Multiple sequence alignment - TraesCS2D01G421300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G421300 chr2D 100.000 4147 0 0 1 4147 534958587 534954441 0.000000e+00 7659.0
1 TraesCS2D01G421300 chr2D 88.462 78 7 2 1837 1913 14662759 14662835 4.410000e-15 93.5
2 TraesCS2D01G421300 chr2D 87.179 78 8 2 1837 1913 496895316 496895392 2.050000e-13 87.9
3 TraesCS2D01G421300 chr2B 90.866 2507 133 45 727 3165 636211489 636209011 0.000000e+00 3273.0
4 TraesCS2D01G421300 chr2B 89.560 613 31 15 1 589 636212517 636211914 0.000000e+00 747.0
5 TraesCS2D01G421300 chr2A 89.086 2034 101 53 1567 3539 678191750 678189777 0.000000e+00 2414.0
6 TraesCS2D01G421300 chr2A 87.320 1317 80 29 1 1269 678193307 678192030 0.000000e+00 1426.0
7 TraesCS2D01G421300 chr2A 83.708 356 31 11 3792 4145 678189746 678189416 1.120000e-80 311.0
8 TraesCS2D01G421300 chr6B 86.033 673 42 18 1146 1787 700079246 700078595 0.000000e+00 675.0
9 TraesCS2D01G421300 chr6B 75.660 341 60 17 2287 2620 449452675 449452351 9.290000e-32 148.0
10 TraesCS2D01G421300 chr4D 77.746 346 62 13 2278 2617 447341882 447341546 9.090000e-47 198.0
11 TraesCS2D01G421300 chr4D 87.179 78 8 2 1837 1913 141361679 141361755 2.050000e-13 87.9
12 TraesCS2D01G421300 chr4B 76.571 350 63 15 2278 2617 559867026 559866686 1.530000e-39 174.0
13 TraesCS2D01G421300 chr6A 76.590 346 54 16 2284 2620 436114842 436115169 9.220000e-37 165.0
14 TraesCS2D01G421300 chr6A 87.179 78 8 2 1837 1913 436113714 436113790 2.050000e-13 87.9
15 TraesCS2D01G421300 chr5A 86.777 121 11 5 158 277 608989614 608989730 3.360000e-26 130.0
16 TraesCS2D01G421300 chr5D 85.950 121 12 5 158 277 488236664 488236780 1.570000e-24 124.0
17 TraesCS2D01G421300 chr5D 87.179 78 8 2 1837 1913 563496797 563496721 2.050000e-13 87.9
18 TraesCS2D01G421300 chr5B 85.950 121 12 5 158 277 600940045 600940161 1.570000e-24 124.0
19 TraesCS2D01G421300 chr5B 89.286 56 6 0 2562 2617 506665268 506665323 2.070000e-08 71.3
20 TraesCS2D01G421300 chr5B 89.286 56 6 0 2562 2617 643312659 643312714 2.070000e-08 71.3
21 TraesCS2D01G421300 chr6D 88.660 97 11 0 2523 2619 289027834 289027738 7.280000e-23 119.0
22 TraesCS2D01G421300 chr3D 79.310 174 23 5 3985 4145 339444112 339443939 4.380000e-20 110.0
23 TraesCS2D01G421300 chr4A 79.394 165 22 11 121 278 80174395 80174236 5.670000e-19 106.0
24 TraesCS2D01G421300 chr7D 88.462 78 7 2 1837 1913 95579449 95579525 4.410000e-15 93.5
25 TraesCS2D01G421300 chr1D 87.179 78 8 2 1837 1913 135063335 135063411 2.050000e-13 87.9
26 TraesCS2D01G421300 chr3B 87.719 57 5 1 4087 4143 305527937 305527883 9.620000e-07 65.8
27 TraesCS2D01G421300 chr3A 100.000 32 0 0 3681 3712 571804355 571804324 4.480000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G421300 chr2D 534954441 534958587 4146 True 7659.000000 7659 100.000000 1 4147 1 chr2D.!!$R1 4146
1 TraesCS2D01G421300 chr2B 636209011 636212517 3506 True 2010.000000 3273 90.213000 1 3165 2 chr2B.!!$R1 3164
2 TraesCS2D01G421300 chr2A 678189416 678193307 3891 True 1383.666667 2414 86.704667 1 4145 3 chr2A.!!$R1 4144
3 TraesCS2D01G421300 chr6B 700078595 700079246 651 True 675.000000 675 86.033000 1146 1787 1 chr6B.!!$R2 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 615 0.679002 AGTTCGATCGACTCCGGGAA 60.679 55.0 19.26 0.0 36.24 3.97 F
1158 1517 0.037160 TTCCTTTGCTCCCCCGTTAC 59.963 55.0 0.00 0.0 0.00 2.50 F
1452 1840 0.746659 AAGCTTGGTGTTTCACTGCC 59.253 50.0 0.00 0.0 34.40 4.85 F
2381 2804 0.883833 CCACAGTGCCAAGATGAACC 59.116 55.0 0.00 0.0 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1424 1812 0.178981 ACACCAAGCTTCAGCCACAT 60.179 50.000 0.0 0.0 43.38 3.21 R
2381 2804 0.374758 CTGCGAACAATGATGGTCCG 59.625 55.000 0.0 0.0 40.34 4.79 R
3143 3579 1.134946 GAACAAGGCAACACACTGCTT 59.865 47.619 0.0 0.0 42.25 3.91 R
3725 4217 0.036199 CCGGGGTGGAACAAACGATA 60.036 55.000 0.0 0.0 44.16 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 60 4.041444 TCATGGCAACCCAAAATTAAGCTT 59.959 37.500 3.48 3.48 46.14 3.74
68 70 5.401550 CCAAAATTAAGCTTCAATCGCTCA 58.598 37.500 0.00 0.00 36.56 4.26
80 82 4.183865 TCAATCGCTCACTTCATGGTAAG 58.816 43.478 0.00 0.00 0.00 2.34
89 112 5.827756 TCACTTCATGGTAAGTCCTAGAGA 58.172 41.667 0.00 0.00 37.61 3.10
99 122 2.759538 GTCCTAGAGACCACGAATCG 57.240 55.000 0.00 0.00 39.84 3.34
141 165 1.202428 GGCGCTAGAACCCTAGAACTG 60.202 57.143 7.64 0.00 44.00 3.16
166 190 3.379445 ACGCGACGGACCTTGGAT 61.379 61.111 15.93 0.00 0.00 3.41
336 360 2.042843 GAAGGAGGAGGGCTCGGA 60.043 66.667 0.00 0.00 0.00 4.55
338 362 3.687828 AAGGAGGAGGGCTCGGAGG 62.688 68.421 7.20 0.00 0.00 4.30
400 424 3.585862 GAGCACCGTCACTAATTTCTCA 58.414 45.455 0.00 0.00 0.00 3.27
442 466 2.276201 CAACCAATCGAGTCGCCATTA 58.724 47.619 7.92 0.00 0.00 1.90
443 467 1.935933 ACCAATCGAGTCGCCATTAC 58.064 50.000 7.92 0.00 0.00 1.89
444 468 1.206132 ACCAATCGAGTCGCCATTACA 59.794 47.619 7.92 0.00 0.00 2.41
446 470 2.267426 CAATCGAGTCGCCATTACACA 58.733 47.619 7.92 0.00 0.00 3.72
590 615 0.679002 AGTTCGATCGACTCCGGGAA 60.679 55.000 19.26 0.00 36.24 3.97
613 638 2.427245 CCGCTCCACCAGACCCTAG 61.427 68.421 0.00 0.00 0.00 3.02
686 711 4.715130 CCGGTGACCTGAGGGGGA 62.715 72.222 2.38 0.00 40.03 4.81
739 1047 2.903784 CGAGGGGATCTCTCTCTCTCTA 59.096 54.545 8.79 0.00 40.30 2.43
747 1077 5.249393 GGATCTCTCTCTCTCTATCTCTGGT 59.751 48.000 0.00 0.00 0.00 4.00
755 1085 7.001674 TCTCTCTCTATCTCTGGTTTATGTCC 58.998 42.308 0.00 0.00 0.00 4.02
1115 1472 2.302019 AGCAGGTAAAGGCTCTCCC 58.698 57.895 0.00 0.00 34.76 4.30
1117 1474 1.915983 CAGGTAAAGGCTCTCCCCC 59.084 63.158 0.00 0.00 0.00 5.40
1125 1482 2.693017 GCTCTCCCCCTCTCCTCA 59.307 66.667 0.00 0.00 0.00 3.86
1144 1501 1.215647 CCGTGTAGCGCTCTTCCTT 59.784 57.895 16.34 0.00 39.71 3.36
1157 1516 0.326927 CTTCCTTTGCTCCCCCGTTA 59.673 55.000 0.00 0.00 0.00 3.18
1158 1517 0.037160 TTCCTTTGCTCCCCCGTTAC 59.963 55.000 0.00 0.00 0.00 2.50
1187 1546 1.898574 CCGGGTGCTTGGGATATGC 60.899 63.158 0.00 0.00 0.00 3.14
1235 1594 4.503817 GCCATGTATGCTTAGATCTGTCCA 60.504 45.833 5.18 0.00 0.00 4.02
1245 1604 2.475155 AGATCTGTCCATGGAGAAGCA 58.525 47.619 16.81 8.74 0.00 3.91
1248 1607 1.022735 CTGTCCATGGAGAAGCATGC 58.977 55.000 16.81 10.51 0.00 4.06
1296 1681 2.280628 GGTATCTTTGCGGTCAGAAGG 58.719 52.381 0.00 0.00 0.00 3.46
1356 1741 8.937634 AGGTTACTACTGTGGTAATTTTATCG 57.062 34.615 17.85 0.00 32.78 2.92
1390 1776 1.896220 TGATTTCTGCTGTTTCCGCT 58.104 45.000 0.00 0.00 0.00 5.52
1414 1800 4.697514 AGTCGTTAGCAGCATGTCATTAT 58.302 39.130 0.00 0.00 39.31 1.28
1424 1812 5.406477 GCAGCATGTCATTATCGTCTTATGA 59.594 40.000 0.00 0.00 39.31 2.15
1452 1840 0.746659 AAGCTTGGTGTTTCACTGCC 59.253 50.000 0.00 0.00 34.40 4.85
1511 1900 1.337071 TCTTGGTGTCTGTCGAGTGAC 59.663 52.381 9.92 9.92 45.71 3.67
1523 1912 3.760537 GTCGAGTGACAGTGTCTATTCC 58.239 50.000 23.29 7.94 44.82 3.01
1532 1921 5.465390 TGACAGTGTCTATTCCGAAAAGTTG 59.535 40.000 23.29 0.00 33.15 3.16
1560 1952 6.528072 GCAGTAGCCTTTGTATTGTTCATTTC 59.472 38.462 0.00 0.00 33.58 2.17
1776 2199 7.707624 TCTCTTTTTGATCCAATGTAATGCT 57.292 32.000 0.00 0.00 0.00 3.79
1815 2238 6.690957 TGTTTTCTGTTCAATTTAGCACGAAG 59.309 34.615 0.00 0.00 0.00 3.79
1821 2244 3.674997 TCAATTTAGCACGAAGAAGGCT 58.325 40.909 0.00 0.00 41.51 4.58
1928 2351 6.014647 TCGATGGTAAACTATAGTAGGCCAT 58.985 40.000 23.62 23.62 36.28 4.40
1989 2412 4.952262 TGCTAGTCTTGATGAATGCAAC 57.048 40.909 0.00 0.00 0.00 4.17
2008 2431 4.034510 GCAACTATGTGTGCCTAAGATCAC 59.965 45.833 0.00 0.00 0.00 3.06
2083 2506 8.197592 TGAACCTAGTAAATTCTCAGTTGGTA 57.802 34.615 0.00 0.00 0.00 3.25
2105 2528 9.374711 TGGTATAGTGATTGTCATTGGTAGATA 57.625 33.333 0.00 0.00 0.00 1.98
2176 2599 9.733556 AATTGTACCATGTACTGTTTCTTGATA 57.266 29.630 6.02 0.00 0.00 2.15
2258 2681 6.040391 TGTGCCTTATTTTCTGTTAAGCTTGT 59.960 34.615 9.86 0.00 0.00 3.16
