCACTGATAT 59.502 45.455 13.42 0.00 34.88 1.63
256 257 3.055819 AGCAGGACAACGTCACTGATATT 60.056 43.478 13.42 0.00 34.88 1.28
257 258 3.684788 GCAGGACAACGTCACTGATATTT 59.315 43.478 13.42 0.00 34.88 1.40
258 259 4.154195 GCAGGACAACGTCACTGATATTTT 59.846 41.667 13.42 0.00 34.88 1.82
259 260 5.621422 CAGGACAACGTCACTGATATTTTG 58.379 41.667 0.00 0.00 34.88 2.44
260 261 5.179368 CAGGACAACGTCACTGATATTTTGT 59.821 40.000 0.00 0.00 34.88 2.83
261 262 5.179368 AGGACAACGTCACTGATATTTTGTG 59.821 40.000 0.00 0.00 33.68 3.33
262 263 5.356882 ACAACGTCACTGATATTTTGTGG 57.643 39.130 0.00 0.00 33.04 4.17
263 264 5.060506 ACAACGTCACTGATATTTTGTGGA 58.939 37.500 0.00 0.00 33.04 4.02
264 265 5.705441 ACAACGTCACTGATATTTTGTGGAT 59.295 36.000 0.00 0.00 33.04 3.41
265 266 6.128282 ACAACGTCACTGATATTTTGTGGATC 60.128 38.462 0.00 0.00 33.04 3.36
266 267 5.487433 ACGTCACTGATATTTTGTGGATCA 58.513 37.500 0.00 0.00 33.04 2.92
267 268 6.115446 ACGTCACTGATATTTTGTGGATCAT 58.885 36.000 0.00 0.00 33.04 2.45
268 269 6.599244 ACGTCACTGATATTTTGTGGATCATT 59.401 34.615 0.00 0.00 33.04 2.57
269 270 7.121168 ACGTCACTGATATTTTGTGGATCATTT 59.879 33.333 0.00 0.00 33.04 2.32
270 271 7.430211 CGTCACTGATATTTTGTGGATCATTTG 59.570 37.037 0.00 0.00 33.04 2.32
271 272 7.221452 GTCACTGATATTTTGTGGATCATTTGC 59.779 37.037 0.00 0.00 33.04 3.68
272 273 7.036829 CACTGATATTTTGTGGATCATTTGCA 58.963 34.615 0.00 0.00 0.00 4.08
273 274 7.222031 CACTGATATTTTGTGGATCATTTGCAG 59.778 37.037 0.00 0.00 0.00 4.41
274 275 6.044046 TGATATTTTGTGGATCATTTGCAGC 58.956 36.000 0.00 0.00 0.00 5.25
275 276 2.350899 TTTGTGGATCATTTGCAGCG 57.649 45.000 0.00 0.00 0.00 5.18
276 277 1.246649 TTGTGGATCATTTGCAGCGT 58.753 45.000 0.00 0.00 0.00 5.07
277 278 1.246649 TGTGGATCATTTGCAGCGTT 58.753 45.000 0.00 0.00 0.00 4.84
278 279 1.068402 TGTGGATCATTTGCAGCGTTG 60.068 47.619 0.00 0.00 0.00 4.10
279 280 1.199789 GTGGATCATTTGCAGCGTTGA 59.800 47.619 2.38 0.00 0.00 3.18
280 281 1.469703 TGGATCATTTGCAGCGTTGAG 59.530 47.619 2.38 0.00 0.00 3.02
281 282 1.202222 GGATCATTTGCAGCGTTGAGG 60.202 52.381 2.38 0.00 0.00 3.86
282 283 0.171903 ATCATTTGCAGCGTTGAGGC 59.828 50.000 2.38 0.00 0.00 4.70
283 284 0.890542 TCATTTGCAGCGTTGAGGCT 60.891 50.000 2.38 0.00 46.13 4.58
289 290 2.032681 AGCGTTGAGGCTGAACCC 59.967 61.111 11.28 2.11 42.86 4.11
290 291 3.056328 GCGTTGAGGCTGAACCCC 61.056 66.667 11.28 0.00 40.58 4.95
291 292 2.750350 CGTTGAGGCTGAACCCCT 59.250 61.111 11.28 0.00 40.58 4.79
292 293 1.672356 CGTTGAGGCTGAACCCCTG 60.672 63.158 11.28 0.00 40.58 4.45
293 294 1.973812 GTTGAGGCTGAACCCCTGC 60.974 63.158 5.45 0.00 40.58 4.85
310 311 2.594303 CCGGTGCTGGCAGTTTCA 60.594 61.111 17.16 2.48 0.00 2.69
311 312 2.620112 CCGGTGCTGGCAGTTTCAG 61.620 63.158 17.16 7.49 35.49 3.02
312 313 1.893808 CGGTGCTGGCAGTTTCAGT 60.894 57.895 17.16 0.00 34.89 3.41
313 314 1.656441 GGTGCTGGCAGTTTCAGTG 59.344 57.895 17.16 0.00 34.89 3.66
314 315 1.656441 GTGCTGGCAGTTTCAGTGG 59.344 57.895 17.16 0.00 34.89 4.00
315 316 2.195567 TGCTGGCAGTTTCAGTGGC 61.196 57.895 17.16 0.00 43.62 5.01
316 317 2.949106 CTGGCAGTTTCAGTGGCG 59.051 61.111 6.28 0.00 45.99 5.69
317 318 3.259425 CTGGCAGTTTCAGTGGCGC 62.259 63.158 6.28 0.00 45.99 6.53
318 319 4.043200 GGCAGTTTCAGTGGCGCC 62.043 66.667 22.73 22.73 34.34 6.53
319 320 4.389576 GCAGTTTCAGTGGCGCCG 62.390 66.667 23.90 7.87 0.00 6.46
320 321 2.972505 CAGTTTCAGTGGCGCCGT 60.973 61.111 23.90 8.97 0.00 5.68
321 322 2.972505 AGTTTCAGTGGCGCCGTG 60.973 61.111 23.90 21.70 0.00 4.94
322 323 4.025401 GTTTCAGTGGCGCCGTGG 62.025 66.667 23.90 13.52 0.00 4.94
323 324 4.243008 TTTCAGTGGCGCCGTGGA 62.243 61.111 23.90 14.23 0.00 4.02
324 325 3.758973 TTTCAGTGGCGCCGTGGAA 62.759 57.895 23.90 19.70 0.00 3.53
325 326 3.758973 TTCAGTGGCGCCGTGGAAA 62.759 57.895 23.90 10.08 0.00 3.13
326 327 4.025401 CAGTGGCGCCGTGGAAAC 62.025 66.667 23.90 13.46 0.00 2.78
332 333 4.992511 CGCCGTGGAAACCGGGAA 62.993 66.667 6.32 0.00 42.28 3.97
333 334 3.359523 GCCGTGGAAACCGGGAAC 61.360 66.667 6.32 0.00 42.28 3.62
349 350 2.596862 GGGAACGTTTGCGATATTTTGC 59.403 45.455 0.46 0.00 42.00 3.68
350 351 3.238441 GGAACGTTTGCGATATTTTGCA 58.762 40.909 0.46 0.00 40.61 4.08
360 361 5.771469 TGCGATATTTTGCAATAATCAGGG 58.229 37.500 0.00 0.00 39.36 4.45
361 362 5.163513 GCGATATTTTGCAATAATCAGGGG 58.836 41.667 0.00 0.00 32.00 4.79
362 363 5.278957 GCGATATTTTGCAATAATCAGGGGT 60.279 40.000 0.00 0.00 32.00 4.95
363 364 6.151691 CGATATTTTGCAATAATCAGGGGTG 58.848 40.000 0.00 0.00 0.00 4.61
364 365 6.239008 CGATATTTTGCAATAATCAGGGGTGT 60.239 38.462 0.00 0.00 0.00 4.16
365 366 5.760484 ATTTTGCAATAATCAGGGGTGTT 57.240 34.783 0.00 0.00 0.00 3.32
366 367 4.799564 TTTGCAATAATCAGGGGTGTTC 57.200 40.909 0.00 0.00 0.00 3.18
367 368 3.448093 TGCAATAATCAGGGGTGTTCA 57.552 42.857 0.00 0.00 0.00 3.18
368 369 3.979911 TGCAATAATCAGGGGTGTTCAT 58.020 40.909 0.00 0.00 0.00 2.57
369 370 3.700539 TGCAATAATCAGGGGTGTTCATG 59.299 43.478 0.00 0.00 0.00 3.07
370 371 3.491447 GCAATAATCAGGGGTGTTCATGC 60.491 47.826 0.00 0.00 0.00 4.06
371 372 2.435372 TAATCAGGGGTGTTCATGCC 57.565 50.000 0.00 0.00 0.00 4.40
372 373 0.680921 AATCAGGGGTGTTCATGCCG 60.681 55.000 0.00 0.00 0.00 5.69
373 374 1.852157 ATCAGGGGTGTTCATGCCGT 61.852 55.000 0.00 0.00 0.00 5.68
374 375 1.195442 TCAGGGGTGTTCATGCCGTA 61.195 55.000 0.00 0.00 0.00 4.02
375 376 0.744414 CAGGGGTGTTCATGCCGTAG 60.744 60.000 0.00 0.00 0.00 3.51
376 377 0.907704 AGGGGTGTTCATGCCGTAGA 60.908 55.000 0.00 0.00 0.00 2.59
377 378 0.743345 GGGGTGTTCATGCCGTAGAC 60.743 60.000 0.00 0.00 0.00 2.59
378 379 0.036765 GGGTGTTCATGCCGTAGACA 60.037 55.000 0.00 0.00 0.00 3.41
379 380 1.609580 GGGTGTTCATGCCGTAGACAA 60.610 52.381 0.00 0.00 0.00 3.18
380 381 1.463444 GGTGTTCATGCCGTAGACAAC 59.537 52.381 0.00 0.00 0.00 3.32
381 382 2.413837 GTGTTCATGCCGTAGACAACT 58.586 47.619 0.00 0.00 0.00 3.16
382 383 2.806244 GTGTTCATGCCGTAGACAACTT 59.194 45.455 0.00 0.00 0.00 2.66
383 384 3.064207 TGTTCATGCCGTAGACAACTTC 58.936 45.455 0.00 0.00 0.00 3.01
384 385 3.064207 GTTCATGCCGTAGACAACTTCA 58.936 45.455 0.00 0.00 0.00 3.02
385 386 2.683968 TCATGCCGTAGACAACTTCAC 58.316 47.619 0.00 0.00 0.00 3.18
386 387 2.299013 TCATGCCGTAGACAACTTCACT 59.701 45.455 0.00 0.00 0.00 3.41
387 388 3.508402 TCATGCCGTAGACAACTTCACTA 59.492 43.478 0.00 0.00 0.00 2.74
388 389 4.021807 TCATGCCGTAGACAACTTCACTAA 60.022 41.667 0.00 0.00 0.00 2.24
389 390 4.530710 TGCCGTAGACAACTTCACTAAT 57.469 40.909 0.00 0.00 0.00 1.73
390 391 5.648178 TGCCGTAGACAACTTCACTAATA 57.352 39.130 0.00 0.00 0.00 0.98
391 392 5.404946 TGCCGTAGACAACTTCACTAATAC 58.595 41.667 0.00 0.00 0.00 1.89
392 393 4.802563 GCCGTAGACAACTTCACTAATACC 59.197 45.833 0.00 0.00 0.00 2.73
393 394 5.393896 GCCGTAGACAACTTCACTAATACCT 60.394 44.000 0.00 0.00 0.00 3.08
394 395 6.034591 CCGTAGACAACTTCACTAATACCTG 58.965 44.000 0.00 0.00 0.00 4.00
395 396 6.349944 CCGTAGACAACTTCACTAATACCTGT 60.350 42.308 0.00 0.00 0.00 4.00
396 397 7.148188 CCGTAGACAACTTCACTAATACCTGTA 60.148 40.741 0.00 0.00 0.00 2.74
397 398 8.404000 CGTAGACAACTTCACTAATACCTGTAT 58.596 37.037 0.00 0.00 0.00 2.29
400 401 8.414778 AGACAACTTCACTAATACCTGTATAGC 58.585 37.037 0.00 0.00 0.00 2.97
401 402 8.074613 ACAACTTCACTAATACCTGTATAGCA 57.925 34.615 0.00 0.00 0.00 3.49
402 403 8.705594 ACAACTTCACTAATACCTGTATAGCAT 58.294 33.333 0.00 0.00 0.00 3.79
405 406 9.809395 ACTTCACTAATACCTGTATAGCATAGA 57.191 33.333 0.00 0.00 0.00 1.98
407 408 9.582648 TTCACTAATACCTGTATAGCATAGACA 57.417 33.333 0.00 0.00 41.03 3.41
408 409 9.011095 TCACTAATACCTGTATAGCATAGACAC 57.989 37.037 0.00 0.00 37.96 3.67
409 410 8.244802 CACTAATACCTGTATAGCATAGACACC 58.755 40.741 0.00 0.00 37.96 4.16
410 411 6.607004 AATACCTGTATAGCATAGACACCC 57.393 41.667 0.00 0.00 37.96 4.61
411 412 3.923648 ACCTGTATAGCATAGACACCCA 58.076 45.455 0.00 0.00 37.96 4.51
412 413 4.493618 ACCTGTATAGCATAGACACCCAT 58.506 43.478 0.00 0.00 37.96 4.00
413 414 4.284490 ACCTGTATAGCATAGACACCCATG 59.716 45.833 0.00 0.00 37.96 3.66
414 415 4.284490 CCTGTATAGCATAGACACCCATGT 59.716 45.833 0.00 0.00 37.96 3.21
415 416 5.221722 CCTGTATAGCATAGACACCCATGTT 60.222 44.000 0.00 0.00 37.96 2.71
416 417 6.247229 TGTATAGCATAGACACCCATGTTT 57.753 37.500 0.00 0.00 37.96 2.83
417 418 6.658849 TGTATAGCATAGACACCCATGTTTT 58.341 36.000 0.00 0.00 37.96 2.43
418 419 7.116075 TGTATAGCATAGACACCCATGTTTTT 58.884 34.615 0.00 0.00 37.96 1.94
439 440 6.576662 TTTTGCCGGATAATTCTAAACACA 57.423 33.333 5.05 0.00 0.00 3.72
440 441 6.576662 TTTGCCGGATAATTCTAAACACAA 57.423 33.333 5.05 0.00 0.00 3.33
441 442 5.811399 TGCCGGATAATTCTAAACACAAG 57.189 39.130 5.05 0.00 0.00 3.16
442 443 4.638421 TGCCGGATAATTCTAAACACAAGG 59.362 41.667 5.05 0.00 0.00 3.61
443 444 4.879545 GCCGGATAATTCTAAACACAAGGA 59.120 41.667 5.05 0.00 0.00 3.36
444 445 5.220796 GCCGGATAATTCTAAACACAAGGAC 60.221 44.000 5.05 0.00 0.00 3.85