2381 2804 0.883833 CCACAGTGCCAAGATGAACC 59.116 55.000 0.00 0.00 0.00 3.62
2480 2903 7.337938 TCTGAGAACATAATGCATTGGTTCTA 58.662 34.615 35.81 26.65 41.49 2.10
2481 2904 7.828717 TCTGAGAACATAATGCATTGGTTCTAA 59.171 33.333 35.81 31.59 41.49 2.10
2501 2925 7.311092 TCTAACCTGTGGATTTCTAACTCAA 57.689 36.000 0.00 0.00 0.00 3.02
2502 2926 7.741785 TCTAACCTGTGGATTTCTAACTCAAA 58.258 34.615 0.00 0.00 0.00 2.69
2623 3049 1.604604 GCCAGTGCAGGTAAAACTCA 58.395 50.000 0.00 0.00 37.47 3.41
2637 3063 8.946085 CAGGTAAAACTCAATTACTCTTGCATA 58.054 33.333 0.00 0.00 34.44 3.14
2705 3131 4.202419 ACCCTTGTGCAGTTATGTTACTGA 60.202 41.667 7.88 0.00 46.72 3.41
2728 3155 7.910584 TGATACATACATGCTGTGATATTCCT 58.089 34.615 10.86 0.00 0.00 3.36
2729 3156 9.034800 TGATACATACATGCTGTGATATTCCTA 57.965 33.333 10.86 0.00 0.00 2.94
2801 3231 4.488126 TTTGTGCTGAAGTATGTTGCTC 57.512 40.909 0.00 0.00 0.00 4.26
2921 3351 2.092699 GCCTAAGCCCAGACTCTGATTT 60.093 50.000 7.69 2.04 32.44 2.17
3016 3452 4.693566 TGTTATCTGTCAAACCGAATGTCC 59.306 41.667 0.00 0.00 0.00 4.02
3098 3534 2.297033 GCCTGATTGTCCTTTTGCTCAA 59.703 45.455 0.00 0.00 0.00 3.02
3143 3579 8.043113 GCCCAGATGTGATATGATATTTACTCA 58.957 37.037 0.00 0.00 0.00 3.41
3169 3623 1.832167 TGTTGCCTTGTTCCCAGCC 60.832 57.895 0.00 0.00 0.00 4.85
3171 3625 1.228552 TTGCCTTGTTCCCAGCCTC 60.229 57.895 0.00 0.00 0.00 4.70
3192 3646 7.890655 AGCCTCAGGTTTTTAATCTAATGAAGT 59.109 33.333 0.00 0.00 0.00 3.01
3193 3647 7.970614 GCCTCAGGTTTTTAATCTAATGAAGTG 59.029 37.037 0.00 0.00 0.00 3.16
3218 3672 7.814107 TGAAACTAAATTTGATGACTGGCATTC 59.186 33.333 0.00 0.00 37.34 2.67
3235 3697 4.460505 GCATTCTTTGAAGTTGCAATTGC 58.539 39.130 23.69 23.69 42.50 3.56
3260 3722 9.169468 GCGATCAACTGTAACAAAATATTATGG 57.831 33.333 0.00 0.00 0.00 2.74
3298 3780 9.793252 GCAAAATATTATGGTGCATAATCTAGG 57.207 33.333 0.00 0.00 43.36 3.02
3303 3785 9.842775 ATATTATGGTGCATAATCTAGGATGTG 57.157 33.333 0.00 0.00 43.36 3.21
3304 3786 4.356405 TGGTGCATAATCTAGGATGTGG 57.644 45.455 0.00 0.00 0.00 4.17
3305 3787 3.716353 TGGTGCATAATCTAGGATGTGGT 59.284 43.478 0.00 0.00 0.00 4.16
3306 3788 4.165950 TGGTGCATAATCTAGGATGTGGTT 59.834 41.667 0.00 0.00 0.00 3.67
3307 3789 5.133221 GGTGCATAATCTAGGATGTGGTTT 58.867 41.667 0.00 0.00 0.00 3.27
3308 3790 5.594317 GGTGCATAATCTAGGATGTGGTTTT 59.406 40.000 0.00 0.00 0.00 2.43
3309 3791 6.460123 GGTGCATAATCTAGGATGTGGTTTTG 60.460 42.308 0.00 0.00 0.00 2.44
3310 3792 5.067674 TGCATAATCTAGGATGTGGTTTTGC 59.932 40.000 0.00 0.00 0.00 3.68
3311 3793 5.300286 GCATAATCTAGGATGTGGTTTTGCT 59.700 40.000 0.00 0.00 0.00 3.91
3312 3794 6.514048 GCATAATCTAGGATGTGGTTTTGCTC 60.514 42.308 0.00 0.00 0.00 4.26
3313 3795 2.972625 TCTAGGATGTGGTTTTGCTCG 58.027 47.619 0.00 0.00 0.00 5.03
3314 3796 2.301870 TCTAGGATGTGGTTTTGCTCGT 59.698 45.455 0.00 0.00 0.00 4.18
3315 3797 2.851263 AGGATGTGGTTTTGCTCGTA 57.149 45.000 0.00 0.00 0.00 3.43
3316 3798 3.350219 AGGATGTGGTTTTGCTCGTAT 57.650 42.857 0.00 0.00 0.00 3.06
3317 3799 3.270877 AGGATGTGGTTTTGCTCGTATC 58.729 45.455 0.00 0.00 0.00 2.24
3318 3800 3.055094 AGGATGTGGTTTTGCTCGTATCT 60.055 43.478 0.00 0.00 0.00 1.98
3319 3801 3.689649 GGATGTGGTTTTGCTCGTATCTT 59.310 43.478 0.00 0.00 0.00 2.40
3320 3802 4.873827 GGATGTGGTTTTGCTCGTATCTTA 59.126 41.667 0.00 0.00 0.00 2.10
3321 3803 5.527582 GGATGTGGTTTTGCTCGTATCTTAT 59.472 40.000 0.00 0.00 0.00 1.73
3322 3804 6.292919 GGATGTGGTTTTGCTCGTATCTTATC 60.293 42.308 0.00 0.00 0.00 1.75
3323 3805 5.730550 TGTGGTTTTGCTCGTATCTTATCT 58.269 37.500 0.00 0.00 0.00 1.98
3324 3806 5.580691 TGTGGTTTTGCTCGTATCTTATCTG 59.419 40.000 0.00 0.00 0.00 2.90
3325 3807 5.581085 GTGGTTTTGCTCGTATCTTATCTGT 59.419 40.000 0.00 0.00 0.00 3.41
3326 3808 6.755141 GTGGTTTTGCTCGTATCTTATCTGTA 59.245 38.462 0.00 0.00 0.00 2.74
3327 3809 7.277098 GTGGTTTTGCTCGTATCTTATCTGTAA 59.723 37.037 0.00 0.00 0.00 2.41
3328 3810 7.277098 TGGTTTTGCTCGTATCTTATCTGTAAC 59.723 37.037 0.00 0.00 0.00 2.50
3329 3811 7.328112 GTTTTGCTCGTATCTTATCTGTAACG 58.672 38.462 0.00 0.00 0.00 3.18
3330 3812 5.996669 TGCTCGTATCTTATCTGTAACGA 57.003 39.130 0.00 0.00 37.72 3.85
3331 3813 5.745514 TGCTCGTATCTTATCTGTAACGAC 58.254 41.667 0.00 0.00 35.69 4.34
3347 3829 3.851976 ACGACGAGTTAGCAGAGAATT 57.148 42.857 0.00 0.00 0.00 2.17
3349 3831 4.911053 ACGACGAGTTAGCAGAGAATTAG 58.089 43.478 0.00 0.00 0.00 1.73
3351 3833 5.123502 ACGACGAGTTAGCAGAGAATTAGAA 59.876 40.000 0.00 0.00 0.00 2.10
3352 3834 5.679355 CGACGAGTTAGCAGAGAATTAGAAG 59.321 44.000 0.00 0.00 0.00 2.85
3373 3855 6.385467 AGAAGAAAAGAGCTCCATATGTAGGT 59.615 38.462 10.93 0.00 0.00 3.08
3378 3860 8.492415 AAAAGAGCTCCATATGTAGGTATGTA 57.508 34.615 10.93 0.00 31.55 2.29
3384 3866 9.105844 AGCTCCATATGTAGGTATGTAGATTTT 57.894 33.333 0.00 0.00 31.55 1.82
3431 3913 8.997323 TCAGAATTCATCTTTCTTTGAACTCTC 58.003 33.333 8.44 0.00 36.58 3.20
3437 3919 4.235372 TCTTTCTTTGAACTCTCCCCTCT 58.765 43.478 0.00 0.00 0.00 3.69
3440 3922 3.169099 TCTTTGAACTCTCCCCTCTCTG 58.831 50.000 0.00 0.00 0.00 3.35
3443 3935 1.272760 TGAACTCTCCCCTCTCTGTCC 60.273 57.143 0.00 0.00 0.00 4.02
3451 3943 2.286523 CCTCTCTGTCCGCACCCTT 61.287 63.158 0.00 0.00 0.00 3.95
3459 3951 2.885644 CCGCACCCTTGATCGACG 60.886 66.667 0.00 0.00 0.00 5.12
3460 3952 2.180769 CGCACCCTTGATCGACGA 59.819 61.111 0.00 0.00 0.00 4.20
3461 3953 2.158959 CGCACCCTTGATCGACGAC 61.159 63.158 0.00 0.00 0.00 4.34
3462 3954 1.080093 GCACCCTTGATCGACGACA 60.080 57.895 0.00 0.00 0.00 4.35
3463 3955 0.460284 GCACCCTTGATCGACGACAT 60.460 55.000 0.00 0.00 0.00 3.06
3465 3957 1.660607 CACCCTTGATCGACGACATTG 59.339 52.381 0.00 0.00 0.00 2.82
3466 3958 1.275291 ACCCTTGATCGACGACATTGT 59.725 47.619 0.00 0.00 0.00 2.71
3468 3960 2.742053 CCCTTGATCGACGACATTGTTT 59.258 45.455 0.00 0.00 0.00 2.83
3472 3964 4.383774 TGATCGACGACATTGTTTTCAC 57.616 40.909 0.00 0.00 0.00 3.18
3473 3965 4.055360 TGATCGACGACATTGTTTTCACT 58.945 39.130 0.00 0.00 0.00 3.41
3474 3966 4.509970 TGATCGACGACATTGTTTTCACTT 59.490 37.500 0.00 0.00 0.00 3.16
3475 3967 4.868450 TCGACGACATTGTTTTCACTTT 57.132 36.364 0.00 0.00 0.00 2.66
3476 3968 4.583426 TCGACGACATTGTTTTCACTTTG 58.417 39.130 0.00 0.00 0.00 2.77
3477 3969 3.177643 CGACGACATTGTTTTCACTTTGC 59.822 43.478 0.00 0.00 0.00 3.68
3478 3970 4.351192 GACGACATTGTTTTCACTTTGCT 58.649 39.130 0.00 0.00 0.00 3.91
3479 3971 4.104776 ACGACATTGTTTTCACTTTGCTG 58.895 39.130 0.00 0.00 0.00 4.41
3480 3972 3.061006 CGACATTGTTTTCACTTTGCTGC 60.061 43.478 0.00 0.00 0.00 5.25
3488 3980 0.764890 TCACTTTGCTGCCACCTAGT 59.235 50.000 0.00 0.00 0.00 2.57
3511 4003 1.072505 GCCGAACCTCCTTGGACAA 59.927 57.895 0.00 0.00 39.71 3.18
3512 4004 0.536460 GCCGAACCTCCTTGGACAAA 60.536 55.000 0.00 0.00 39.71 2.83
3527 4019 6.183360 CCTTGGACAAAGCTATCGTTAAGAAG 60.183 42.308 0.00 0.00 34.24 2.85
3536 4028 3.963428 ATCGTTAAGAAGTCTGCCTGT 57.037 42.857 0.00 0.00 0.00 4.00
3539 4031 3.321111 TCGTTAAGAAGTCTGCCTGTCTT 59.679 43.478 0.00 0.00 34.74 3.01
3540 4032 3.430218 CGTTAAGAAGTCTGCCTGTCTTG 59.570 47.826 0.00 0.00 32.69 3.02
3541 4033 2.557920 AAGAAGTCTGCCTGTCTTGG 57.442 50.000 0.00 0.00 0.00 3.61
3542 4034 1.722034 AGAAGTCTGCCTGTCTTGGA 58.278 50.000 0.00 0.00 0.00 3.53
3544 4036 0.689623 AAGTCTGCCTGTCTTGGAGG 59.310 55.000 0.00 0.00 0.00 4.30
3551 4043 1.528129 CCTGTCTTGGAGGCTTCAAC 58.472 55.000 3.48 0.00 0.00 3.18
3552 4044 1.202806 CCTGTCTTGGAGGCTTCAACA 60.203 52.381 3.48 1.81 0.00 3.33
3553 4045 2.149578 CTGTCTTGGAGGCTTCAACAG 58.850 52.381 12.11 12.11 0.00 3.16
3554 4046 1.490490 TGTCTTGGAGGCTTCAACAGT 59.510 47.619 3.48 0.00 0.00 3.55
3555 4047 2.092429 TGTCTTGGAGGCTTCAACAGTT 60.092 45.455 3.48 0.00 0.00 3.16
3556 4048 2.550180 GTCTTGGAGGCTTCAACAGTTC 59.450 50.000 3.48 0.00 0.00 3.01
3557 4049 2.172505 TCTTGGAGGCTTCAACAGTTCA 59.827 45.455 3.48 0.00 0.00 3.18
3558 4050 2.727123 TGGAGGCTTCAACAGTTCAA 57.273 45.000 0.00 0.00 0.00 2.69
3559 4051 2.297701 TGGAGGCTTCAACAGTTCAAC 58.702 47.619 0.00 0.00 0.00 3.18
3560 4052 2.092429 TGGAGGCTTCAACAGTTCAACT 60.092 45.455 0.00 0.00 0.00 3.16
3561 4053 3.135712 TGGAGGCTTCAACAGTTCAACTA 59.864 43.478 0.00 0.00 0.00 2.24
3562 4054 3.748568 GGAGGCTTCAACAGTTCAACTAG 59.251 47.826 0.00 0.00 0.00 2.57
3563 4055 4.503296 GGAGGCTTCAACAGTTCAACTAGA 60.503 45.833 0.00 0.00 0.00 2.43
3564 4056 5.036117 AGGCTTCAACAGTTCAACTAGAA 57.964 39.130 0.00 0.00 0.00 2.10
3576 4068 3.323243 TCAACTAGAACTTTGCTACGGC 58.677 45.455 0.00 0.00 39.26 5.68
3577 4069 3.006537 TCAACTAGAACTTTGCTACGGCT 59.993 43.478 0.00 0.00 39.59 5.52
3578 4070 4.219070 TCAACTAGAACTTTGCTACGGCTA 59.781 41.667 0.00 0.00 39.59 3.93
3579 4071 4.107363 ACTAGAACTTTGCTACGGCTAC 57.893 45.455 0.00 0.00 39.59 3.58
3581 4073 0.997196 GAACTTTGCTACGGCTACGG 59.003 55.000 0.00 0.00 46.48 4.02
3582 4074 0.390735 AACTTTGCTACGGCTACGGG 60.391 55.000 0.00 0.00 46.48 5.28
3583 4075 2.125431 TTTGCTACGGCTACGGGC 60.125 61.111 0.00 0.00 46.48 6.13
3584 4076 2.845752 CTTTGCTACGGCTACGGGCA 62.846 60.000 5.12 6.09 45.62 5.36
3585 4077 2.845752 TTTGCTACGGCTACGGGCAG 62.846 60.000 5.12 3.48 46.83 4.85
3587 4079 2.890371 CTACGGCTACGGGCAGTT 59.110 61.111 12.46 0.40 46.49 3.16
3588 4080 1.217244 CTACGGCTACGGGCAGTTT 59.783 57.895 12.46 0.00 46.49 2.66
3589 4081 0.804933 CTACGGCTACGGGCAGTTTC 60.805 60.000 12.46 0.00 46.49 2.78
3590 4082 1.252904 TACGGCTACGGGCAGTTTCT 61.253 55.000 12.46 0.00 46.49 2.52
3591 4083 1.252904 ACGGCTACGGGCAGTTTCTA 61.253 55.000 0.00 0.00 46.49 2.10
3592 4084 0.804933 CGGCTACGGGCAGTTTCTAC 60.805 60.000 0.00 0.00 44.01 2.59
3593 4085 0.804933 GGCTACGGGCAGTTTCTACG 60.805 60.000 0.00 0.00 44.01 3.51
3594 4086 0.804933 GCTACGGGCAGTTTCTACGG 60.805 60.000 0.00 0.00 41.35 4.02
3595 4087 0.813184 CTACGGGCAGTTTCTACGGA 59.187 55.000 0.00 0.00 0.00 4.69
3596 4088 1.203052 CTACGGGCAGTTTCTACGGAA 59.797 52.381 0.00 0.00 0.00 4.30
3597 4089 0.393820 ACGGGCAGTTTCTACGGAAA 59.606 50.000 0.00 0.00 38.90 3.13
3598 4090 1.076332 CGGGCAGTTTCTACGGAAAG 58.924 55.000 0.00 0.00 41.43 2.62
3599 4091 1.607251 CGGGCAGTTTCTACGGAAAGT 60.607 52.381 0.00 0.00 43.49 2.66
3612 4104 3.991605 CGGAAAGTGTTTACGGAGATG 57.008 47.619 0.00 0.00 43.13 2.90
3613 4105 3.581755 CGGAAAGTGTTTACGGAGATGA 58.418 45.455 0.00 0.00 43.13 2.92
3614 4106 3.612860 CGGAAAGTGTTTACGGAGATGAG 59.387 47.826 0.00 0.00 43.13 2.90
3615 4107 3.371285 GGAAAGTGTTTACGGAGATGAGC 59.629 47.826 0.00 0.00 0.00 4.26
3616 4108 3.963428 AAGTGTTTACGGAGATGAGCT 57.037 42.857 0.00 0.00 0.00 4.09
3617 4109 3.238108 AGTGTTTACGGAGATGAGCTG 57.762 47.619 0.00 0.00 0.00 4.24
3618 4110 2.093973 AGTGTTTACGGAGATGAGCTGG 60.094 50.000 0.00 0.00 0.00 4.85
3619 4111 2.094182 GTGTTTACGGAGATGAGCTGGA 60.094 50.000 0.00 0.00 0.00 3.86
3620 4112 2.166459 TGTTTACGGAGATGAGCTGGAG 59.834 50.000 0.00 0.00 0.00 3.86
3621 4113 2.427453 GTTTACGGAGATGAGCTGGAGA 59.573 50.000 0.00 0.00 0.00 3.71
3622 4114 1.681538 TACGGAGATGAGCTGGAGAC 58.318 55.000 0.00 0.00 0.00 3.36
3623 4115 1.040339 ACGGAGATGAGCTGGAGACC 61.040 60.000 0.00 0.00 0.00 3.85
3624 4116 0.754957 CGGAGATGAGCTGGAGACCT 60.755 60.000 0.00 0.00 0.00 3.85
3625 4117 1.477740 CGGAGATGAGCTGGAGACCTA 60.478 57.143 0.00 0.00 0.00 3.08
3626 4118 2.238521 GGAGATGAGCTGGAGACCTAG 58.761 57.143 0.00 0.00 0.00 3.02
3627 4119 2.238521 GAGATGAGCTGGAGACCTAGG 58.761 57.143 7.41 7.41 0.00 3.02
3628 4120 1.856259 AGATGAGCTGGAGACCTAGGA 59.144 52.381 17.98 0.00 0.00 2.94
3629 4121 2.450500 AGATGAGCTGGAGACCTAGGAT 59.549 50.000 17.98 2.87 0.00 3.24
3630 4122 2.856760 TGAGCTGGAGACCTAGGATT 57.143 50.000 17.98 2.09 0.00 3.01
3631 4123 2.672098 TGAGCTGGAGACCTAGGATTC 58.328 52.381 17.98 12.02 0.00 2.52
3632 4124 2.023984 TGAGCTGGAGACCTAGGATTCA 60.024 50.000 17.98 7.68 0.00 2.57
3633 4125 3.238597 GAGCTGGAGACCTAGGATTCAT 58.761 50.000 17.98 0.00 0.00 2.57
3634 4126 3.238597 AGCTGGAGACCTAGGATTCATC 58.761 50.000 17.98 1.34 0.00 2.92
3635 4127 2.968574 GCTGGAGACCTAGGATTCATCA 59.031 50.000 17.98 5.30 0.00 3.07
3636 4128 3.244044 GCTGGAGACCTAGGATTCATCAC 60.244 52.174 17.98 0.12 0.00 3.06
3637 4129 3.963374 CTGGAGACCTAGGATTCATCACA 59.037 47.826 17.98 4.85 0.00 3.58
3638 4130 4.361783 TGGAGACCTAGGATTCATCACAA 58.638 43.478 17.98 0.00 0.00 3.33
3639 4131 4.162320 TGGAGACCTAGGATTCATCACAAC 59.838 45.833 17.98 0.00 0.00 3.32
3640 4132 4.407296 GGAGACCTAGGATTCATCACAACT 59.593 45.833 17.98 0.00 0.00 3.16
3641 4133 5.104735 GGAGACCTAGGATTCATCACAACTT 60.105 44.000 17.98 0.00 0.00 2.66
3642 4134 5.738909 AGACCTAGGATTCATCACAACTTG 58.261 41.667 17.98 0.00 0.00 3.16
3643 4135 4.848357 ACCTAGGATTCATCACAACTTGG 58.152 43.478 17.98 0.00 0.00 3.61
3644 4136 4.202441 CCTAGGATTCATCACAACTTGGG 58.798 47.826 1.05 0.00 0.00 4.12
3645 4137 3.814504 AGGATTCATCACAACTTGGGT 57.185 42.857 0.00 0.00 0.00 4.51
3646 4138 3.690460 AGGATTCATCACAACTTGGGTC 58.310 45.455 0.00 0.00 0.00 4.46
3647 4139 2.755103 GGATTCATCACAACTTGGGTCC 59.245 50.000 0.00 0.00 0.00 4.46
3648 4140 2.286365 TTCATCACAACTTGGGTCCC 57.714 50.000 0.00 0.00 0.00 4.46
3649 4141 1.144691 TCATCACAACTTGGGTCCCA 58.855 50.000 6.47 6.47 0.00 4.37
3650 4142 1.202879 TCATCACAACTTGGGTCCCAC 60.203 52.381 11.24 0.00 30.78 4.61
3651 4143 0.850100 ATCACAACTTGGGTCCCACA 59.150 50.000 11.24 1.10 30.78 4.17
3652 4144 0.182537 TCACAACTTGGGTCCCACAG 59.817 55.000 11.24 13.68 30.78 3.66
3653 4145 1.152756 ACAACTTGGGTCCCACAGC 60.153 57.895 11.24 0.00 30.78 4.40
3654 4146 1.151450 CAACTTGGGTCCCACAGCT 59.849 57.895 11.24 0.07 30.78 4.24
3655 4147 0.400213 CAACTTGGGTCCCACAGCTA 59.600 55.000 11.24 0.00 30.78 3.32
3656 4148 1.145571 AACTTGGGTCCCACAGCTAA 58.854 50.000 11.24 0.00 30.78 3.09
3657 4149 0.400594 ACTTGGGTCCCACAGCTAAC 59.599 55.000 11.24 0.00 30.78 2.34
3658 4150 0.693049 CTTGGGTCCCACAGCTAACT 59.307 55.000 11.24 0.00 30.78 2.24
3659 4151 1.073923 CTTGGGTCCCACAGCTAACTT 59.926 52.381 11.24 0.00 30.78 2.66
3660 4152 1.145571 TGGGTCCCACAGCTAACTTT 58.854 50.000 6.47 0.00 0.00 2.66
3661 4153 2.340731 TGGGTCCCACAGCTAACTTTA 58.659 47.619 6.47 0.00 0.00 1.85
3662 4154 2.916934 TGGGTCCCACAGCTAACTTTAT 59.083 45.455 6.47 0.00 0.00 1.40
3663 4155 3.279434 GGGTCCCACAGCTAACTTTATG 58.721 50.000 1.78 0.00 0.00 1.90
3664 4156 3.279434 GGTCCCACAGCTAACTTTATGG 58.721 50.000 0.00 0.00 0.00 2.74
3665 4157 3.279434 GTCCCACAGCTAACTTTATGGG 58.721 50.000 0.37 0.37 46.97 4.00
3666 4158 2.241176 TCCCACAGCTAACTTTATGGGG 59.759 50.000 7.25 0.00 45.84 4.96
3667 4159 2.241176 CCCACAGCTAACTTTATGGGGA 59.759 50.000 0.00 0.00 42.69 4.81
3668 4160 3.545703 CCACAGCTAACTTTATGGGGAG 58.454 50.000 0.00 0.00 38.59 4.30
3669 4161 3.199946 CCACAGCTAACTTTATGGGGAGA 59.800 47.826 0.00 0.00 38.59 3.71
3670 4162 4.324254 CCACAGCTAACTTTATGGGGAGAA 60.324 45.833 0.00 0.00 38.59 2.87
3671 4163 5.253330 CACAGCTAACTTTATGGGGAGAAA 58.747 41.667 0.00 0.00 0.00 2.52
3672 4164 5.710099 CACAGCTAACTTTATGGGGAGAAAA 59.290 40.000 0.00 0.00 0.00 2.29
3673 4165 6.378280 CACAGCTAACTTTATGGGGAGAAAAT 59.622 38.462 0.00 0.00 0.00 1.82
3674 4166 6.603599 ACAGCTAACTTTATGGGGAGAAAATC 59.396 38.462 0.00 0.00 0.00 2.17
3675 4167 6.603201 CAGCTAACTTTATGGGGAGAAAATCA 59.397 38.462 0.00 0.00 0.00 2.57
3676 4168 7.122650 CAGCTAACTTTATGGGGAGAAAATCAA 59.877 37.037 0.00 0.00 0.00 2.57
3677 4169 7.841222 AGCTAACTTTATGGGGAGAAAATCAAT 59.159 33.333 0.00 0.00 0.00 2.57
3678 4170 7.922811 GCTAACTTTATGGGGAGAAAATCAATG 59.077 37.037 0.00 0.00 0.00 2.82
3679 4171 6.225981 ACTTTATGGGGAGAAAATCAATGC 57.774 37.500 0.00 0.00 0.00 3.56
3680 4172 5.129320 ACTTTATGGGGAGAAAATCAATGCC 59.871 40.000 0.00 0.00 0.00 4.40
3681 4173 1.864669 TGGGGAGAAAATCAATGCCC 58.135 50.000 0.00 0.00 34.79 5.36
3682 4174 0.746659 GGGGAGAAAATCAATGCCCG 59.253 55.000 0.00 0.00 36.41 6.13
3683 4175 1.474330 GGGAGAAAATCAATGCCCGT 58.526 50.000 0.00 0.00 0.00 5.28