445 446 5.006358 CCGGATAATTCTAAACACAAGGACG 59.994 44.000 0.00 0.00 0.00 4.79
446 447 5.808540 CGGATAATTCTAAACACAAGGACGA 59.191 40.000 0.00 0.00 0.00 4.20
447 448 6.479001 CGGATAATTCTAAACACAAGGACGAT 59.521 38.462 0.00 0.00 0.00 3.73
448 449 7.011109 CGGATAATTCTAAACACAAGGACGATT 59.989 37.037 0.00 0.00 0.00 3.34
449 450 9.321562 GGATAATTCTAAACACAAGGACGATTA 57.678 33.333 0.00 0.00 0.00 1.75
452 453 6.417191 TTCTAAACACAAGGACGATTATGC 57.583 37.500 0.00 0.00 0.00 3.14
453 454 5.483811 TCTAAACACAAGGACGATTATGCA 58.516 37.500 0.00 0.00 0.00 3.96
454 455 4.685169 AAACACAAGGACGATTATGCAG 57.315 40.909 0.00 0.00 0.00 4.41
455 456 2.632377 ACACAAGGACGATTATGCAGG 58.368 47.619 0.00 0.00 0.00 4.85
456 457 2.236146 ACACAAGGACGATTATGCAGGA 59.764 45.455 0.00 0.00 0.00 3.86
457 458 3.118261 ACACAAGGACGATTATGCAGGAT 60.118 43.478 0.00 0.00 0.00 3.24
458 459 3.879295 CACAAGGACGATTATGCAGGATT 59.121 43.478 0.00 0.00 0.00 3.01
459 460 4.024556 CACAAGGACGATTATGCAGGATTC 60.025 45.833 0.00 0.00 0.00 2.52
460 461 4.129380 CAAGGACGATTATGCAGGATTCA 58.871 43.478 0.00 0.00 0.00 2.57
461 462 3.733337 AGGACGATTATGCAGGATTCAC 58.267 45.455 0.00 0.00 0.00 3.18
462 463 2.476619 GGACGATTATGCAGGATTCACG 59.523 50.000 0.00 0.00 0.00 4.35
463 464 3.381045 GACGATTATGCAGGATTCACGA 58.619 45.455 0.00 0.00 0.00 4.35
464 465 3.384668 ACGATTATGCAGGATTCACGAG 58.615 45.455 0.00 0.00 0.00 4.18
465 466 2.156504 CGATTATGCAGGATTCACGAGC 59.843 50.000 0.00 0.00 0.00 5.03
466 467 1.953559 TTATGCAGGATTCACGAGCC 58.046 50.000 0.00 0.00 0.00 4.70
693 694 2.527442 GTCCGTTGTTCTAGCATTGC 57.473 50.000 0.00 0.00 0.00 3.56
694 695 2.076863 GTCCGTTGTTCTAGCATTGCT 58.923 47.619 16.63 16.63 43.41 3.91
695 696 2.094417 GTCCGTTGTTCTAGCATTGCTC 59.906 50.000 15.81 0.90 40.44 4.26
696 697 2.028112 TCCGTTGTTCTAGCATTGCTCT 60.028 45.455 15.81 0.00 40.44 4.09
697 698 2.744202 CCGTTGTTCTAGCATTGCTCTT 59.256 45.455 15.81 0.00 40.44 2.85
698 699 3.189287 CCGTTGTTCTAGCATTGCTCTTT 59.811 43.478 15.81 0.00 40.44 2.52
699 700 4.320494 CCGTTGTTCTAGCATTGCTCTTTT 60.320 41.667 15.81 0.00 40.44 2.27
700 701 5.215160 CGTTGTTCTAGCATTGCTCTTTTT 58.785 37.500 15.81 0.00 40.44 1.94
720 721 5.699097 TTTTGCCACACTGGTAGTATTTC 57.301 39.130 0.00 0.00 40.46 2.17
721 722 2.967362 TGCCACACTGGTAGTATTTCG 58.033 47.619 0.00 0.00 40.46 3.46
722 723 2.277084 GCCACACTGGTAGTATTTCGG 58.723 52.381 0.00 0.00 40.46 4.30
723 724 2.354403 GCCACACTGGTAGTATTTCGGT 60.354 50.000 0.00 0.00 40.46 4.69
724 725 3.867216 GCCACACTGGTAGTATTTCGGTT 60.867 47.826 0.00 0.00 40.46 4.44
725 726 4.320870 CCACACTGGTAGTATTTCGGTTT 58.679 43.478 0.00 0.00 31.35 3.27
726 727 4.390909 CCACACTGGTAGTATTTCGGTTTC 59.609 45.833 0.00 0.00 31.35 2.78
727 728 4.992319 CACACTGGTAGTATTTCGGTTTCA 59.008 41.667 0.00 0.00 0.00 2.69
728 729 5.120208 CACACTGGTAGTATTTCGGTTTCAG 59.880 44.000 0.00 0.00 0.00 3.02
729 730 5.011329 ACACTGGTAGTATTTCGGTTTCAGA 59.989 40.000 0.00 0.00 0.00 3.27
730 731 5.577164 CACTGGTAGTATTTCGGTTTCAGAG 59.423 44.000 0.00 0.00 0.00 3.35
731 732 5.245526 ACTGGTAGTATTTCGGTTTCAGAGT 59.754 40.000 0.00 0.00 0.00 3.24
732 733 5.717119 TGGTAGTATTTCGGTTTCAGAGTC 58.283 41.667 0.00 0.00 0.00 3.36
733 734 4.797349 GGTAGTATTTCGGTTTCAGAGTCG 59.203 45.833 0.00 0.00 0.00 4.18
734 735 4.778534 AGTATTTCGGTTTCAGAGTCGA 57.221 40.909 0.00 0.00 0.00 4.20
735 736 4.483311 AGTATTTCGGTTTCAGAGTCGAC 58.517 43.478 7.70 7.70 0.00 4.20
736 737 2.875087 TTTCGGTTTCAGAGTCGACA 57.125 45.000 19.50 0.00 0.00 4.35
737 738 2.129823 TTCGGTTTCAGAGTCGACAC 57.870 50.000 19.50 12.15 0.00 3.67
738 739 0.313043 TCGGTTTCAGAGTCGACACC 59.687 55.000 19.50 13.98 33.23 4.16
739 740 0.031585 CGGTTTCAGAGTCGACACCA 59.968 55.000 19.50 0.00 35.80 4.17
740 741 1.499049 GGTTTCAGAGTCGACACCAC 58.501 55.000 19.50 6.17 36.05 4.16
741 742 1.068741 GGTTTCAGAGTCGACACCACT 59.931 52.381 19.50 8.42 36.05 4.00
742 743 2.295349 GGTTTCAGAGTCGACACCACTA 59.705 50.000 19.50 0.00 36.05 2.74
743 744 3.243636 GGTTTCAGAGTCGACACCACTAA 60.244 47.826 19.50 1.74 36.05 2.24
744 745 4.557205 GTTTCAGAGTCGACACCACTAAT 58.443 43.478 19.50 0.00 0.00 1.73
745 746 4.866508 TTCAGAGTCGACACCACTAATT 57.133 40.909 19.50 0.00 0.00 1.40
746 747 4.866508 TCAGAGTCGACACCACTAATTT 57.133 40.909 19.50 0.00 0.00 1.82
747 748 5.209818 TCAGAGTCGACACCACTAATTTT 57.790 39.130 19.50 0.00 0.00 1.82
748 749 5.607477 TCAGAGTCGACACCACTAATTTTT 58.393 37.500 19.50 0.00 0.00 1.94
769 770 5.917541 TTTTTGATAACTGAGTCGACACC 57.082 39.130 19.50 9.65 0.00 4.16
770 771 4.594123 TTTGATAACTGAGTCGACACCA 57.406 40.909 19.50 13.86 0.00 4.17
771 772 3.570926 TGATAACTGAGTCGACACCAC 57.429 47.619 19.50 6.72 0.00 4.16
772 773 3.154710 TGATAACTGAGTCGACACCACT 58.845 45.455 19.50 0.00 0.00 4.00
773 774 4.329392 TGATAACTGAGTCGACACCACTA 58.671 43.478 19.50 7.68 0.00 2.74
774 775 4.763279 TGATAACTGAGTCGACACCACTAA 59.237 41.667 19.50 0.00 0.00 2.24
775 776 5.417894 TGATAACTGAGTCGACACCACTAAT 59.582 40.000 19.50 2.68 0.00 1.73
776 777 4.602340 AACTGAGTCGACACCACTAATT 57.398 40.909 19.50 0.00 0.00 1.40
777 778 5.717078 AACTGAGTCGACACCACTAATTA 57.283 39.130 19.50 0.00 0.00 1.40
778 779 5.916661 ACTGAGTCGACACCACTAATTAT 57.083 39.130 19.50 0.00 0.00 1.28
779 780 5.892568 ACTGAGTCGACACCACTAATTATC 58.107 41.667 19.50 2.14 0.00 1.75
780 781 5.652891 ACTGAGTCGACACCACTAATTATCT 59.347 40.000 19.50 0.00 0.00 1.98
781 782 6.827251 ACTGAGTCGACACCACTAATTATCTA 59.173 38.462 19.50 0.00 0.00 1.98
782 783 7.502895 ACTGAGTCGACACCACTAATTATCTAT 59.497 37.037 19.50 0.00 0.00 1.98
783 784 8.913487 TGAGTCGACACCACTAATTATCTATA 57.087 34.615 19.50 0.00 0.00 1.31
784 785 8.781196 TGAGTCGACACCACTAATTATCTATAC 58.219 37.037 19.50 0.00 0.00 1.47
785 786 7.804712 AGTCGACACCACTAATTATCTATACG 58.195 38.462 19.50 0.00 0.00 3.06
786 787 7.443575 AGTCGACACCACTAATTATCTATACGT 59.556 37.037 19.50 0.00 0.00 3.57
787 788 8.712363 GTCGACACCACTAATTATCTATACGTA 58.288 37.037 11.55 0.00 0.00 3.57
788 789 8.712363 TCGACACCACTAATTATCTATACGTAC 58.288 37.037 0.00 0.00 0.00 3.67
789 790 8.498358 CGACACCACTAATTATCTATACGTACA 58.502 37.037 0.00 0.00 0.00 2.90
808 809 8.134905 ACGTACAAAAGTTTTTCTACTAGTGG 57.865 34.615 5.39 1.87 0.00 4.00
809 810 7.765819 ACGTACAAAAGTTTTTCTACTAGTGGT 59.234 33.333 5.39 0.00 0.00 4.16
810 811 8.606602 CGTACAAAAGTTTTTCTACTAGTGGTT 58.393 33.333 5.39 0.00 0.00 3.67
811 812 9.712359 GTACAAAAGTTTTTCTACTAGTGGTTG 57.288 33.333 5.39 3.22 0.00 3.77
812 813 8.344446 ACAAAAGTTTTTCTACTAGTGGTTGT 57.656 30.769 5.39 3.86 0.00 3.32
813 814 8.799367 ACAAAAGTTTTTCTACTAGTGGTTGTT 58.201 29.630 5.39 0.00 0.00 2.83
814 815 9.634163 CAAAAGTTTTTCTACTAGTGGTTGTTT 57.366 29.630 5.39 0.00 0.00 2.83
836 837 6.463995 TTTTTGTTGCAGTTGGATTCTACT 57.536 33.333 0.00 0.00 0.00 2.57
837 838 7.575414 TTTTTGTTGCAGTTGGATTCTACTA 57.425 32.000 0.00 0.00 0.00 1.82
838 839 6.801539 TTTGTTGCAGTTGGATTCTACTAG 57.198 37.500 0.00 0.00 0.00 2.57
839 840 5.483685 TGTTGCAGTTGGATTCTACTAGT 57.516 39.130 0.00 0.00 0.00 2.57
840 841 5.237815 TGTTGCAGTTGGATTCTACTAGTG 58.762 41.667 5.39 0.00 0.00 2.74
841 842 4.471904 TGCAGTTGGATTCTACTAGTGG 57.528 45.455 5.39 1.87 0.00 4.00
842 843 3.838317 TGCAGTTGGATTCTACTAGTGGT 59.162 43.478 5.39 0.00 0.00 4.16
853 854 6.512342 TTCTACTAGTGGTTGTTAGAGCTC 57.488 41.667 5.27 5.27 0.00 4.09
896 904 6.590234 TGGCTATGAATATTTCTAGAGCGA 57.410 37.500 8.61 3.66 33.25 4.93
899 907 7.123397 TGGCTATGAATATTTCTAGAGCGAGAT 59.877 37.037 8.61 0.00 33.25 2.75
918 927 6.624642 GCGAGATATGTTCTGCTGATCTCATA 60.625 42.308 16.57 14.34 41.67 2.15
926 935 8.828688 TGTTCTGCTGATCTCATATCATTTAG 57.171 34.615 0.00 0.00 0.00 1.85
959 974 4.494350 TCTTACCACTACGTGTCACTTC 57.506 45.455 0.00 0.00 0.00 3.01
965 980 3.869246 CCACTACGTGTCACTTCTTTTGT 59.131 43.478 0.00 0.00 0.00 2.83
973 988 3.949113 TGTCACTTCTTTTGTGGGTTACC 59.051 43.478 0.00 0.00 36.21 2.85
1479 1507 0.180642 AGATCTGCATGGTGGAGCTG 59.819 55.000 0.00 0.00 35.65 4.24
1533 1561 4.166539 CCATCAGGGATAGTGAGATCCTT 58.833 47.826 2.62 0.00 44.35 3.36
1539 1567 3.977326 GGGATAGTGAGATCCTTTCCCTT 59.023 47.826 14.62 0.00 43.22 3.95
1554 1582 2.262637 TCCCTTGTTAGGAATGTCCGT 58.737 47.619 0.00 0.00 45.05 4.69
1767 1834 0.891904 TCGTGGATGTCGTCACTGGA 60.892 55.000 0.00 0.00 0.00 3.86
1993 2060 6.887626 TCATAGTGGTAAAGTGTTTTTCCC 57.112 37.500 0.00 0.00 33.98 3.97
2017 2084 4.831107 TGAAAGATTCACATGGTCGATGA 58.169 39.130 1.37 0.00 35.80 2.92
2031 2098 5.599732 TGGTCGATGAGTAGAGTAGTACTC 58.400 45.833 20.73 20.73 46.34 2.59
2032 2099 7.953188 CATGGTCGATGAGTAGAGTAGTACTCT 60.953 44.444 30.54 30.54 46.32 3.24
2064 2136 9.611284 TGTTATTTTTCTGATTCATGTTCTTCG 57.389 29.630 0.00 0.00 0.00 3.79
2102 2174 2.471815 AGGATATGTTCACGGGAGGA 57.528 50.000 0.00 0.00 0.00 3.71
2123 2195 1.276138 ACCGAGACAACATCATCAGCA 59.724 47.619 0.00 0.00 0.00 4.41
2126 2198 2.630158 GAGACAACATCATCAGCAGCT 58.370 47.619 0.00 0.00 0.00 4.24
2283 2355 1.566298 GGTGAAGGAGGGCATGAGGT 61.566 60.000 0.00 0.00 0.00 3.85
2318 2390 2.646175 GCTCCTGCTCCCACGTGTA 61.646 63.158 15.65 0.86 36.03 2.90
2383 2455 3.168773 CCAGGGTCATGGTTAACGG 57.831 57.895 0.00 0.00 35.47 4.44
2645 2717 0.824109 ACATGGACATGATCGTCGGT 59.176 50.000 18.38 0.00 41.20 4.69
2705 2777 2.108250 AGCGCCCTATAATGTCCCAATT 59.892 45.455 2.29 0.00 0.00 2.32
2726 2798 7.201461 CCAATTGATCTTTAAAGCCGATGTTTG 60.201 37.037 10.51 7.86 0.00 2.93
2727 2799 5.957842 TGATCTTTAAAGCCGATGTTTGT 57.042 34.783 10.51 0.00 0.00 2.83
2728 2800 6.325919 TGATCTTTAAAGCCGATGTTTGTT 57.674 33.333 10.51 0.00 0.00 2.83
2729 2801 6.744112 TGATCTTTAAAGCCGATGTTTGTTT 58.256 32.000 10.51 0.00 0.00 2.83
2730 2802 7.206687 TGATCTTTAAAGCCGATGTTTGTTTT 58.793 30.769 10.51 0.00 0.00 2.43
2731 2803 7.708752 TGATCTTTAAAGCCGATGTTTGTTTTT 59.291 29.630 10.51 0.00 0.00 1.94
2751 2823 3.596310 TTTTATTGCGGGGTTAAAGCC 57.404 42.857 0.00 0.00 34.31 4.35
2752 2824 1.096416 TTATTGCGGGGTTAAAGCCG 58.904 50.000 0.00 0.00 36.39 5.52
2753 2825 0.252479 TATTGCGGGGTTAAAGCCGA 59.748 50.000 0.00 0.00 36.39 5.54
2754 2826 0.395173 ATTGCGGGGTTAAAGCCGAT 60.395 50.000 0.00 0.00 36.39 4.18
2755 2827 1.309499 TTGCGGGGTTAAAGCCGATG 61.309 55.000 0.00 0.00 36.39 3.84
2756 2828 1.747745 GCGGGGTTAAAGCCGATGT 60.748 57.895 0.00 0.00 36.39 3.06
2757 2829 1.310216 GCGGGGTTAAAGCCGATGTT 61.310 55.000 0.00 0.00 36.39 2.71
2758 2830 1.170442 CGGGGTTAAAGCCGATGTTT 58.830 50.000 0.00 0.00 36.39 2.83
2799 2872 2.762327 GTTCTGCCATGTGGGATGAATT 59.238 45.455 0.54 0.00 40.01 2.17
2804 2877 3.953612 TGCCATGTGGGATGAATTTCTAC 59.046 43.478 0.54 0.00 40.01 2.59
2995 3079 1.207791 GAGGATTTGGAGCTCCTGGA 58.792 55.000 32.28 18.44 42.02 3.86
3034 3120 1.140134 ACATTACTGGGTGCAGGGGT 61.140 55.000 0.00 0.00 0.00 4.95
3067 3154 1.992277 CTGAGTGGGTGCCTAGCCT 60.992 63.158 0.00 0.00 44.88 4.58
3159 3249 9.875708 AATTGTATAATAAATGCCCTAACTCCA 57.124 29.630 0.00 0.00 0.00 3.86
3191 3281 4.867086 CCCCCACTCCACACTAAAATATT 58.133 43.478 0.00 0.00 0.00 1.28
3218 3308 6.742559 TCCTACTCTCCCGCTAAAATATTT 57.257 37.500 0.00 0.00 0.00 1.40
3219 3309 7.844493 TCCTACTCTCCCGCTAAAATATTTA 57.156 36.000 0.01 0.00 0.00 1.40
3220 3310 7.893658 TCCTACTCTCCCGCTAAAATATTTAG 58.106 38.462 0.01 5.67 0.00 1.85
3221 3311 7.039223 TCCTACTCTCCCGCTAAAATATTTAGG 60.039 40.741 0.01 3.46 0.00 2.69
3222 3312 5.866207 ACTCTCCCGCTAAAATATTTAGGG 58.134 41.667 17.86 17.86 38.73 3.53
3223 3313 4.648651 TCTCCCGCTAAAATATTTAGGGC 58.351 43.478 18.60 13.93 37.36 5.19
3224 3314 3.404899 TCCCGCTAAAATATTTAGGGCG 58.595 45.455 23.27 23.27 40.64 6.13
3225 3315 3.143728 CCCGCTAAAATATTTAGGGCGT 58.856 45.455 25.65 7.13 39.57 5.68
3226 3316 3.058501 CCCGCTAAAATATTTAGGGCGTG 60.059 47.826 25.65 18.07 39.57 5.34
3227 3317 3.058501 CCGCTAAAATATTTAGGGCGTGG 60.059 47.826 25.65 15.81 39.57 4.94
3228 3318 3.608474 CGCTAAAATATTTAGGGCGTGGC 60.608 47.826 22.54 11.54 37.03 5.01
3229 3319 3.568430 GCTAAAATATTTAGGGCGTGGCT 59.432 43.478 0.01 0.00 0.00 4.75
3230 3320 4.758165 GCTAAAATATTTAGGGCGTGGCTA 59.242 41.667 0.01 0.00 0.00 3.93
3231 3321 5.106673 GCTAAAATATTTAGGGCGTGGCTAG 60.107 44.000 0.01 0.00 0.00 3.42
3232 3322 3.418684 AATATTTAGGGCGTGGCTAGG 57.581 47.619 0.00 0.00 0.00 3.02
3233 3323 1.797320 TATTTAGGGCGTGGCTAGGT 58.203 50.000 0.00 0.00 0.00 3.08
3234 3324 0.468648 ATTTAGGGCGTGGCTAGGTC 59.531 55.000 0.00 0.00 0.00 3.85
3235 3325 0.616679 TTTAGGGCGTGGCTAGGTCT 60.617 55.000 0.00 0.00 0.00 3.85
3236 3326 1.041447 TTAGGGCGTGGCTAGGTCTC 61.041 60.000 0.00 0.00 0.00 3.36
3237 3327 4.208686 GGGCGTGGCTAGGTCTCG 62.209 72.222 0.00 0.00 0.00 4.04
3238 3328 4.208686 GGCGTGGCTAGGTCTCGG 62.209 72.222 0.00 0.00 0.00 4.63
3239 3329 3.450115 GCGTGGCTAGGTCTCGGT 61.450 66.667 0.00 0.00 0.00 4.69
3240 3330 2.799371 CGTGGCTAGGTCTCGGTC 59.201 66.667 0.00 0.00 0.00 4.79
3241 3331 2.044555 CGTGGCTAGGTCTCGGTCA 61.045 63.158 0.00 0.00 0.00 4.02
3242 3332 1.592400 CGTGGCTAGGTCTCGGTCAA 61.592 60.000 0.00 0.00 0.00 3.18
3243 3333 0.108756 GTGGCTAGGTCTCGGTCAAC 60.109 60.000 0.00 0.00 0.00 3.18
3244 3334 0.251653 TGGCTAGGTCTCGGTCAACT 60.252 55.000 0.00 0.00 0.00 3.16
3245 3335 0.173708 GGCTAGGTCTCGGTCAACTG 59.826 60.000 0.00 0.00 0.00 3.16
3246 3336 0.173708 GCTAGGTCTCGGTCAACTGG 59.826 60.000 0.00 0.00 0.00 4.00
3247 3337 0.818296 CTAGGTCTCGGTCAACTGGG 59.182 60.000 0.00 0.00 0.00 4.45
3248 3338 0.406750 TAGGTCTCGGTCAACTGGGA 59.593 55.000 0.00 0.00 0.00 4.37
3249 3339 4.990288 GTCTCGGTCAACTGGGAC 57.010 61.111 6.24 6.24 44.56 4.46
3250 3340 2.352817 GTCTCGGTCAACTGGGACT 58.647 57.895 13.63 0.00 46.65 3.85
3251 3341 0.680061 GTCTCGGTCAACTGGGACTT 59.320 55.000 13.63 0.00 46.65 3.01
3252 3342 1.891150 GTCTCGGTCAACTGGGACTTA 59.109 52.381 13.63 0.00 46.65 2.24
3253 3343 2.298163 GTCTCGGTCAACTGGGACTTAA 59.702 50.000 13.63 0.00 46.65 1.85
3254 3344 2.298163 TCTCGGTCAACTGGGACTTAAC 59.702 50.000 0.00 0.00 37.91 2.01
3255 3345 1.345415 TCGGTCAACTGGGACTTAACC 59.655 52.381 0.00 0.00 37.91 2.85
3256 3346 1.071071 CGGTCAACTGGGACTTAACCA 59.929 52.381 0.00 0.00 37.91 3.67
3257 3347 2.485835 CGGTCAACTGGGACTTAACCAA 60.486 50.000 0.00 0.00 37.59 3.67
3258 3348 3.146847 GGTCAACTGGGACTTAACCAAG 58.853 50.000 0.00 0.00 37.59 3.61
3270 3360 5.615925 ACTTAACCAAGTCTCAGTCAAGT 57.384 39.130 0.00 0.00 41.25 3.16
3271 3361 5.360591 ACTTAACCAAGTCTCAGTCAAGTG 58.639 41.667 0.00 0.00 41.25 3.16
3272 3362 5.128827 ACTTAACCAAGTCTCAGTCAAGTGA 59.871 40.000 0.00 0.00 41.25 3.41
3273 3363 4.696479 AACCAAGTCTCAGTCAAGTGAT 57.304 40.909 0.00 0.00 0.00 3.06
3274 3364 5.808366 AACCAAGTCTCAGTCAAGTGATA 57.192 39.130 0.00 0.00 0.00 2.15
3275 3365 6.365970 AACCAAGTCTCAGTCAAGTGATAT 57.634 37.500 0.00 0.00 0.00 1.63
3276 3366 7.482169 AACCAAGTCTCAGTCAAGTGATATA 57.518 36.000 0.00 0.00 0.00 0.86
3277 3367 7.106439 ACCAAGTCTCAGTCAAGTGATATAG 57.894 40.000 0.00 0.00 0.00 1.31
3278 3368 5.982516 CCAAGTCTCAGTCAAGTGATATAGC 59.017 44.000 0.00 0.00 0.00 2.97
3279 3369 6.406288 CCAAGTCTCAGTCAAGTGATATAGCA 60.406 42.308 0.00 0.00 0.00 3.49
3280 3370 6.975196 AGTCTCAGTCAAGTGATATAGCAT 57.025 37.500 0.00 0.00 0.00 3.79
3281 3371 6.747125 AGTCTCAGTCAAGTGATATAGCATG 58.253 40.000 0.00 0.00 0.00 4.06
3282 3372 6.323482 AGTCTCAGTCAAGTGATATAGCATGT 59.677 38.462 0.00 0.00 0.00 3.21
3283 3373 7.503902 AGTCTCAGTCAAGTGATATAGCATGTA 59.496 37.037 0.00 0.00 0.00 2.29
3284 3374 7.807433 GTCTCAGTCAAGTGATATAGCATGTAG 59.193 40.741 0.00 0.00 0.00 2.74
3285 3375 7.721399 TCTCAGTCAAGTGATATAGCATGTAGA 59.279 37.037 0.00 0.00 0.00 2.59
3286 3376 8.237811 TCAGTCAAGTGATATAGCATGTAGAA 57.762 34.615 0.00 0.00 0.00 2.10
3287 3377 8.695456 TCAGTCAAGTGATATAGCATGTAGAAA 58.305 33.333 0.00 0.00 0.00 2.52
3288 3378 8.976471 CAGTCAAGTGATATAGCATGTAGAAAG 58.024 37.037 0.00 0.00 0.00 2.62
3289 3379 8.918116 AGTCAAGTGATATAGCATGTAGAAAGA 58.082 33.333 0.00 0.00 0.00 2.52
3290 3380 9.534565 GTCAAGTGATATAGCATGTAGAAAGAA 57.465 33.333 0.00 0.00 0.00 2.52
3338 3428 8.970859 TTTTTCCACAAATGTCCATACAAAAT 57.029 26.923 0.00 0.00 39.58 1.82
3339 3429 8.600449 TTTTCCACAAATGTCCATACAAAATC 57.400 30.769 0.00 0.00 39.58 2.17
3340 3430 6.907853 TCCACAAATGTCCATACAAAATCA 57.092 33.333 0.00 0.00 39.58 2.57
3341 3431 7.295322 TCCACAAATGTCCATACAAAATCAA 57.705 32.000 0.00 0.00 39.58 2.57
3342 3432 7.730084 TCCACAAATGTCCATACAAAATCAAA 58.270 30.769 0.00 0.00 39.58 2.69
3343 3433 7.871973 TCCACAAATGTCCATACAAAATCAAAG 59.128 33.333 0.00 0.00 39.58 2.77
3344 3434 7.118101 CCACAAATGTCCATACAAAATCAAAGG 59.882 37.037 0.00 0.00 39.58 3.11
3345 3435 7.871973 CACAAATGTCCATACAAAATCAAAGGA 59.128 33.333 0.00 0.00 39.58 3.36
3346 3436 8.428063 ACAAATGTCCATACAAAATCAAAGGAA 58.572 29.630 0.00 0.00 39.58 3.36
3347 3437 8.928733 CAAATGTCCATACAAAATCAAAGGAAG 58.071 33.333 0.00 0.00 39.58 3.46
3348 3438 8.421249 AATGTCCATACAAAATCAAAGGAAGA 57.579 30.769 0.00 0.00 39.58 2.87
3349 3439 8.599624 ATGTCCATACAAAATCAAAGGAAGAT 57.400 30.769 0.00 0.00 39.58 2.40
3350 3440 9.699410 ATGTCCATACAAAATCAAAGGAAGATA 57.301 29.630 0.00 0.00 39.58 1.98
3351 3441 9.177608 TGTCCATACAAAATCAAAGGAAGATAG 57.822 33.333 0.00 0.00 30.91 2.08
3352 3442 9.178758 GTCCATACAAAATCAAAGGAAGATAGT 57.821 33.333 0.00 0.00 0.00 2.12
3358 3448 9.099454 ACAAAATCAAAGGAAGATAGTATCGAC 57.901 33.333 4.48 3.33 0.00 4.20
3359 3449 9.319143 CAAAATCAAAGGAAGATAGTATCGACT 57.681 33.333 4.48 2.13 39.92 4.18
3360 3450 8.879342 AAATCAAAGGAAGATAGTATCGACTG 57.121 34.615 4.48 0.00 36.28 3.51
3361 3451 7.825331 ATCAAAGGAAGATAGTATCGACTGA 57.175 36.000 4.48 4.30 36.28 3.41
3362 3452 7.265647 TCAAAGGAAGATAGTATCGACTGAG 57.734 40.000 4.48 2.38 36.28 3.35
3363 3453 7.054751 TCAAAGGAAGATAGTATCGACTGAGA 58.945 38.462 4.48 4.26 36.28 3.27