3684 4176 2.650322 GGGAGAAAATCAATGCCCGTA 58.350 47.619 0.00 0.00 0.00 4.02
3685 4177 2.618709 GGGAGAAAATCAATGCCCGTAG 59.381 50.000 0.00 0.00 0.00 3.51
3686 4178 3.279434 GGAGAAAATCAATGCCCGTAGT 58.721 45.455 0.00 0.00 0.00 2.73
3687 4179 3.065371 GGAGAAAATCAATGCCCGTAGTG 59.935 47.826 0.00 0.00 0.00 2.74
3688 4180 3.016736 AGAAAATCAATGCCCGTAGTGG 58.983 45.455 0.00 0.00 37.55 4.00
3701 4193 4.467198 CCGTAGTGGGATTTCTGTAAGT 57.533 45.455 0.00 0.00 33.76 2.24
3702 4194 4.430908 CCGTAGTGGGATTTCTGTAAGTC 58.569 47.826 0.00 0.00 33.76 3.01
3703 4195 4.159879 CCGTAGTGGGATTTCTGTAAGTCT 59.840 45.833 0.00 0.00 33.76 3.24
3704 4196 5.359009 CCGTAGTGGGATTTCTGTAAGTCTA 59.641 44.000 0.00 0.00 33.76 2.59
3705 4197 6.459848 CCGTAGTGGGATTTCTGTAAGTCTAG 60.460 46.154 0.00 0.00 33.76 2.43
3706 4198 5.346181 AGTGGGATTTCTGTAAGTCTAGC 57.654 43.478 0.00 0.00 33.76 3.42
3707 4199 4.777896 AGTGGGATTTCTGTAAGTCTAGCA 59.222 41.667 0.00 0.00 33.76 3.49
3708 4200 5.426833 AGTGGGATTTCTGTAAGTCTAGCAT 59.573 40.000 0.00 0.00 33.76 3.79
3709 4201 6.069963 AGTGGGATTTCTGTAAGTCTAGCATT 60.070 38.462 0.00 0.00 33.76 3.56
3710 4202 6.599638 GTGGGATTTCTGTAAGTCTAGCATTT 59.400 38.462 0.00 0.00 33.76 2.32
3711 4203 7.121315 GTGGGATTTCTGTAAGTCTAGCATTTT 59.879 37.037 0.00 0.00 33.76 1.82
3712 4204 7.121168 TGGGATTTCTGTAAGTCTAGCATTTTG 59.879 37.037 0.00 0.00 33.76 2.44
3713 4205 6.969473 GGATTTCTGTAAGTCTAGCATTTTGC 59.031 38.462 0.00 0.00 38.51 3.68
3714 4206 7.148171 GGATTTCTGTAAGTCTAGCATTTTGCT 60.148 37.037 7.24 7.24 46.53 3.91
3715 4207 7.510549 TTTCTGTAAGTCTAGCATTTTGCTT 57.489 32.000 7.39 0.00 43.73 3.91
3716 4208 6.486253 TCTGTAAGTCTAGCATTTTGCTTG 57.514 37.500 7.39 5.98 43.73 4.01
3717 4209 5.412594 TCTGTAAGTCTAGCATTTTGCTTGG 59.587 40.000 7.39 2.09 43.73 3.61
3718 4210 7.518697 TCTGTAAGTCTAGCATTTTGCTTGGG 61.519 42.308 7.39 0.00 43.73 4.12
3724 4216 1.292992 GCATTTTGCTTGGGCTATGC 58.707 50.000 1.59 1.59 40.96 3.14
3725 4217 1.134610 GCATTTTGCTTGGGCTATGCT 60.135 47.619 9.98 0.00 40.96 3.79
3726 4218 2.101249 GCATTTTGCTTGGGCTATGCTA 59.899 45.455 9.98 0.00 40.96 3.49
3727 4219 3.243975 GCATTTTGCTTGGGCTATGCTAT 60.244 43.478 9.98 0.00 40.96 2.97
3728 4220 4.553323 CATTTTGCTTGGGCTATGCTATC 58.447 43.478 9.98 0.00 39.59 2.08
3729 4221 1.882912 TTGCTTGGGCTATGCTATCG 58.117 50.000 9.98 0.00 39.59 2.92
3730 4222 0.758734 TGCTTGGGCTATGCTATCGT 59.241 50.000 9.98 0.00 39.59 3.73
3731 4223 1.140852 TGCTTGGGCTATGCTATCGTT 59.859 47.619 9.98 0.00 39.59 3.85
3732 4224 2.222027 GCTTGGGCTATGCTATCGTTT 58.778 47.619 1.33 0.00 35.22 3.60
3733 4225 2.031682 GCTTGGGCTATGCTATCGTTTG 60.032 50.000 1.33 0.00 35.22 2.93
3734 4226 3.206150 CTTGGGCTATGCTATCGTTTGT 58.794 45.455 0.00 0.00 0.00 2.83
3735 4227 3.275617 TGGGCTATGCTATCGTTTGTT 57.724 42.857 0.00 0.00 0.00 2.83
3736 4228 3.202906 TGGGCTATGCTATCGTTTGTTC 58.797 45.455 0.00 0.00 0.00 3.18
3737 4229 2.548480 GGGCTATGCTATCGTTTGTTCC 59.452 50.000 0.00 0.00 0.00 3.62
3738 4230 3.202906 GGCTATGCTATCGTTTGTTCCA 58.797 45.455 0.00 0.00 0.00 3.53
3739 4231 3.002348 GGCTATGCTATCGTTTGTTCCAC 59.998 47.826 0.00 0.00 0.00 4.02
3740 4232 3.002348 GCTATGCTATCGTTTGTTCCACC 59.998 47.826 0.00 0.00 0.00 4.61
3741 4233 1.816074 TGCTATCGTTTGTTCCACCC 58.184 50.000 0.00 0.00 0.00 4.61
3742 4234 1.092348 GCTATCGTTTGTTCCACCCC 58.908 55.000 0.00 0.00 0.00 4.95
3743 4235 1.365699 CTATCGTTTGTTCCACCCCG 58.634 55.000 0.00 0.00 0.00 5.73
3744 4236 0.036199 TATCGTTTGTTCCACCCCGG 60.036 55.000 0.00 0.00 0.00 5.73
3745 4237 1.770749 ATCGTTTGTTCCACCCCGGA 61.771 55.000 0.73 0.00 44.40 5.14
3746 4238 1.302993 CGTTTGTTCCACCCCGGAT 60.303 57.895 0.73 0.00 45.80 4.18
3747 4239 1.303091 CGTTTGTTCCACCCCGGATC 61.303 60.000 0.73 0.00 45.80 3.36
3748 4240 0.250989 GTTTGTTCCACCCCGGATCA 60.251 55.000 0.73 0.00 45.80 2.92
3749 4241 0.250989 TTTGTTCCACCCCGGATCAC 60.251 55.000 0.73 0.00 45.80 3.06
3750 4242 1.419720 TTGTTCCACCCCGGATCACA 61.420 55.000 0.73 0.00 45.80 3.58
3762 4254 1.291877 GGATCACACTGGCACGACAC 61.292 60.000 0.00 0.00 0.00 3.67
3763 4255 1.617755 GATCACACTGGCACGACACG 61.618 60.000 0.00 0.00 0.00 4.49
3764 4256 2.082629 ATCACACTGGCACGACACGA 62.083 55.000 0.00 0.00 0.00 4.35
3765 4257 2.027605 ACACTGGCACGACACGAG 59.972 61.111 0.00 0.00 0.00 4.18
3766 4258 2.027605 CACTGGCACGACACGAGT 59.972 61.111 0.00 0.00 0.00 4.18
3767 4259 2.027605 ACTGGCACGACACGAGTG 59.972 61.111 1.13 1.13 42.15 3.51
3769 4261 1.591594 CTGGCACGACACGAGTGTT 60.592 57.895 10.42 0.00 45.05 3.32
3783 4275 3.724295 GAGTGTTCGACCAAATGTAGC 57.276 47.619 0.00 0.00 0.00 3.58
3784 4276 2.066262 AGTGTTCGACCAAATGTAGCG 58.934 47.619 0.00 0.00 0.00 4.26
3785 4277 1.127951 GTGTTCGACCAAATGTAGCGG 59.872 52.381 0.00 0.00 0.00 5.52
3786 4278 1.001068 TGTTCGACCAAATGTAGCGGA 59.999 47.619 0.00 0.00 0.00 5.54
3787 4279 2.070783 GTTCGACCAAATGTAGCGGAA 58.929 47.619 0.00 0.00 0.00 4.30
3788 4280 2.676342 GTTCGACCAAATGTAGCGGAAT 59.324 45.455 0.00 0.00 0.00 3.01
3789 4281 2.276201 TCGACCAAATGTAGCGGAATG 58.724 47.619 0.00 0.00 0.00 2.67
3790 4282 1.268032 CGACCAAATGTAGCGGAATGC 60.268 52.381 0.00 0.00 46.98 3.56
3825 4317 1.456296 ACACGATGGCTACGTACTCA 58.544 50.000 8.83 0.00 42.07 3.41
3827 4319 2.426024 ACACGATGGCTACGTACTCAAT 59.574 45.455 8.83 0.00 42.07 2.57
3828 4320 2.789339 CACGATGGCTACGTACTCAATG 59.211 50.000 8.83 0.00 42.07 2.82
3844 4336 7.065085 CGTACTCAATGAAAGAGGATGAATTGT 59.935 37.037 0.00 0.00 35.39 2.71
3860 4352 4.400567 TGAATTGTTGTGTGATGTGTGGAA 59.599 37.500 0.00 0.00 0.00 3.53
3869 4361 3.066621 TGTGATGTGTGGAAGTTTCAAGC 59.933 43.478 0.00 0.00 0.00 4.01
3880 4372 2.778299 AGTTTCAAGCCACGAAGCATA 58.222 42.857 0.00 0.00 34.23 3.14
3881 4373 3.146066 AGTTTCAAGCCACGAAGCATAA 58.854 40.909 0.00 0.00 34.23 1.90
3882 4374 3.758554 AGTTTCAAGCCACGAAGCATAAT 59.241 39.130 0.00 0.00 34.23 1.28
3883 4375 3.763097 TTCAAGCCACGAAGCATAATG 57.237 42.857 0.00 0.00 34.23 1.90
3884 4376 1.401552 TCAAGCCACGAAGCATAATGC 59.598 47.619 0.00 0.00 45.46 3.56
3921 4413 5.957798 AGTGTGCATATTTGGTTCAATGAG 58.042 37.500 0.00 0.00 0.00 2.90
3923 4415 3.792956 GTGCATATTTGGTTCAATGAGCG 59.207 43.478 0.00 0.00 0.00 5.03
3927 4419 2.879002 TTTGGTTCAATGAGCGCAAA 57.121 40.000 11.47 0.00 0.00 3.68
3943 4435 2.409752 CGCAAACACTACACAGCTTACG 60.410 50.000 0.00 0.00 0.00 3.18
3954 4446 4.987832 ACACAGCTTACGACATAGAAGAG 58.012 43.478 0.00 0.00 0.00 2.85
3955 4447 4.700692 ACACAGCTTACGACATAGAAGAGA 59.299 41.667 0.00 0.00 0.00 3.10
3956 4448 5.358442 ACACAGCTTACGACATAGAAGAGAT 59.642 40.000 0.00 0.00 0.00 2.75
3957 4449 5.912396 CACAGCTTACGACATAGAAGAGATC 59.088 44.000 0.00 0.00 0.00 2.75
3958 4450 5.825679 ACAGCTTACGACATAGAAGAGATCT 59.174 40.000 0.00 0.00 42.48 2.75
3959 4451 6.993308 ACAGCTTACGACATAGAAGAGATCTA 59.007 38.462 0.00 0.00 44.60 1.98
3972 4464 7.470935 AGAAGAGATCTATGATCATGGACAG 57.529 40.000 22.45 10.07 36.32 3.51
3974 4466 7.395206 AGAAGAGATCTATGATCATGGACAGAG 59.605 40.741 22.45 9.01 36.32 3.35
3975 4467 5.953548 AGAGATCTATGATCATGGACAGAGG 59.046 44.000 22.45 1.78 31.01 3.69
3976 4468 5.653346 AGATCTATGATCATGGACAGAGGT 58.347 41.667 22.45 7.07 31.01 3.85
3977 4469 6.798766 AGATCTATGATCATGGACAGAGGTA 58.201 40.000 22.45 0.00 31.01 3.08
3978 4470 6.663093 AGATCTATGATCATGGACAGAGGTAC 59.337 42.308 22.45 8.45 31.01 3.34
3979 4471 5.080337 TCTATGATCATGGACAGAGGTACC 58.920 45.833 17.04 2.73 0.00 3.34
3980 4472 3.404869 TGATCATGGACAGAGGTACCT 57.595 47.619 16.26 16.26 0.00 3.08
3981 4473 3.033909 TGATCATGGACAGAGGTACCTG 58.966 50.000 22.10 9.65 39.93 4.00
3982 4474 1.195115 TCATGGACAGAGGTACCTGC 58.805 55.000 22.10 11.15 37.68 4.85
3983 4475 0.179000 CATGGACAGAGGTACCTGCC 59.821 60.000 22.10 15.18 37.68 4.85
3985 4477 2.368011 GGACAGAGGTACCTGCCCC 61.368 68.421 22.10 11.11 37.68 5.80
3986 4478 1.612442 GACAGAGGTACCTGCCCCA 60.612 63.158 22.10 0.00 37.68 4.96
3987 4479 0.983378 GACAGAGGTACCTGCCCCAT 60.983 60.000 22.10 0.00 37.68 4.00
3988 4480 0.550147 ACAGAGGTACCTGCCCCATT 60.550 55.000 22.10 0.00 37.68 3.16
3989 4481 0.107017 CAGAGGTACCTGCCCCATTG 60.107 60.000 22.10 2.28 0.00 2.82
3991 4483 0.846693 GAGGTACCTGCCCCATTGAT 59.153 55.000 22.10 0.00 0.00 2.57
3992 4484 0.552848 AGGTACCTGCCCCATTGATG 59.447 55.000 15.42 0.00 0.00 3.07
3994 4486 0.258774 GTACCTGCCCCATTGATGGT 59.741 55.000 9.07 0.00 46.65 3.55
3996 4488 0.258774 ACCTGCCCCATTGATGGTAC 59.741 55.000 9.07 1.64 46.65 3.34
3997 4489 0.258484 CCTGCCCCATTGATGGTACA 59.742 55.000 9.07 5.82 46.65 2.90
4011 4503 3.951775 TGGTACACCATTCAAAATGCC 57.048 42.857 0.00 0.00 42.01 4.40
4012 4504 2.230025 TGGTACACCATTCAAAATGCCG 59.770 45.455 0.00 0.00 42.01 5.69
4013 4505 2.230266 GGTACACCATTCAAAATGCCGT 59.770 45.455 0.00 0.00 35.64 5.68
4014 4506 2.723124 ACACCATTCAAAATGCCGTC 57.277 45.000 0.00 0.00 0.00 4.79
4015 4507 1.959985 ACACCATTCAAAATGCCGTCA 59.040 42.857 0.00 0.00 0.00 4.35
4016 4508 2.363680 ACACCATTCAAAATGCCGTCAA 59.636 40.909 0.00 0.00 0.00 3.18
4095 4588 1.680338 AGTTTCCGTTCTTGCTGCTT 58.320 45.000 0.00 0.00 0.00 3.91
4105 4598 3.921119 TCTTGCTGCTTTATGTGTTGG 57.079 42.857 0.00 0.00 0.00 3.77
4145 4638 5.390145 GCTCAATGTTGCAATTTGTTGATCC 60.390 40.000 18.80 10.49 0.00 3.36
4146 4639 4.996122 TCAATGTTGCAATTTGTTGATCCC 59.004 37.500 18.80 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 60 2.768253 ACCATGAAGTGAGCGATTGA 57.232 45.000 0.00 0.00 0.00 2.57
68 70 4.957327 GGTCTCTAGGACTTACCATGAAGT 59.043 45.833 0.00 0.00 43.97 3.01
80 82 1.268640 GCGATTCGTGGTCTCTAGGAC 60.269 57.143 8.03 3.50 43.79 3.85
89 112 1.847890 CGGGTTTTGCGATTCGTGGT 61.848 55.000 8.03 0.00 0.00 4.16
99 122 1.595929 TCACGAGGACGGGTTTTGC 60.596 57.895 0.00 0.00 44.00 3.68
141 165 4.415332 TCCGTCGCGTGCTCTTCC 62.415 66.667 5.77 0.00 0.00 3.46
163 187 2.631580 CGCCCTCCTCGAGCTATCC 61.632 68.421 6.99 0.00 0.00 2.59
166 190 2.044252 AACGCCCTCCTCGAGCTA 60.044 61.111 6.99 0.00 0.00 3.32
336 360 2.456287 GAACCTGCAGTCTTCCGCCT 62.456 60.000 13.81 0.00 0.00 5.52
338 362 2.383527 CGAACCTGCAGTCTTCCGC 61.384 63.158 13.81 0.00 0.00 5.54
400 424 2.614057 CGGTTGCTGTCTTTTCTGTCTT 59.386 45.455 0.00 0.00 0.00 3.01
442 466 4.656117 TGCGTGCGATCCGTGTGT 62.656 61.111 0.00 0.00 0.00 3.72
443 467 3.842126 CTGCGTGCGATCCGTGTG 61.842 66.667 0.00 0.00 0.00 3.82
584 609 2.109181 GGAGCGGATTCTTCCCGG 59.891 66.667 0.00 0.00 46.55 5.73
590 615 1.617947 GGTCTGGTGGAGCGGATTCT 61.618 60.000 0.00 0.00 32.59 2.40
678 703 2.124996 CACCTCCCTTCCCCCTCA 59.875 66.667 0.00 0.00 0.00 3.86
686 711 2.204306 CCTTCCCCCACCTCCCTT 60.204 66.667 0.00 0.00 0.00 3.95
739 1047 2.743183 GCTGCGGACATAAACCAGAGAT 60.743 50.000 0.00 0.00 0.00 2.75
817 1147 1.202830 AGGCCGTTGATGGTGTGTTAA 60.203 47.619 0.00 0.00 0.00 2.01
1115 1472 1.668101 GCTACACGGTGAGGAGAGGG 61.668 65.000 16.29 0.00 0.00 4.30
1117 1474 1.429825 CGCTACACGGTGAGGAGAG 59.570 63.158 16.29 6.93 38.44 3.20
1144 1501 1.377229 CAAGGTAACGGGGGAGCAA 59.623 57.895 0.00 0.00 46.39 3.91
1178 1537 2.358615 GCCGCATCGCATATCCCA 60.359 61.111 0.00 0.00 0.00 4.37
1235 1594 2.105477 AGGAATACGCATGCTTCTCCAT 59.895 45.455 20.75 8.64 0.00 3.41
1245 1604 2.942376 TCGATTTGCAAGGAATACGCAT 59.058 40.909 0.00 0.00 35.19 4.73
1248 1607 4.318121 GCTACTCGATTTGCAAGGAATACG 60.318 45.833 0.00 1.39 0.00 3.06
1296 1681 1.873591 ACATCCAAACGACAGCAAGTC 59.126 47.619 0.00 0.00 44.02 3.01
1356 1741 7.536622 CAGCAGAAATCAACTAATGAACAAGTC 59.463 37.037 0.00 0.00 42.54 3.01
1390 1776 3.586100 TGACATGCTGCTAACGACTAA 57.414 42.857 0.00 0.00 0.00 2.24
1414 1800 3.785486 CTTCAGCCACATCATAAGACGA 58.215 45.455 0.00 0.00 0.00 4.20
1424 1812 0.178981 ACACCAAGCTTCAGCCACAT 60.179 50.000 0.00 0.00 43.38 3.21
1452 1840 3.640498 TGATCAGAGAAGAGCCCATACTG 59.360 47.826 0.00 0.00 0.00 2.74
1511 1900 5.924475 ACAACTTTTCGGAATAGACACTG 57.076 39.130 13.96 8.28 0.00 3.66
1523 1912 2.290641 AGGCTACTGCAACAACTTTTCG 59.709 45.455 0.00 0.00 41.91 3.46
1532 1921 4.766404 ACAATACAAAGGCTACTGCAAC 57.234 40.909 0.00 0.00 41.91 4.17
1560 1952 8.552034 AGAAAAACAATCTAGACTTCAAACTCG 58.448 33.333 0.00 0.00 0.00 4.18
1646 2065 2.924290 GACTTCTCGGTCTGCACAATAC 59.076 50.000 0.00 0.00 33.81 1.89
1707 2128 3.074412 AGCACACAAGAAAGGTAATCGG 58.926 45.455 0.00 0.00 0.00 4.18
1755 2178 6.324819 ACGAGCATTACATTGGATCAAAAAG 58.675 36.000 0.00 0.00 0.00 2.27
1758 2181 5.295787 GGTACGAGCATTACATTGGATCAAA 59.704 40.000 0.00 0.00 0.00 2.69
1776 2199 5.613329 ACAGAAAACATTGTTAGGGTACGA 58.387 37.500 1.76 0.00 0.00 3.43
1815 2238 1.538950 CTCTTTGCCTTGTCAGCCTTC 59.461 52.381 0.00 0.00 0.00 3.46
1928 2351 8.635765 ATCAAACAGTGCTAAAATAGAAGGAA 57.364 30.769 0.00 0.00 0.00 3.36
2008 2431 3.686726 GCCAGGAGAAATGTACTGAAGTG 59.313 47.826 0.00 0.00 32.86 3.16
2044 2467 8.842358 TTACTAGGTTCAATTCTTTGTGTAGG 57.158 34.615 0.00 0.00 34.32 3.18
2083 2506 8.704668 TGTGTATCTACCAATGACAATCACTAT 58.295 33.333 0.00 0.00 0.00 2.12
2105 2528 2.693074 ACCAAAAGAAAATCGGCTGTGT 59.307 40.909 0.00 0.00 0.00 3.72
2199 2622 4.706035 ACGGTTTATGTCAACCACAGTAA 58.294 39.130 3.61 0.00 45.97 2.24
2381 2804 0.374758 CTGCGAACAATGATGGTCCG 59.625 55.000 0.00 0.00 40.34 4.79
2480 2903 7.654022 TTTTTGAGTTAGAAATCCACAGGTT 57.346 32.000 0.00 0.00 0.00 3.50
2481 2904 7.505585 TGATTTTTGAGTTAGAAATCCACAGGT 59.494 33.333 8.01 0.00 38.42 4.00
2623 3049 9.686683 AAGTTGGATAGTTATGCAAGAGTAATT 57.313 29.630 6.36 0.00 43.18 1.40
2637 3063 6.599638 GGCTAACATTCTCAAGTTGGATAGTT 59.400 38.462 2.34 9.17 0.00 2.24
2643 3069 3.441572 CCAGGCTAACATTCTCAAGTTGG 59.558 47.826 2.34 0.00 0.00 3.77
2801 3231 1.966451 GGGGCCTGTTTCAGACACG 60.966 63.158 0.84 0.00 33.82 4.49
3016 3452 5.694231 TCCACAAAACATGTTCAGATCAG 57.306 39.130 12.39 0.00 41.46 2.90
3069 3505 3.788227 AGGACAATCAGGCAGTACAAA 57.212 42.857 0.00 0.00 0.00 2.83
3143 3579 1.134946 GAACAAGGCAACACACTGCTT 59.865 47.619 0.00 0.00 42.25 3.91
3192 3646 6.647334 TGCCAGTCATCAAATTTAGTTTCA 57.353 33.333 0.00 0.00 0.00 2.69
3193 3647 8.031277 AGAATGCCAGTCATCAAATTTAGTTTC 58.969 33.333 0.00 0.00 33.40 2.78
3202 3656 5.302568 ACTTCAAAGAATGCCAGTCATCAAA 59.697 36.000 0.00 0.00 33.40 2.69
3209 3663 2.694628 TGCAACTTCAAAGAATGCCAGT 59.305 40.909 16.66 0.00 39.69 4.00
3218 3672 3.982701 TGATCGCAATTGCAACTTCAAAG 59.017 39.130 28.77 10.19 42.21 2.77
3272 3734 9.793252 CCTAGATTATGCACCATAATATTTTGC 57.207 33.333 9.69 0.00 44.11 3.68
3277 3739 9.842775 CACATCCTAGATTATGCACCATAATAT 57.157 33.333 9.69 9.47 44.11 1.28
3278 3740 8.267183 CCACATCCTAGATTATGCACCATAATA 58.733 37.037 9.69 0.00 44.11 0.98
3280 3742 6.044287 ACCACATCCTAGATTATGCACCATAA 59.956 38.462 0.00 0.67 40.04 1.90
3281 3743 5.547666 ACCACATCCTAGATTATGCACCATA 59.452 40.000 0.00 0.00 0.00 2.74
3283 3745 3.716353 ACCACATCCTAGATTATGCACCA 59.284 43.478 0.00 0.00 0.00 4.17
3286 3768 5.067674 GCAAAACCACATCCTAGATTATGCA 59.932 40.000 0.00 0.00 0.00 3.96
3288 3770 6.293081 CGAGCAAAACCACATCCTAGATTATG 60.293 42.308 0.00 0.00 0.00 1.90
3294 3776 2.699954 ACGAGCAAAACCACATCCTAG 58.300 47.619 0.00 0.00 0.00 3.02
3298 3780 4.946784 AAGATACGAGCAAAACCACATC 57.053 40.909 0.00 0.00 0.00 3.06
3303 3785 7.514747 CGTTACAGATAAGATACGAGCAAAACC 60.515 40.741 0.00 0.00 0.00 3.27
3304 3786 7.219535 TCGTTACAGATAAGATACGAGCAAAAC 59.780 37.037 0.00 0.00 33.65 2.43
3305 3787 7.219535 GTCGTTACAGATAAGATACGAGCAAAA 59.780 37.037 0.00 0.00 38.50 2.44
3306 3788 6.690098 GTCGTTACAGATAAGATACGAGCAAA 59.310 38.462 0.00 0.00 38.50 3.68
3307 3789 6.197276 GTCGTTACAGATAAGATACGAGCAA 58.803 40.000 0.00 0.00 38.50 3.91
3308 3790 5.557703 CGTCGTTACAGATAAGATACGAGCA 60.558 44.000 0.00 0.00 38.50 4.26
3309 3791 4.839706 CGTCGTTACAGATAAGATACGAGC 59.160 45.833 0.00 0.00 38.50 5.03
3310 3792 6.074409 ACTCGTCGTTACAGATAAGATACGAG 60.074 42.308 16.70 16.70 44.21 4.18
3311 3793 5.750547 ACTCGTCGTTACAGATAAGATACGA 59.249 40.000 0.00 0.00 35.89 3.43