3364 3454 6.870971 AAGGAAGATAGTATCGACTGAGAC 57.129 41.667 4.48 0.00 36.28 3.36
3365 3455 5.931294 AGGAAGATAGTATCGACTGAGACA 58.069 41.667 4.48 0.00 38.81 3.41
3366 3456 6.539173 AGGAAGATAGTATCGACTGAGACAT 58.461 40.000 4.48 0.00 38.81 3.06
3367 3457 7.681679 AGGAAGATAGTATCGACTGAGACATA 58.318 38.462 4.48 0.00 38.81 2.29
3368 3458 8.158132 AGGAAGATAGTATCGACTGAGACATAA 58.842 37.037 4.48 0.00 38.81 1.90
3369 3459 8.231837 GGAAGATAGTATCGACTGAGACATAAC 58.768 40.741 4.48 0.00 38.81 1.89
3370 3460 8.678593 AAGATAGTATCGACTGAGACATAACA 57.321 34.615 4.48 0.00 38.81 2.41
3371 3461 8.678593 AGATAGTATCGACTGAGACATAACAA 57.321 34.615 4.48 0.00 38.81 2.83
3372 3462 9.121658 AGATAGTATCGACTGAGACATAACAAA 57.878 33.333 4.48 0.00 38.81 2.83
3373 3463 9.388346 GATAGTATCGACTGAGACATAACAAAG 57.612 37.037 0.00 0.00 38.81 2.77
3374 3464 7.392494 AGTATCGACTGAGACATAACAAAGA 57.608 36.000 0.00 0.00 38.81 2.52
3375 3465 7.251994 AGTATCGACTGAGACATAACAAAGAC 58.748 38.462 0.00 0.00 38.81 3.01
3376 3466 5.707242 TCGACTGAGACATAACAAAGACT 57.293 39.130 0.00 0.00 0.00 3.24
3377 3467 5.700846 TCGACTGAGACATAACAAAGACTC 58.299 41.667 0.00 0.00 0.00 3.36
3378 3468 5.240844 TCGACTGAGACATAACAAAGACTCA 59.759 40.000 0.00 0.00 35.76 3.41
3381 3471 6.942886 CTGAGACATAACAAAGACTCAGTC 57.057 41.667 0.00 0.00 44.16 3.51
3382 3472 5.461526 TGAGACATAACAAAGACTCAGTCG 58.538 41.667 0.00 0.00 37.67 4.18
3383 3473 5.240844 TGAGACATAACAAAGACTCAGTCGA 59.759 40.000 0.00 0.00 37.67 4.20
3384 3474 5.462405 AGACATAACAAAGACTCAGTCGAC 58.538 41.667 7.70 7.70 37.67 4.20
3385 3475 5.241949 AGACATAACAAAGACTCAGTCGACT 59.758 40.000 13.58 13.58 37.67 4.18
3386 3476 5.223382 ACATAACAAAGACTCAGTCGACTG 58.777 41.667 34.76 34.76 45.08 3.51
3400 3490 4.632740 GTCGACTGAGACTTAGCAAAAC 57.367 45.455 8.70 0.00 38.09 2.43
3401 3491 4.299978 GTCGACTGAGACTTAGCAAAACT 58.700 43.478 8.70 0.00 38.09 2.66
3402 3492 4.149046 GTCGACTGAGACTTAGCAAAACTG 59.851 45.833 8.70 0.00 38.09 3.16
3403 3493 4.037565 TCGACTGAGACTTAGCAAAACTGA 59.962 41.667 0.00 0.00 0.00 3.41
3404 3494 4.745125 CGACTGAGACTTAGCAAAACTGAA 59.255 41.667 0.00 0.00 0.00 3.02
3405 3495 5.234329 CGACTGAGACTTAGCAAAACTGAAA 59.766 40.000 0.00 0.00 0.00 2.69
3406 3496 6.073548 CGACTGAGACTTAGCAAAACTGAAAT 60.074 38.462 0.00 0.00 0.00 2.17
3407 3497 7.116376 CGACTGAGACTTAGCAAAACTGAAATA 59.884 37.037 0.00 0.00 0.00 1.40
3408 3498 8.854614 ACTGAGACTTAGCAAAACTGAAATAT 57.145 30.769 0.00 0.00 0.00 1.28
3449 3539 9.289782 AGCTCAGTGAGTCTAACAATTATTTTT 57.710 29.630 21.06 0.00 31.39 1.94
3484 3574 1.603739 AAAAGGCTTCAGACCCGCC 60.604 57.895 0.00 0.00 44.09 6.13
3495 3585 6.408206 GGCTTCAGACCCGCCTTATATATAAT 60.408 42.308 5.64 0.00 40.62 1.28
3502 3592 5.065914 CCCGCCTTATATATAATGCAGCAT 58.934 41.667 23.88 0.52 34.77 3.79
3648 3751 0.179018 AGCTCACACCCCAACAAGAC 60.179 55.000 0.00 0.00 0.00 3.01
3654 3757 1.764134 ACACCCCAACAAGACGAACTA 59.236 47.619 0.00 0.00 0.00 2.24
3828 3939 2.279502 TAGCGATGCCACTGACGTCC 62.280 60.000 14.12 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.528321 TCGATCATCATTCTAGCTCCAAAAT 58.472 36.000 0.00 0.00 0.00 1.82
1 2 5.917462 TCGATCATCATTCTAGCTCCAAAA 58.083 37.500 0.00 0.00 0.00 2.44
2 3 5.535753 TCGATCATCATTCTAGCTCCAAA 57.464 39.130 0.00 0.00 0.00 3.28
4 5 4.586421 ACTTCGATCATCATTCTAGCTCCA 59.414 41.667 0.00 0.00 0.00 3.86
5 6 5.132897 ACTTCGATCATCATTCTAGCTCC 57.867 43.478 0.00 0.00 0.00 4.70
7 8 4.517075 TCGACTTCGATCATCATTCTAGCT 59.483 41.667 0.00 0.00 44.22 3.32
8 9 4.788690 TCGACTTCGATCATCATTCTAGC 58.211 43.478 0.00 0.00 44.22 3.42
22 23 5.574082 AGATCAAACTACAGATCGACTTCG 58.426 41.667 0.00 0.00 44.10 3.79
23 24 8.912787 TTAAGATCAAACTACAGATCGACTTC 57.087 34.615 0.00 0.00 44.10 3.01
24 25 9.877178 ATTTAAGATCAAACTACAGATCGACTT 57.123 29.630 0.00 0.00 44.10 3.01
25 26 9.877178 AATTTAAGATCAAACTACAGATCGACT 57.123 29.630 0.00 0.00 44.10 4.18
26 27 9.907576 CAATTTAAGATCAAACTACAGATCGAC 57.092 33.333 0.00 0.00 44.10 4.20
27 28 9.098355 CCAATTTAAGATCAAACTACAGATCGA 57.902 33.333 0.00 0.00 44.10 3.59
28 29 7.852945 GCCAATTTAAGATCAAACTACAGATCG 59.147 37.037 0.00 0.00 44.10 3.69
29 30 8.677300 TGCCAATTTAAGATCAAACTACAGATC 58.323 33.333 0.00 0.00 40.68 2.75
30 31 8.579850 TGCCAATTTAAGATCAAACTACAGAT 57.420 30.769 0.00 0.00 0.00 2.90
31 32 7.362056 GCTGCCAATTTAAGATCAAACTACAGA 60.362 37.037 0.00 0.00 0.00 3.41
32 33 6.749118 GCTGCCAATTTAAGATCAAACTACAG 59.251 38.462 0.00 0.00 0.00 2.74
33 34 6.208402 TGCTGCCAATTTAAGATCAAACTACA 59.792 34.615 0.00 0.00 0.00 2.74
34 35 6.528072 GTGCTGCCAATTTAAGATCAAACTAC 59.472 38.462 0.00 0.00 0.00 2.73
35 36 6.620678 GTGCTGCCAATTTAAGATCAAACTA 58.379 36.000 0.00 0.00 0.00 2.24
36 37 5.473039 GTGCTGCCAATTTAAGATCAAACT 58.527 37.500 0.00 0.00 0.00 2.66
37 38 4.324402 CGTGCTGCCAATTTAAGATCAAAC 59.676 41.667 0.00 0.00 0.00 2.93
38 39 4.022416 ACGTGCTGCCAATTTAAGATCAAA 60.022 37.500 0.00 0.00 0.00 2.69
39 40 3.505680 ACGTGCTGCCAATTTAAGATCAA 59.494 39.130 0.00 0.00 0.00 2.57
40 41 3.081061 ACGTGCTGCCAATTTAAGATCA 58.919 40.909 0.00 0.00 0.00 2.92
41 42 3.764885 ACGTGCTGCCAATTTAAGATC 57.235 42.857 0.00 0.00 0.00 2.75
42 43 5.835113 ATTACGTGCTGCCAATTTAAGAT 57.165 34.783 0.00 0.00 0.00 2.40
43 44 6.935741 ATATTACGTGCTGCCAATTTAAGA 57.064 33.333 0.00 0.00 0.00 2.10
44 45 9.677567 AAATATATTACGTGCTGCCAATTTAAG 57.322 29.630 0.00 0.00 0.00 1.85
48 49 9.624697 CATAAAATATATTACGTGCTGCCAATT 57.375 29.630 0.00 0.00 0.00 2.32
49 50 8.243426 CCATAAAATATATTACGTGCTGCCAAT 58.757 33.333 0.00 0.00 0.00 3.16
50 51 7.589395 CCATAAAATATATTACGTGCTGCCAA 58.411 34.615 0.00 0.00 0.00 4.52
51 52 6.348950 GCCATAAAATATATTACGTGCTGCCA 60.349 38.462 0.00 0.00 0.00 4.92
52 53 6.027749 GCCATAAAATATATTACGTGCTGCC 58.972 40.000 0.00 0.00 0.00 4.85
53 54 6.027749 GGCCATAAAATATATTACGTGCTGC 58.972 40.000 0.00 0.00 0.00 5.25
54 55 7.139896 TGGCCATAAAATATATTACGTGCTG 57.860 36.000 0.00 0.00 0.00 4.41
55 56 7.753309 TTGGCCATAAAATATATTACGTGCT 57.247 32.000 6.09 0.00 0.00 4.40
56 57 7.428183 CGATTGGCCATAAAATATATTACGTGC 59.572 37.037 6.09 0.00 0.00 5.34
57 58 8.661257 TCGATTGGCCATAAAATATATTACGTG 58.339 33.333 6.09 0.00 0.00 4.49
58 59 8.780846 TCGATTGGCCATAAAATATATTACGT 57.219 30.769 6.09 0.00 0.00 3.57
63 64 9.466497 ACTGAATCGATTGGCCATAAAATATAT 57.534 29.630 16.96 0.00 0.00 0.86
64 65 8.729756 CACTGAATCGATTGGCCATAAAATATA 58.270 33.333 16.96 0.00 0.00 0.86
65 66 7.448161 TCACTGAATCGATTGGCCATAAAATAT 59.552 33.333 16.96 0.00 0.00 1.28
66 67 6.770303 TCACTGAATCGATTGGCCATAAAATA 59.230 34.615 16.96 0.00 0.00 1.40
67 68 5.593909 TCACTGAATCGATTGGCCATAAAAT 59.406 36.000 16.96 0.00 0.00 1.82
68 69 4.946772 TCACTGAATCGATTGGCCATAAAA 59.053 37.500 16.96 0.00 0.00 1.52
69 70 4.522114 TCACTGAATCGATTGGCCATAAA 58.478 39.130 16.96 0.00 0.00 1.40
70 71 4.149511 TCACTGAATCGATTGGCCATAA 57.850 40.909 16.96 0.00 0.00 1.90
71 72 3.836365 TCACTGAATCGATTGGCCATA 57.164 42.857 16.96 0.00 0.00 2.74
72 73 2.684881 GTTCACTGAATCGATTGGCCAT 59.315 45.455 16.96 0.00 0.00 4.40
73 74 2.083774 GTTCACTGAATCGATTGGCCA 58.916 47.619 16.96 0.00 0.00 5.36
74 75 2.359900 AGTTCACTGAATCGATTGGCC 58.640 47.619 16.96 0.00 0.00 5.36
75 76 4.631813 ACTTAGTTCACTGAATCGATTGGC 59.368 41.667 16.96 2.32 0.00 4.52
76 77 6.727824 AACTTAGTTCACTGAATCGATTGG 57.272 37.500 16.96 10.51 0.00 3.16
118 119 8.567948 ACATACGAAATGAAGTTGAACTTGATT 58.432 29.630 16.25 15.77 42.40 2.57
119 120 8.017373 CACATACGAAATGAAGTTGAACTTGAT 58.983 33.333 16.25 9.95 38.80 2.57
120 121 7.351981 CACATACGAAATGAAGTTGAACTTGA 58.648 34.615 16.25 7.61 38.80 3.02
121 122 6.086765 GCACATACGAAATGAAGTTGAACTTG 59.913 38.462 16.25 2.31 38.80 3.16
122 123 6.142817 GCACATACGAAATGAAGTTGAACTT 58.857 36.000 10.82 10.82 41.95 2.66
123 124 5.614668 CGCACATACGAAATGAAGTTGAACT 60.615 40.000 9.04 0.00 34.06 3.01
124 125 4.549599 CGCACATACGAAATGAAGTTGAAC 59.450 41.667 9.04 0.00 34.06 3.18
125 126 4.707563 CGCACATACGAAATGAAGTTGAA 58.292 39.130 9.04 0.00 34.06 2.69
126 127 3.424302 GCGCACATACGAAATGAAGTTGA 60.424 43.478 0.30 0.00 34.06 3.18
127 128 2.840176 GCGCACATACGAAATGAAGTTG 59.160 45.455 0.30 0.00 34.06 3.16
128 129 2.482336 TGCGCACATACGAAATGAAGTT 59.518 40.909 5.66 0.00 34.06 2.66
129 130 2.073056 TGCGCACATACGAAATGAAGT 58.927 42.857 5.66 0.00 34.06 3.01
130 131 2.430956 GTGCGCACATACGAAATGAAG 58.569 47.619 34.52 3.54 34.06 3.02
131 132 1.201866 CGTGCGCACATACGAAATGAA 60.202 47.619 37.03 0.00 42.54 2.57
132 133 0.368567 CGTGCGCACATACGAAATGA 59.631 50.000 37.03 0.00 42.54 2.57
133 134 0.094558 ACGTGCGCACATACGAAATG 59.905 50.000 37.03 20.86 42.54 2.32
134 135 0.094558 CACGTGCGCACATACGAAAT 59.905 50.000 37.03 10.96 42.54 2.17
135 136 1.216298 ACACGTGCGCACATACGAAA 61.216 50.000 37.03 0.00 42.54 3.46
136 137 0.386985 TACACGTGCGCACATACGAA 60.387 50.000 37.03 16.11 42.54 3.85
137 138 0.179158 ATACACGTGCGCACATACGA 60.179 50.000 37.03 19.61 42.54 3.43