3312 3794 5.972018 ACTCGTCGTTACAGATAAGATACG 58.028 41.667 0.00 0.00 0.00 3.06
3313 3795 7.530190 GCTAACTCGTCGTTACAGATAAGATAC 59.470 40.741 0.00 0.00 37.05 2.24
3314 3796 7.225341 TGCTAACTCGTCGTTACAGATAAGATA 59.775 37.037 0.00 0.00 37.05 1.98
3315 3797 6.037940 TGCTAACTCGTCGTTACAGATAAGAT 59.962 38.462 0.00 0.00 37.05 2.40
3316 3798 5.352293 TGCTAACTCGTCGTTACAGATAAGA 59.648 40.000 0.00 0.00 37.05 2.10
3317 3799 5.566623 TGCTAACTCGTCGTTACAGATAAG 58.433 41.667 0.00 0.00 37.05 1.73
3318 3800 5.352293 TCTGCTAACTCGTCGTTACAGATAA 59.648 40.000 17.25 6.88 39.07 1.75
3319 3801 4.872124 TCTGCTAACTCGTCGTTACAGATA 59.128 41.667 17.25 7.27 39.07 1.98
3320 3802 3.688185 TCTGCTAACTCGTCGTTACAGAT 59.312 43.478 17.25 0.00 39.07 2.90
3321 3803 3.069289 TCTGCTAACTCGTCGTTACAGA 58.931 45.455 17.25 17.25 40.19 3.41
3322 3804 3.124806 TCTCTGCTAACTCGTCGTTACAG 59.875 47.826 15.03 15.03 37.90 2.74
3323 3805 3.069289 TCTCTGCTAACTCGTCGTTACA 58.931 45.455 0.00 0.00 37.05 2.41
3324 3806 3.736530 TCTCTGCTAACTCGTCGTTAC 57.263 47.619 0.00 0.00 37.05 2.50
3325 3807 4.959596 ATTCTCTGCTAACTCGTCGTTA 57.040 40.909 0.00 1.42 37.05 3.18
3326 3808 3.851976 ATTCTCTGCTAACTCGTCGTT 57.148 42.857 0.00 0.00 39.64 3.85
3327 3809 3.851976 AATTCTCTGCTAACTCGTCGT 57.148 42.857 0.00 0.00 0.00 4.34
3328 3810 5.158101 TCTAATTCTCTGCTAACTCGTCG 57.842 43.478 0.00 0.00 0.00 5.12
3329 3811 6.787225 TCTTCTAATTCTCTGCTAACTCGTC 58.213 40.000 0.00 0.00 0.00 4.20
3330 3812 6.761099 TCTTCTAATTCTCTGCTAACTCGT 57.239 37.500 0.00 0.00 0.00 4.18
3331 3813 8.467402 TTTTCTTCTAATTCTCTGCTAACTCG 57.533 34.615 0.00 0.00 0.00 4.18
3347 3829 7.565398 ACCTACATATGGAGCTCTTTTCTTCTA 59.435 37.037 14.64 0.00 0.00 2.10
3349 3831 6.587273 ACCTACATATGGAGCTCTTTTCTTC 58.413 40.000 14.64 0.00 0.00 2.87
3351 3833 7.291182 ACATACCTACATATGGAGCTCTTTTCT 59.709 37.037 14.64 0.00 36.95 2.52
3352 3834 7.445945 ACATACCTACATATGGAGCTCTTTTC 58.554 38.462 14.64 0.00 36.95 2.29
3421 3903 2.900546 GACAGAGAGGGGAGAGTTCAAA 59.099 50.000 0.00 0.00 0.00 2.69
3431 3913 3.775654 GGTGCGGACAGAGAGGGG 61.776 72.222 9.96 0.00 0.00 4.79
3437 3919 1.596934 GATCAAGGGTGCGGACAGA 59.403 57.895 9.96 1.15 0.00 3.41
3440 3922 1.810030 GTCGATCAAGGGTGCGGAC 60.810 63.158 0.00 0.00 0.00 4.79
3443 3935 2.158959 GTCGTCGATCAAGGGTGCG 61.159 63.158 0.00 0.00 0.00 5.34
3451 3943 4.055360 AGTGAAAACAATGTCGTCGATCA 58.945 39.130 0.00 0.00 0.00 2.92
3459 3951 3.245990 GGCAGCAAAGTGAAAACAATGTC 59.754 43.478 0.00 0.00 0.00 3.06
3460 3952 3.197265 GGCAGCAAAGTGAAAACAATGT 58.803 40.909 0.00 0.00 0.00 2.71
3461 3953 3.001533 GTGGCAGCAAAGTGAAAACAATG 59.998 43.478 0.00 0.00 0.00 2.82
3462 3954 3.197265 GTGGCAGCAAAGTGAAAACAAT 58.803 40.909 0.00 0.00 0.00 2.71
3463 3955 2.615869 GTGGCAGCAAAGTGAAAACAA 58.384 42.857 0.00 0.00 0.00 2.83
3465 3957 1.136891 AGGTGGCAGCAAAGTGAAAAC 59.863 47.619 20.04 0.00 0.00 2.43
3466 3958 1.484038 AGGTGGCAGCAAAGTGAAAA 58.516 45.000 20.04 0.00 0.00 2.29
3468 3960 1.142870 ACTAGGTGGCAGCAAAGTGAA 59.857 47.619 20.04 0.00 0.00 3.18
3472 3964 2.744202 CAAGTACTAGGTGGCAGCAAAG 59.256 50.000 20.04 17.11 0.00 2.77
3473 3965 2.778299 CAAGTACTAGGTGGCAGCAAA 58.222 47.619 20.04 5.51 0.00 3.68
3474 3966 1.610624 GCAAGTACTAGGTGGCAGCAA 60.611 52.381 20.04 0.00 0.00 3.91
3475 3967 0.036388 GCAAGTACTAGGTGGCAGCA 60.036 55.000 20.04 4.11 0.00 4.41
3476 3968 0.744771 GGCAAGTACTAGGTGGCAGC 60.745 60.000 9.02 9.02 37.73 5.25
3477 3969 0.460284 CGGCAAGTACTAGGTGGCAG 60.460 60.000 16.95 8.14 37.67 4.85
3478 3970 0.901114 TCGGCAAGTACTAGGTGGCA 60.901 55.000 16.95 4.68 37.67 4.92
3479 3971 0.248289 TTCGGCAAGTACTAGGTGGC 59.752 55.000 9.06 9.06 34.67 5.01
3480 3972 1.405121 GGTTCGGCAAGTACTAGGTGG 60.405 57.143 0.00 0.00 0.00 4.61
3488 3980 0.323629 CCAAGGAGGTTCGGCAAGTA 59.676 55.000 0.00 0.00 0.00 2.24
3511 4003 4.160626 AGGCAGACTTCTTAACGATAGCTT 59.839 41.667 0.00 0.00 42.67 3.74
3512 4004 3.702045 AGGCAGACTTCTTAACGATAGCT 59.298 43.478 0.00 0.00 42.67 3.32
3536 4028 2.172505 TGAACTGTTGAAGCCTCCAAGA 59.827 45.455 0.00 0.00 0.00 3.02
3539 4031 2.092429 AGTTGAACTGTTGAAGCCTCCA 60.092 45.455 0.00 0.00 0.00 3.86
3540 4032 2.576615 AGTTGAACTGTTGAAGCCTCC 58.423 47.619 0.00 0.00 0.00 4.30
3541 4033 4.632153 TCTAGTTGAACTGTTGAAGCCTC 58.368 43.478 8.33 0.00 0.00 4.70
3542 4034 4.689612 TCTAGTTGAACTGTTGAAGCCT 57.310 40.909 8.33 0.00 0.00 4.58
3553 4045 4.377124 GCCGTAGCAAAGTTCTAGTTGAAC 60.377 45.833 9.14 9.14 45.89 3.18
3554 4046 3.744426 GCCGTAGCAAAGTTCTAGTTGAA 59.256 43.478 0.00 0.00 39.53 2.69
3555 4047 3.006537 AGCCGTAGCAAAGTTCTAGTTGA 59.993 43.478 0.00 0.00 43.56 3.18
3556 4048 3.326747 AGCCGTAGCAAAGTTCTAGTTG 58.673 45.455 0.00 0.00 43.56 3.16
3557 4049 3.679824 AGCCGTAGCAAAGTTCTAGTT 57.320 42.857 0.00 0.00 43.56 2.24
3558 4050 3.427233 CGTAGCCGTAGCAAAGTTCTAGT 60.427 47.826 0.00 0.00 43.56 2.57
3559 4051 3.106672 CGTAGCCGTAGCAAAGTTCTAG 58.893 50.000 0.00 0.00 43.56 2.43
3560 4052 2.159338 CCGTAGCCGTAGCAAAGTTCTA 60.159 50.000 0.00 0.00 43.56 2.10
3561 4053 1.403780 CCGTAGCCGTAGCAAAGTTCT 60.404 52.381 0.00 0.00 43.56 3.01
3562 4054 0.997196 CCGTAGCCGTAGCAAAGTTC 59.003 55.000 0.00 0.00 43.56 3.01
3563 4055 0.390735 CCCGTAGCCGTAGCAAAGTT 60.391 55.000 0.00 0.00 43.56 2.66
3564 4056 1.217244 CCCGTAGCCGTAGCAAAGT 59.783 57.895 0.00 0.00 43.56 2.66
3565 4057 2.171725 GCCCGTAGCCGTAGCAAAG 61.172 63.158 0.00 0.00 43.56 2.77
3566 4058 2.125431 GCCCGTAGCCGTAGCAAA 60.125 61.111 0.00 0.00 43.56 3.68
3567 4059 3.365291 CTGCCCGTAGCCGTAGCAA 62.365 63.158 0.00 0.00 43.56 3.91
3568 4060 3.833645 CTGCCCGTAGCCGTAGCA 61.834 66.667 0.00 0.00 43.56 3.49
3569 4061 2.847435 AAACTGCCCGTAGCCGTAGC 62.847 60.000 0.00 0.00 38.05 3.58
3570 4062 0.804933 GAAACTGCCCGTAGCCGTAG 60.805 60.000 0.00 0.00 38.05 3.51
3571 4063 1.216178 GAAACTGCCCGTAGCCGTA 59.784 57.895 0.00 0.00 38.05 4.02
3572 4064 1.252904 TAGAAACTGCCCGTAGCCGT 61.253 55.000 0.00 0.00 41.19 5.68
3573 4065 0.804933 GTAGAAACTGCCCGTAGCCG 60.805 60.000 0.00 0.00 42.71 5.52
3574 4066 0.804933 CGTAGAAACTGCCCGTAGCC 60.805 60.000 0.00 0.00 42.71 3.93
3575 4067 0.804933 CCGTAGAAACTGCCCGTAGC 60.805 60.000 0.00 0.00 44.14 3.58
3576 4068 0.813184 TCCGTAGAAACTGCCCGTAG 59.187 55.000 0.00 0.00 0.00 3.51
3577 4069 1.255882 TTCCGTAGAAACTGCCCGTA 58.744 50.000 0.00 0.00 0.00 4.02
3578 4070 0.393820 TTTCCGTAGAAACTGCCCGT 59.606 50.000 0.00 0.00 37.07 5.28
3579 4071 1.076332 CTTTCCGTAGAAACTGCCCG 58.924 55.000 0.00 0.00 37.07 6.13
3580 4072 1.804748 CACTTTCCGTAGAAACTGCCC 59.195 52.381 0.00 0.00 37.07 5.36
3581 4073 2.490991 ACACTTTCCGTAGAAACTGCC 58.509 47.619 0.00 0.00 37.07 4.85
3582 4074 4.547406 AAACACTTTCCGTAGAAACTGC 57.453 40.909 0.00 0.00 37.07 4.40
3583 4075 5.332808 CCGTAAACACTTTCCGTAGAAACTG 60.333 44.000 0.00 0.00 37.07 3.16
3584 4076 4.746611 CCGTAAACACTTTCCGTAGAAACT 59.253 41.667 0.00 0.00 37.07 2.66
3585 4077 4.744631 TCCGTAAACACTTTCCGTAGAAAC 59.255 41.667 0.00 0.00 37.07 2.78
3586 4078 4.942852 TCCGTAAACACTTTCCGTAGAAA 58.057 39.130 0.00 0.00 39.70 2.52
3587 4079 4.278170 TCTCCGTAAACACTTTCCGTAGAA 59.722 41.667 0.00 0.00 0.00 2.10
3588 4080 3.820467 TCTCCGTAAACACTTTCCGTAGA 59.180 43.478 0.00 0.00 0.00 2.59
3589 4081 4.164822 TCTCCGTAAACACTTTCCGTAG 57.835 45.455 0.00 0.00 0.00 3.51
3590 4082 4.218200 TCATCTCCGTAAACACTTTCCGTA 59.782 41.667 0.00 0.00 0.00 4.02
3591 4083 3.006110 TCATCTCCGTAAACACTTTCCGT 59.994 43.478 0.00 0.00 0.00 4.69
3592 4084 3.581755 TCATCTCCGTAAACACTTTCCG 58.418 45.455 0.00 0.00 0.00 4.30
3593 4085 3.371285 GCTCATCTCCGTAAACACTTTCC 59.629 47.826 0.00 0.00 0.00 3.13
3594 4086 4.092091 CAGCTCATCTCCGTAAACACTTTC 59.908 45.833 0.00 0.00 0.00 2.62
3595 4087 3.997021 CAGCTCATCTCCGTAAACACTTT 59.003 43.478 0.00 0.00 0.00 2.66
3596 4088 3.589988 CAGCTCATCTCCGTAAACACTT 58.410 45.455 0.00 0.00 0.00 3.16
3597 4089 2.093973 CCAGCTCATCTCCGTAAACACT 60.094 50.000 0.00 0.00 0.00 3.55
3598 4090 2.094182 TCCAGCTCATCTCCGTAAACAC 60.094 50.000 0.00 0.00 0.00 3.32
3599 4091 2.166459 CTCCAGCTCATCTCCGTAAACA 59.834 50.000 0.00 0.00 0.00 2.83
3600 4092 2.427453 TCTCCAGCTCATCTCCGTAAAC 59.573 50.000 0.00 0.00 0.00 2.01
3601 4093 2.427453 GTCTCCAGCTCATCTCCGTAAA 59.573 50.000 0.00 0.00 0.00 2.01
3602 4094 2.025155 GTCTCCAGCTCATCTCCGTAA 58.975 52.381 0.00 0.00 0.00 3.18
3603 4095 1.681538 GTCTCCAGCTCATCTCCGTA 58.318 55.000 0.00 0.00 0.00 4.02
3604 4096 1.040339 GGTCTCCAGCTCATCTCCGT 61.040 60.000 0.00 0.00 0.00 4.69
3605 4097 0.754957 AGGTCTCCAGCTCATCTCCG 60.755 60.000 0.00 0.00 0.00 4.63
3606 4098 2.238521 CTAGGTCTCCAGCTCATCTCC 58.761 57.143 0.00 0.00 0.00 3.71
3607 4099 2.158534 TCCTAGGTCTCCAGCTCATCTC 60.159 54.545 9.08 0.00 0.00 2.75
3608 4100 1.856259 TCCTAGGTCTCCAGCTCATCT 59.144 52.381 9.08 0.00 0.00 2.90
3609 4101 2.373335 TCCTAGGTCTCCAGCTCATC 57.627 55.000 9.08 0.00 0.00 2.92
3610 4102 3.238597 GAATCCTAGGTCTCCAGCTCAT 58.761 50.000 9.08 0.00 0.00 2.90
3611 4103 2.023984 TGAATCCTAGGTCTCCAGCTCA 60.024 50.000 9.08 0.00 0.00 4.26
3612 4104 2.672098 TGAATCCTAGGTCTCCAGCTC 58.328 52.381 9.08 0.00 0.00 4.09
3613 4105 2.856760 TGAATCCTAGGTCTCCAGCT 57.143 50.000 9.08 0.00 0.00 4.24
3614 4106 2.968574 TGATGAATCCTAGGTCTCCAGC 59.031 50.000 9.08 6.59 0.00 4.85
3615 4107 3.963374 TGTGATGAATCCTAGGTCTCCAG 59.037 47.826 9.08 0.00 0.00 3.86
3616 4108 3.994317 TGTGATGAATCCTAGGTCTCCA 58.006 45.455 9.08 3.66 0.00 3.86
3617 4109 4.407296 AGTTGTGATGAATCCTAGGTCTCC 59.593 45.833 9.08 0.00 0.00 3.71
3618 4110 5.606348 AGTTGTGATGAATCCTAGGTCTC 57.394 43.478 9.08 7.26 0.00 3.36
3619 4111 5.338708 CCAAGTTGTGATGAATCCTAGGTCT 60.339 44.000 9.08 0.00 0.00 3.85
3620 4112 4.878397 CCAAGTTGTGATGAATCCTAGGTC 59.122 45.833 9.08 0.00 0.00 3.85
3621 4113 4.324563 CCCAAGTTGTGATGAATCCTAGGT 60.325 45.833 9.08 0.00 0.00 3.08
3622 4114 4.202441 CCCAAGTTGTGATGAATCCTAGG 58.798 47.826 0.82 0.82 0.00 3.02
3623 4115 4.848357 ACCCAAGTTGTGATGAATCCTAG 58.152 43.478 1.45 0.00 0.00 3.02
3624 4116 4.324254 GGACCCAAGTTGTGATGAATCCTA 60.324 45.833 1.45 0.00 0.00 2.94
3625 4117 3.562176 GGACCCAAGTTGTGATGAATCCT 60.562 47.826 1.45 0.00 0.00 3.24
3626 4118 2.755103 GGACCCAAGTTGTGATGAATCC 59.245 50.000 1.45 0.00 0.00 3.01
3627 4119 2.755103 GGGACCCAAGTTGTGATGAATC 59.245 50.000 5.33 0.00 0.00 2.52
3628 4120 2.109834 TGGGACCCAAGTTGTGATGAAT 59.890 45.455 12.05 0.00 0.00 2.57
3629 4121 1.496857 TGGGACCCAAGTTGTGATGAA 59.503 47.619 12.05 0.00 0.00 2.57
3630 4122 1.144691 TGGGACCCAAGTTGTGATGA 58.855 50.000 12.05 0.00 0.00 2.92
3631 4123 1.247567 GTGGGACCCAAGTTGTGATG 58.752 55.000 16.98 0.00 34.18 3.07
3632 4124 0.850100 TGTGGGACCCAAGTTGTGAT 59.150 50.000 16.98 0.00 34.18 3.06
3633 4125 0.182537 CTGTGGGACCCAAGTTGTGA 59.817 55.000 16.98 0.00 34.18 3.58
3634 4126 1.455383 GCTGTGGGACCCAAGTTGTG 61.455 60.000 16.98 3.16 34.18 3.33
3635 4127 1.152756 GCTGTGGGACCCAAGTTGT 60.153 57.895 16.98 0.00 34.18 3.32
3636 4128 0.400213 TAGCTGTGGGACCCAAGTTG 59.600 55.000 16.98 6.86 34.18 3.16
3637 4129 1.145571 TTAGCTGTGGGACCCAAGTT 58.854 50.000 16.98 14.82 34.18 2.66
3638 4130 0.400594 GTTAGCTGTGGGACCCAAGT 59.599 55.000 16.98 2.40 34.18 3.16
3639 4131 0.693049 AGTTAGCTGTGGGACCCAAG 59.307 55.000 16.98 15.65 34.18 3.61
3640 4132 1.145571 AAGTTAGCTGTGGGACCCAA 58.854 50.000 16.98 4.97 34.18 4.12
3641 4133 1.145571 AAAGTTAGCTGTGGGACCCA 58.854 50.000 9.95 9.95 0.00 4.51
3642 4134 3.279434 CATAAAGTTAGCTGTGGGACCC 58.721 50.000 2.45 2.45 0.00 4.46
3643 4135 3.279434 CCATAAAGTTAGCTGTGGGACC 58.721 50.000 0.00 0.00 0.00 4.46
3644 4136 3.279434 CCCATAAAGTTAGCTGTGGGAC 58.721 50.000 15.64 0.00 41.47 4.46
3645 4137 2.241176 CCCCATAAAGTTAGCTGTGGGA 59.759 50.000 19.96 0.00 41.47 4.37
3646 4138 2.241176 TCCCCATAAAGTTAGCTGTGGG 59.759 50.000 14.40 14.40 40.00 4.61
3647 4139 3.199946 TCTCCCCATAAAGTTAGCTGTGG 59.800 47.826 0.00 0.64 0.00 4.17
3648 4140 4.487714 TCTCCCCATAAAGTTAGCTGTG 57.512 45.455 0.00 0.00 0.00 3.66
3649 4141 5.514500 TTTCTCCCCATAAAGTTAGCTGT 57.486 39.130 0.00 0.00 0.00 4.40
3650 4142 6.603201 TGATTTTCTCCCCATAAAGTTAGCTG 59.397 38.462 0.00 0.00 0.00 4.24
3651 4143 6.731467 TGATTTTCTCCCCATAAAGTTAGCT 58.269 36.000 0.00 0.00 0.00 3.32
3652 4144 7.404671 TTGATTTTCTCCCCATAAAGTTAGC 57.595 36.000 0.00 0.00 0.00 3.09
3653 4145 7.922811 GCATTGATTTTCTCCCCATAAAGTTAG 59.077 37.037 0.00 0.00 0.00 2.34
3654 4146 7.147742 GGCATTGATTTTCTCCCCATAAAGTTA 60.148 37.037 0.00 0.00 0.00 2.24
3655 4147 6.352137 GGCATTGATTTTCTCCCCATAAAGTT 60.352 38.462 0.00 0.00 0.00 2.66
3656 4148 5.129320 GGCATTGATTTTCTCCCCATAAAGT 59.871 40.000 0.00 0.00 0.00 2.66
3657 4149 5.453762 GGGCATTGATTTTCTCCCCATAAAG 60.454 44.000 0.00 0.00 0.00 1.85
3658 4150 4.408596 GGGCATTGATTTTCTCCCCATAAA 59.591 41.667 0.00 0.00 0.00 1.40
3659 4151 3.966665 GGGCATTGATTTTCTCCCCATAA 59.033 43.478 0.00 0.00 0.00 1.90
3660 4152 3.575805 GGGCATTGATTTTCTCCCCATA 58.424 45.455 0.00 0.00 0.00 2.74
3661 4153 2.401568 GGGCATTGATTTTCTCCCCAT 58.598 47.619 0.00 0.00 0.00 4.00
3662 4154 1.864669 GGGCATTGATTTTCTCCCCA 58.135 50.000 0.00 0.00 0.00 4.96
3663 4155 0.746659 CGGGCATTGATTTTCTCCCC 59.253 55.000 0.00 0.00 0.00 4.81
3664 4156 1.474330 ACGGGCATTGATTTTCTCCC 58.526 50.000 0.00 0.00 0.00 4.30
3665 4157 3.065371 CACTACGGGCATTGATTTTCTCC 59.935 47.826 0.00 0.00 0.00 3.71
3666 4158 3.065371 CCACTACGGGCATTGATTTTCTC 59.935 47.826 0.00 0.00 0.00 2.87
3667 4159 3.016736 CCACTACGGGCATTGATTTTCT 58.983 45.455 0.00 0.00 0.00 2.52
3668 4160 3.420839 CCACTACGGGCATTGATTTTC 57.579 47.619 0.00 0.00 0.00 2.29
3680 4172 4.159879 AGACTTACAGAAATCCCACTACGG 59.840 45.833 0.00 0.00 0.00 4.02
3681 4173 5.326200 AGACTTACAGAAATCCCACTACG 57.674 43.478 0.00 0.00 0.00 3.51
3682 4174 6.127423 TGCTAGACTTACAGAAATCCCACTAC 60.127 42.308 0.00 0.00 0.00 2.73
3683 4175 5.955959 TGCTAGACTTACAGAAATCCCACTA 59.044 40.000 0.00 0.00 0.00 2.74
3684 4176 4.777896 TGCTAGACTTACAGAAATCCCACT 59.222 41.667 0.00 0.00 0.00 4.00
3685 4177 5.086104 TGCTAGACTTACAGAAATCCCAC 57.914 43.478 0.00 0.00 0.00 4.61
3686 4178 5.957771 ATGCTAGACTTACAGAAATCCCA 57.042 39.130 0.00 0.00 0.00 4.37
3687 4179 7.475840 CAAAATGCTAGACTTACAGAAATCCC 58.524 38.462 0.00 0.00 0.00 3.85
3688 4180 6.969473 GCAAAATGCTAGACTTACAGAAATCC 59.031 38.462 0.00 0.00 40.96 3.01
3689 4181 7.961325 GCAAAATGCTAGACTTACAGAAATC 57.039 36.000 0.00 0.00 40.96 2.17
3705 4197 1.134610 AGCATAGCCCAAGCAAAATGC 60.135 47.619 10.29 10.29 45.14 3.56
3706 4198 2.973694 AGCATAGCCCAAGCAAAATG 57.026 45.000 0.00 0.00 43.56 2.32
3707 4199 3.254166 CGATAGCATAGCCCAAGCAAAAT 59.746 43.478 0.00 0.00 43.56 1.82
3708 4200 2.618241 CGATAGCATAGCCCAAGCAAAA 59.382 45.455 0.00 0.00 43.56 2.44
3709 4201 2.221169 CGATAGCATAGCCCAAGCAAA 58.779 47.619 0.00 0.00 43.56 3.68
3710 4202 1.140852 ACGATAGCATAGCCCAAGCAA 59.859 47.619 0.00 0.00 40.81 3.91
3711 4203 0.758734 ACGATAGCATAGCCCAAGCA 59.241 50.000 0.00 0.00 40.81 3.91
3712 4204 1.884235 AACGATAGCATAGCCCAAGC 58.116 50.000 0.00 0.00 42.67 4.01
3713 4205 3.206150 ACAAACGATAGCATAGCCCAAG 58.794 45.455 0.00 0.00 42.67 3.61
3714 4206 3.275617 ACAAACGATAGCATAGCCCAA 57.724 42.857 0.00 0.00 42.67 4.12
3715 4207 3.202906 GAACAAACGATAGCATAGCCCA 58.797 45.455 0.00 0.00 42.67 5.36
3716 4208 2.548480 GGAACAAACGATAGCATAGCCC 59.452 50.000 0.00 0.00 42.67 5.19
3717 4209 3.002348 GTGGAACAAACGATAGCATAGCC 59.998 47.826 0.00 0.00 44.16 3.93
3718 4210 3.002348 GGTGGAACAAACGATAGCATAGC 59.998 47.826 0.00 0.00 44.16 2.97
3719 4211 3.560068 GGGTGGAACAAACGATAGCATAG 59.440 47.826 0.00 0.00 44.16 2.23
3720 4212 3.537580 GGGTGGAACAAACGATAGCATA 58.462 45.455 0.00 0.00 44.16 3.14
3721 4213 2.365582 GGGTGGAACAAACGATAGCAT 58.634 47.619 0.00 0.00 44.16 3.79
3722 4214 1.612199 GGGGTGGAACAAACGATAGCA 60.612 52.381 0.00 0.00 44.16 3.49