138 139 1.468895 TATACACGTGCGCACATACG 58.531 50.000 37.03 26.37 45.19 3.06
139 140 5.496500 CGATTATATACACGTGCGCACATAC 60.497 44.000 37.03 13.56 0.00 2.39
140 141 4.555747 CGATTATATACACGTGCGCACATA 59.444 41.667 37.03 26.58 0.00 2.29
141 142 3.363724 CGATTATATACACGTGCGCACAT 59.636 43.478 37.03 23.73 0.00 3.21
142 143 2.722116 CGATTATATACACGTGCGCACA 59.278 45.455 37.03 20.47 0.00 4.57
143 144 2.975193 TCGATTATATACACGTGCGCAC 59.025 45.455 30.42 30.42 0.00 5.34
144 145 3.270962 TCGATTATATACACGTGCGCA 57.729 42.857 17.22 5.66 0.00 6.09
145 146 4.817987 ATTCGATTATATACACGTGCGC 57.182 40.909 17.22 0.00 0.00 6.09
146 147 8.153724 TCTAAATTCGATTATATACACGTGCG 57.846 34.615 17.22 8.57 0.00 5.34
147 148 9.125906 ACTCTAAATTCGATTATATACACGTGC 57.874 33.333 17.22 0.00 0.00 5.34
178 179 8.945057 GGCAAAAATTCTGGCAATTCTTAAATA 58.055 29.630 8.64 0.00 39.10 1.40
179 180 7.447853 TGGCAAAAATTCTGGCAATTCTTAAAT 59.552 29.630 12.62 0.00 45.35 1.40
180 181 6.769822 TGGCAAAAATTCTGGCAATTCTTAAA 59.230 30.769 12.62 0.00 45.35 1.52
181 182 6.294473 TGGCAAAAATTCTGGCAATTCTTAA 58.706 32.000 12.62 0.00 45.35 1.85
182 183 5.862845 TGGCAAAAATTCTGGCAATTCTTA 58.137 33.333 12.62 0.00 45.35 2.10
183 184 4.716794 TGGCAAAAATTCTGGCAATTCTT 58.283 34.783 12.62 0.00 45.35 2.52
184 185 4.354893 TGGCAAAAATTCTGGCAATTCT 57.645 36.364 12.62 0.00 45.35 2.40
189 190 4.885907 TCAAAATTGGCAAAAATTCTGGCA 59.114 33.333 3.01 11.38 46.51 4.92
190 191 5.435820 TCAAAATTGGCAAAAATTCTGGC 57.564 34.783 3.01 7.01 39.69 4.85
191 192 6.383415 CCATCAAAATTGGCAAAAATTCTGG 58.617 36.000 3.01 4.48 0.00 3.86
192 193 6.383415 CCCATCAAAATTGGCAAAAATTCTG 58.617 36.000 3.01 0.00 32.60 3.02
193 194 5.047872 GCCCATCAAAATTGGCAAAAATTCT 60.048 36.000 3.01 0.00 42.11 2.40
194 195 5.162794 GCCCATCAAAATTGGCAAAAATTC 58.837 37.500 3.01 0.00 42.11 2.17
195 196 5.136816 GCCCATCAAAATTGGCAAAAATT 57.863 34.783 3.01 0.00 42.11 1.82
196 197 4.787260 GCCCATCAAAATTGGCAAAAAT 57.213 36.364 3.01 0.00 42.11 1.82
202 203 6.100404 TCTATTATGCCCATCAAAATTGGC 57.900 37.500 0.00 0.00 42.71 4.52
203 204 6.268387 ACCTCTATTATGCCCATCAAAATTGG 59.732 38.462 0.00 0.00 0.00 3.16
204 205 7.294017 ACCTCTATTATGCCCATCAAAATTG 57.706 36.000 0.00 0.00 0.00 2.32
205 206 7.255590 CGAACCTCTATTATGCCCATCAAAATT 60.256 37.037 0.00 0.00 0.00 1.82
206 207 6.207417 CGAACCTCTATTATGCCCATCAAAAT 59.793 38.462 0.00 0.00 0.00 1.82
207 208 5.530915 CGAACCTCTATTATGCCCATCAAAA 59.469 40.000 0.00 0.00 0.00 2.44
208 209 5.063204 CGAACCTCTATTATGCCCATCAAA 58.937 41.667 0.00 0.00 0.00 2.69
209 210 4.504864 CCGAACCTCTATTATGCCCATCAA 60.505 45.833 0.00 0.00 0.00 2.57
210 211 3.007940 CCGAACCTCTATTATGCCCATCA 59.992 47.826 0.00 0.00 0.00 3.07
211 212 3.600388 CCGAACCTCTATTATGCCCATC 58.400 50.000 0.00 0.00 0.00 3.51
212 213 2.290323 GCCGAACCTCTATTATGCCCAT 60.290 50.000 0.00 0.00 0.00 4.00
213 214 1.071699 GCCGAACCTCTATTATGCCCA 59.928 52.381 0.00 0.00 0.00 5.36
214 215 1.071699 TGCCGAACCTCTATTATGCCC 59.928 52.381 0.00 0.00 0.00 5.36
215 216 2.417719 CTGCCGAACCTCTATTATGCC 58.582 52.381 0.00 0.00 0.00 4.40
216 217 1.801178 GCTGCCGAACCTCTATTATGC 59.199 52.381 0.00 0.00 0.00 3.14
217 218 3.062763 CTGCTGCCGAACCTCTATTATG 58.937 50.000 0.00 0.00 0.00 1.90
218 219 2.037772 CCTGCTGCCGAACCTCTATTAT 59.962 50.000 0.00 0.00 0.00 1.28
219 220 1.412710 CCTGCTGCCGAACCTCTATTA 59.587 52.381 0.00 0.00 0.00 0.98
220 221 0.179000 CCTGCTGCCGAACCTCTATT 59.821 55.000 0.00 0.00 0.00 1.73
221 222 0.687757 TCCTGCTGCCGAACCTCTAT 60.688 55.000 0.00 0.00 0.00 1.98
222 223 1.304962 TCCTGCTGCCGAACCTCTA 60.305 57.895 0.00 0.00 0.00 2.43
223 224 2.604686 TCCTGCTGCCGAACCTCT 60.605 61.111 0.00 0.00 0.00 3.69
224 225 2.435059 GTCCTGCTGCCGAACCTC 60.435 66.667 0.00 0.00 0.00 3.85
225 226 2.818169 TTGTCCTGCTGCCGAACCT 61.818 57.895 0.00 0.00 0.00 3.50
226 227 2.281484 TTGTCCTGCTGCCGAACC 60.281 61.111 0.00 0.00 0.00 3.62
227 228 2.946762 GTTGTCCTGCTGCCGAAC 59.053 61.111 0.00 0.00 0.00 3.95
228 229 2.664851 CGTTGTCCTGCTGCCGAA 60.665 61.111 0.00 0.00 0.00 4.30
229 230 3.858868 GACGTTGTCCTGCTGCCGA 62.859 63.158 0.00 0.00 0.00 5.54
230 231 3.414700 GACGTTGTCCTGCTGCCG 61.415 66.667 0.00 0.00 0.00 5.69
231 232 2.280797 TGACGTTGTCCTGCTGCC 60.281 61.111 0.00 0.00 0.00 4.85
232 233 1.595382 AGTGACGTTGTCCTGCTGC 60.595 57.895 0.00 0.00 0.00 5.25
233 234 0.249447 TCAGTGACGTTGTCCTGCTG 60.249 55.000 0.00 8.04 33.82 4.41
234 235 0.681733 ATCAGTGACGTTGTCCTGCT 59.318 50.000 0.00 0.67 33.82 4.24
235 236 2.363788 TATCAGTGACGTTGTCCTGC 57.636 50.000 0.00 0.00 33.82 4.85
236 237 5.179368 ACAAAATATCAGTGACGTTGTCCTG 59.821 40.000 0.00 8.31 34.53 3.86
237 238 5.179368 CACAAAATATCAGTGACGTTGTCCT 59.821 40.000 0.00 0.00 35.33 3.85
238 239 5.382303 CACAAAATATCAGTGACGTTGTCC 58.618 41.667 0.00 0.00 35.33 4.02
239 240 5.178623 TCCACAAAATATCAGTGACGTTGTC 59.821 40.000 0.00 0.00 35.33 3.18
240 241 5.060506 TCCACAAAATATCAGTGACGTTGT 58.939 37.500 0.00 0.91 35.33 3.32
241 242 5.605564 TCCACAAAATATCAGTGACGTTG 57.394 39.130 0.00 0.26 35.33 4.10
242 243 5.937540 TGATCCACAAAATATCAGTGACGTT 59.062 36.000 0.00 0.00 35.33 3.99
243 244 5.487433 TGATCCACAAAATATCAGTGACGT 58.513 37.500 0.00 0.00 35.33 4.34
244 245 6.609237 ATGATCCACAAAATATCAGTGACG 57.391 37.500 0.00 0.00 35.33 4.35
245 246 7.221452 GCAAATGATCCACAAAATATCAGTGAC 59.779 37.037 0.00 0.00 35.33 3.67
246 247 7.093858 TGCAAATGATCCACAAAATATCAGTGA 60.094 33.333 0.00 0.00 35.33 3.41
247 248 7.036829 TGCAAATGATCCACAAAATATCAGTG 58.963 34.615 0.00 0.00 33.40 3.66
248 249 7.172868 TGCAAATGATCCACAAAATATCAGT 57.827 32.000 0.00 0.00 33.40 3.41
249 250 6.200286 GCTGCAAATGATCCACAAAATATCAG 59.800 38.462 0.00 0.00 33.40 2.90
250 251 6.044046 GCTGCAAATGATCCACAAAATATCA 58.956 36.000 0.00 0.00 34.35 2.15
251 252 5.174398 CGCTGCAAATGATCCACAAAATATC 59.826 40.000 0.00 0.00 0.00 1.63
252 253 5.045215 CGCTGCAAATGATCCACAAAATAT 58.955 37.500 0.00 0.00 0.00 1.28
253 254 4.082300 ACGCTGCAAATGATCCACAAAATA 60.082 37.500 0.00 0.00 0.00 1.40
254 255 3.255725 CGCTGCAAATGATCCACAAAAT 58.744 40.909 0.00 0.00 0.00 1.82
255 256 2.035704 ACGCTGCAAATGATCCACAAAA 59.964 40.909 0.00 0.00 0.00 2.44
256 257 1.612950 ACGCTGCAAATGATCCACAAA 59.387 42.857 0.00 0.00 0.00 2.83
257 258 1.246649 ACGCTGCAAATGATCCACAA 58.753 45.000 0.00 0.00 0.00 3.33
258 259 1.068402 CAACGCTGCAAATGATCCACA 60.068 47.619 0.00 0.00 0.00 4.17
259 260 1.199789 TCAACGCTGCAAATGATCCAC 59.800 47.619 0.00 0.00 0.00 4.02
260 261 1.469703 CTCAACGCTGCAAATGATCCA 59.530 47.619 0.00 0.00 0.00 3.41
261 262 1.202222 CCTCAACGCTGCAAATGATCC 60.202 52.381 0.00 0.00 0.00 3.36
262 263 1.796617 GCCTCAACGCTGCAAATGATC 60.797 52.381 0.00 0.00 0.00 2.92
263 264 0.171903 GCCTCAACGCTGCAAATGAT 59.828 50.000 0.00 0.00 0.00 2.45
264 265 0.890542 AGCCTCAACGCTGCAAATGA 60.891 50.000 0.00 0.00 37.82 2.57
265 266 1.582968 AGCCTCAACGCTGCAAATG 59.417 52.632 0.00 0.00 37.82 2.32
266 267 4.085876 AGCCTCAACGCTGCAAAT 57.914 50.000 0.00 0.00 37.82 2.32
272 273 2.032681 GGGTTCAGCCTCAACGCT 59.967 61.111 0.00 0.00 40.65 5.07
273 274 3.056328 GGGGTTCAGCCTCAACGC 61.056 66.667 0.00 0.00 37.78 4.84
274 275 1.672356 CAGGGGTTCAGCCTCAACG 60.672 63.158 0.00 0.00 41.40 4.10
275 276 1.973812 GCAGGGGTTCAGCCTCAAC 60.974 63.158 0.00 0.00 41.40 3.18
276 277 2.436109 GCAGGGGTTCAGCCTCAA 59.564 61.111 0.00 0.00 41.40 3.02
277 278 3.650950 GGCAGGGGTTCAGCCTCA 61.651 66.667 0.00 0.00 44.92 3.86
278 279 4.785453 CGGCAGGGGTTCAGCCTC 62.785 72.222 0.00 0.00 46.14 4.70
293 294 2.594303 TGAAACTGCCAGCACCGG 60.594 61.111 0.00 0.00 0.00 5.28
294 295 1.893808 ACTGAAACTGCCAGCACCG 60.894 57.895 0.00 0.00 35.14 4.94
295 296 1.656441 CACTGAAACTGCCAGCACC 59.344 57.895 0.00 0.00 35.14 5.01
296 297 1.656441 CCACTGAAACTGCCAGCAC 59.344 57.895 0.00 0.00 35.14 4.40
297 298 2.195567 GCCACTGAAACTGCCAGCA 61.196 57.895 0.00 0.00 35.14 4.41
298 299 2.647297 GCCACTGAAACTGCCAGC 59.353 61.111 0.00 0.00 35.14 4.85
299 300 2.949106 CGCCACTGAAACTGCCAG 59.051 61.111 0.00 0.00 37.64 4.85
300 301 3.286751 GCGCCACTGAAACTGCCA 61.287 61.111 0.00 0.00 0.00 4.92
301 302 4.043200 GGCGCCACTGAAACTGCC 62.043 66.667 24.80 0.00 35.04 4.85
302 303 4.389576 CGGCGCCACTGAAACTGC 62.390 66.667 28.98 0.00 0.00 4.40
303 304 2.972505 ACGGCGCCACTGAAACTG 60.973 61.111 28.98 9.11 0.00 3.16
304 305 2.972505 CACGGCGCCACTGAAACT 60.973 61.111 28.98 0.00 0.00 2.66
305 306 4.025401 CCACGGCGCCACTGAAAC 62.025 66.667 28.98 0.00 0.00 2.78
306 307 3.758973 TTCCACGGCGCCACTGAAA 62.759 57.895 28.98 8.10 0.00 2.69
307 308 3.758973 TTTCCACGGCGCCACTGAA 62.759 57.895 28.98 21.05 0.00 3.02
308 309 4.243008 TTTCCACGGCGCCACTGA 62.243 61.111 28.98 16.04 0.00 3.41
309 310 4.025401 GTTTCCACGGCGCCACTG 62.025 66.667 28.98 20.24 0.00 3.66
318 319 1.438562 AAACGTTCCCGGTTTCCACG 61.439 55.000 0.00 3.59 42.48 4.94
319 320 0.029700 CAAACGTTCCCGGTTTCCAC 59.970 55.000 0.00 0.00 42.48 4.02
320 321 1.726533 GCAAACGTTCCCGGTTTCCA 61.727 55.000 0.00 0.00 42.48 3.53
321 322 1.008194 GCAAACGTTCCCGGTTTCC 60.008 57.895 0.00 0.00 42.48 3.13
322 323 1.369568 CGCAAACGTTCCCGGTTTC 60.370 57.895 0.00 0.00 42.48 2.78
323 324 1.167781 ATCGCAAACGTTCCCGGTTT 61.168 50.000 16.96 0.00 42.48 3.27
325 326 0.108041 ATATCGCAAACGTTCCCGGT 60.108 50.000 16.96 13.83 41.18 5.28
326 327 1.011333 AATATCGCAAACGTTCCCGG 58.989 50.000 16.96 0.00 41.18 5.73
327 328 2.817538 AAATATCGCAAACGTTCCCG 57.182 45.000 0.00 7.76 41.18 5.14
328 329 2.596862 GCAAAATATCGCAAACGTTCCC 59.403 45.455 0.00 0.00 41.18 3.97
329 330 3.238441 TGCAAAATATCGCAAACGTTCC 58.762 40.909 0.00 0.00 41.18 3.62
330 331 4.877270 TTGCAAAATATCGCAAACGTTC 57.123 36.364 0.00 0.00 44.71 3.95
337 338 5.278907 CCCCTGATTATTGCAAAATATCGCA 60.279 40.000 1.71 0.00 36.05 5.10
338 339 5.163513 CCCCTGATTATTGCAAAATATCGC 58.836 41.667 1.71 0.00 0.00 4.58
339 340 6.151691 CACCCCTGATTATTGCAAAATATCG 58.848 40.000 1.71 4.03 0.00 2.92
340 341 7.054491 ACACCCCTGATTATTGCAAAATATC 57.946 36.000 1.71 7.49 0.00 1.63
341 342 7.125507 TGAACACCCCTGATTATTGCAAAATAT 59.874 33.333 1.71 0.00 0.00 1.28
342 343 6.438741 TGAACACCCCTGATTATTGCAAAATA 59.561 34.615 1.71 0.00 0.00 1.40
343 344 5.248020 TGAACACCCCTGATTATTGCAAAAT 59.752 36.000 1.71 4.89 0.00 1.82
344 345 4.590647 TGAACACCCCTGATTATTGCAAAA 59.409 37.500 1.71 0.00 0.00 2.44
345 346 4.155709 TGAACACCCCTGATTATTGCAAA 58.844 39.130 1.71 0.00 0.00 3.68
346 347 3.772387 TGAACACCCCTGATTATTGCAA 58.228 40.909 0.00 0.00 0.00 4.08
347 348 3.448093 TGAACACCCCTGATTATTGCA 57.552 42.857 0.00 0.00 0.00 4.08
348 349 3.491447 GCATGAACACCCCTGATTATTGC 60.491 47.826 0.00 0.00 0.00 3.56
349 350 3.068590 GGCATGAACACCCCTGATTATTG 59.931 47.826 0.00 0.00 0.00 1.90
350 351 3.299503 GGCATGAACACCCCTGATTATT 58.700 45.455 0.00 0.00 0.00 1.40
351 352 2.749466 CGGCATGAACACCCCTGATTAT 60.749 50.000 0.00 0.00 0.00 1.28
352 353 1.408127 CGGCATGAACACCCCTGATTA 60.408 52.381 0.00 0.00 0.00 1.75
353 354 0.680921 CGGCATGAACACCCCTGATT 60.681 55.000 0.00 0.00 0.00 2.57
354 355 1.077501 CGGCATGAACACCCCTGAT 60.078 57.895 0.00 0.00 0.00 2.90
355 356 1.195442 TACGGCATGAACACCCCTGA 61.195 55.000 0.00 0.00 0.00 3.86
356 357 0.744414 CTACGGCATGAACACCCCTG 60.744 60.000 0.00 0.00 0.00 4.45
357 358 0.907704 TCTACGGCATGAACACCCCT 60.908 55.000 0.00 0.00 0.00 4.79
358 359 0.743345 GTCTACGGCATGAACACCCC 60.743 60.000 0.00 0.00 0.00 4.95
359 360 0.036765 TGTCTACGGCATGAACACCC 60.037 55.000 0.00 0.00 0.00 4.61
360 361 1.463444 GTTGTCTACGGCATGAACACC 59.537 52.381 0.00 0.00 0.00 4.16
361 362 2.413837 AGTTGTCTACGGCATGAACAC 58.586 47.619 0.00 0.00 0.00 3.32
362 363 2.831685 AGTTGTCTACGGCATGAACA 57.168 45.000 0.00 0.00 0.00 3.18
363 364 3.064207 TGAAGTTGTCTACGGCATGAAC 58.936 45.455 0.00 0.00 0.00 3.18
364 365 3.064207 GTGAAGTTGTCTACGGCATGAA 58.936 45.455 0.00 0.00 0.00 2.57
365 366 2.299013 AGTGAAGTTGTCTACGGCATGA 59.701 45.455 0.00 0.00 0.00 3.07
366 367 2.688507 AGTGAAGTTGTCTACGGCATG 58.311 47.619 0.00 0.00 0.00 4.06
367 368 4.530710 TTAGTGAAGTTGTCTACGGCAT 57.469 40.909 0.00 0.00 0.00 4.40
368 369 4.530710 ATTAGTGAAGTTGTCTACGGCA 57.469 40.909 0.00 0.00 0.00 5.69
369 370 4.802563 GGTATTAGTGAAGTTGTCTACGGC 59.197 45.833 0.00 0.00 0.00 5.68
370 371 6.034591 CAGGTATTAGTGAAGTTGTCTACGG 58.965 44.000 0.00 0.00 0.00 4.02
371 372 6.618811 ACAGGTATTAGTGAAGTTGTCTACG 58.381 40.000 0.00 0.00 0.00 3.51
374 375 8.414778 GCTATACAGGTATTAGTGAAGTTGTCT 58.585 37.037 0.00 0.00 0.00 3.41
375 376 8.195436 TGCTATACAGGTATTAGTGAAGTTGTC 58.805 37.037 0.00 0.00 0.00 3.18
376 377 8.074613 TGCTATACAGGTATTAGTGAAGTTGT 57.925 34.615 0.00 0.00 0.00 3.32
379 380 9.809395 TCTATGCTATACAGGTATTAGTGAAGT 57.191 33.333 0.00 0.00 0.00 3.01
381 382 9.582648 TGTCTATGCTATACAGGTATTAGTGAA 57.417 33.333 0.00 0.00 0.00 3.18
382 383 9.011095 GTGTCTATGCTATACAGGTATTAGTGA 57.989 37.037 0.00 0.00 0.00 3.41
383 384 8.244802 GGTGTCTATGCTATACAGGTATTAGTG 58.755 40.741 0.00 0.00 0.00 2.74
384 385 7.396623 GGGTGTCTATGCTATACAGGTATTAGT 59.603 40.741 0.00 0.00 0.00 2.24
385 386 7.396339 TGGGTGTCTATGCTATACAGGTATTAG 59.604 40.741 0.00 0.00 0.00 1.73
386 387 7.243091 TGGGTGTCTATGCTATACAGGTATTA 58.757 38.462 0.00 0.00 0.00 0.98
387 388 6.082031 TGGGTGTCTATGCTATACAGGTATT 58.918 40.000 0.00 0.00 0.00 1.89
388 389 5.651303 TGGGTGTCTATGCTATACAGGTAT 58.349 41.667 0.00 0.00 0.00 2.73
389 390 5.069518 TGGGTGTCTATGCTATACAGGTA 57.930 43.478 0.00 0.00 0.00 3.08
390 391 3.923648 TGGGTGTCTATGCTATACAGGT 58.076 45.455 0.00 0.00 0.00 4.00
391 392 4.284490 ACATGGGTGTCTATGCTATACAGG 59.716 45.833 0.00 0.00 35.57 4.00
392 393 5.474578 ACATGGGTGTCTATGCTATACAG 57.525 43.478 0.00 0.00 35.57 2.74
393 394 5.887214 AACATGGGTGTCTATGCTATACA 57.113 39.130 0.00 0.00 37.67 2.29
394 395 7.568199 AAAAACATGGGTGTCTATGCTATAC 57.432 36.000 0.00 0.00 37.67 1.47
415 416 6.982852 TGTGTTTAGAATTATCCGGCAAAAA 58.017 32.000 0.00 0.00 0.00 1.94
416 417 6.576662 TGTGTTTAGAATTATCCGGCAAAA 57.423 33.333 0.00 0.00 0.00 2.44
417 418 6.349777 CCTTGTGTTTAGAATTATCCGGCAAA 60.350 38.462 0.00 0.00 0.00 3.68
418 419 5.124776 CCTTGTGTTTAGAATTATCCGGCAA 59.875 40.000 0.00 0.00 0.00 4.52
419 420 4.638421 CCTTGTGTTTAGAATTATCCGGCA 59.362 41.667 0.00 0.00 0.00 5.69
420 421 4.879545 TCCTTGTGTTTAGAATTATCCGGC 59.120 41.667 0.00 0.00 0.00 6.13
421 422 5.006358 CGTCCTTGTGTTTAGAATTATCCGG 59.994 44.000 0.00 0.00 0.00 5.14
422 423 5.808540 TCGTCCTTGTGTTTAGAATTATCCG 59.191 40.000 0.00 0.00 0.00 4.18
423 424 7.787725 ATCGTCCTTGTGTTTAGAATTATCC 57.212 36.000 0.00 0.00 0.00 2.59
426 427 8.609176 GCATAATCGTCCTTGTGTTTAGAATTA 58.391 33.333 0.00 0.00 0.00 1.40
427 428 7.120579 TGCATAATCGTCCTTGTGTTTAGAATT 59.879 33.333 0.00 0.00 0.00 2.17
428 429 6.597672 TGCATAATCGTCCTTGTGTTTAGAAT 59.402 34.615 0.00 0.00 0.00 2.40
429 430 5.935206 TGCATAATCGTCCTTGTGTTTAGAA 59.065 36.000 0.00 0.00 0.00 2.10
430 431 5.483811 TGCATAATCGTCCTTGTGTTTAGA 58.516 37.500 0.00 0.00 0.00 2.10
431 432 5.220662 CCTGCATAATCGTCCTTGTGTTTAG 60.221 44.000 0.00 0.00 0.00 1.85
432 433 4.634004 CCTGCATAATCGTCCTTGTGTTTA 59.366 41.667 0.00 0.00 0.00 2.01
433 434 3.440173 CCTGCATAATCGTCCTTGTGTTT 59.560 43.478 0.00 0.00 0.00 2.83
434 435 3.009723 CCTGCATAATCGTCCTTGTGTT 58.990 45.455 0.00 0.00 0.00 3.32
435 436 2.236146 TCCTGCATAATCGTCCTTGTGT 59.764 45.455 0.00 0.00 0.00 3.72
436 437 2.905075 TCCTGCATAATCGTCCTTGTG 58.095 47.619 0.00 0.00 0.00 3.33
437 438 3.845781 ATCCTGCATAATCGTCCTTGT 57.154 42.857 0.00 0.00 0.00 3.16
438 439 4.024556 GTGAATCCTGCATAATCGTCCTTG 60.025 45.833 0.00 0.00 0.00 3.61
439 440 4.130118 GTGAATCCTGCATAATCGTCCTT 58.870 43.478 0.00 0.00 0.00 3.36
440 441 3.733337 GTGAATCCTGCATAATCGTCCT 58.267 45.455 0.00 0.00 0.00 3.85
441 442 2.476619 CGTGAATCCTGCATAATCGTCC 59.523 50.000 0.00 0.00 0.00 4.79
442 443 3.381045 TCGTGAATCCTGCATAATCGTC 58.619 45.455 0.00 0.00 0.00 4.20
443 444 3.384668 CTCGTGAATCCTGCATAATCGT 58.615 45.455 0.00 0.00 0.00 3.73
444 445 2.156504 GCTCGTGAATCCTGCATAATCG 59.843 50.000 0.00 0.00 0.00 3.34
445 446 2.481952 GGCTCGTGAATCCTGCATAATC 59.518 50.000 0.00 0.00 0.00 1.75
446 447 2.498167 GGCTCGTGAATCCTGCATAAT 58.502 47.619 0.00 0.00 0.00 1.28
447 448 1.953559 GGCTCGTGAATCCTGCATAA 58.046 50.000 0.00 0.00 0.00 1.90
448 449 3.686622 GGCTCGTGAATCCTGCATA 57.313 52.632 0.00 0.00 0.00 3.14
449 450 4.547859 GGCTCGTGAATCCTGCAT 57.452 55.556 0.00 0.00 0.00 3.96
674 675 2.076863 AGCAATGCTAGAACAACGGAC 58.923 47.619 5.69 0.00 36.99 4.79
675 676 2.028112 AGAGCAATGCTAGAACAACGGA 60.028 45.455 8.12 0.00 39.88 4.69
676 677 2.350522 AGAGCAATGCTAGAACAACGG 58.649 47.619 8.12 0.00 39.88 4.44
677 678 4.410492 AAAGAGCAATGCTAGAACAACG 57.590 40.909 8.12 0.00 39.88 4.10
697 698 5.278071 CGAAATACTACCAGTGTGGCAAAAA 60.278 40.000 0.00 0.00 42.67 1.94
698 699 4.214545 CGAAATACTACCAGTGTGGCAAAA 59.785 41.667 0.00 0.00 42.67 2.44
699 700 3.749088 CGAAATACTACCAGTGTGGCAAA 59.251 43.478 0.00 0.00 42.67 3.68
700 701 3.331150 CGAAATACTACCAGTGTGGCAA 58.669 45.455 0.00 0.00 42.67 4.52
701 702 2.354303 CCGAAATACTACCAGTGTGGCA 60.354 50.000 0.00 0.00 42.67 4.92
702 703 2.277084 CCGAAATACTACCAGTGTGGC 58.723 52.381 0.00 0.00 42.67 5.01
703 704 3.604875 ACCGAAATACTACCAGTGTGG 57.395 47.619 0.00 0.00 45.02 4.17
704 705 4.992319 TGAAACCGAAATACTACCAGTGTG 59.008 41.667 0.00 0.00 0.00 3.82
705 706 5.011329 TCTGAAACCGAAATACTACCAGTGT 59.989 40.000 0.00 0.00 0.00 3.55
706 707 5.475719 TCTGAAACCGAAATACTACCAGTG 58.524 41.667 0.00 0.00 0.00 3.66
707 708 5.245526 ACTCTGAAACCGAAATACTACCAGT 59.754 40.000 0.00 0.00 0.00 4.00
708 709 5.721232 ACTCTGAAACCGAAATACTACCAG 58.279 41.667 0.00 0.00 0.00 4.00
709 710 5.620654 CGACTCTGAAACCGAAATACTACCA 60.621 44.000 0.00 0.00 0.00 3.25