3723 4215 1.092348 GGGGTGGAACAAACGATAGC 58.908 55.000 0.00 0.00 44.16 2.97
3724 4216 1.365699 CGGGGTGGAACAAACGATAG 58.634 55.000 0.00 0.00 44.16 2.08
3725 4217 0.036199 CCGGGGTGGAACAAACGATA 60.036 55.000 0.00 0.00 44.16 2.92
3726 4218 1.302993 CCGGGGTGGAACAAACGAT 60.303 57.895 0.00 0.00 44.16 3.73
3727 4219 2.111460 CCGGGGTGGAACAAACGA 59.889 61.111 0.00 0.00 44.16 3.85
3728 4220 2.111460 TCCGGGGTGGAACAAACG 59.889 61.111 0.00 0.00 46.38 3.60
3736 4228 2.268920 CAGTGTGATCCGGGGTGG 59.731 66.667 0.00 0.00 40.09 4.61
3737 4229 2.268920 CCAGTGTGATCCGGGGTG 59.731 66.667 0.00 0.00 0.00 4.61
3738 4230 3.717294 GCCAGTGTGATCCGGGGT 61.717 66.667 0.00 0.00 0.00 4.95
3739 4231 3.716195 TGCCAGTGTGATCCGGGG 61.716 66.667 0.00 0.00 0.00 5.73
3740 4232 2.436646 GTGCCAGTGTGATCCGGG 60.437 66.667 0.00 0.00 0.00 5.73
3741 4233 2.815211 CGTGCCAGTGTGATCCGG 60.815 66.667 0.00 0.00 0.00 5.14
3742 4234 2.094659 GTCGTGCCAGTGTGATCCG 61.095 63.158 0.00 0.00 0.00 4.18
3743 4235 1.005037 TGTCGTGCCAGTGTGATCC 60.005 57.895 0.00 0.00 0.00 3.36
3744 4236 1.617755 CGTGTCGTGCCAGTGTGATC 61.618 60.000 0.00 0.00 0.00 2.92
3745 4237 1.664649 CGTGTCGTGCCAGTGTGAT 60.665 57.895 0.00 0.00 0.00 3.06
3746 4238 2.279186 CGTGTCGTGCCAGTGTGA 60.279 61.111 0.00 0.00 0.00 3.58
3747 4239 2.279186 TCGTGTCGTGCCAGTGTG 60.279 61.111 0.00 0.00 0.00 3.82
3748 4240 2.027605 CTCGTGTCGTGCCAGTGT 59.972 61.111 0.00 0.00 0.00 3.55
3749 4241 2.027605 ACTCGTGTCGTGCCAGTG 59.972 61.111 0.00 0.00 0.00 3.66
3750 4242 2.027605 CACTCGTGTCGTGCCAGT 59.972 61.111 0.00 0.00 0.00 4.00
3762 4254 2.092211 GCTACATTTGGTCGAACACTCG 59.908 50.000 0.44 0.00 46.87 4.18
3763 4255 2.092211 CGCTACATTTGGTCGAACACTC 59.908 50.000 0.44 0.00 0.00 3.51
3764 4256 2.066262 CGCTACATTTGGTCGAACACT 58.934 47.619 0.44 0.00 0.00 3.55
3765 4257 1.127951 CCGCTACATTTGGTCGAACAC 59.872 52.381 0.44 0.00 0.00 3.32
3766 4258 1.001068 TCCGCTACATTTGGTCGAACA 59.999 47.619 0.00 0.00 0.00 3.18
3767 4259 1.717194 TCCGCTACATTTGGTCGAAC 58.283 50.000 0.00 0.00 0.00 3.95
3768 4260 2.459060 TTCCGCTACATTTGGTCGAA 57.541 45.000 0.00 0.00 0.00 3.71
3769 4261 2.276201 CATTCCGCTACATTTGGTCGA 58.724 47.619 0.00 0.00 0.00 4.20
3771 4263 1.742831 TGCATTCCGCTACATTTGGTC 59.257 47.619 0.00 0.00 43.06 4.02
3773 4265 2.358582 TGATGCATTCCGCTACATTTGG 59.641 45.455 0.00 0.00 43.06 3.28
3774 4266 3.696281 TGATGCATTCCGCTACATTTG 57.304 42.857 0.00 0.00 43.06 2.32
3775 4267 3.696051 ACTTGATGCATTCCGCTACATTT 59.304 39.130 0.00 0.00 43.06 2.32
3776 4268 3.282021 ACTTGATGCATTCCGCTACATT 58.718 40.909 0.00 0.00 43.06 2.71
3777 4269 2.923121 ACTTGATGCATTCCGCTACAT 58.077 42.857 0.00 0.00 43.06 2.29
3778 4270 2.401583 ACTTGATGCATTCCGCTACA 57.598 45.000 0.00 0.00 43.06 2.74
3779 4271 2.677836 TCAACTTGATGCATTCCGCTAC 59.322 45.455 0.00 0.00 43.06 3.58
3780 4272 2.984562 TCAACTTGATGCATTCCGCTA 58.015 42.857 0.00 0.00 43.06 4.26
3781 4273 1.825090 TCAACTTGATGCATTCCGCT 58.175 45.000 0.00 0.00 43.06 5.52
3782 4274 2.095059 ACTTCAACTTGATGCATTCCGC 60.095 45.455 0.00 0.00 42.89 5.54
3783 4275 3.837213 ACTTCAACTTGATGCATTCCG 57.163 42.857 0.00 0.00 0.00 4.30
3784 4276 6.363357 GTGTTTACTTCAACTTGATGCATTCC 59.637 38.462 0.00 0.00 0.00 3.01
3785 4277 6.086765 CGTGTTTACTTCAACTTGATGCATTC 59.913 38.462 0.00 0.00 0.00 2.67
3786 4278 5.914635 CGTGTTTACTTCAACTTGATGCATT 59.085 36.000 0.00 0.00 0.00 3.56
3787 4279 5.238432 TCGTGTTTACTTCAACTTGATGCAT 59.762 36.000 0.00 0.00 0.00 3.96
3788 4280 4.572795 TCGTGTTTACTTCAACTTGATGCA 59.427 37.500 0.00 0.00 0.00 3.96
3789 4281 5.090652 TCGTGTTTACTTCAACTTGATGC 57.909 39.130 4.89 0.00 0.00 3.91
3790 4282 6.079763 CCATCGTGTTTACTTCAACTTGATG 58.920 40.000 3.65 3.65 37.98 3.07
3800 4292 3.308438 ACGTAGCCATCGTGTTTACTT 57.692 42.857 0.00 0.00 40.07 2.24
3825 4317 7.014518 TCACACAACAATTCATCCTCTTTCATT 59.985 33.333 0.00 0.00 0.00 2.57
3827 4319 5.827267 TCACACAACAATTCATCCTCTTTCA 59.173 36.000 0.00 0.00 0.00 2.69
3828 4320 6.317789 TCACACAACAATTCATCCTCTTTC 57.682 37.500 0.00 0.00 0.00 2.62
3844 4336 4.013050 TGAAACTTCCACACATCACACAA 58.987 39.130 0.00 0.00 0.00 3.33
3860 4352 1.609208 ATGCTTCGTGGCTTGAAACT 58.391 45.000 4.36 0.00 0.00 2.66
3869 4361 0.734309 TGCTGCATTATGCTTCGTGG 59.266 50.000 18.44 3.28 45.31 4.94
3880 4372 2.550606 CACTTTGCCAAATTGCTGCATT 59.449 40.909 1.84 0.00 34.51 3.56
3881 4373 2.147958 CACTTTGCCAAATTGCTGCAT 58.852 42.857 1.84 0.00 34.51 3.96
3882 4374 1.134461 ACACTTTGCCAAATTGCTGCA 60.134 42.857 7.36 0.00 0.00 4.41
3883 4375 1.262151 CACACTTTGCCAAATTGCTGC 59.738 47.619 7.36 0.00 0.00 5.25
3884 4376 1.262151 GCACACTTTGCCAAATTGCTG 59.738 47.619 7.36 6.59 46.63 4.41
3885 4377 1.585297 GCACACTTTGCCAAATTGCT 58.415 45.000 7.36 0.00 46.63 3.91
3921 4413 0.307760 AAGCTGTGTAGTGTTTGCGC 59.692 50.000 0.00 0.00 0.00 6.09
3923 4415 2.798283 TCGTAAGCTGTGTAGTGTTTGC 59.202 45.455 0.00 0.00 37.18 3.68
3927 4419 3.936372 ATGTCGTAAGCTGTGTAGTGT 57.064 42.857 0.00 0.00 37.18 3.55
3954 4446 5.999205 ACCTCTGTCCATGATCATAGATC 57.001 43.478 8.15 2.76 0.00 2.75
3955 4447 5.719085 GGTACCTCTGTCCATGATCATAGAT 59.281 44.000 8.15 0.00 0.00 1.98
3956 4448 5.080337 GGTACCTCTGTCCATGATCATAGA 58.920 45.833 8.15 3.40 0.00 1.98
3957 4449 5.047448 CAGGTACCTCTGTCCATGATCATAG 60.047 48.000 12.84 0.41 0.00 2.23
3958 4450 4.835056 CAGGTACCTCTGTCCATGATCATA 59.165 45.833 12.84 0.00 0.00 2.15
3959 4451 3.645212 CAGGTACCTCTGTCCATGATCAT 59.355 47.826 12.84 1.18 0.00 2.45
3972 4464 0.846693 ATCAATGGGGCAGGTACCTC 59.153 55.000 12.84 7.13 0.00 3.85
3974 4466 0.468029 CCATCAATGGGGCAGGTACC 60.468 60.000 2.73 2.73 44.31 3.34
3975 4467 3.116091 CCATCAATGGGGCAGGTAC 57.884 57.895 0.75 0.00 44.31 3.34
3992 4484 2.230266 ACGGCATTTTGAATGGTGTACC 59.770 45.455 3.16 0.00 0.00 3.34
3993 4485 3.057876 TGACGGCATTTTGAATGGTGTAC 60.058 43.478 0.00 0.00 0.00 2.90
3994 4486 3.149981 TGACGGCATTTTGAATGGTGTA 58.850 40.909 0.00 0.00 0.00 2.90
3996 4488 2.721274 TGACGGCATTTTGAATGGTG 57.279 45.000 0.00 0.00 0.00 4.17
3997 4489 2.363680 TGTTGACGGCATTTTGAATGGT 59.636 40.909 0.00 0.00 0.00 3.55
3998 4490 3.023946 TGTTGACGGCATTTTGAATGG 57.976 42.857 0.00 0.00 0.00 3.16
3999 4491 4.050553 ACTTGTTGACGGCATTTTGAATG 58.949 39.130 0.00 0.00 0.00 2.67
4000 4492 4.320608 ACTTGTTGACGGCATTTTGAAT 57.679 36.364 0.00 0.00 0.00 2.57
4001 4493 3.791973 ACTTGTTGACGGCATTTTGAA 57.208 38.095 0.00 0.00 0.00 2.69
4002 4494 5.009110 TCAATACTTGTTGACGGCATTTTGA 59.991 36.000 0.00 0.00 33.41 2.69
4005 4497 5.009610 ACTTCAATACTTGTTGACGGCATTT 59.990 36.000 0.00 0.00 37.80 2.32
4006 4498 4.518970 ACTTCAATACTTGTTGACGGCATT 59.481 37.500 0.00 0.00 37.80 3.56
4007 4499 4.072131 ACTTCAATACTTGTTGACGGCAT 58.928 39.130 0.00 0.00 37.80 4.40
4008 4500 3.249799 CACTTCAATACTTGTTGACGGCA 59.750 43.478 0.00 0.00 37.80 5.69
4009 4501 3.250040 ACACTTCAATACTTGTTGACGGC 59.750 43.478 0.00 0.00 37.80 5.68
4010 4502 4.272504 ACACACTTCAATACTTGTTGACGG 59.727 41.667 0.00 0.00 37.80 4.79
4011 4503 5.197549 CACACACTTCAATACTTGTTGACG 58.802 41.667 0.00 0.00 37.80 4.35
4012 4504 5.965334 CACACACACTTCAATACTTGTTGAC 59.035 40.000 0.00 0.00 37.80 3.18
4013 4505 5.448496 GCACACACACTTCAATACTTGTTGA 60.448 40.000 0.00 0.00 36.38 3.18
4014 4506 4.734854 GCACACACACTTCAATACTTGTTG 59.265 41.667 0.00 0.00 0.00 3.33
4015 4507 4.397730 TGCACACACACTTCAATACTTGTT 59.602 37.500 0.00 0.00 0.00 2.83
4016 4508 3.944650 TGCACACACACTTCAATACTTGT 59.055 39.130 0.00 0.00 0.00 3.16
4061 4553 3.182572 CGGAAACTTGTGAACTCTTCGAG 59.817 47.826 0.00 0.00 35.52 4.04
4062 4554 3.120792 CGGAAACTTGTGAACTCTTCGA 58.879 45.455 0.00 0.00 0.00 3.71
4070 4563 3.013921 AGCAAGAACGGAAACTTGTGAA 58.986 40.909 0.00 0.00 43.41 3.18
4076 4569 1.680338 AAGCAGCAAGAACGGAAACT 58.320 45.000 0.00 0.00 0.00 2.66
4081 4574 2.226437 ACACATAAAGCAGCAAGAACGG 59.774 45.455 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.