710 711 4.797349 CGACTCTGAAACCGAAATACTACC 59.203 45.833 0.00 0.00 0.00 3.18
711 712 5.511025 GTCGACTCTGAAACCGAAATACTAC 59.489 44.000 8.70 0.00 32.60 2.73
712 713 5.181811 TGTCGACTCTGAAACCGAAATACTA 59.818 40.000 17.92 0.00 32.60 1.82
713 714 4.022589 TGTCGACTCTGAAACCGAAATACT 60.023 41.667 17.92 0.00 32.60 2.12
714 715 4.089636 GTGTCGACTCTGAAACCGAAATAC 59.910 45.833 17.92 0.00 32.60 1.89
715 716 4.232221 GTGTCGACTCTGAAACCGAAATA 58.768 43.478 17.92 0.00 32.60 1.40
716 717 3.057734 GTGTCGACTCTGAAACCGAAAT 58.942 45.455 17.92 0.00 32.60 2.17
717 718 2.466846 GTGTCGACTCTGAAACCGAAA 58.533 47.619 17.92 0.00 32.60 3.46
718 719 1.269413 GGTGTCGACTCTGAAACCGAA 60.269 52.381 17.92 0.00 36.55 4.30
719 720 0.313043 GGTGTCGACTCTGAAACCGA 59.687 55.000 17.92 0.00 36.55 4.69
720 721 2.810486 GGTGTCGACTCTGAAACCG 58.190 57.895 17.92 0.00 36.55 4.44
721 722 1.068741 AGTGGTGTCGACTCTGAAACC 59.931 52.381 17.92 14.75 45.12 3.27
722 723 2.510768 AGTGGTGTCGACTCTGAAAC 57.489 50.000 17.92 4.96 0.00 2.78
723 724 4.866508 ATTAGTGGTGTCGACTCTGAAA 57.133 40.909 17.92 7.28 0.00 2.69
724 725 4.866508 AATTAGTGGTGTCGACTCTGAA 57.133 40.909 17.92 6.78 0.00 3.02
725 726 4.866508 AAATTAGTGGTGTCGACTCTGA 57.133 40.909 17.92 7.23 0.00 3.27
726 727 5.924475 AAAAATTAGTGGTGTCGACTCTG 57.076 39.130 17.92 0.00 0.00 3.35
747 748 5.235616 GTGGTGTCGACTCAGTTATCAAAAA 59.764 40.000 17.92 0.00 0.00 1.94
748 749 4.748102 GTGGTGTCGACTCAGTTATCAAAA 59.252 41.667 17.92 0.00 0.00 2.44
749 750 4.038763 AGTGGTGTCGACTCAGTTATCAAA 59.961 41.667 17.92 0.00 0.00 2.69
750 751 3.572682 AGTGGTGTCGACTCAGTTATCAA 59.427 43.478 17.92 0.00 0.00 2.57
751 752 3.154710 AGTGGTGTCGACTCAGTTATCA 58.845 45.455 17.92 0.00 0.00 2.15
752 753 3.851976 AGTGGTGTCGACTCAGTTATC 57.148 47.619 17.92 0.00 0.00 1.75
753 754 5.916661 ATTAGTGGTGTCGACTCAGTTAT 57.083 39.130 17.92 13.34 0.00 1.89
754 755 5.717078 AATTAGTGGTGTCGACTCAGTTA 57.283 39.130 17.92 11.78 0.00 2.24
755 756 4.602340 AATTAGTGGTGTCGACTCAGTT 57.398 40.909 17.92 8.83 0.00 3.16
756 757 5.652891 AGATAATTAGTGGTGTCGACTCAGT 59.347 40.000 17.92 18.34 0.00 3.41
757 758 6.137794 AGATAATTAGTGGTGTCGACTCAG 57.862 41.667 17.92 0.00 0.00 3.35
758 759 7.818997 ATAGATAATTAGTGGTGTCGACTCA 57.181 36.000 17.92 12.22 0.00 3.41
759 760 7.956403 CGTATAGATAATTAGTGGTGTCGACTC 59.044 40.741 17.92 13.38 0.00 3.36
760 761 7.443575 ACGTATAGATAATTAGTGGTGTCGACT 59.556 37.037 17.92 0.00 0.00 4.18
761 762 7.579726 ACGTATAGATAATTAGTGGTGTCGAC 58.420 38.462 9.11 9.11 0.00 4.20
762 763 7.734924 ACGTATAGATAATTAGTGGTGTCGA 57.265 36.000 0.00 0.00 0.00 4.20
763 764 8.498358 TGTACGTATAGATAATTAGTGGTGTCG 58.502 37.037 0.00 0.00 0.00 4.35
782 783 9.248291 CCACTAGTAGAAAAACTTTTGTACGTA 57.752 33.333 3.59 0.00 45.87 3.57
783 784 7.765819 ACCACTAGTAGAAAAACTTTTGTACGT 59.234 33.333 3.59 0.00 45.87 3.57
784 785 8.134905 ACCACTAGTAGAAAAACTTTTGTACG 57.865 34.615 3.59 6.25 45.87 3.67
785 786 9.712359 CAACCACTAGTAGAAAAACTTTTGTAC 57.288 33.333 3.59 12.11 43.34 2.90
786 787 9.452287 ACAACCACTAGTAGAAAAACTTTTGTA 57.548 29.630 3.59 0.00 0.00 2.41
787 788 8.344446 ACAACCACTAGTAGAAAAACTTTTGT 57.656 30.769 3.59 0.00 0.00 2.83
788 789 9.634163 AAACAACCACTAGTAGAAAAACTTTTG 57.366 29.630 3.59 0.00 0.00 2.44
813 814 6.463995 AGTAGAATCCAACTGCAACAAAAA 57.536 33.333 0.00 0.00 0.00 1.94
814 815 6.770785 ACTAGTAGAATCCAACTGCAACAAAA 59.229 34.615 3.59 0.00 0.00 2.44
815 816 6.204688 CACTAGTAGAATCCAACTGCAACAAA 59.795 38.462 3.59 0.00 0.00 2.83
816 817 5.700832 CACTAGTAGAATCCAACTGCAACAA 59.299 40.000 3.59 0.00 0.00 2.83
817 818 5.237815 CACTAGTAGAATCCAACTGCAACA 58.762 41.667 3.59 0.00 0.00 3.33
818 819 4.631813 CCACTAGTAGAATCCAACTGCAAC 59.368 45.833 3.59 0.00 0.00 4.17
819 820 4.286032 ACCACTAGTAGAATCCAACTGCAA 59.714 41.667 3.59 0.00 0.00 4.08
820 821 3.838317 ACCACTAGTAGAATCCAACTGCA 59.162 43.478 3.59 0.00 0.00 4.41
821 822 4.473477 ACCACTAGTAGAATCCAACTGC 57.527 45.455 3.59 0.00 0.00 4.40
822 823 5.794894 ACAACCACTAGTAGAATCCAACTG 58.205 41.667 3.59 0.00 0.00 3.16
823 824 6.435292 AACAACCACTAGTAGAATCCAACT 57.565 37.500 3.59 0.00 0.00 3.16
824 825 7.609056 TCTAACAACCACTAGTAGAATCCAAC 58.391 38.462 3.59 0.00 0.00 3.77
825 826 7.578955 GCTCTAACAACCACTAGTAGAATCCAA 60.579 40.741 3.59 0.00 0.00 3.53
826 827 6.127423 GCTCTAACAACCACTAGTAGAATCCA 60.127 42.308 3.59 0.00 0.00 3.41
827 828 6.097129 AGCTCTAACAACCACTAGTAGAATCC 59.903 42.308 3.59 0.00 0.00 3.01
828 829 7.102847 AGCTCTAACAACCACTAGTAGAATC 57.897 40.000 3.59 0.00 0.00 2.52
829 830 6.097129 GGAGCTCTAACAACCACTAGTAGAAT 59.903 42.308 14.64 0.00 0.00 2.40
830 831 5.418209 GGAGCTCTAACAACCACTAGTAGAA 59.582 44.000 14.64 0.00 0.00 2.10
831 832 4.948621 GGAGCTCTAACAACCACTAGTAGA 59.051 45.833 14.64 0.00 0.00 2.59
832 833 4.951094 AGGAGCTCTAACAACCACTAGTAG 59.049 45.833 14.64 0.00 0.00 2.57
833 834 4.931914 AGGAGCTCTAACAACCACTAGTA 58.068 43.478 14.64 0.00 0.00 1.82
834 835 3.780626 AGGAGCTCTAACAACCACTAGT 58.219 45.455 14.64 0.00 0.00 2.57
835 836 4.810191 AAGGAGCTCTAACAACCACTAG 57.190 45.455 14.64 0.00 0.00 2.57
836 837 6.869206 AATAAGGAGCTCTAACAACCACTA 57.131 37.500 14.64 0.00 0.00 2.74
837 838 5.763876 AATAAGGAGCTCTAACAACCACT 57.236 39.130 14.64 0.00 0.00 4.00
838 839 6.877322 TGTTAATAAGGAGCTCTAACAACCAC 59.123 38.462 18.16 7.29 31.38 4.16
839 840 7.011499 TGTTAATAAGGAGCTCTAACAACCA 57.989 36.000 18.16 4.59 31.38 3.67
840 841 9.609346 TTATGTTAATAAGGAGCTCTAACAACC 57.391 33.333 22.07 3.79 36.40 3.77
873 876 6.434340 TCTCGCTCTAGAAATATTCATAGCCA 59.566 38.462 0.00 0.00 31.39 4.75
881 884 9.853555 CAGAACATATCTCGCTCTAGAAATATT 57.146 33.333 0.00 0.00 35.73 1.28
890 898 2.954989 TCAGCAGAACATATCTCGCTCT 59.045 45.455 0.00 0.00 39.17 4.09
896 904 8.363761 TGATATGAGATCAGCAGAACATATCT 57.636 34.615 25.22 10.48 40.83 1.98
1533 1561 2.640826 ACGGACATTCCTAACAAGGGAA 59.359 45.455 0.00 0.00 45.40 3.97
1539 1567 1.943968 GCAGCACGGACATTCCTAACA 60.944 52.381 0.00 0.00 33.30 2.41
1564 1607 2.180159 TTTACTGGCTCGCCACCTCC 62.180 60.000 6.52 0.00 41.89 4.30
1569 1612 0.179111 CGAGATTTACTGGCTCGCCA 60.179 55.000 10.64 10.64 43.88 5.69
1767 1834 3.753434 CAGAGCCGGCGTCTCACT 61.753 66.667 23.20 11.74 33.15 3.41
1849 1916 1.605712 CGCCGTTGACTTCTTCTCCTT 60.606 52.381 0.00 0.00 0.00 3.36
1879 1946 1.411977 CAGAAGGTCATCATCTCCGCT 59.588 52.381 0.00 0.00 0.00 5.52
1993 2060 5.352293 TCATCGACCATGTGAATCTTTCAAG 59.648 40.000 0.00 0.00 42.15 3.02
2050 2122 5.456192 AATCGACACGAAGAACATGAATC 57.544 39.130 0.00 0.00 39.99 2.52
2102 2174 2.289631 TGCTGATGATGTTGTCTCGGTT 60.290 45.455 0.00 0.00 0.00 4.44
2123 2195 0.463204 CCGACATGATCCACTCAGCT 59.537 55.000 0.00 0.00 37.28 4.24
2126 2198 0.461548 GCTCCGACATGATCCACTCA 59.538 55.000 0.00 0.00 38.53 3.41
2197 2269 3.283751 TGTGGGTTCTTGTTGTCGAATT 58.716 40.909 0.00 0.00 0.00 2.17
2339 2411 2.577059 GTGACCTCGAATCCGCCA 59.423 61.111 0.00 0.00 35.37 5.69
2383 2455 3.214250 CTCCTCGCTATCGCCCACC 62.214 68.421 0.00 0.00 35.26 4.61
2402 2474 3.008517 TCCTGCCAATGCTCGGGA 61.009 61.111 0.00 0.00 38.71 5.14
2505 2577 2.592308 GCACATCCTCCTCCCACC 59.408 66.667 0.00 0.00 0.00 4.61
2507 2579 2.692368 GGGCACATCCTCCTCCCA 60.692 66.667 0.00 0.00 36.96 4.37
2686 2758 3.750371 TCAATTGGGACATTATAGGGCG 58.250 45.455 5.42 0.00 39.30 6.13
2705 2777 5.957842 ACAAACATCGGCTTTAAAGATCA 57.042 34.783 19.48 1.32 0.00 2.92
2730 2802 3.614390 CGGCTTTAACCCCGCAATAAAAA 60.614 43.478 0.55 0.00 37.85 1.94
2731 2803 2.094649 CGGCTTTAACCCCGCAATAAAA 60.095 45.455 0.55 0.00 37.85 1.52
2732 2804 1.473278 CGGCTTTAACCCCGCAATAAA 59.527 47.619 0.55 0.00 37.85 1.40
2733 2805 1.096416 CGGCTTTAACCCCGCAATAA 58.904 50.000 0.55 0.00 37.85 1.40
2734 2806 0.252479 TCGGCTTTAACCCCGCAATA 59.748 50.000 7.86 0.00 44.01 1.90
2735 2807 0.395173 ATCGGCTTTAACCCCGCAAT 60.395 50.000 7.86 0.00 44.01 3.56
2736 2808 1.001887 ATCGGCTTTAACCCCGCAA 60.002 52.632 7.86 0.00 44.01 4.85
2737 2809 1.747367 CATCGGCTTTAACCCCGCA 60.747 57.895 7.86 0.00 44.01 5.69
2738 2810 1.310216 AACATCGGCTTTAACCCCGC 61.310 55.000 7.86 0.00 44.01 6.13
2739 2811 1.135517 CAAACATCGGCTTTAACCCCG 60.136 52.381 6.64 6.64 45.64 5.73
2740 2812 1.890489 ACAAACATCGGCTTTAACCCC 59.110 47.619 0.00 0.00 0.00 4.95
2741 2813 2.554893 TCACAAACATCGGCTTTAACCC 59.445 45.455 0.00 0.00 0.00 4.11
2742 2814 3.003897 TGTCACAAACATCGGCTTTAACC 59.996 43.478 0.00 0.00 31.20 2.85
2743 2815 4.217754 TGTCACAAACATCGGCTTTAAC 57.782 40.909 0.00 0.00 31.20 2.01
2744 2816 3.880490 ACTGTCACAAACATCGGCTTTAA 59.120 39.130 0.00 0.00 37.23 1.52
2745 2817 3.472652 ACTGTCACAAACATCGGCTTTA 58.527 40.909 0.00 0.00 37.23 1.85
2746 2818 2.297701 ACTGTCACAAACATCGGCTTT 58.702 42.857 0.00 0.00 37.23 3.51
2747 2819 1.967319 ACTGTCACAAACATCGGCTT 58.033 45.000 0.00 0.00 37.23 4.35
2748 2820 1.873591 GAACTGTCACAAACATCGGCT 59.126 47.619 0.00 0.00 37.23 5.52
2749 2821 1.601903 TGAACTGTCACAAACATCGGC 59.398 47.619 0.00 0.00 37.23 5.54
2799 2872 9.409312 CATTGCATAAAAACAAGACATGTAGAA 57.591 29.630 0.00 0.00 42.99 2.10
2804 2877 9.961266 CATTACATTGCATAAAAACAAGACATG 57.039 29.630 0.00 0.00 0.00 3.21
2865 2940 7.481798 GCAATTAAGTGACCTGAATTTTACTCG 59.518 37.037 7.18 0.00 30.49 4.18
2995 3079 2.644798 GTTCATATAGGGGGTGGAGCAT 59.355 50.000 0.00 0.00 0.00 3.79
3034 3120 1.291033 ACTCAGCCCTATGTAGGTCCA 59.709 52.381 5.42 0.00 42.03 4.02
3153 3243 1.908619 GGGGGCAAATCATTTGGAGTT 59.091 47.619 12.14 0.00 40.94 3.01
3159 3249 1.203288 TGGAGTGGGGGCAAATCATTT 60.203 47.619 0.00 0.00 0.00 2.32
3191 3281 3.377253 TTAGCGGGAGAGTAGGAAGAA 57.623 47.619 0.00 0.00 0.00 2.52
3218 3308 1.455217 GAGACCTAGCCACGCCCTA 60.455 63.158 0.00 0.00 0.00 3.53
3219 3309 2.760385 GAGACCTAGCCACGCCCT 60.760 66.667 0.00 0.00 0.00 5.19
3220 3310 4.208686 CGAGACCTAGCCACGCCC 62.209 72.222 0.00 0.00 0.00 6.13
3221 3311 4.208686 CCGAGACCTAGCCACGCC 62.209 72.222 0.00 0.00 0.00 5.68
3222 3312 3.412879 GACCGAGACCTAGCCACGC 62.413 68.421 0.00 0.00 0.00 5.34
3223 3313 1.592400 TTGACCGAGACCTAGCCACG 61.592 60.000 0.00 0.00 0.00 4.94
3224 3314 0.108756 GTTGACCGAGACCTAGCCAC 60.109 60.000 0.00 0.00 0.00 5.01
3225 3315 0.251653 AGTTGACCGAGACCTAGCCA 60.252 55.000 0.00 0.00 0.00 4.75
3226 3316 0.173708 CAGTTGACCGAGACCTAGCC 59.826 60.000 0.00 0.00 0.00 3.93
3227 3317 0.173708 CCAGTTGACCGAGACCTAGC 59.826 60.000 0.00 0.00 0.00 3.42
3228 3318 0.818296 CCCAGTTGACCGAGACCTAG 59.182 60.000 0.00 0.00 0.00 3.02
3229 3319 0.406750 TCCCAGTTGACCGAGACCTA 59.593 55.000 0.00 0.00 0.00 3.08
3230 3320 1.155390 TCCCAGTTGACCGAGACCT 59.845 57.895 0.00 0.00 0.00 3.85
3231 3321 1.186267 AGTCCCAGTTGACCGAGACC 61.186 60.000 0.00 0.00 35.83 3.85
3232 3322 0.680061 AAGTCCCAGTTGACCGAGAC 59.320 55.000 0.00 0.00 35.83 3.36
3233 3323 2.297698 TAAGTCCCAGTTGACCGAGA 57.702 50.000 0.00 0.00 35.83 4.04
3234 3324 2.612221 GGTTAAGTCCCAGTTGACCGAG 60.612 54.545 0.00 0.00 35.83 4.63
3235 3325 1.345415 GGTTAAGTCCCAGTTGACCGA 59.655 52.381 0.00 0.00 35.83 4.69
3236 3326 1.071071 TGGTTAAGTCCCAGTTGACCG 59.929 52.381 1.76 0.00 39.33 4.79
3237 3327 2.943036 TGGTTAAGTCCCAGTTGACC 57.057 50.000 0.00 0.00 37.60 4.02
3238 3328 3.816994 ACTTGGTTAAGTCCCAGTTGAC 58.183 45.455 0.00 0.00 43.53 3.18
3249 3339 5.601662 TCACTTGACTGAGACTTGGTTAAG 58.398 41.667 9.86 9.86 39.86 1.85
3250 3340 5.607939 TCACTTGACTGAGACTTGGTTAA 57.392 39.130 0.00 0.00 0.00 2.01
3251 3341 5.808366 ATCACTTGACTGAGACTTGGTTA 57.192 39.130 0.00 0.00 0.00 2.85
3252 3342 4.696479 ATCACTTGACTGAGACTTGGTT 57.304 40.909 0.00 0.00 0.00 3.67
3253 3343 6.406400 GCTATATCACTTGACTGAGACTTGGT 60.406 42.308 0.00 0.00 0.00 3.67
3254 3344 5.982516 GCTATATCACTTGACTGAGACTTGG 59.017 44.000 0.00 0.00 0.00 3.61
3255 3345 6.567959 TGCTATATCACTTGACTGAGACTTG 58.432 40.000 0.00 0.00 0.00 3.16
3256 3346 6.782082 TGCTATATCACTTGACTGAGACTT 57.218 37.500 0.00 0.00 0.00 3.01
3257 3347 6.323482 ACATGCTATATCACTTGACTGAGACT 59.677 38.462 0.00 0.00 0.00 3.24
3258 3348 6.511416 ACATGCTATATCACTTGACTGAGAC 58.489 40.000 0.00 0.00 0.00 3.36
3259 3349 6.721704 ACATGCTATATCACTTGACTGAGA 57.278 37.500 0.00 0.00 0.00 3.27
3260 3350 7.880105 TCTACATGCTATATCACTTGACTGAG 58.120 38.462 0.00 0.00 0.00 3.35
3261 3351 7.823745 TCTACATGCTATATCACTTGACTGA 57.176 36.000 0.00 0.00 0.00 3.41
3262 3352 8.877808 TTTCTACATGCTATATCACTTGACTG 57.122 34.615 0.00 0.00 0.00 3.51
3263 3353 8.918116 TCTTTCTACATGCTATATCACTTGACT 58.082 33.333 0.00 0.00 0.00 3.41
3264 3354 9.534565 TTCTTTCTACATGCTATATCACTTGAC 57.465 33.333 0.00 0.00 0.00 3.18
3313 3403 8.970859 ATTTTGTATGGACATTTGTGGAAAAA 57.029 26.923 0.00 0.00 34.86 1.94
3314 3404 8.206867 TGATTTTGTATGGACATTTGTGGAAAA 58.793 29.630 0.00 0.00 34.86 2.29
3315 3405 7.730084 TGATTTTGTATGGACATTTGTGGAAA 58.270 30.769 0.00 0.00 34.86 3.13
3316 3406 7.295322 TGATTTTGTATGGACATTTGTGGAA 57.705 32.000 0.00 0.00 34.86 3.53
3317 3407 6.907853 TGATTTTGTATGGACATTTGTGGA 57.092 33.333 0.00 0.00 34.86 4.02
3318 3408 7.118101 CCTTTGATTTTGTATGGACATTTGTGG 59.882 37.037 0.00 0.00 34.86 4.17
3319 3409 7.871973 TCCTTTGATTTTGTATGGACATTTGTG 59.128 33.333 0.00 0.00 34.86 3.33
3320 3410 7.961351 TCCTTTGATTTTGTATGGACATTTGT 58.039 30.769 0.00 0.00 34.86 2.83
3321 3411 8.830201 TTCCTTTGATTTTGTATGGACATTTG 57.170 30.769 0.00 0.00 34.86 2.32
3322 3412 8.869109 TCTTCCTTTGATTTTGTATGGACATTT 58.131 29.630 0.00 0.00 34.86 2.32
3323 3413 8.421249 TCTTCCTTTGATTTTGTATGGACATT 57.579 30.769 0.00 0.00 34.86 2.71
3324 3414 8.599624 ATCTTCCTTTGATTTTGTATGGACAT 57.400 30.769 0.00 0.00 34.86 3.06
3325 3415 9.177608 CTATCTTCCTTTGATTTTGTATGGACA 57.822 33.333 0.00 0.00 0.00 4.02
3326 3416 9.178758 ACTATCTTCCTTTGATTTTGTATGGAC 57.821 33.333 0.00 0.00 0.00 4.02
3332 3422 9.099454 GTCGATACTATCTTCCTTTGATTTTGT 57.901 33.333 0.00 0.00 0.00 2.83
3333 3423 9.319143 AGTCGATACTATCTTCCTTTGATTTTG 57.681 33.333 0.00 0.00 32.84 2.44
3334 3424 9.319143 CAGTCGATACTATCTTCCTTTGATTTT 57.681 33.333 0.00 0.00 33.48 1.82
3335 3425 8.696374 TCAGTCGATACTATCTTCCTTTGATTT 58.304 33.333 0.00 0.00 33.48 2.17
3336 3426 8.239038 TCAGTCGATACTATCTTCCTTTGATT 57.761 34.615 0.00 0.00 33.48 2.57
3337 3427 7.721842 TCTCAGTCGATACTATCTTCCTTTGAT 59.278 37.037 0.00 0.00 33.48 2.57
3338 3428 7.012515 GTCTCAGTCGATACTATCTTCCTTTGA 59.987 40.741 0.00 0.00 33.48 2.69
3339 3429 7.136119 GTCTCAGTCGATACTATCTTCCTTTG 58.864 42.308 0.00 0.00 33.48 2.77
3340 3430 6.829298 TGTCTCAGTCGATACTATCTTCCTTT 59.171 38.462 0.00 0.00 33.48 3.11
3341 3431 6.358178 TGTCTCAGTCGATACTATCTTCCTT 58.642 40.000 0.00 0.00 33.48 3.36
3342 3432 5.931294 TGTCTCAGTCGATACTATCTTCCT 58.069 41.667 0.00 0.00 33.48 3.36
3343 3433 6.811253 ATGTCTCAGTCGATACTATCTTCC 57.189 41.667 0.00 0.00 33.48 3.46
3344 3434 8.775527 TGTTATGTCTCAGTCGATACTATCTTC 58.224 37.037 0.00 0.00 33.48 2.87
3345 3435 8.678593 TGTTATGTCTCAGTCGATACTATCTT 57.321 34.615 0.00 0.00 33.48 2.40
3346 3436 8.678593 TTGTTATGTCTCAGTCGATACTATCT 57.321 34.615 0.00 0.00 33.48 1.98
3347 3437 9.388346 CTTTGTTATGTCTCAGTCGATACTATC 57.612 37.037 0.00 0.00 33.48 2.08
3348 3438 9.121658 TCTTTGTTATGTCTCAGTCGATACTAT 57.878 33.333 0.00 0.00 33.48 2.12
3349 3439 8.396390 GTCTTTGTTATGTCTCAGTCGATACTA 58.604 37.037 0.00 0.00 33.48 1.82
3350 3440 7.121463 AGTCTTTGTTATGTCTCAGTCGATACT 59.879 37.037 0.00 0.00 35.91 2.12
3351 3441 7.251994 AGTCTTTGTTATGTCTCAGTCGATAC 58.748 38.462 0.00 0.00 0.00 2.24
3352 3442 7.120726 TGAGTCTTTGTTATGTCTCAGTCGATA 59.879 37.037 0.00 0.00 0.00 2.92
3353 3443 6.071896 TGAGTCTTTGTTATGTCTCAGTCGAT 60.072 38.462 0.00 0.00 0.00 3.59
3354 3444 5.240844 TGAGTCTTTGTTATGTCTCAGTCGA 59.759 40.000 0.00 0.00 0.00 4.20
3355 3445 5.461526 TGAGTCTTTGTTATGTCTCAGTCG 58.538 41.667 0.00 0.00 0.00 4.18
3356 3446 6.942886 CTGAGTCTTTGTTATGTCTCAGTC 57.057 41.667 10.58 0.00 41.89 3.51
3359 3449 5.240844 TCGACTGAGTCTTTGTTATGTCTCA 59.759 40.000 11.26 0.00 0.00 3.27
3360 3450 5.569823 GTCGACTGAGTCTTTGTTATGTCTC 59.430 44.000 11.26 0.00 0.00 3.36
3361 3451 5.241949 AGTCGACTGAGTCTTTGTTATGTCT 59.758 40.000 19.30 0.00 0.00 3.41
3362 3452 5.343593 CAGTCGACTGAGTCTTTGTTATGTC 59.656 44.000 36.73 0.00 46.59 3.06
3363 3453 5.223382 CAGTCGACTGAGTCTTTGTTATGT 58.777 41.667 36.73 0.00 46.59 2.29
3364 3454 5.753713 CAGTCGACTGAGTCTTTGTTATG 57.246 43.478 36.73 8.45 46.59 1.90
3377 3467 3.560902 TTGCTAAGTCTCAGTCGACTG 57.439 47.619 34.76 34.76 43.14 3.51
3378 3468 4.038162 AGTTTTGCTAAGTCTCAGTCGACT 59.962 41.667 13.58 13.58 45.73 4.18
3379 3469 4.149046 CAGTTTTGCTAAGTCTCAGTCGAC 59.851 45.833 7.70 7.70 0.00 4.20
3380 3470 4.037565 TCAGTTTTGCTAAGTCTCAGTCGA 59.962 41.667 0.00 0.00 0.00 4.20
3381 3471 4.299155 TCAGTTTTGCTAAGTCTCAGTCG 58.701 43.478 0.00 0.00 0.00 4.18
3382 3472 6.604735 TTTCAGTTTTGCTAAGTCTCAGTC 57.395 37.500 0.00 0.00 0.00 3.51
3383 3473 8.854614 ATATTTCAGTTTTGCTAAGTCTCAGT 57.145 30.769 0.00 0.00 0.00 3.41
3405 3495 9.553064 CACTGAGCTTGGTAAAGAGATTAATAT 57.447 33.333 0.00 0.00 35.19 1.28
3406 3496 8.758829 TCACTGAGCTTGGTAAAGAGATTAATA 58.241 33.333 0.00 0.00 35.19 0.98
3407 3497 7.624549 TCACTGAGCTTGGTAAAGAGATTAAT 58.375 34.615 0.00 0.00 35.19 1.40
3408 3498 7.004555 TCACTGAGCTTGGTAAAGAGATTAA 57.995 36.000 0.00 0.00 35.19 1.40
3463 3553 1.172180 CGGGTCTGAAGCCTTTTGCA 61.172 55.000 0.00 0.00 44.83 4.08
3465 3555 1.581447 GCGGGTCTGAAGCCTTTTG 59.419 57.895 0.00 0.00 41.13 2.44
3495 3585 4.705991 TCATATCTTTTTGGTCATGCTGCA 59.294 37.500 4.13 4.13 0.00 4.41
3502 3592 8.690203 TTTCTTGAGTCATATCTTTTTGGTCA 57.310 30.769 0.00 0.00 0.00 4.02
3648 3751 7.028926 TCTTCTAGTCAATAGCCTTAGTTCG 57.971 40.000 0.00 0.00 0.00 3.95
3654 3757 6.181190 GGGTTTTCTTCTAGTCAATAGCCTT 58.819 40.000 0.00 0.00 0.00 4.35
3792 3903 2.668001 CGCTAGCTCTCATTCCTCATCG 60.668 54.545 13.93 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.